ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart53e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete... 50 0.007
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
3dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
4dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
5ref|XM_480901.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.41
6gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.41
8gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 geno... 44 0.41
9gb|AY033092.1| Burkholderia sacchari prp gene cluster, complete ... 44 0.41
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
13gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
14dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
15dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
16ref|NM_188968.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
17gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.6
18ref|XM_675989.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.6
19emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
20gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.6
21dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
22dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
23dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
24dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25dbj|AK105810.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
26gb|AY107198.1| Zea mays PCO093409 mRNA sequence 42 1.6
27gb|AY850134.1| Oryza sativa (japonica cultivar-group) senescence... 42 1.6
28gb|U34740.1|ENU34740 Emericella nidulans sterigmatocystin biosyn... 42 1.6
29ref|NM_106172.2| Arabidopsis thaliana unknown protein AT1G75160 ... 40 6.4
30gb|AC120985.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
31gb|AC118284.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
32gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.4
33ref|XM_471611.1| Oryza sativa (japonica cultivar-group), predic... 40 6.4
34ref|XM_465200.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
35gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.4
36gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
37gb|AC135422.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
38gb|AC145968.3| Pan troglodytes BAC clone RP43-12H15 from 7, comp... 40 6.4
39gb|AC073330.6| Homo sapiens BAC clone RP11-409J21 from 7, comple... 40 6.4
40emb|AL391561.20| Human DNA sequence from clone RP11-99P18 on chr... 40 6.4
41emb|AL356786.36| Human DNA sequence from clone RP3-520E18 on chr... 40 6.4
42emb|AL357497.17| Human DNA sequence from clone RP11-637O19 on ch... 40 6.4
43emb|AL135902.16| Human DNA sequence from clone RP11-204P2 on chr... 40 6.4
44emb|AL109976.23|HSDJ794I6 Human DNA sequence from clone RP4-794I... 40 6.4
45emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 40 6.4
46emb|AJ300188.1|HSA300188 Homo sapiens MASP-2 gene (partial), PM-... 40 6.4
47gb|AC108073.3| Homo sapiens BAC clone RP11-713C19 from 4, comple... 40 6.4
48gb|AC007623.33| Homo sapiens 12 BAC RP11-608E13 (Roswell Park Ca... 40 6.4
49gb|AC022909.13| Homo sapiens chromosome 8, clone RP11-682G1, com... 40 6.4
50gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.4
51gb|AC182463.3| Pan troglodytes BAC clone CH251-511B8 from chromo... 40 6.4
52gb|AC104233.2| Homo sapiens chromosome 8, clone RP11-3G20, compl... 40 6.4
53gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.4
54gb|AC091866.2|AC091866 Homo sapiens chromosome 5 clone CTD-2360G... 40 6.4
55dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
56dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
57dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
58gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 6.4
59gb|AC025814.7|AC025814 Arabidopsis thaliana chromosome 1 BAC F22... 40 6.4
60gb|BT005742.1| Arabidopsis thaliana clone RAFL15-49-B20 (R50043)... 40 6.4
61gb|BC019872.1| Homo sapiens, clone IMAGE:5111803, mRNA 40 6.4
62gb|AC017006.4| Homo sapiens BAC clone RP11-110G2 from 2, complet... 40 6.4
63gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.4
64dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
65dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
66dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
67dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
68dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
69dbj|AP005607.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
70dbj|AP004845.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
71dbj|AK104152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
72dbj|AK063164.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
73gb|AF137218.1|AF137218 Lepisosteus osseus mixed lineage leukemia... 40 6.4
74dbj|AP000763.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.4
75emb|AL731633.2|OSJN00280 Oryza sativa genomic DNA, chromosome 4,... 40 6.4
76gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 6.4
77dbj|AP005360.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.4 
>gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete sequence
          Length = 207268

