ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart53d03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY589579.1| Triticum aestivum beta-expansin TaEXPB2 mRNA, complete cds Length = 897 Score = 339 bits (171), Expect = 2e-90 Identities = 224/241 (92%), Gaps = 3/241 (1%) Strand = Plus / Plus Query: 1 ctcctctctcgtctaaggccgttgcactcgttgcactgtcctccctcctcgtcacctacg 60 ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 42 ctcctctttcgtccaaggccgttgcactcgttgcactgttctccctcctcgtcacctacg 101 Query: 61 ccgctgccggcgccgggaccttcaacgattccgccttcaccgccgaccccaactgggagg 120 |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 102 ccgc---cggcgccgggaacttcaacgactccgccttcaccgccgaccccaactgggagg 158 Query: 121 acgccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtg 180 ||||||||||||||||||||||||| ||||| || |||||||| ||||| ||||||| Sbjct: 159 acgccagggccacctggtacggcgcccccaccggcgccggccctgacgacgaaggtggtg 218 Query: 181 cgtgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacg 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 cctgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacg 278 Query: 241 a 241 | Sbjct: 279 a 279
>gb|AY543538.1| Triticum aestivum expansin EXPB3 mRNA, complete cds Length = 834 Score = 339 bits (171), Expect = 2e-90 Identities = 224/241 (92%), Gaps = 3/241 (1%) Strand = Plus / Plus Query: 1 ctcctctctcgtctaaggccgttgcactcgttgcactgtcctccctcctcgtcacctacg 60 ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 21 ctcctctttcgtccaaggccgttgcactcgttgcactgttctccctcctcgtcacctacg 80 Query: 61 ccgctgccggcgccgggaccttcaacgattccgccttcaccgccgaccccaactgggagg 120 |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 81 ccgc---cggcgccgggaacttcaacgactccgccttcaccgccgaccccaactgggagg 137 Query: 121 acgccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtg 180 ||||||||||||||||||||||||| ||||| || |||||||| ||||| ||||||| Sbjct: 138 acgccagggccacctggtacggcgcccccaccggcgccggccctgacgacgatggtggtg 197 Query: 181 cgtgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacg 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 cctgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacg 257 Query: 241 a 241 | Sbjct: 258 a 258
>gb|AY543536.1| Triticum aestivum expansin EXPB1 mRNA, complete cds Length = 810 Score = 339 bits (171), Expect = 2e-90 Identities = 224/241 (92%), Gaps = 3/241 (1%) Strand = Plus / Plus Query: 1 ctcctctctcgtctaaggccgttgcactcgttgcactgtcctccctcctcgtcacctacg 60 ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 15 ctcctctttcgtccaaggccgttgcactcgttgcactgttctccctcctcgtcacctacg 74 Query: 61 ccgctgccggcgccgggaccttcaacgattccgccttcaccgccgaccccaactgggagg 120 |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 75 ccgc---cggcgccgggaacttcaacgactccgccttcaccgccgaccccaactgggagg 131 Query: 121 acgccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtg 180 ||||||||||||||||||||||||| ||||| || |||||||| ||||| ||||||| Sbjct: 132 acgccagggccacctggtacggcgcccccaccggcgccggccctgacgacgatggtggtg 191 Query: 181 cgtgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacg 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 cctgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacg 251 Query: 241 a 241 | Sbjct: 252 a 252
>emb|AJ295942.1|FPR295942 Festuca pratensis mRNA for beta expansin B3 (expB3 gene) Length = 1219 Score = 212 bits (107), Expect = 4e-52 Identities = 152/167 (91%) Strand = Plus / Plus Query: 75 gggaccttcaacgattccgccttcaccgccgaccccaactgggaggacgccagggccacc 134 |||| |||||||| ||||| ||||||||| ||||| |||||||||| ||||||||||||| Sbjct: 187 gggaacttcaacgcttccgacttcaccgctgaccctaactgggaggccgccagggccacc 246 Query: 135 tggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcgggttcaag 194 |||||||||||||| || || |||||||| ||||||||||| || ||||||||||||||| Sbjct: 247 tggtacggcgcgccaaccggcgccggccctatggacgacggcggcgcgtgcgggttcaag 306 Query: 195 aacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 307 aacacgaaccagtaccccttctcctccatgacttcctgcggcaacga 353
>ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB3 (OSJNBb0014I11.1), mRNA Length = 904 Score = 151 bits (76), Expect = 1e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 90 tccgccttcaccgccgaccccaactgggaggacgccagggccacctggtacggcgcgccc 149 |||| |||||||||||| ||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 197 tccgacttcaccgccgatcccaactgggaagtcgccagggccacctggtacggcgctccc 256 Query: 150 acgggtgccggccccatggacgacggtggtgcgtgcgggttcaagaacaccaaccagtac 209 || || |||||||| ||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 257 accggcgccggccctgacgacgatggcggtgcttgcgggttcaagaacaccaaccagtac 316 Query: 210 cccttctcctccatgacatcgtgcggcaacga 241 || ||||| || ||||| || ||||||||||| Sbjct: 317 ccgttctcgtcgatgacctcctgcggcaacga 348
>gb|AF261271.1| Oryza sativa beta-expansin (EXPB3) mRNA, complete cds Length = 1319 Score = 151 bits (76), Expect = 1e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 90 tccgccttcaccgccgaccccaactgggaggacgccagggccacctggtacggcgcgccc 149 |||| |||||||||||| ||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 196 tccgacttcaccgccgatcccaactgggaagtcgccagggccacctggtacggcgctccc 255 Query: 150 acgggtgccggccccatggacgacggtggtgcgtgcgggttcaagaacaccaaccagtac 209 || || |||||||| ||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 256 accggcgccggccctgacgacgatggcggtgcttgcgggttcaagaacaccaaccagtac 315 Query: 210 cccttctcctccatgacatcgtgcggcaacga 241 || ||||| || ||||| || ||||||||||| Sbjct: 316 ccgttctcgtcgatgacctcctgcggcaacga 347
>dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O05, full insert sequence Length = 1313 Score = 151 bits (76), Expect = 1e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 90 tccgccttcaccgccgaccccaactgggaggacgccagggccacctggtacggcgcgccc 149 |||| |||||||||||| ||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 208 tccgacttcaccgccgatcccaactgggaagtcgccagggccacctggtacggcgctccc 267 Query: 150 acgggtgccggccccatggacgacggtggtgcgtgcgggttcaagaacaccaaccagtac 209 || || |||||||| ||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 268 accggcgccggccctgacgacgatggcggtgcttgcgggttcaagaacaccaaccagtac 327 Query: 210 cccttctcctccatgacatcgtgcggcaacga 241 || ||||| || ||||| || ||||||||||| Sbjct: 328 ccgttctcgtcgatgacctcctgcggcaacga 359
>gb|AY104151.1| Zea mays PCO112411 mRNA sequence Length = 1171 Score = 127 bits (64), Expect = 2e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgc 181 ||||| |||||||||||||||||||||||| || ||||||||| ||| |||||||||| Sbjct: 248 cgccaaggccacctggtacggcgcgcccaccggcgccggccccgacgacaacggtggtgc 307 Query: 182 gtgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||||| ||||||||||||||| ||||| |||||||| || || |||||||| Sbjct: 308 gtgcgggttcaagggcaccaaccagtacccgttctcgtccatgacgtcctgtggcaacga 367
>gb|AY543542.1| Triticum aestivum expansin EXPB8 mRNA, complete cds Length = 1078 Score = 127 bits (64), Expect = 2e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgc 181 ||||| ||||||||||||||| |||||||| || ||||||||||||||| |||| ||||| Sbjct: 153 cgccaaggccacctggtacggtgcgcccaccggcgccggccccatggacaacggcggtgc 212 Query: 182 gtgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||| ||||||||| ||| |||||||||||||||||||||| || ||||||||||| Sbjct: 213 ttgcggcttcaagaacgtgaacaagtaccccttctcctccatgacgtcctgcggcaacga 272
>gb|AF332179.1|AF332179 Zea mays beta-expansin 6 (expB6) mRNA, complete cds Length = 1142 Score = 125 bits (63), Expect = 7e-26 Identities = 105/119 (88%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||||||||| ||||| || ||||||||| | ||| ||||||||||| Sbjct: 240 gccaaggccacctggtacggcgcccccaccggcgccggccccctcgacaacggtggtgcg 299 Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 |||||||||||| ||||||||||||||| ||||| |||||||| || || |||||||| Sbjct: 300 tgcgggttcaagggcaccaaccagtacccgttctcgtccatgacgtcctgtggcaacga 358
