ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart53e09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY364467.1| Triticum monococcum cytosolic glutathione reductase (grc1) mRNA, complete cds Length = 1806 Score = 363 bits (183), Expect = 3e-97 Identities = 230/245 (93%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 175 ggccatggcgcggaaggtgctcaaggacggggaggcgcccgtcgccgccgcagacgacgg 234 |||||||||||||||| ||||||||||||||||||||||| ||| ||||| ||||||| Sbjct: 67 ggccatggcgcggaagatgctcaaggacggggaggcgcccctcgtcgccg---acgacgg 123 Query: 235 cgggagctacgactacgacctcttcgtcatcggcgccggcagcggcggcgttcgcggctc 294 ||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 124 cgggacctacgactacgacctcttcgtcatcggcgctggcagcggcggcgtccgcggctc 183 Query: 295 ccgcaccgccgcgggcttcggggccaaggttgcgatctgcgagctcccgttccaccccat 354 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 ccgcaccgccgccggattcggggccaaggttgcgatctgcgagctcccgttccaccccat 243 Query: 355 cagctccgagtggctgggcggccacggcgggacgtgcgtgatacgtggctgcgtccccaa 414 |||||||||||||||||| || |||||||| |||||||||||||||||||||||||| || Sbjct: 244 cagctccgagtggctgggaggacacggcggaacgtgcgtgatacgtggctgcgtcccgaa 303 Query: 415 gaaga 419 ||||| Sbjct: 304 gaaga 308
>ref|XM_468362.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1839 Score = 178 bits (90), Expect = 9e-42 Identities = 153/174 (87%) Strand = Plus / Plus Query: 229 cgacggcgggagctacgactacgacctcttcgtcatcggcgccggcagcggcggcgttcg 288 ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| || Sbjct: 135 cgacggcgggagctacgactacgacctgttcgtgatcggcgccgggagcggcggcgtccg 194 Query: 289 cggctcccgcaccgccgcgggcttcggggccaaggttgcgatctgcgagctcccgttcca 348 ||||| |||||| ||||| ||||||||| ||||||||||| ||||||||||||||||| Sbjct: 195 gggctctcgcacctccgcgtccttcggggctaaggttgcgatttgcgagctcccgttcca 254 Query: 349 ccccatcagctccgagtggctgggcggccacggcgggacgtgcgtgatacgtgg 402 ||||||||||| || |||| || || || || |||||||| ||||||||||| Sbjct: 255 tcccatcagctcggattggcaaggagggcatggtgggacgtgtgtgatacgtgg 308
>dbj|AK100446.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090G17, full insert sequence Length = 1839 Score = 178 bits (90), Expect = 9e-42 Identities = 153/174 (87%) Strand = Plus / Plus Query: 229 cgacggcgggagctacgactacgacctcttcgtcatcggcgccggcagcggcggcgttcg 288 ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| || Sbjct: 135 cgacggcgggagctacgactacgacctgttcgtgatcggcgccgggagcggcggcgtccg 194 Query: 289 cggctcccgcaccgccgcgggcttcggggccaaggttgcgatctgcgagctcccgttcca 348 ||||| |||||| ||||| ||||||||| ||||||||||| ||||||||||||||||| Sbjct: 195 gggctctcgcacctccgcgtccttcggggctaaggttgcgatttgcgagctcccgttcca 254 Query: 349 ccccatcagctccgagtggctgggcggccacggcgggacgtgcgtgatacgtgg 402 ||||||||||| || |||| || || || || |||||||| ||||||||||| Sbjct: 255 tcccatcagctcggattggcaaggagggcatggtgggacgtgtgtgatacgtgg 308
>dbj|D85751.1| Oryza sativa (japonica cultivar-group) mRNA for cytosolic glutathione reductase (RGRC2), complete cds Length = 1803 Score = 178 bits (90), Expect = 9e-42 Identities = 153/174 (87%) Strand = Plus / Plus Query: 229 cgacggcgggagctacgactacgacctcttcgtcatcggcgccggcagcggcggcgttcg 288 ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| || Sbjct: 190 cgacggcgggagctacgactacgacctgttcgtgatcggcgccgggagcggcggcgtccg 249 Query: 289 cggctcccgcaccgccgcgggcttcggggccaaggttgcgatctgcgagctcccgttcca 348 ||||| |||||| ||||| ||||||||| ||||||||||| ||||||||||||||||| Sbjct: 250 gggctctcgcacctccgcgtccttcggggctaaggttgcgatttgcgagctcccgttcca 309 Query: 349 ccccatcagctccgagtggctgggcggccacggcgggacgtgcgtgatacgtgg 402 ||||||||||| || |||| || || || || |||||||| ||||||||||| Sbjct: 310 tcccatcagctcggattggcaaggagggcatggtgggacgtgtgtgatacgtgg 363
>gb|AY103791.1| Zea mays PCO149057 mRNA sequence Length = 1931 Score = 167 bits (84), Expect = 4e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 245 gactacgacctcttcgtcatcggcgccggcagcggcggcgttcgcggctcccgcaccgcc 304 |||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||||| Sbjct: 322 gactacgatctcttcgtcatcggggcgggcagcggcggcgttcgcggctctcgcaccgcc 381 Query: 305 gcgggcttcggggccaaggttgcgatctgcgagctcccgttccaccccatcagctccgag 364 || |||||| || ||||||||||| || |||||||| ||||||||||||||||| ||| Sbjct: 382 gcctccttcggagctaaggttgcgatttgtgagctcccattccaccccatcagctcagag 441 Query: 365 tggctgggcggccacggcgggacgtgcgtgatacgtggctgcgt 408 ||||| || || || || ||||| |||||||||||||| ||||| Sbjct: 442 tggctaggaggacatggtgggacttgcgtgatacgtggttgcgt 485
