ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart53e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK065692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 1e-56
2ref|NM_191854.1| Oryza sativa (japonica cultivar-group), predic... 155 1e-34
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
4dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
5dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
6ref|NM_191855.1| Oryza sativa (japonica cultivar-group), predic... 60 6e-06
7gb|AC103783.2| Homo sapiens chromosome 8, clone RP11-664D7, comp... 48 0.023
8gb|AY450543.1| Human rhinovirus 84 polyprotein mRNA, partial cds 44 0.36
9gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 1.4
10emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome... 42 1.4
11emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 1.4
12gb|AC118231.9| Mus musculus chromosome 5, clone RP23-462J24, com... 42 1.4
13gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 42 1.4
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
15dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
16dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
17dbj|AP006375.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 1.4
18dbj|AP006094.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 1.4
19gb|DQ167575.2| Capra hircus myostatin gene, complete cds 40 5.5
20gb|AY386264.1| Orf virus strain OV-SA00, complete genome 40 5.5
21gb|AY386263.1| Orf virus strain OV-IA82, complete genome 40 5.5
22ref|XM_817810.1| Trypanosoma brucei TREU927 chaperone protein Dn... 40 5.5
23emb|AL607023.3| Human DNA sequence from clone RP11-65E10 on chro... 40 5.5
24emb|AL031290.1|HS774I24 Human DNA sequence from clone RP4-774I24... 40 5.5
25emb|BX324007.16| Zebrafish DNA sequence from clone CH211-233C16 ... 40 5.5
26gb|DQ184476.1| Orf virus strain NZ2, complete genome 40 5.5
27gb|AY186732.1| Orf virus strain D1701 ankyrin-repeat protein ANK... 40 5.5
28gb|AY032689.1| Capra hircus myostatin (MSTN) gene, exons 2 and 3... 40 5.5
29gb|AE010301.1| Leptospira interrogans serovar Lai str. 56601 chr... 40 5.5
30gb|AF266758.1|AF266758 Ovis aries myostatin (MSTN) gene, exons 2... 40 5.5
31emb|BX004808.5| Zebrafish DNA sequence from clone CH211-51B23 in... 40 5.5
32gb|AE016824.1| Leptospira interrogans serovar Copenhageni str. F... 40 5.5
33gb|U29944.1|OVU29944 Orf virus protein kinase homolog and F9L ho... 40 5.5

>dbj|AK065692.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038H22, full
           insert sequence
          Length = 1067

 Score =  228 bits (115), Expect = 1e-56
 Identities = 184/207 (88%)
 Strand = Plus / Plus

                                                                       
Query: 203 gctttcgccatgtcgaggctgcgggcgctctggcaagcttccgtgaacgctaccaagaga 262
           ||||||||||||||||||||||||||||| |||||||| ||||| ||||| |||| | ||
Sbjct: 128 gctttcgccatgtcgaggctgcgggcgctgtggcaagcctccgttaacgccaccaggcga 187

                                                                       
Query: 263 gctgttgtatggaattcagaagatttatttccaccaagtgaaagatacatcttcaatttc 322
           ||  |||| ||||||||||||||  || | |||||||||||||  |||||||||||||| 
Sbjct: 188 gccattgtgtggaattcagaagacctaatcccaccaagtgaaaagtacatcttcaatttt 247

                                                                       
Query: 323 aattcaaaagatgaggtgaagaagtggcacttgtactcggattcagagtatggaggttta 382
           ||||||||||||||| |||| | |||||||||||| || ||||| |||||||||||||||
Sbjct: 248 aattcaaaagatgagctgaaaaggtggcacttgtattcagattccgagtatggaggttta 307

                                      
Query: 383 tcatctgcatcactggagataactgat 409
           |||||||||||| ||||||||||||||
Sbjct: 308 tcatctgcatcattggagataactgat 334



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>ref|NM_191854.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 192

 Score =  155 bits (78), Expect = 1e-34
 Identities = 144/166 (86%)
 Strand = Plus / Plus

                                                                       
Query: 212 atgtcgaggctgcgggcgctctggcaagcttccgtgaacgctaccaagagagctgttgta 271
           |||||||||||||||||||| |||||||| ||||| ||||| |||| | ||||  |||| 
Sbjct: 1   atgtcgaggctgcgggcgctgtggcaagcctccgttaacgccaccaggcgagccattgtg 60