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 328   tcctcgccgccgactccctcctcgtcctc 356
             ||||||||||||||||| |||||||||||
Sbjct: 19907 tcctcgccgccgactccgtcctcgtcctc 19879
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 271     cgccgcgtcgccccttctcccgc 293
               |||||||||||||||||||||||
Sbjct: 3544405 cgccgcgtcgccccttctcccgc 3544383



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 255      gccgtccgccgtccagcgcc 274
                ||||||||||||||||||||
Sbjct: 27750324 gccgtccgccgtccagcgcc 27750305



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 255      gccgtccgccgtccagcgcc 274
                ||||||||||||||||||||
Sbjct: 12246773 gccgtccgccgtccagcgcc 12246754
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>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0023I17
          Length = 141852

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 271   cgccgcgtcgccccttctcccgc 293
             |||||||||||||||||||||||
Sbjct: 89200 cgccgcgtcgccccttctcccgc 89178
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>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0085K21
          Length = 180714

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 271   cgccgcgtcgccccttctcccgc 293
             |||||||||||||||||||||||
Sbjct: 25695 cgccgcgtcgccccttctcccgc 25673
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>ref|XM_480901.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 438

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 271 cgccgcgtcgccccttctcccgcgtc 296
           ||||| ||||||||||||||||||||
Sbjct: 220 cgccgtgtcgccccttctcccgcgtc 195
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>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02,
             complete sequence
          Length = 125650

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 272   gccgcgtcgccccttctcccgc 293
             ||||||||||||||||||||||
Sbjct: 69581 gccgcgtcgccccttctcccgc 69602
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 271      cgccgcgtcgccccttctcccg 292
                ||||||||||||||||||||||
Sbjct: 26847961 cgccgcgtcgccccttctcccg 26847940



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 271      cgccgcgtcgccccttctcccg 292
                ||||||||||||||||||||||
Sbjct: 11435001 cgccgcgtcgccccttctcccg 11434980
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>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
             sequence
          Length = 149303

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 271   cgccgcgtcgccccttctcccg 292
             ||||||||||||||||||||||
Sbjct: 26961 cgccgcgtcgccccttctcccg 26940
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>gb|AY033092.1| Burkholderia sacchari prp gene cluster, complete sequence
          Length = 9438

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 239  cgtcgagcgccaccacgccgtc 260
            ||||||||||||||||||||||
Sbjct: 1296 cgtcgagcgccaccacgccgtc 1317
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 271     cgccgcgtcgccccttctcccgcgtc 296
               ||||| ||||||||||||||||||||
Sbjct: 8494280 cgccgtgtcgccccttctcccgcgtc 8494255



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 272      gccgcgtcgccccttctcccgcgtc 296
                |||||||||||||||||| ||||||
Sbjct: 20475795 gccgcgtcgccccttctcacgcgtc 20475819
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 272      gccgcgtcgccccttctcccgc 293
                ||||||||||||||||||||||
Sbjct: 20647541 gccgcgtcgccccttctcccgc 20647562



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 271      cgccgcgtcgccccttctcc 290
                ||||||||||||||||||||
Sbjct: 25771399 cgccgcgtcgccccttctcc 25771380



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 277     gtcgccccttctcccgcgtc 296
               ||||||||||||||||||||
Sbjct: 7418662 gtcgccccttctcccgcgtc 7418643
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 271      cgccgcgtcgccccttctcccg 292
                ||||||||||||||||||||||
Sbjct: 26939284 cgccgcgtcgccccttctcccg 26939263



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 271      cgccgcgtcgccccttctcccg 292
                ||||||||||||||||||||||
Sbjct: 11431764 cgccgcgtcgccccttctcccg 11431743
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>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15,
              complete sequence
          Length = 159270

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 271    cgccgcgtcgccccttctcccg 292
              ||||||||||||||||||||||
Sbjct: 143298 cgccgcgtcgccccttctcccg 143277
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>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OSJNBa0087F21
          Length = 187401

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 271  cgccgcgtcgccccttctcccgcgtc 296
            ||||| ||||||||||||||||||||
Sbjct: 6191 cgccgtgtcgccccttctcccgcgtc 6166
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>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0031C02
          Length = 138843