>dbj|D78136.1|RICGR Oryza sativa (japonica cultivar-group) mRNA for cytosolic glutathione reductase, complete cds Length = 1688 Score = 163 bits (82), Expect = 6e-37 Identities = 151/174 (86%) Strand = Plus / Plus Query: 229 cgacggcgggagctacgactacgacctcttcgtcatcggcgccggcagcggcggcgttcg 288 ||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||| || Sbjct: 92 cgacggcgggagctacgactacgacctgttcgtgatcggcgccgtgagcggcggcgtccg 151 Query: 289 cggctcccgcaccgccgcgggcttcggggccaaggttgcgatctgcgagctcccgttcca 348 ||||| |||||| ||||| ||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 152 gggctctcgcacctccgcgtccttcggggctaagtttgcgatttgcgagctcccgttcca 211 Query: 349 ccccatcagctccgagtggctgggcggccacggcgggacgtgcgtgatacgtgg 402 ||||||||||| || |||| || || || || |||||||| ||||||||||| Sbjct: 212 tcccatcagctcggattggcaaggagggcatggtgggacgtgtgtgatacgtgg 265
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 113 bits (57), Expect = 5e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 229 cgacggcgggagctacgactacgacctcttcgtcatcggcgccggcagcggcggcgttcg 288 ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| || Sbjct: 34856682 cgacggcgggagctacgactacgacctgttcgtgatcggcgccgggagcggcggcgtccg 34856741 Query: 289 cggctcccgcaccgccgcgggcttcggggccaaggtt 325 ||||| |||||| ||||| ||||||||| |||||| Sbjct: 34856742 gggctctcgcacctccgcgtccttcggggctaaggtt 34856778 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 321 aggttgcgatctgcgagctcccgttccaccccatcagctc 360 |||||||||| ||||||||||||||||| ||||||||||| Sbjct: 34856876 aggttgcgatttgcgagctcccgttccatcccatcagctc 34856915
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 113 bits (57), Expect = 5e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 229 cgacggcgggagctacgactacgacctcttcgtcatcggcgccggcagcggcggcgttcg 288 ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| || Sbjct: 78277 cgacggcgggagctacgactacgacctgttcgtgatcggcgccgggagcggcggcgtccg 78336 Query: 289 cggctcccgcaccgccgcgggcttcggggccaaggtt 325 ||||| |||||| ||||| ||||||||| |||||| Sbjct: 78337 gggctctcgcacctccgcgtccttcggggctaaggtt 78373 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 321 aggttgcgatctgcgagctcccgttccaccccatcagctc 360 |||||||||| ||||||||||||||||| ||||||||||| Sbjct: 78471 aggttgcgatttgcgagctcccgttccatcccatcagctc 78510
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 113 bits (57), Expect = 5e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 229 cgacggcgggagctacgactacgacctcttcgtcatcggcgccggcagcggcggcgttcg 288 ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| || Sbjct: 16179 cgacggcgggagctacgactacgacctgttcgtgatcggcgccgggagcggcggcgtccg 16238 Query: 289 cggctcccgcaccgccgcgggcttcggggccaaggtt 325 ||||| |||||| ||||| ||||||||| |||||| Sbjct: 16239 gggctctcgcacctccgcgtccttcggggctaaggtt 16275 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 321 aggttgcgatctgcgagctcccgttccaccccatcagctc 360 |||||||||| ||||||||||||||||| ||||||||||| Sbjct: 16373 aggttgcgatttgcgagctcccgttccatcccatcagctc 16412
>dbj|AB009592.1| Oryza sativa (japonica cultivar-group) gene for cytosolic glutathione reductase, complete cds Length = 7446 Score = 113 bits (57), Expect = 5e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 229 cgacggcgggagctacgactacgacctcttcgtcatcggcgccggcagcggcggcgttcg 288 ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| || Sbjct: 1890 cgacggcgggagctacgactacgacctgttcgtgatcggcgccgggagcggcggcgtccg 1949 Query: 289 cggctcccgcaccgccgcgggcttcggggccaaggtt 325 ||||| |||||| ||||| ||||||||| |||||| Sbjct: 1950 gggctctcgcacctccgcgtccttcggggctaaggtt 1986 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 321 aggttgcgatctgcgagctcccgttccaccccatcagctc 360 |||||||||| ||||||||||||||||| ||||||||||| Sbjct: 2084 aggttgcgatttgcgagctcccgttccatcccatcagctc 2123
>gb|DQ257593.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB flanking T-DNA insertion sequence Length = 623 Score = 63.9 bits (32), Expect = 4e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 388 gtgcgtgatacgtggctgcgtccccaagaaga 419 |||||||||||||||||||||||||||||||| Sbjct: 76 gtgcgtgatacgtggctgcgtccccaagaaga 107
>gb|DQ175915.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB flanking T-DNA insertion sequence Length = 664 Score = 63.9 bits (32), Expect = 4e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 388 gtgcgtgatacgtggctgcgtccccaagaaga 419 |||||||||||||||||||||||||||||||| Sbjct: 548 gtgcgtgatacgtggctgcgtccccaagaaga 517
>ref|NM_196490.1| Oryza sativa (japonica cultivar-group) contains similarity to glutathione reductase (NADPH) (OSJNBa0032I20.3), mRNA Length = 1665 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 241 ctacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 ||||||||||||||||||| |||||||||||| |||||||| Sbjct: 258 ctacgactacgacctcttcaccatcggcgccgggagcggcgg 299
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 241 ctacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 ||||||||||||||||||| |||||||||||| |||||||| Sbjct: 13995477 ctacgactacgacctcttcaccatcggcgccgggagcggcgg 13995436
