>ref|XM_466311.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1251

 Score = 60.0 bits (30), Expect = 8e-07
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 2   ggacgtcgacctcggcgcctactccgcccgcctctacctgcc 43
           ||||||| ||||||||| ||||||||| ||||||||||||||
Sbjct: 282 ggacgtccacctcggcgactactccgcgcgcctctacctgcc 323

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 8e-07
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                          
Query: 2        ggacgtcgacctcggcgcctactccgcccgcctctacctgcc 43
                ||||||| ||||||||| ||||||||| ||||||||||||||
Sbjct: 21607441 ggacgtccacctcggcgactactccgcgcgcctctacctgcc 21607482



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 47      agccgccgcgaccaccacg 65
               |||||||||||||||||||
Sbjct: 2278437 agccgccgcgaccaccacg 2278419

>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0020D05
          Length = 158760

 Score = 60.0 bits (30), Expect = 8e-07
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 2     ggacgtcgacctcggcgcctactccgcccgcctctacctgcc 43
             ||||||| ||||||||| ||||||||| ||||||||||||||
Sbjct: 96391 ggacgtccacctcggcgactactccgcgcgcctctacctgcc 96432

>dbj|AK105793.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H09, full
           insert sequence
          Length = 1251

 Score = 60.0 bits (30), Expect = 8e-07
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 2   ggacgtcgacctcggcgcctactccgcccgcctctacctgcc 43
           ||||||| ||||||||| ||||||||| ||||||||||||||
Sbjct: 282 ggacgtccacctcggcgactactccgcgcgcctctacctgcc 323

>gb|BT018514.1| Zea mays clone EL01N0430E04.d mRNA sequence
          Length = 1271

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 1   aggacgtcgacctcggcgcctactccgcccgcctctacctgccc 44
           |||||||| |||||||| |||||||||| || ||||||||||||
Sbjct: 232 aggacgtccacctcggctcctactccgcgcggctctacctgccc 275

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.003
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 41       gcccgcagccgccgcgaccaccac 64
                ||||||||||||||||||||||||
Sbjct: 22154964 gcccgcagccgccgcgaccaccac 22154987

>dbj|AP005658.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0620D11
          Length = 140245

 Score = 48.1 bits (24), Expect = 0.003
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 41    gcccgcagccgccgcgaccaccac 64
             ||||||||||||||||||||||||
Sbjct: 72263 gcccgcagccgccgcgaccaccac 72286

>ref|XM_812647.1| Trypanosoma cruzi strain CL Brener hypothetical protein
          (Tc00.1047053511211.190) partial mRNA
          Length = 1200

 Score = 42.1 bits (21), Expect = 0.19
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 43 ccgcagccgccgcgaccaccacgac 67
          ||||||||||||| |||||||||||
Sbjct: 55 ccgcagccgccgccaccaccacgac 31

>ref|NM_179924.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/
           helicase/ nucleic acid binding AT2G35920 mRNA, complete
           cds
          Length = 3371

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 43  ccgcagccgccgcgaccaccacgacgac 70
           |||| ||||||||| |||||||||||||
Sbjct: 163 ccgccgccgccgcgtccaccacgacgac 136

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 42      cccgcagccgccgcgaccac 61
               ||||||||||||||||||||
Sbjct: 2255087 cccgcagccgccgcgaccac 2255068

>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11,
              complete sequence
          Length = 156647

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     cccgcagccgccgcgaccac 61
              ||||||||||||||||||||
Sbjct: 145381 cccgcagccgccgcgaccac 145362

>gb|AY070430.1| Arabidopsis thaliana At2g35920 mRNA sequence
          Length = 3304

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 43  ccgcagccgccgcgaccaccacgacgac 70
           |||| ||||||||| |||||||||||||
Sbjct: 163 ccgccgccgccgcgtccaccacgacgac 136

>emb|AJ438997.1|PHY438997 Pimpla hypochondriaca mRNA for cysteine-rich venom protein 6
          (cvp6 gene)
          Length = 327

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 50 cgccgcgaccaccacgacga 69
          ||||||||||||||||||||
Sbjct: 48 cgccgcgaccaccacgacga 29

>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete
             sequence
          Length = 120938

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 43    ccgcagccgccgcgaccaccacgacgac 70
             |||| ||||||||| |||||||||||||
Sbjct: 81269 ccgccgccgccgcgtccaccacgacgac 81296

>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0081A17, from chromosome 3, complete sequence
          Length = 134821

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    cccgcagccgccgcgaccac 61
             ||||||||||||||||||||
Sbjct: 70969 cccgcagccgccgcgaccac 70988

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 42      cccgcagccgccgcgaccac 61
               ||||||||||||||||||||
Sbjct: 2255099 cccgcagccgccgcgaccac 2255080

>dbj|AK100092.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003L18, full
           insert sequence
          Length = 2062

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  cccgcagccgccgcgaccac 61
           ||||||||||||||||||||
Sbjct: 348 cccgcagccgccgcgaccac 329

>dbj|AK068968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002J01, full
           insert sequence
          Length = 2064

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  cccgcagccgccgcgaccac 61
           ||||||||||||||||||||
Sbjct: 348 cccgcagccgccgcgaccac 329