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 271   cgccgcgtcgccccttctcccgcgtc 296
             ||||| ||||||||||||||||||||
Sbjct: 23823 cgccgtgtcgccccttctcccgcgtc 23798
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>ref|NM_188968.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 861

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 272 gccgcgtcgccccttctcccgcgtc 296
           |||||||||||||||||| ||||||
Sbjct: 420 gccgcgtcgccccttctcacgcgtc 396
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 240     gtcgagcgccaccacgccgtc 260
               |||||||||||||||||||||
Sbjct: 2115844 gtcgagcgccaccacgccgtc 2115864
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>ref|XM_675989.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7812.2), mRNA
          Length = 1851

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 tccctcctcgtcctctccgcc 362
           |||||||||||||||||||||
Sbjct: 13  tccctcctcgtcctctccgcc 33
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 240    gtcgagcgccaccacgccgtc 260
              |||||||||||||||||||||
Sbjct: 277555 gtcgagcgccaccacgccgtc 277575
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 240     gtcgagcgccaccacgccgtc 260
               |||||||||||||||||||||
Sbjct: 2047429 gtcgagcgccaccacgccgtc 2047409
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 332      cgccgccgactccctcctcgtcctc 356
                |||||||||||||||| ||||||||
Sbjct: 20569372 cgccgccgactccctcgtcgtcctc 20569348



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 332      cgccgccgactccctcctcg 351
                ||||||||||||||||||||
Sbjct: 12031089 cgccgccgactccctcctcg 12031108
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>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1254_E07
          Length = 124028

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 332   cgccgccgactccctcctcgtcctc 356
             |||||||||||||||| ||||||||
Sbjct: 87019 cgccgccgactccctcgtcgtcctc 86995
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>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0515E01
          Length = 140063

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 332   cgccgccgactccctcctcgtcctc 356
             |||||||||||||||| ||||||||
Sbjct: 35030 cgccgccgactccctcgtcgtcctc 35006
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>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0456B03
          Length = 152973

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 272    gccgcgtcgccccttctcccgcgtc 296
              |||||||||||||||||| ||||||
Sbjct: 106425 gccgcgtcgccccttctcacgcgtc 106449
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>dbj|AK105810.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B12, full
           insert sequence
          Length = 1376

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 332 cgccgccgactccctcctcgtcctc 356
           |||||||||||||||| ||||||||
Sbjct: 313 cgccgccgactccctcgtcgtcctc 337
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>gb|AY107198.1| Zea mays PCO093409 mRNA sequence
          Length = 1566

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 165 ccctctccccgccgcatcgcc 185
           |||||||||||||||||||||
Sbjct: 287 ccctctccccgccgcatcgcc 307
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>gb|AY850134.1| Oryza sativa (japonica cultivar-group) senescence-inducible
           chloroplast stay-green protein (SGR) mRNA, complete cds;
           nuclear gene for chloroplast product
          Length = 1524

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 332 cgccgccgactccctcctcgtcctc 356
           |||||||||||||||| ||||||||
Sbjct: 313 cgccgccgactccctcgtcgtcctc 337
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>gb|U34740.1|ENU34740 Emericella nidulans sterigmatocystin biosynthetic gene cluster: (stcA),
             (stcB), (stcC), (stcE), (aflR), (stcF), (stcI), (stcJ),
             (stcK), (stcL), (stcO), (stcQ), (stcS), (stcT), (stcU),
             (stcV) and (stcW) genes, complete cds
          Length = 59725

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 342   tccctcctcgtcctctccgcc 362
             |||||||||||||||||||||
Sbjct: 38917 tccctcctcgtcctctccgcc 38937
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>ref|NM_106172.2| Arabidopsis thaliana unknown protein AT1G75160 mRNA, complete cds
          Length = 1465