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 241 ctacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 ||||||||||||||||||| |||||||||||| |||||||| Sbjct: 11606 ctacgactacgacctcttcaccatcggcgccgggagcggcgg 11565
>gb|AF109694.1|AF109694 Brassica juncea glutathione reductase (GR1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2042 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 241 ctacgactacgacctcttcgtcatcggcgccggcagcggcggcgttcgcggctcccgc 298 |||||||| ||| |||||| |||||||||||| ||||||||||| |||| ||||||| Sbjct: 283 ctacgacttcgatctcttcaccatcggcgccggaagcggcggcgtccgcgcctcccgc 340
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 241 ctacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 ||||||||||||||||||| |||||||||||| |||||||| Sbjct: 14003719 ctacgactacgacctcttcaccatcggcgccgggagcggcgg 14003678
>gb|AF019907.1|AF019907 Vitis vinifera glutathione reductase (NADPH) (GOR) mRNA, partial cds Length = 1995 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 241 ctacgactacgacctcttcgtcatcggcgccggcagcggcggcgtt 286 |||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 252 ctacgacttcgacctcttcaccatcggcgcaggcagcggcggcgtt 297
>ref|XM_470271.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1668 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 242 tacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 226 tacgactacgacctcttcaccatcggcgccgggagcggcgg 266
>gb|AF010283.1| Sorghum bicolor ADP-glucose pyrophosphorylase subunit SH2, transcriptional regulator, NADPH-dependent reductase A1-a and NADPH-dependent reductase A1-b genes, complete cds Length = 42446 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 242 tacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 ||||||||||||||||||| ||||||||| || |||||||| Sbjct: 26030 tacgactacgacctcttcgccatcggcgctgggagcggcgg 25990
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 242 tacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 3409536 tacgactacgacctcttcaccatcggcgccgggagcggcgg 3409576 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 cggggaggcgcccgtcgccgc 222 ||||||||||||||||||||| Sbjct: 6059489 cggggaggcgcccgtcgccgc 6059469 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gatccatccatccatccgcc 59 |||||||||||||||||||| Sbjct: 31005749 gatccatccatccatccgcc 31005768 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atccatccatccatccgccg 60 |||||||||||||||||||| Sbjct: 5497972 atccatccatccatccgccg 5497953 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 cggcgccggcagcggcggcgttcg 288 ||||| |||||||||||||||||| Sbjct: 3922396 cggcggcggcagcggcggcgttcg 3922419
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 251 gacctcttcgtcatcggcgccggcagcggcggcgttcgcggctcccgca 299 ||||| ||||||||||||| ||||||||||||||| |||| | |||||| Sbjct: 653856 gaccttttcgtcatcggcggcggcagcggcggcgtgcgcgccgcccgca 653808
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 242 tacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 19678 tacgactacgacctcttcaccatcggcgccgggagcggcgg 19638
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 242 tacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 100839 tacgactacgacctcttcaccatcggcgccgggagcggcgg 100799
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 242 tacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 3409647 tacgactacgacctcttcaccatcggcgccgggagcggcgg 3409687 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 cggggaggcgcccgtcgccgc 222 ||||||||||||||||||||| Sbjct: 6058702 cggggaggcgcccgtcgccgc 6058682 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gatccatccatccatccgcc 59 |||||||||||||||||||| Sbjct: 31096272 gatccatccatccatccgcc 31096291 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atccatccatccatccgccg 60 |||||||||||||||||||| Sbjct: 5497187 atccatccatccatccgccg 5497168 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 cggcgccggcagcggcggcgttcg 288 ||||| |||||||||||||||||| Sbjct: 3922507 cggcggcggcagcggcggcgttcg 3922530
>dbj|AK103418.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128J11, full insert sequence Length = 2102 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 242 tacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 309 tacgactacgacctcttcaccatcggcgccgggagcggcgg 349
>gb|L11632.1|SOYGLUTR Soybean glutathione reductase (GR) mRNA, complete cds Length = 2081 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 241 ctacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 |||||||| |||||||||| ||||||||| ||||||||||| Sbjct: 250 ctacgacttcgacctcttcaccatcggcgcaggcagcggcgg 291