>ref|NM_197699.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB2 (OSJNBb0014I11.2), mRNA Length = 1262 Score = 93.7 bits (47), Expect = 2e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||||||| ||||| || ||||| ||| ||| |||| |||||| Sbjct: 169 gccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggcggtgcg 228 Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||| Sbjct: 229 tgcgggttcaagaacaccaaccagtacccgttcatgtccatgacctcctgcggcaacga 287
>gb|U95968.1|OSU95968 Oryza sativa beta-expansin (EXPB2) mRNA, complete cds Length = 999 Score = 93.7 bits (47), Expect = 2e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||||||| ||||| || ||||| ||| ||| |||| |||||| Sbjct: 169 gccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggcggtgcg 228 Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||| Sbjct: 229 tgcgggttcaagaacaccaaccagtacccgttcatgtccatgacctcctgcggcaacga 287
>dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F04, full insert sequence Length = 1043 Score = 93.7 bits (47), Expect = 2e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||||||| ||||| || ||||| ||| ||| |||| |||||| Sbjct: 168 gccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggcggtgcg 227 Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||| Sbjct: 228 tgcgggttcaagaacaccaaccagtacccgttcatgtccatgacctcctgcggcaacga 286
>dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C01, full insert sequence Length = 1259 Score = 93.7 bits (47), Expect = 2e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||||||| ||||| || ||||| ||| ||| |||| |||||| Sbjct: 166 gccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggcggtgcg 225 Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||| Sbjct: 226 tgcgggttcaagaacaccaaccagtacccgttcatgtccatgacctcctgcggcaacga 284
>dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F11, full insert sequence Length = 1026 Score = 93.7 bits (47), Expect = 2e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||||||| ||||| || ||||| ||| ||| |||| |||||| Sbjct: 159 gccaaggccacctggtacggccagcccaacggcgccggacccgacgacaacggcggtgcg 218 Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||| Sbjct: 219 tgcgggttcaagaacaccaaccagtacccgttcatgtccatgacctcctgcggcaacga 277
>emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansin B2 (expB2 gene) Length = 1194 Score = 91.7 bits (46), Expect = 9e-16 Identities = 97/114 (85%) Strand = Plus / Plus Query: 126 agggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgc 185 |||||||||||||||||||||||||| || ||||| ||| ||| | || || || ||| Sbjct: 224 agggccacctggtacggcgcgcccaccggcgccgggcccgacgacaatggcggcgcttgc 283 Query: 186 gggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaac 239 ||||||||| || |||||||||||||||||||||||||| || ||||||||| Sbjct: 284 gggttcaagcacgtgaaccagtaccccttctcctccatgacgtcctgcggcaac 337
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 91.7 bits (46), Expect = 9e-16 Identities = 67/74 (90%) Strand = Plus / Minus Query: 90 tccgccttcaccgccgaccccaactgggaggacgccagggccacctggtacggcgcgccc 149 |||| |||||||||||| ||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 5353 tccgacttcaccgccgatcccaactgggaagtcgccagggccacctggtacggcgctccc 5294 Query: 150 acgggtgccggccc 163 || || |||||||| Sbjct: 5293 accggcgccggccc 5280 Score = 81.8 bits (41), Expect = 9e-13 Identities = 59/65 (90%) Strand = Plus / Minus Query: 177 ggtgcgtgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggc 236 ||||| ||||||||||||||||||||||||||||| ||||| || ||||| || |||||| Sbjct: 5163 ggtgcttgcgggttcaagaacaccaaccagtacccgttctcgtcgatgacctcctgcggc 5104 Query: 237 aacga 241 ||||| Sbjct: 5103 aacga 5099 Score = 56.0 bits (28), Expect = 5e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 180 gcgtgcgggttcaagaacaccaaccagtaccc 211 ||||||||||||||| |||||||||||||||| Sbjct: 15311 gcgtgcgggttcaagcacaccaaccagtaccc 15342 Score = 44.1 bits (22), Expect = 0.20 Identities = 37/42 (88%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggcccc 164 ||||||||||||||||||||| ||||| || ||||||||| Sbjct: 15160 gccagggccacctggtacggccagcccaacggcgccggcccc 15201