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 cctcctcgtcctctccgccg 363
           ||||||||||||||||||||
Sbjct: 770 cctcctcgtcctctccgccg 789
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>gb|AC120985.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1532_D06,
             complete sequence
          Length = 127150

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   gtcgccccttctcccgcgtc 296
             ||||||||||||||||||||
Sbjct: 31731 gtcgccccttctcccgcgtc 31712
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>gb|AC118284.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1087_C03,
             complete sequence
          Length = 101218

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   cgccgcgtcgccccttctcc 290
             ||||||||||||||||||||
Sbjct: 42693 cgccgcgtcgccccttctcc 42674
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 169     ctccccgccgcatcgcctcgtcga 192
               |||||||||||| |||||||||||
Sbjct: 1950131 ctccccgccgcaccgcctcgtcga 1950108
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>ref|XM_471611.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 510

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 260 ccgccgtccagcgccgcgtcgccc 283
           ||||||||||||||||| ||||||
Sbjct: 76  ccgccgtccagcgccgcctcgccc 53
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>ref|XM_465200.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 762

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 255 gccgtccgccgtccagcgcc 274
           ||||||||||||||||||||
Sbjct: 331 gccgtccgccgtccagcgcc 312
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 176     ccgcatcgcctcgtcgaccg 195
               ||||||||||||||||||||
Sbjct: 3441823 ccgcatcgcctcgtcgaccg 3441842
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>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0075A10, complete sequence
          Length = 171101

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  cgccgcgtcgccccttctcc 290
            ||||||||||||||||||||
Sbjct: 5341 cgccgcgtcgccccttctcc 5322
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>gb|AC135422.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0043H23,
              complete sequence
          Length = 134097

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    gtcgccccttctcccgcgtc 296
              ||||||||||||||||||||
Sbjct: 121439 gtcgccccttctcccgcgtc 121420
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>gb|AC145968.3| Pan troglodytes BAC clone RP43-12H15 from 7, complete sequence
          Length = 192898

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 64596 ttctcccgcgtcagcctcct 64577
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>gb|AC073330.6| Homo sapiens BAC clone RP11-409J21 from 7, complete sequence
          Length = 155704

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 91616 ttctcccgcgtcagcctcct 91597
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>emb|AL391561.20| Human DNA sequence from clone RP11-99P18 on chromosome 1 Contains part
             of the FRAP1 gene for FK506 binding protein 12-rapamycin
             associated protein 1, a novel gene and the 5' end of the
             gene for angiopoietin-like factor (CDT6), complete
             sequence
          Length = 75525

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 53561 ttctcccgcgtcagcctcct 53542
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>emb|AL356786.36| Human DNA sequence from clone RP3-520E18 on chromosome 1p34.2-36.11
             Contains the 3' end of the gene for high-glucose-regulated
             protein 8 (HGRG8), complete sequence
          Length = 63430

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 35440 ttctcccgcgtcagcctcct 35459
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>emb|AL357497.17| Human DNA sequence from clone RP11-637O19 on chromosome 6 Contains the
             5' end of the GCMB gene for glial cells missing
             (Drosophila) homolog b, a novel gene, the 5' end of the
             gene for a novel protein similar to synaptonemal complex
             protein 2 (SYCP2) and a CpG island, complete sequence
          Length = 82952

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 63131 ttctcccgcgtcagcctcct 63112
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>emb|AL135902.16| Human DNA sequence from clone RP11-204P2 on chromosome 6 Contains the
             IL20RA gene for interleukin 20 receptor alpha, a novel
             gene, the 5' part of a novel gene and a CpG island,
             complete sequence
          Length = 152228

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 11264 ttctcccgcgtcagcctcct 11283
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>emb|AL109976.23|HSDJ794I6 Human DNA sequence from clone RP4-794I6 on chromosome 20 Contains the
             3'end of the ITPA gene for inosine triphosphatase
             (nucleoside triphosphate pyrophosphatase), the 3' end of
             the C20orf194 gene for chromosome 20 open reading frame
             194, the SLC4A11 gene for solute carrier family 4, sodium
             bicarbonate transporter-like 1, member 11 (bicarbonate
             transporter related protein 1, BTR1) and two CpG islands,
             complete sequence
          Length = 119071