>gb|AF349449.1|AF349449 Brassica juncea glutathione reductase (GR2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1968 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 241 ctacgactacgacctcttcgtcatcggcgccggcagcggcggcgttcgcggctcccg 297 |||||||| || |||||| |||||||||||| ||||||||||| |||| |||||| Sbjct: 314 ctacgactttgatctcttcaccatcggcgccggaagcggcggcgtccgcgcctcccg 370
>ref|NM_185283.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1692 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Plus Query: 244 cgactacgacctcttcgtcatcggcgccggc 274 ||||||||||||| || |||||||||||||| Sbjct: 237 cgactacgacctcgtcatcatcggcgccggc 267
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Minus Query: 244 cgactacgacctcttcgtcatcggcgccggc 274 |||||||||||| ||||||||||| |||||| Sbjct: 3518979 cgactacgacctgttcgtcatcggtgccggc 3518949
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Minus Query: 244 cgactacgacctcttcgtcatcggcgccggc 274 ||||||||||||| || |||||||||||||| Sbjct: 136802 cgactacgacctcgtcatcatcggcgccggc 136772
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 244 cgactacgacctcttcgtcatcggcgc 270 |||||||||||||||||| |||||||| Sbjct: 1909328 cgactacgacctcttcgtgatcggcgc 1909354
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 258 tcgtcatcggcgccggcagcggcggcg 284 ||||||||||||||||| ||||||||| Sbjct: 25593583 tcgtcatcggcgccggcggcggcggcg 25593609
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Minus Query: 244 cgactacgacctcttcgtcatcggcgccggc 274 ||||||||||||| || |||||||||||||| Sbjct: 3259085 cgactacgacctcgtcatcatcggcgccggc 3259055
>gb|AE004936.1| Pseudomonas aeruginosa PAO1, section 497 of 529 of the complete genome Length = 14803 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Minus Query: 177 ccatggcgcggaaggtgctcaaggacg 203 ||||||||| ||||||||||||||||| Sbjct: 5406 ccatggcgccgaaggtgctcaaggacg 5380
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 258 tcgtcatcggcgccggcagcggcggcg 284 ||||||||||||||||| ||||||||| Sbjct: 111900 tcgtcatcggcgccggcggcggcggcg 111926
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E02 Length = 154458 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 258 tcgtcatcggcgccggcagcggcggcg 284 ||||||||||||||||| ||||||||| Sbjct: 17028 tcgtcatcggcgccggcggcggcggcg 17054
>gb|AF223421.1|AF223421 Pseudomonas aeruginosa clone 56 biofilm-dependent regulatory element Length = 377 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 177 ccatggcgcggaaggtgctcaaggacg 203 ||||||||| ||||||||||||||||| Sbjct: 157 ccatggcgccgaaggtgctcaaggacg 183
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Minus Query: 247 ctacgacctcttcgtcatcggcgccgg 273 |||||||||| |||||||||||||||| Sbjct: 89782 ctacgacctcatcgtcatcggcgccgg 89756 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 tctgctccgggatccatcctg 118 ||||||||||||||||||||| Sbjct: 3138783 tctgctccgggatccatcctg 3138803
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Minus Query: 244 cgactacgacctcttcgtcatcggcgccggc 274 ||||||||||||| || |||||||||||||| Sbjct: 52909 cgactacgacctcgtcatcatcggcgccggc 52879
>gb|AF029308.1|HTCRBCHR9 Homo sapiens chromosome 9 duplication of the T cell receptor beta locus and trypsinogen gene families Length = 216293 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgtt 286 |||||||||||||||||||||| Sbjct: 70919 cggcgccggcagcggcggcgtt 70898
>emb|AL356489.14| Human DNA sequence from clone RP11-384P7 on chromosome 9 Contains the TRBV25OR9-2 gene for T cell receptor beta variable 25/OR9-2, the PTENP1 gene for phosphatase and tensin homolog (mutated in multiple advanced cancers 1) pseudogene 1 (PTH2, PTEN2, PSIPTEN), a T-cell receptor beta chain V region protein pseudogene, two novel genes, the 5' end of the PRSS3 gene for serine protease 3 (mesotrypsin) and two CpG islands, complete sequence Length = 130639 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgtt 286 |||||||||||||||||||||| Sbjct: 22271 cggcgccggcagcggcggcgtt 22250
>ref|NG_001337.1| Homo sapiens T cell receptor beta variable orphans on chromosome 9 (TRBVOR9@) on chromosome 9 Length = 194564 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgtt 286 |||||||||||||||||||||| Sbjct: 70871 cggcgccggcagcggcggcgtt 70850
>emb|CR593710.1| full-length cDNA clone CS0DC006YH07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 873 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgtt 286 |||||||||||||||||||||| Sbjct: 64 cggcgccggcagcggcggcgtt 43
>gb|AC007340.8| Homo sapiens chromosome 16 clone RP11-358O5, complete sequence Length = 172833 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 catcctgccatccacccaggcc 133 |||||||||||||||||||||| Sbjct: 97015 catcctgccatccacccaggcc 97036