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 91.7 bits (46), Expect = 9e-16 Identities = 67/74 (90%) Strand = Plus / Plus Query: 90 tccgccttcaccgccgaccccaactgggaggacgccagggccacctggtacggcgcgccc 149 |||| |||||||||||| ||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 4020 tccgacttcaccgccgatcccaactgggaagtcgccagggccacctggtacggcgctccc 4079 Query: 150 acgggtgccggccc 163 || || |||||||| Sbjct: 4080 accggcgccggccc 4093 Score = 81.8 bits (41), Expect = 9e-13 Identities = 59/65 (90%) Strand = Plus / Plus Query: 177 ggtgcgtgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggc 236 ||||||||||||||||||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 16208 ggtgcgtgcgggttcaagaacaccaaccagtacccgttcatgtccatgacctcctgcggc 16267 Query: 237 aacga 241 ||||| Sbjct: 16268 aacga 16272 Score = 81.8 bits (41), Expect = 9e-13 Identities = 59/65 (90%) Strand = Plus / Plus Query: 177 ggtgcgtgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggc 236 ||||| ||||||||||||||||||||||||||||| ||||| || ||||| || |||||| Sbjct: 4210 ggtgcttgcgggttcaagaacaccaaccagtacccgttctcgtcgatgacctcctgcggc 4269 Query: 237 aacga 241 ||||| Sbjct: 4270 aacga 4274 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 22257 tgcgggttcaagaacgtgaaccagtacccattctcgtccatgacctcctgcggcaacga 22315
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 91.7 bits (46), Expect = 9e-16 Identities = 67/74 (90%) Strand = Plus / Minus Query: 90 tccgccttcaccgccgaccccaactgggaggacgccagggccacctggtacggcgcgccc 149 |||| |||||||||||| ||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 21330339 tccgacttcaccgccgatcccaactgggaagtcgccagggccacctggtacggcgctccc 21330280 Query: 150 acgggtgccggccc 163 || || |||||||| Sbjct: 21330279 accggcgccggccc 21330266 Score = 81.8 bits (41), Expect = 9e-13 Identities = 59/65 (90%) Strand = Plus / Minus Query: 177 ggtgcgtgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggc 236 ||||| ||||||||||||||||||||||||||||| ||||| || ||||| || |||||| Sbjct: 21330149 ggtgcttgcgggttcaagaacaccaaccagtacccgttctcgtcgatgacctcctgcggc 21330090 Query: 237 aacga 241 ||||| Sbjct: 21330089 aacga 21330085 Score = 81.8 bits (41), Expect = 9e-13 Identities = 59/65 (90%) Strand = Plus / Minus Query: 177 ggtgcgtgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggc 236 ||||||||||||||||||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 21318151 ggtgcgtgcgggttcaagaacaccaaccagtacccgttcatgtccatgacctcctgcggc 21318092 Query: 237 aacga 241 ||||| Sbjct: 21318091 aacga 21318087 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 21312102 tgcgggttcaagaacgtgaaccagtacccattctcgtccatgacctcctgcggcaacga 21312044 Score = 56.0 bits (28), Expect = 5e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 180 gcgtgcgggttcaagaacaccaaccagtaccc 211 ||||||||||||||| |||||||||||||||| Sbjct: 21340298 gcgtgcgggttcaagcacaccaaccagtaccc 21340329 Score = 44.1 bits (22), Expect = 0.20 Identities = 37/42 (88%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggcccc 164 ||||||||||||||||||||| ||||| || ||||||||| Sbjct: 21340147 gccagggccacctggtacggccagcccaacggcgccggcccc 21340188 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggc 143 |||||||||||||||||||||| Sbjct: 20946033 cgccagggccacctggtacggc 20946054