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 92505 ttctcccgcgtcagcctcct 92486
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>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 253   acgccgtccgccgtccagcgccgc 276
             ||||| ||||||||||||||||||
Sbjct: 94411 acgccctccgccgtccagcgccgc 94388
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>emb|AJ300188.1|HSA300188 Homo sapiens MASP-2 gene (partial), PM-scl gene, FRAP2 gene and CDT6
              gene, clone RPCI.11-99P18
          Length = 148049

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    ttctcccgcgtcagcctcct 304
              ||||||||||||||||||||
Sbjct: 116467 ttctcccgcgtcagcctcct 116448
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>gb|AC108073.3| Homo sapiens BAC clone RP11-713C19 from 4, complete sequence
          Length = 225639

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    ttctcccgcgtcagcctcct 304
              ||||||||||||||||||||
Sbjct: 104837 ttctcccgcgtcagcctcct 104818
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>gb|AC007623.33| Homo sapiens 12 BAC RP11-608E13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 87201

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 39862 ttctcccgcgtcagcctcct 39881
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>gb|AC022909.13| Homo sapiens chromosome 8, clone RP11-682G1, complete sequence
          Length = 182241

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 27228 ttctcccgcgtcagcctcct 27247
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 239     cgtcgagcgccaccacgccg 258
               ||||||||||||||||||||
Sbjct: 1367108 cgtcgagcgccaccacgccg 1367089
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>gb|AC182463.3| Pan troglodytes BAC clone CH251-511B8 from chromosome 16, complete
              sequence
          Length = 194406

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    ttctcccgcgtcagcctcct 304
              ||||||||||||||||||||
Sbjct: 113784 ttctcccgcgtcagcctcct 113803
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>gb|AC104233.2| Homo sapiens chromosome 8, clone RP11-3G20, complete sequence
          Length = 152440

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 33031 ttctcccgcgtcagcctcct 33012
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 239     cgtcgagcgccaccacgccg 258
               ||||||||||||||||||||
Sbjct: 4584229 cgtcgagcgccaccacgccg 4584248
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>gb|AC091866.2|AC091866 Homo sapiens chromosome 5 clone CTD-2360G24, complete sequence
          Length = 119903

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    cacgctgacccccattctccttct 52
             ||||||| ||||||||||||||||
Sbjct: 37075 cacgctggcccccattctccttct 37052
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 260      ccgccgtccagcgccgcgtcgccc 283
                ||||||||||||||||| ||||||
Sbjct: 12679408 ccgccgtccagcgccgcctcgccc 12679385
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 254      cgccgtccgccgtccagcgccgcgtcgc 281
                |||||||||||||||| |||||| ||||
Sbjct: 29295559 cgccgtccgccgtccaccgccgcctcgc 29295532
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 326     cgtcctcgccgccgactccc 345
               ||||||||||||||||||||
Sbjct: 2093415 cgtcctcgccgccgactccc 2093396
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 173     ccgccgcatcgcctcgtcga 192
               ||||||||||||||||||||
Sbjct: 1055195 ccgccgcatcgcctcgtcga 1055176
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>gb|AC025814.7|AC025814 Arabidopsis thaliana chromosome 1 BAC F22H5 genomic sequence, complete
             sequence
          Length = 68041

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   cctcctcgtcctctccgccg 363
             ||||||||||||||||||||
Sbjct: 55758 cctcctcgtcctctccgccg 55739
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>gb|BT005742.1| Arabidopsis thaliana clone RAFL15-49-B20 (R50043) At1g75160 mRNA,
           complete sequence
          Length = 1481

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 cctcctcgtcctctccgccg 363
           ||||||||||||||||||||
Sbjct: 768 cctcctcgtcctctccgccg 787
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>gb|BC019872.1| Homo sapiens, clone IMAGE:5111803, mRNA
          Length = 1389