>emb|BX537113.8| Zebrafish DNA sequence from clone CH211-207G17 in linkage group 16, complete sequence Length = 218597 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 taaaagatccatccatccatcc 56 |||||||||||||||||||||| Sbjct: 54787 taaaagatccatccatccatcc 54808 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagatccatccatccatcc 56 |||||||||||||||||||| Sbjct: 55730 aaagatccatccatccatcc 55749 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagatccatccatccatcc 56 |||||||||||||||||||| Sbjct: 55275 aaagatccatccatccatcc 55294 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagatccatccatccatcc 56 |||||||||||||||||||| Sbjct: 54685 aaagatccatccatccatcc 54704
>gb|AF105199.1|AF105199 Glycine max glutathione reductase (GR-5) gene, complete cds Length = 7366 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Plus Query: 241 ctacgactacgacctcttcgtcatcggcgccggcagcggcgg 282 |||||||| ||||| |||| ||||||||| ||||||||||| Sbjct: 1872 ctacgacttcgaccgcttcaccatcggcgcaggcagcggcgg 1913
>ref|NM_191756.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 cggcgccggcagcggcggcgt 285 ||||||||||||||||||||| Sbjct: 32 cggcgccggcagcggcggcgt 52
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 ccgttcggccatggcgcggaa 189 ||||||||||||||||||||| Sbjct: 625983 ccgttcggccatggcgcggaa 625963
>emb|BX957316.7| Zebrafish DNA sequence from clone CH211-120B19 in linkage group 8, complete sequence Length = 144967 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 aaaagatccatccatccatcc 56 ||||||||||||||||||||| Sbjct: 98612 aaaagatccatccatccatcc 98592
>gb|AE005900.1| Caulobacter crescentus CB15 section 226 of 359 of the complete genome Length = 14916 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 241 ctacgactacgacctcttcgtcatcggcgccggcagcggcggcgt 285 |||||||| || ||||||||||||||||| ||| ||||||||| Sbjct: 11757 ctacgactttgatctcttcgtcatcggcgcgggctccggcggcgt 11713
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 245 gactacgacctcttcgtcatcggcg 269 ||||||||||| ||||||||||||| Sbjct: 2487262 gactacgaccttttcgtcatcggcg 2487238
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 atccatccatccatccgccgc 61 ||||||||||||||||||||| Sbjct: 4284103 atccatccatccatccgccgc 4284123
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgt 285 ||||||||||||||||||||| Sbjct: 29779119 cggcgccggcagcggcggcgt 29779099
>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090D11, complete sequence Length = 174865 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 cggggaggcgcccgtcgccgc 222 ||||||||||||||||||||| Sbjct: 52965 cggggaggcgcccgtcgccgc 52945
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgt 285 ||||||||||||||||||||| Sbjct: 23214 cggcgccggcagcggcggcgt 23194
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgt 285 ||||||||||||||||||||| Sbjct: 108850 cggcgccggcagcggcggcgt 108830
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 1.4 Identities = 48/57 (84%) Strand = Plus / Plus Query: 242 tacgactacgacctcttcgtcatcggcgccggcagcggcggcgttcgcggctcccgc 298 |||||||||||||||||| |||||||| ||| |||||||| |||| ||||||| Sbjct: 1005879 tacgactacgacctcttcaccatcggcggcggatcgggcggcgtgcgcgcctcccgc 1005935
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 cgcggctcccgcaccgccgcg 307 ||||||||||||||||||||| Sbjct: 111120 cgcggctcccgcaccgccgcg 111100
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 atccatccatccatccgccgc 61 ||||||||||||||||||||| Sbjct: 46897 atccatccatccatccgccgc 46917
>dbj|AK063369.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E01, full insert sequence Length = 1248 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 cggcgccggcagcggcggcgt 285 ||||||||||||||||||||| Sbjct: 94 cggcgccggcagcggcggcgt 114
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 ggcagcggcggcgttcgcggc 292 ||||||||||||||||||||| Sbjct: 219975 ggcagcggcggcgttcgcggc 219955
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 agtggctgggcggccacggcg 383 ||||||||||||||||||||| Sbjct: 2869783 agtggctgggcggccacggcg 2869763
>emb|Z12618.1|CFTRG C.fasciculata gene encoding trypanothione reductase Length = 1771 Score = 42.1 bits (21), Expect = 1.4 Identities = 38/41 (92%), Gaps = 2/41 (4%) Strand = Plus / Plus Query: 379 cggcgggacgtgcgtgatacgtgg-ctgcgtccccaagaag 418 |||||| |||||||||| |||||| |||||||||||||||| Sbjct: 254 cggcggcacgtgcgtga-acgtgggctgcgtccccaagaag 293
>gb|M73324.1|TRFTRPREDB Crithidia fasciculata trypanothione reductase (tpr) gene (clone TR5), complete cds Length = 1823 Score = 42.1 bits (21), Expect = 1.4 Identities = 38/41 (92%), Gaps = 2/41 (4%) Strand = Plus / Plus Query: 379 cggcgggacgtgcgtgatacgtgg-ctgcgtccccaagaag 418 |||||| |||||||||| |||||| |||||||||||||||| Sbjct: 263 cggcggcacgtgcgtga-acgtgggctgcgtccccaagaag 302