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 91.7 bits (46), Expect = 9e-16 Identities = 67/74 (90%) Strand = Plus / Minus Query: 90 tccgccttcaccgccgaccccaactgggaggacgccagggccacctggtacggcgcgccc 149 |||| |||||||||||| ||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 21341603 tccgacttcaccgccgatcccaactgggaagtcgccagggccacctggtacggcgctccc 21341544 Query: 150 acgggtgccggccc 163 || || |||||||| Sbjct: 21341543 accggcgccggccc 21341530 Score = 81.8 bits (41), Expect = 9e-13 Identities = 59/65 (90%) Strand = Plus / Minus Query: 177 ggtgcgtgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggc 236 ||||| ||||||||||||||||||||||||||||| ||||| || ||||| || |||||| Sbjct: 21341413 ggtgcttgcgggttcaagaacaccaaccagtacccgttctcgtcgatgacctcctgcggc 21341354 Query: 237 aacga 241 ||||| Sbjct: 21341353 aacga 21341349 Score = 81.8 bits (41), Expect = 9e-13 Identities = 59/65 (90%) Strand = Plus / Minus Query: 177 ggtgcgtgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggc 236 ||||||||||||||||||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 21329415 ggtgcgtgcgggttcaagaacaccaaccagtacccgttcatgtccatgacctcctgcggc 21329356 Query: 237 aacga 241 ||||| Sbjct: 21329355 aacga 21329351 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 21323366 tgcgggttcaagaacgtgaaccagtacccattctcgtccatgacctcctgcggcaacga 21323308 Score = 56.0 bits (28), Expect = 5e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 180 gcgtgcgggttcaagaacaccaaccagtaccc 211 ||||||||||||||| |||||||||||||||| Sbjct: 21351561 gcgtgcgggttcaagcacaccaaccagtaccc 21351592 Score = 44.1 bits (22), Expect = 0.20 Identities = 37/42 (88%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggcccc 164 ||||||||||||||||||||| ||||| || ||||||||| Sbjct: 21351410 gccagggccacctggtacggccagcccaacggcgccggcccc 21351451 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggc 143 |||||||||||||||||||||| Sbjct: 20957297 cgccagggccacctggtacggc 20957318
>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4 (OSJNBa0010C11.2), mRNA Length = 1340 Score = 81.8 bits (41), Expect = 9e-13 Identities = 77/89 (86%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 ||||||||||||||||||||| ||||| || ||||||||| ||| |||| || ||| Sbjct: 279 gccagggccacctggtacggccagcccaacggcgccggccccgacgacaacggcggcgcg 338 Query: 183 tgcgggttcaagaacaccaaccagtaccc 211 |||||||||||| |||||||||||||||| Sbjct: 339 tgcgggttcaagcacaccaaccagtaccc 367
>gb|AF261272.1| Oryza sativa beta-expansin (EXPB4) mRNA, complete cds Length = 1249 Score = 81.8 bits (41), Expect = 9e-13 Identities = 77/89 (86%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 ||||||||||||||||||||| ||||| || ||||||||| ||| |||| || ||| Sbjct: 235 gccagggccacctggtacggccagcccaacggcgccggccccgacgacaacggcggcgcg 294 Query: 183 tgcgggttcaagaacaccaaccagtaccc 211 |||||||||||| |||||||||||||||| Sbjct: 295 tgcgggttcaagcacaccaaccagtaccc 323
>gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, complete cds Length = 1479 Score = 81.8 bits (41), Expect = 9e-13 Identities = 77/89 (86%) Strand = Plus / Plus Query: 127 gggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcg 186 ||||||||||||||||| ||||| || ||||||||| ||| ||||||| ||||||| Sbjct: 256 gggccacctggtacggccagcccaacggcgccggccccgacgacaacggtggcgcgtgcg 315 Query: 187 ggttcaagaacaccaaccagtaccccttc 215 | |||||| |||||||||||||||||||| Sbjct: 316 gattcaagcacaccaaccagtaccccttc 344
>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full insert sequence Length = 1290 Score = 81.8 bits (41), Expect = 9e-13 Identities = 77/89 (86%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 ||||||||||||||||||||| ||||| || ||||||||| ||| |||| || ||| Sbjct: 292 gccagggccacctggtacggccagcccaacggcgccggccccgacgacaacggcggcgcg 351 Query: 183 tgcgggttcaagaacaccaaccagtaccc 211 |||||||||||| |||||||||||||||| Sbjct: 352 tgcgggttcaagcacaccaaccagtaccc 380
>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full insert sequence Length = 1266 Score = 81.8 bits (41), Expect = 9e-13 Identities = 77/89 (86%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 ||||||||||||||||||||| ||||| || ||||||||| ||| |||| || ||| Sbjct: 285 gccagggccacctggtacggccagcccaacggcgccggccccgacgacaacggcggcgcg 344 Query: 183 tgcgggttcaagaacaccaaccagtaccc 211 |||||||||||| |||||||||||||||| Sbjct: 345 tgcgggttcaagcacaccaaccagtaccc 373