                                                                       
Query: 272 tggaattcagaagatttatttccaccaagtgaaagatacatcttcaatttcaattcaaaa 331
           ||||||||||||||  || | |||||||||||||  |||||||||||||| |||||||||
Sbjct: 61  tggaattcagaagacctaatcccaccaagtgaaaagtacatcttcaattttaattcaaaa 120

                                                         
Query: 332 gatgaggtgaagaagtggcacttgtactcggattcagagtatggag 377
           |||||| |||| | |||||||||||| || ||||| ||||||||||
Sbjct: 121 gatgagctgaaaaggtggcacttgtattcagattccgagtatggag 166



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  113 bits (57), Expect = 5e-22
 Identities = 99/113 (87%)
 Strand = Plus / Plus

                                                                            
Query: 267      ttgtatggaattcagaagatttatttccaccaagtgaaagatacatcttcaatttcaatt 326
                |||| ||||||||||||||  || | |||||||||||||  |||||||||||||| ||||
Sbjct: 30314766 ttgtgtggaattcagaagacctaatcccaccaagtgaaaagtacatcttcaattttaatt 30314825

                                                                     
Query: 327      caaaagatgaggtgaagaagtggcacttgtactcggattcagagtatggaggt 379
                ||||||||||| |||| | |||||||||||| || ||||| ||||||||||||
Sbjct: 30314826 caaaagatgagctgaaaaggtggcacttgtattcagattccgagtatggaggt 30314878



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                       
Query: 203      gctttcgccatgtcgaggctgcgggcgctctggcaagcttccgtgaacgctacca 257
                ||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||
Sbjct: 30314293 gctttcgccatgtcgaggctgcgggcgctgtggcaagcctccgttaacgccacca 30314347



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 376      aggtttatcatctgcatcactggagataactgat 409
                ||||||||||||||||||| ||||||||||||||
Sbjct: 30315874 aggtttatcatctgcatcattggagataactgat 30315907



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>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0042A10
          Length = 146840

 Score =  113 bits (57), Expect = 5e-22
 Identities = 99/113 (87%)
 Strand = Plus / Plus

                                                                          
Query: 267    ttgtatggaattcagaagatttatttccaccaagtgaaagatacatcttcaatttcaatt 326
              |||| ||||||||||||||  || | |||||||||||||  |||||||||||||| ||||
Sbjct: 103085 ttgtgtggaattcagaagacctaatcccaccaagtgaaaagtacatcttcaattttaatt 103144

                                                                   
Query: 327    caaaagatgaggtgaagaagtggcacttgtactcggattcagagtatggaggt 379
              ||||||||||| |||| | |||||||||||| || ||||| ||||||||||||
Sbjct: 103145 caaaagatgagctgaaaaggtggcacttgtattcagattccgagtatggaggt 103197



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                     
Query: 203    gctttcgccatgtcgaggctgcgggcgctctggcaagcttccgtgaacgctacca 257
              ||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||
Sbjct: 102612 gctttcgccatgtcgaggctgcgggcgctgtggcaagcctccgttaacgccacca 102666



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                
Query: 376    aggtttatcatctgcatcactggagataactgat 409
              ||||||||||||||||||| ||||||||||||||
Sbjct: 104193 aggtttatcatctgcatcattggagataactgat 104226



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>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           PAC clone:P0456A01
          Length = 143710

 Score =  113 bits (57), Expect = 5e-22
 Identities = 99/113 (87%)
 Strand = Plus / Plus

                                                                       
Query: 267 ttgtatggaattcagaagatttatttccaccaagtgaaagatacatcttcaatttcaatt 326
           |||| ||||||||||||||  || | |||||||||||||  |||||||||||||| ||||
Sbjct: 493 ttgtgtggaattcagaagacctaatcccaccaagtgaaaagtacatcttcaattttaatt 552

                                                                
Query: 327 caaaagatgaggtgaagaagtggcacttgtactcggattcagagtatggaggt 379
           ||||||||||| |||| | |||||||||||| || ||||| ||||||||||||
Sbjct: 553 caaaagatgagctgaaaaggtggcacttgtattcagattccgagtatggaggt 605



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 203 gctttcgccatgtcgaggctgcgggcgctctggcaagcttccgtgaacgctacca 257
           ||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||
Sbjct: 20  gctttcgccatgtcgaggctgcgggcgctgtggcaagcctccgttaacgccacca 74



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                              
Query: 376  aggtttatcatctgcatcactggagataactgat 409
            ||||||||||||||||||| ||||||||||||||
Sbjct: 1601 aggtttatcatctgcatcattggagataactgat 1634