>gb|AC154650.2| Mus musculus BAC clone RP23-162K2 from chromosome 17, complete sequence Length = 210417 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aaagatccatccatccatcc 56 |||||||||||||||||||| Sbjct: 144285 aaagatccatccatccatcc 144266
>ref|XM_474092.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 tcatcggcgccggcagcggcggcg 284 ||||||||| |||||||||||||| Sbjct: 407 tcatcggcggcggcagcggcggcg 430
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gaggcgcccgtcgccgccgc 225 |||||||||||||||||||| Sbjct: 1816710 gaggcgcccgtcgccgccgc 1816729
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gaggcgcccgtcgccgccgc 225 |||||||||||||||||||| Sbjct: 3060780 gaggcgcccgtcgccgccgc 3060799
>ref|XM_653444.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0932.2), mRNA Length = 1419 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tggctgcgtccccaagaaga 419 |||||||||||||||||||| Sbjct: 150 tggctgcgtccccaagaaga 169
>ref|XM_754472.1| Ustilago maydis 521 hypothetical protein (UM03418.1) partial mRNA Length = 4074 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cgacctcttcgtcatcggcg 269 |||||||||||||||||||| Sbjct: 3599 cgacctcttcgtcatcggcg 3618
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12 Length = 323450 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 tacgacctcttcgtcatcggcgccggca 275 |||||||| ||||||||||||| ||||| Sbjct: 29764 tacgaccttttcgtcatcggcggcggca 29737
>gb|AC136628.2| Homo sapiens chromosome 5 clone RP11-798K23, complete sequence Length = 137132 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagatccatccatccatcc 56 |||||||||||||||||||| Sbjct: 107649 aaagatccatccatccatcc 107668 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagatccatccatccatcc 56 |||||||||||||||||||| Sbjct: 107459 aaagatccatccatccatcc 107478
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gatccatccatccatccgcc 59 |||||||||||||||||||| Sbjct: 90315 gatccatccatccatccgcc 90296
>emb|AL450398.9| Human DNA sequence from clone RP11-202P11 on chromosome 10 Contains the 3'end of a novel gene containing FLJ40604 and FLJ40930, complete sequence Length = 55063 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 atccatcctgccatccacccaggc 132 ||||||||| |||||||||||||| Sbjct: 24812 atccatccttccatccacccaggc 24789
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cggcagcggcggcgttcgcg 290 |||||||||||||||||||| Sbjct: 559408 cggcagcggcggcgttcgcg 559427
>ref|XM_780852.1| PREDICTED: Strongylocentrotus purpuratus similar to AT rich interactive domain 1B (SWI1-like) isoform 3 (LOC580818), mRNA Length = 7347 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 gtcatcggcgccggcagcggcggc 283 |||||||||| ||||||||||||| Sbjct: 1581 gtcatcggcggcggcagcggcggc 1604
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 259 cgtcatcggcgccggcagcggcggcgttcgcg 290 |||||||||||||||| ||||||||| |||| Sbjct: 143333 cgtcatcggcgccggctccggcggcgtgcgcg 143302
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 259 cgtcatcggcgccggcagcggcggcgttcgcg 290 |||||||||||||||| ||||||||| |||| Sbjct: 66387 cgtcatcggcgccggctccggcggcgtgcgcg 66356
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 cgtcatcggcgccggcagcggcggcgttcgcg 290 |||||||||||||||| ||||||||| |||| Sbjct: 160248 cgtcatcggcgccggctccggcggcgtgcgcg 160279
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 cggcgccggcagcggcggcg 284 |||||||||||||||||||| Sbjct: 165190 cggcgccggcagcggcggcg 165209
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gaggcgcccgtcgccgccgc 225 |||||||||||||||||||| Sbjct: 2790839 gaggcgcccgtcgccgccgc 2790858
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 tcgtcatcggcgccggcagcggcggcgt 285 |||||||||||| |||| |||||||||| Sbjct: 23873 tcgtcatcggcggcggcggcggcggcgt 23846
>emb|AJ272110.1|SMA272110 Stenotrophomonas maltophilia blaL2 gene for L2 b-lactamase Length = 912 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgttcgcggc 292 ||||||||||| ||||||||||||||| Sbjct: 133 cggcgccggcaatggcggcgttcgcggc 106
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atccatccatccatccgccg 60 |||||||||||||||||||| Sbjct: 41503 atccatccatccatccgccg 41484
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 catcggcgccggcagcggcggcgt 285 ||||||||||||| |||||||||| Sbjct: 4888598 catcggcgccggcggcggcggcgt 4888621 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 cgtcatcggcgccggcagcggcgg 282 ||||| |||||||||||||||||| Sbjct: 2329422 cgtcaccggcgccggcagcggcgg 2329399
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1345H02, from chromosome 3, complete sequence Length = 145290 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atccatccatccatccgccg 60 |||||||||||||||||||| Sbjct: 94566 atccatccatccatccgccg 94547