>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full insert sequence Length = 1475 Score = 81.8 bits (41), Expect = 9e-13 Identities = 77/89 (86%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 ||||||||||||||||||||| ||||| || ||||||||| ||| |||| || ||| Sbjct: 473 gccagggccacctggtacggccagcccaacggcgccggccccgacgacaacggcggcgcg 532 Query: 183 tgcgggttcaagaacaccaaccagtaccc 211 |||||||||||| |||||||||||||||| Sbjct: 533 tgcgggttcaagcacaccaaccagtaccc 561
>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full insert sequence Length = 1794 Score = 81.8 bits (41), Expect = 9e-13 Identities = 77/89 (86%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 ||||||||||||||||||||| ||||| || ||||||||| ||| |||| || ||| Sbjct: 291 gccagggccacctggtacggccagcccaacggcgccggccccgacgacaacggcggcgcg 350 Query: 183 tgcgggttcaagaacaccaaccagtaccc 211 |||||||||||| |||||||||||||||| Sbjct: 351 tgcgggttcaagcacaccaaccagtaccc 379
>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full insert sequence Length = 1293 Score = 81.8 bits (41), Expect = 9e-13 Identities = 77/89 (86%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 ||||||||||||||||||||| ||||| || ||||||||| ||| |||| || ||| Sbjct: 291 gccagggccacctggtacggccagcccaacggcgccggccccgacgacaacggcggcgcg 350 Query: 183 tgcgggttcaagaacaccaaccagtaccc 211 |||||||||||| |||||||||||||||| Sbjct: 351 tgcgggttcaagcacaccaaccagtaccc 379
>gb|AY107405.1| Zea mays PCO140045 mRNA sequence Length = 624 Score = 81.8 bits (41), Expect = 9e-13 Identities = 77/89 (86%) Strand = Plus / Plus Query: 127 gggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcg 186 ||||||||||||||||| ||||| || |||||||| ||| ||||||||||||||| Sbjct: 246 gggccacctggtacggccagcccaacggcgccggcccggacgacaacggtggtgcgtgcg 305 Query: 187 ggttcaagaacaccaaccagtaccccttc 215 | |||||| |||||||||||||||||||| Sbjct: 306 gcttcaagcacaccaaccagtaccccttc 334
>gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, complete cds Length = 948 Score = 81.8 bits (41), Expect = 9e-13 Identities = 98/117 (83%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||||||| || ||||||||| ||||| || ||||||||| ||| |||||||||| Sbjct: 201 gccagggcgacttggtacggccagcccaacggcgccggccccgacgacaacggtggtgcc 260 Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaac 239 ||||| |||||| |||||||||||||||| ||| | |||||||| || ||||||||| Sbjct: 261 tgcggcttcaagcacaccaaccagtacccgttcgcgtccatgacctcctgcggcaac 317
>gb|AY589582.1| Triticum aestivum beta-expansin TaEXPB5 mRNA, complete cds Length = 939 Score = 77.8 bits (39), Expect = 1e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgc 181 ||||| ||||||||||||||| ||||||| || ||||||||| ||| |||||||||| Sbjct: 170 cgccaaggccacctggtacggggcgcccaacggcgccggccccgacgacaacggtggtgc 229 Query: 182 gtgcgggttcaagaacaccaaccagtaccccttctcctccatg 224 ||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 230 ttgcggcttcaagaacgtgaaccagtacccaatctcctccatg 272
>gb|AY543544.1| Triticum aestivum expansin EXPB10 mRNA, complete cds Length = 1132 Score = 77.8 bits (39), Expect = 1e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgc 181 ||||| ||||||||||||||| ||||||| || ||||||||| ||| |||||||||| Sbjct: 145 cgccaaggccacctggtacggggcgcccaacggcgccggccccgacgacaacggtggtgc 204 Query: 182 gtgcgggttcaagaacaccaaccagtaccccttctcctccatg 224 ||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 205 ttgcggcttcaagaacgtgaaccagtacccaatctcctccatg 247
>gb|U91981.1|TAU91981 Triticum aestivum pollen allergen homolog mRNA, complete cds Length = 1232 Score = 75.8 bits (38), Expect = 6e-11 Identities = 86/102 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| ||||||||||||||| ||||||| || ||||||||| ||| |||||||||| Sbjct: 176 gccaaggccacctggtacggagcgcccaacggcgccggccccgacgacaacggtggtgct 235 Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatg 224 ||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 236 tgcggcttcaagaacgtgaaccagtacccaatctcctccatg 277