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>ref|NM_191855.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 735

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 376 aggtttatcatctgcatcactggagataactgat 409
           ||||||||||||||||||| ||||||||||||||
Sbjct: 638 aggtttatcatctgcatcattggagataactgat 605



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>gb|AC103783.2| Homo sapiens chromosome 8, clone RP11-664D7, complete sequence
          Length = 109941

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 319   tttcaattcaaaagatgaggtgaagaag 346
             |||||||| |||||||||||||||||||
Sbjct: 84676 tttcaattaaaaagatgaggtgaagaag 84649



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>gb|AY450543.1| Human rhinovirus 84 polyprotein mRNA, partial cds
          Length = 1356

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 301 tgaaagatacatcttcaatttc 322
           ||||||||||||||||||||||
Sbjct: 195 tgaaagatacatcttcaatttc 216



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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 211     catgtcgaggctgcgggcgctctgg 235
               ||||||||||||||||||| |||||
Sbjct: 1726071 catgtcgaggctgcgggcggtctgg 1726095



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>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13
          Length = 348264

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 211    catgtcgaggctgcgggcgctctgg 235
              ||||||||||||||||||| |||||
Sbjct: 342874 catgtcgaggctgcgggcggtctgg 342898



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>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             6/14
          Length = 300050

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 211   catgtcgaggctgcgggcgctctgg 235
             ||||||||||||||||||| |||||
Sbjct: 95930 catgtcgaggctgcgggcggtctgg 95954



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>gb|AC118231.9| Mus musculus chromosome 5, clone RP23-462J24, complete sequence
          Length = 186083

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   ttcaatttcaattcaaaagat 334
             |||||||||||||||||||||
Sbjct: 90338 ttcaatttcaattcaaaagat 90318



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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 40     gccgacccgccgcctccggcg 60
              |||||||||||||||||||||
Sbjct: 981098 gccgacccgccgcctccggcg 981078



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 32       tcgctgtcgccgacccgccgcctcc 56
                |||| ||||||||||||||||||||
Sbjct: 28451452 tcgccgtcgccgacccgccgcctcc 28451476



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>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1148_D05
          Length = 155146

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 32    tcgctgtcgccgacccgccgcctcc 56
             |||| ||||||||||||||||||||
Sbjct: 75573 tcgccgtcgccgacccgccgcctcc 75597



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>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0017H11
          Length = 158374

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 32    tcgctgtcgccgacccgccgcctcc 56
             |||| ||||||||||||||||||||
Sbjct: 20293 tcgccgtcgccgacccgccgcctcc 20317



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>dbj|AP006375.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT32M04, TM0219,
             complete sequence
          Length = 72880

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 267   ttgtatggaattcagaagatttatt 291
             |||||||| ||||||||||||||||
Sbjct: 60628 ttgtatgggattcagaagatttatt 60604



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>dbj|AP006094.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39H01, TM0172,
             complete sequence
          Length = 127731

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 267   ttgtatggaattcagaagatttatt 291
             |||||||| ||||||||||||||||
Sbjct: 38304 ttgtatgggattcagaagatttatt 38280



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 267   ttgtatggaattcagaagatttatt 291
             |||||||| ||||||||||||||||
Sbjct: 26019 ttgtatgggattcagaagatttatt 25995



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>gb|DQ167575.2| Capra hircus myostatin gene, complete cds
          Length = 5211

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  ttcaatttcaattcaaaaga 333
            ||||||||||||||||||||
Sbjct: 3080 ttcaatttcaattcaaaaga 3061



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>gb|AY386264.1| Orf virus strain OV-SA00, complete genome
          Length = 139962

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 46     ccgccgcctccggcgagagcgactccgc 73
              |||||||||||||||||| ||| |||||
Sbjct: 133503 ccgccgcctccggcgagatcgagtccgc 133476



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>gb|AY386263.1| Orf virus strain OV-IA82, complete genome
          Length = 137241

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 46     ccgccgcctccggcgagagcgactccgc 73
              |||||||||||||||||| ||| |||||
Sbjct: 132463 ccgccgcctccggcgagatcgagtccgc 132436



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>ref|XM_817810.1| Trypanosoma brucei TREU927 chaperone protein DnaJ (Tb10.70.0170)
           partial mRNA
          Length = 825

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 60  gagagcgactccgcctcaca 79
           ||||||||||||||||||||
Sbjct: 746 gagagcgactccgcctcaca 727