>gb|AE011685.1| Xanthomonas axonopodis pv. citri str. 306, section 63 of 469 of the complete genome Length = 10095 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcatcggcgccggcagcggc 280 |||||||||||||||||||| Sbjct: 5600 tcatcggcgccggcagcggc 5581
>gb|AF391291.1| Branchiostoma floridae cosmid MPMGc117E1080, partial sequence Length = 42893 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 gccacggcgggacgtgcgtg 394 |||||||||||||||||||| Sbjct: 27450 gccacggcgggacgtgcgtg 27431
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 tcgtcctagggttccggggctgac 161 |||||| ||||||||||||||||| Sbjct: 48510 tcgtccaagggttccggggctgac 48487
>gb|AC171015.5| Gallus gallus BAC clone CH261-18L11 from chromosome ul, complete sequence Length = 215430 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagatccatccatccatcc 56 |||||||||||||||||||| Sbjct: 198701 aaagatccatccatccatcc 198720
>emb|AJ605536.2| Streptomyces peucetius cyp0549 gene for putative cytochrome P450 and fdr549 gene for putative ferredoxin reductase, strain ATCC 27952 Length = 2529 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 tcttcgtcatcggcgccggc 274 |||||||||||||||||||| Sbjct: 344 tcttcgtcatcggcgccggc 363
>dbj|AB194317.1| Stenotrophomonas maltophilia gene for L2 beta-lactamase, partial cds, strain:BL-16 Length = 872 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgttcgcggc 292 ||||||||||| ||||||||||||||| Sbjct: 100 cggcgccggcaatggcggcgttcgcggc 73
>dbj|AB194316.1| Stenotrophomonas maltophilia gene for L2 beta-lactamase, partial cds, strain:BL-15 Length = 872 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgttcgcggc 292 ||||||||||| ||||||||||||||| Sbjct: 100 cggcgccggcaatggcggcgttcgcggc 73
>dbj|AB194313.1| Stenotrophomonas maltophilia gene for L2 beta-lactamase, partial cds, strain:BL-10 Length = 872 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgttcgcggc 292 ||||||||||| ||||||||||||||| Sbjct: 100 cggcgccggcaatggcggcgttcgcggc 73
>dbj|AB194312.1| Stenotrophomonas maltophilia gene for L2 beta-lactamase, partial cds, strain:BL-9 Length = 872 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgttcgcggc 292 ||||||||||| ||||||||||||||| Sbjct: 100 cggcgccggcaatggcggcgttcgcggc 73
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 cggcgccggcagcggcggcg 284 |||||||||||||||||||| Sbjct: 772837 cggcgccggcagcggcggcg 772856
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcg 284 |||||||||||||||||||| Sbjct: 3998 cggcgccggcagcggcggcg 3979
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 tcgtcatcggcgccggcagcggcggcgt 285 |||||||||||| |||| |||||||||| Sbjct: 34569752 tcgtcatcggcggcggcggcggcggcgt 34569725 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 tcatcggcgccggcagcggcggcg 284 ||||||||| |||||||||||||| Sbjct: 32827512 tcatcggcggcggcagcggcggcg 32827489
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 tcatcggcgccggcagcggcggcg 284 ||||||||| |||||||||||||| Sbjct: 22776319 tcatcggcggcggcagcggcggcg 22776342
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cgccgccgcagacgacggcg 236 |||||||||||||||||||| Sbjct: 5570251 cgccgccgcagacgacggcg 5570270
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 cggcgccggcagcggcggcgttcg 288 ||||| |||||||||||||||||| Sbjct: 128869 cggcggcggcagcggcggcgttcg 128892
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 tacgacctcttcgtcatcggcgccggca 275 ||||||||| |||||||||||| ||||| Sbjct: 7970242 tacgacctcctcgtcatcggcggcggca 7970215 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 tggctgggcggccacggcgg 384 |||||||||||||||||||| Sbjct: 2458315 tggctgggcggccacggcgg 2458334
>gb|AC113425.2| Homo sapiens chromosome 5 clone RP11-626B22, complete sequence Length = 180571 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagatccatccatccatcc 56 |||||||||||||||||||| Sbjct: 113773 aaagatccatccatccatcc 113792 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaagatccatccatccatcc 56 |||||||||||||||||||| Sbjct: 113579 aaagatccatccatccatcc 113598
>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0081K20 Length = 117287 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cgccgccgcagacgacggcg 236 |||||||||||||||||||| Sbjct: 83336 cgccgccgcagacgacggcg 83355
>emb|BX323029.6| Zebrafish DNA sequence from clone CH211-261O16, complete sequence Length = 175261 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gatccatccatccatccgcc 59 |||||||||||||||||||| Sbjct: 18980 gatccatccatccatccgcc 18961
>gb|AE005090.1| Halobacterium sp. NRC-1 section 121 of 170 of the complete genome Length = 13542 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cgggagctacgactacgacc 254 |||||||||||||||||||| Sbjct: 12738 cgggagctacgactacgacc 12757