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 285  ttctcccgcgtcagcctcct 304
            ||||||||||||||||||||
Sbjct: 1283 ttctcccgcgtcagcctcct 1264
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>gb|AC017006.4| Homo sapiens BAC clone RP11-110G2 from 2, complete sequence
          Length = 191953

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 90096 ttctcccgcgtcagcctcct 90115
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    cgtccagcgccgcgtcgccc 283
              ||||||||||||||||||||
Sbjct: 123689 cgtccagcgccgcgtcgccc 123670
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>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0597G07
          Length = 152928

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 254   cgccgtccgccgtccagcgccgcgtcgc 281
             |||||||||||||||| |||||| ||||
Sbjct: 84248 cgccgtccgccgtccaccgccgcctcgc 84221
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>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0041F13
          Length = 163230

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 326    cgtcctcgccgccgactccc 345
              ||||||||||||||||||||
Sbjct: 114277 cgtcctcgccgccgactccc 114258
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>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0441A12
          Length = 185437

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    cgccgccgactccctcctcg 351
              ||||||||||||||||||||
Sbjct: 135569 cgccgccgactccctcctcg 135588
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>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0663F07
          Length = 159046

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   gccgtccgccgtccagcgcc 274
             ||||||||||||||||||||
Sbjct: 35657 gccgtccgccgtccagcgcc 35638
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>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0005A04
          Length = 140723

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    gccgtccgccgtccagcgcc 274
              ||||||||||||||||||||
Sbjct: 136190 gccgtccgccgtccagcgcc 136171
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>dbj|AP005607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ9003_D08
          Length = 88854

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   gccgtccgccgtccagcgcc 274
             ||||||||||||||||||||
Sbjct: 70234 gccgtccgccgtccagcgcc 70215
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>dbj|AP004845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1233_A01
          Length = 98378

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  gccgtccgccgtccagcgcc 274
            ||||||||||||||||||||
Sbjct: 8798 gccgtccgccgtccagcgcc 8779
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>dbj|AK104152.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-C07, full
           insert sequence
          Length = 999

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 326 cgtcctcgccgccgactccc 345
           ||||||||||||||||||||
Sbjct: 223 cgtcctcgccgccgactccc 242
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>dbj|AK063164.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H02, full
           insert sequence
          Length = 1274

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 260 ccgccgtccagcgccgcgtcgccc 283
           ||||||||||||||||| ||||||
Sbjct: 106 ccgccgtccagcgccgcctcgccc 83
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>gb|AF137218.1|AF137218 Lepisosteus osseus mixed lineage leukemia-like protein (Mll) gene,
           partial cds
          Length = 831

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 338 cgactccctcctcgtcctctccgc 361
           |||| |||||||||||||||||||
Sbjct: 217 cgaccccctcctcgtcctctccgc 194
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>dbj|AP000763.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-809N8, complete
             sequence
          Length = 189920

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 29459 ttctcccgcgtcagcctcct 29478
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>emb|AL731633.2|OSJN00280 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0096E05,
             complete sequence
          Length = 129908

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 260   ccgccgtccagcgccgcgtcgccc 283
             ||||||||||||||||| ||||||
Sbjct: 94394 ccgccgtccagcgccgcctcgccc 94371
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 243     gagcgccaccacgccgtccg 262
               ||||||||||||||||||||
Sbjct: 1799157 gagcgccaccacgccgtccg 1799138
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>dbj|AP005360.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1529G8, complete
             sequence
          Length = 147788

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ttctcccgcgtcagcctcct 304
             ||||||||||||||||||||
Sbjct: 52844 ttctcccgcgtcagcctcct 52825


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,186,504
Number of Sequences: 3902068
Number of extensions: 3186504
Number of successful extensions: 69920
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67711
Number of HSP's gapped (non-prelim): 2209
length of query: 471
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 449
effective length of database: 17,147,199,772
effective search space: 7699092697628
effective search space used: 7699092697628
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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