>gb|L27277.1|MLURHO Micrococcus luteus Rho factor (rho) gene, complete cds
          Length = 2402

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 43   ccgcagccgccgcgaccaccacgacgac 70
            |||||||||||||||| ||| |||||||
Sbjct: 1067 ccgcagccgccgcgacgaccgcgacgac 1094

>gb|AY661566.1| Saccharopolyspora erythraea polyketide synthase gene cluster, complete
             sequence
          Length = 32299

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    acctcggcgcctactccgc 28
             |||||||||||||||||||
Sbjct: 30870 acctcggcgcctactccgc 30888

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 7       tcgacctcggcgcctactc 25
               |||||||||||||||||||
Sbjct: 1793662 tcgacctcggcgcctactc 1793644

>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 48      gccgccgcgaccaccacgacgac 70
               ||||||||| |||||||||||||
Sbjct: 1915234 gccgccgcggccaccacgacgac 1915256

>gb|AC148878.2| Chlamydomonas reinhardtii clone cr-29B2, complete sequence
          Length = 64153

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    cctgcccgcagccgccgcg 56
             |||||||||||||||||||
Sbjct: 24592 cctgcccgcagccgccgcg 24610

>ref|XM_850321.1| PREDICTED: Canis familiaris similar to CASK-interacting protein
           CIP98 (LOC612588), mRNA
          Length = 2817

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 33  ctctacctgcccgcagccgccgc 55
           |||||||||||||| ||||||||
Sbjct: 370 ctctacctgcccgccgccgccgc 392

>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13
          Length = 347496

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     tcgacctcggcgcctactc 25
             |||||||||||||||||||
Sbjct: 71498 tcgacctcggcgcctactc 71480

>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14
          Length = 300050

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 7      tcgacctcggcgcctactc 25
              |||||||||||||||||||
Sbjct: 174121 tcgacctcggcgcctactc 174103

>dbj|AB227526.1| Aspergillus oryzae cDNA, contig sequence: AoEST4395
          Length = 686

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 48  gccgccgcgaccaccacgacgac 70
           ||||||||||| |||||||||||
Sbjct: 154 gccgccgcgacgaccacgacgac 132

>dbj|AB226186.1| Aspergillus oryzae cDNA, contig sequence: AoEST3045
          Length = 1121

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 48  gccgccgcgaccaccacgacgac 70
           ||||||||||| |||||||||||
Sbjct: 208 gccgccgcgacgaccacgacgac 186

>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 48     gccgccgcgaccaccacgacgac 70
              ||||||||||| |||||||||||
Sbjct: 590772 gccgccgcgacgaccacgacgac 590794

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 48      gccgccgcgaccaccacga 66
               |||||||||||||||||||
Sbjct: 8024890 gccgccgcgaccaccacga 8024908

>dbj|AP005776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0018G11
          Length = 121084

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 47    agccgccgcgaccaccacg 65
             |||||||||||||||||||
Sbjct: 14514 agccgccgcgaccaccacg 14496

>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1123_E07
          Length = 113187

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 47    agccgccgcgaccaccacg 65
             |||||||||||||||||||
Sbjct: 65386 agccgccgcgaccaccacg 65368

>emb|X56107.1|SEERYA S. erythraea eryA gene for 6-deoxyerythronolide B synthase
          Length = 9769

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 10   acctcggcgcctactccgc 28
            |||||||||||||||||||
Sbjct: 8164 acctcggcgcctactccgc 8182

>emb|X62569.1|SEERYABS S.erythraea eryA gene for 6-deoxyerythronolyde B synthase II & III
          Length = 20444

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    acctcggcgcctactccgc 28
             |||||||||||||||||||
Sbjct: 18839 acctcggcgcctactccgc 18857

>emb|AJ242540.1|VCA242540 Volvox carteri mRNA for hydroxyproline-rich glycoprotein (HRGP gene)
          Length = 1230

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 48   gccgccgcgaccaccacgacgac 70
            |||||||||||||||||| ||||
Sbjct: 1122 gccgccgcgaccaccacgccgac 1144

>dbj|AK069573.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022E20, full
            insert sequence
          Length = 2620

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 47   agccgccgcgaccaccacg 65
            |||||||||||||||||||
Sbjct: 1397 agccgccgcgaccaccacg 1379

>gb|AD000019.1|MSGY223 Mycobacterium tuberculosis sequence from clone y223
          Length = 42061

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     tcgacctcggcgcctactc 25
             |||||||||||||||||||
Sbjct: 36360 tcgacctcggcgcctactc 36378

>gb|M63677.1|SERERYAB S.erythraea second and third ORF's of eryA gene, complete cds
          Length = 20235

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    acctcggcgcctactccgc 28
             |||||||||||||||||||
Sbjct: 18806 acctcggcgcctactccgc 18824


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 454,989
Number of Sequences: 3902068
Number of extensions: 454989
Number of successful extensions: 41458
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40916
Number of HSP's gapped (non-prelim): 542
length of query: 74
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 53
effective length of database: 17,151,101,840
effective search space: 909008397520
effective search space used: 909008397520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)