>dbj|AK121530.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030N24, full insert sequence Length = 1340 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 tcgtcatcggcgccggcagcggcggcgt 285 |||||||||||| |||| |||||||||| Sbjct: 722 tcgtcatcggcggcggcggcggcggcgt 695
>dbj|AK111195.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-C02, full insert sequence Length = 2539 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgttcg 288 ||||| |||||||||||||||||| Sbjct: 99 cggcggcggcagcggcggcgttcg 76
>dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F11, full insert sequence Length = 1255 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 tcatcggcgccggcagcggcggcg 284 ||||||||| |||||||||||||| Sbjct: 557 tcatcggcggcggcagcggcggcg 580
>dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F10, full insert sequence Length = 1242 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 tcatcggcgccggcagcggcggcg 284 ||||||||| |||||||||||||| Sbjct: 557 tcatcggcggcggcagcggcggcg 580
>dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H11, full insert sequence Length = 1251 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 tcatcggcgccggcagcggcggcg 284 ||||||||| |||||||||||||| Sbjct: 553 tcatcggcggcggcagcggcggcg 576
>dbj|AK101161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027P11, full insert sequence Length = 2507 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 cggcgccggcagcggcggcgttcg 288 ||||| |||||||||||||||||| Sbjct: 67 cggcggcggcagcggcggcgttcg 44
>ref|NM_209486.1| Eremothecium gossypii ADR037Wp (ADR037W), mRNA Length = 759 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 cggcgccggcagcggcggcg 284 |||||||||||||||||||| Sbjct: 359 cggcgccggcagcggcggcg 378
>dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094H13, full insert sequence Length = 1272 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 tcatcggcgccggcagcggcggcg 284 ||||||||| |||||||||||||| Sbjct: 561 tcatcggcggcggcagcggcggcg 584
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 tcggcgccggcagcggcggc 283 |||||||||||||||||||| Sbjct: 1634114 tcggcgccggcagcggcggc 1634095
>emb|AL845526.25| Zebrafish DNA sequence from clone CH211-11P18 in linkage group 22, complete sequence Length = 165617 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 atccatccatccatccgccg 60 |||||||||||||||||||| Sbjct: 143856 atccatccatccatccgccg 143875
>dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F03, full insert sequence Length = 1257 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 tcatcggcgccggcagcggcggcg 284 ||||||||| |||||||||||||| Sbjct: 559 tcatcggcggcggcagcggcggcg 582
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cgccgccgcagacgacggcg 236 |||||||||||||||||||| Sbjct: 31943 cgccgccgcagacgacggcg 31962
>emb|AL732350.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0101F08, complete sequence Length = 63897 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 tcgtcatcggcgccggcagcggcggcgt 285 |||||||||||| |||| |||||||||| Sbjct: 23288 tcgtcatcggcggcggcggcggcggcgt 23261
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 tcatcggcgccggcagcggcggcg 284 ||||||||| |||||||||||||| Sbjct: 22747 tcatcggcggcggcagcggcggcg 22724
>gb|AC092480.27| Mus musculus strain C57BL/6J chromosome 17 clone rp23-387f2, complete sequence Length = 213144 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aaagatccatccatccatcc 56 |||||||||||||||||||| Sbjct: 156160 aaagatccatccatccatcc 156141
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 tcatcggcgccggcagcggcggcg 284 ||||||||| |||||||||||||| Sbjct: 22704510 tcatcggcggcggcagcggcggcg 22704533
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 tcatcggcgccggcagcggcggcg 284 ||||||||| |||||||||||||| Sbjct: 89798 tcatcggcggcggcagcggcggcg 89775
>emb|AL928745.3|CNS08CBI Oryza sativa chromosome 12, . BAC OSJNBb0092G12 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131603 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 tcatcggcgccggcagcggcggcg 284 ||||||||| |||||||||||||| Sbjct: 88169 tcatcggcggcggcagcggcggcg 88192 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,660,218 Number of Sequences: 3902068 Number of extensions: 3660218 Number of successful extensions: 314127 Number of sequences better than 10.0: 125 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 310025 Number of HSP's gapped (non-prelim): 4103 length of query: 419 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 397 effective length of database: 17,147,199,772 effective search space: 6807438309484 effective search space used: 6807438309484 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