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>emb|AL607023.3| Human DNA sequence from clone RP11-65E10 on chromosome 10 Contains part
              of the gene for alpha-catenin-like protein (MGC26194)
              (VR22), complete sequence
          Length = 132396

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    aagatacatcttcaatttca 323
              ||||||||||||||||||||
Sbjct: 110111 aagatacatcttcaatttca 110130



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>emb|AL031290.1|HS774I24 Human DNA sequence from clone RP4-774I24 on chromosome 1q24.1-24.3
              Contains the 3' end of the PLAC3 gene for placenta-specific
              3 (PLAC3) and the 3' end of the ASTN gene for astrotactin,
              complete sequence
          Length = 121780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 311    atcttcaatttcaattcaaaagat 334
              ||||||||||||||||||| ||||
Sbjct: 106085 atcttcaatttcaattcaacagat 106108



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>emb|BX324007.16| Zebrafish DNA sequence from clone CH211-233C16 in linkage group 16,
             complete sequence
          Length = 165294

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 304   aagatacatcttcaatttcaattcaaaa 331
             ||||||||| ||||||||||| ||||||
Sbjct: 80117 aagatacattttcaatttcaaatcaaaa 80144



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>gb|DQ184476.1| Orf virus strain NZ2, complete genome
          Length = 137820

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 46     ccgccgcctccggcgagagcgactccgc 73
              |||||||||||||||||| ||| |||||
Sbjct: 132742 ccgccgcctccggcgagatcgagtccgc 132715



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>gb|AY186732.1| Orf virus strain D1701 ankyrin-repeat protein ANK-1 (ANK-1),
            interleukin 10 (IL-10), ankyrin-repeat protein ANK-2
            (ANK-2), ankyrin-repeat protein ANK-3 (ANK-3), vaccinia
            virus F10L-like protein (F10L), vaccinia virus F9L-like
            protein (F9L), vascular endothelial growth factor-like
            protein (VEGF-E), and ORF3 genes, complete cds
          Length = 9979

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 46   ccgccgcctccggcgagagcgactccgc 73
            |||||||||||||||||| ||| |||||
Sbjct: 6684 ccgccgcctccggcgagatcgagtccgc 6657



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>gb|AY032689.1| Capra hircus myostatin (MSTN) gene, exons 2 and 3 and partial cds
          Length = 2584

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 314 ttcaatttcaattcaaaaga 333
           ||||||||||||||||||||
Sbjct: 461 ttcaatttcaattcaaaaga 442



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>gb|AE010301.1| Leptospira interrogans serovar Lai str. 56601 chromosome II, complete
             sequence
          Length = 358943

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 318   atttcaattcaaaagatgaggtgaagaa 345
             ||||||| |||||||| |||||||||||
Sbjct: 12478 atttcaaatcaaaagaggaggtgaagaa 12505



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>gb|AF266758.1|AF266758 Ovis aries myostatin (MSTN) gene, exons 2 and 3 and partial cds
          Length = 2603

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 314 ttcaatttcaattcaaaaga 333
           ||||||||||||||||||||
Sbjct: 462 ttcaatttcaattcaaaaga 443



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>emb|BX004808.5| Zebrafish DNA sequence from clone CH211-51B23 in linkage group 16,
             complete sequence
          Length = 184760

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 304   aagatacatcttcaatttcaattcaaaa 331
             ||||||||| ||||||||||| ||||||
Sbjct: 85785 aagatacattttcaatttcaaatcaaaa 85758



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>gb|AE016824.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130,
             chromosome II, complete sequence
          Length = 350181

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 318   atttcaattcaaaagatgaggtgaagaa 345
             ||||||| |||||||| |||||||||||
Sbjct: 12452 atttcaaatcaaaagaggaggtgaagaa 12479



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>gb|U29944.1|OVU29944 Orf virus protein kinase homolog and F9L homolog genes, complete cds
          Length = 2211

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 46   ccgccgcctccggcgagagcgactccgc 73
            |||||||||||||||||| ||| |||||
Sbjct: 1026 ccgccgcctccggcgagatcgagtccgc 999


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,251,480
Number of Sequences: 3902068
Number of extensions: 3251480
Number of successful extensions: 58659
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58485
Number of HSP's gapped (non-prelim): 174
length of query: 414
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 392
effective length of database: 17,147,199,772
effective search space: 6721702310624
effective search space used: 6721702310624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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