>gb|AF332180.1|AF332180 Zea mays beta-expansin 7 (expB7) mRNA, complete cds Length = 1173 Score = 73.8 bits (37), Expect = 2e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 97 tcaccgccgaccccaactgggaggacgccagggccacctggtacggcgcgcccacgggtg 156 |||||||||| ||| |||||| | |||||||||||||||||||| |||||||| || | Sbjct: 177 tcaccgccgatcccggctgggatgctgccagggccacctggtacggtgcgcccaccggcg 236 Query: 157 ccggccccatggacgacggtggtgcgtgcgggttcaagaac 197 ||||||| |||||||||||||| || || ||||||||| Sbjct: 237 ccggccctgatgacgacggtggtgcctgtggattcaagaac 277
>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds Length = 1013 Score = 73.8 bits (37), Expect = 2e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 ||||| || ||||||||||| ||||||| || ||||| ||| ||| |||| || ||| Sbjct: 188 gccagagcgacctggtacggagcgcccaacggcgccgggcccgacgacaacggcggcgcg 247 Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaac 239 ||||| |||||| || |||||||||||||||||||||||||| || ||||||||| Sbjct: 248 tgcggcttcaagcacgtgaaccagtaccccttctcctccatgacctcctgcggcaac 304
>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds Length = 1056 Score = 73.8 bits (37), Expect = 2e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 ||||| || ||||||||||| ||||||| || ||||| ||| ||| |||| || ||| Sbjct: 220 gccagagcgacctggtacggagcgcccaacggcgccgggcccgacgacaacggcggcgcg 279 Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaac 239 ||||| |||||| || |||||||||||||||||||||||||| || ||||||||| Sbjct: 280 tgcggcttcaagcacgtgaaccagtaccccttctcctccatgacctcctgcggcaac 336
>ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB6 (OSJNBb0014I11.3), mRNA Length = 1240 Score = 69.9 bits (35), Expect = 3e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 127 gggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcg 186 |||| |||||||| ||||| ||||| || |||||||| ||| |||| || || |||| Sbjct: 239 gggcaacctggtatggcgctcccaccggcgccggccctgacgacaacggcggcgcttgcg 298 Query: 187 ggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 299 ggttcaagaacgtgaaccagtacccattctcgtccatgacctcctgcggcaacga 353
>gb|AF261274.1| Oryza sativa beta-expansin (EXPB6) mRNA, complete cds Length = 1250 Score = 69.9 bits (35), Expect = 3e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 127 gggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcg 186 |||| |||||||| ||||| ||||| || |||||||| ||| |||| || || |||| Sbjct: 232 gggcaacctggtatggcgctcccaccggcgccggccctgacgacaacggcggcgcttgcg 291 Query: 187 ggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 292 ggttcaagaacgtgaaccagtacccattctcgtccatgacctcctgcggcaacga 346
>gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA, complete cds Length = 898 Score = 69.9 bits (35), Expect = 3e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||| |||||||||||||| || || ||||| ||| ||| |||||||||| Sbjct: 169 gccaaggccacatggtacggcgcgcctaccggcgccggtcccgatgacaacggtggtgct 228 Query: 183 tgcgggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||| | |||| |||| ||||||||||| ||| |||||||| || ||||||||||| Sbjct: 229 tgcggctacaagcacactaaccagtacccgttcatgtccatgacttcctgcggcaacga 287
>gb|AY589578.1| Triticum aestivum beta-expansin TaEXPB1 mRNA, complete cds Length = 1034 Score = 69.9 bits (35), Expect = 3e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 127 gggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcg 186 ||||||||||||||||||| |||| || ||||||||| ||| |||||||||| |||| Sbjct: 267 gggccacctggtacggcgctcccaatggcgccggcccctacgacaacggtggtgcttgcg 326 Query: 187 ggttcaagaac 197 ||||||||||| Sbjct: 327 ggttcaagaac 337
>dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A09, full insert sequence Length = 1257 Score = 69.9 bits (35), Expect = 3e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 127 gggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcg 186 |||| |||||||| ||||| ||||| || |||||||| ||| |||| || || |||| Sbjct: 252 gggcaacctggtatggcgctcccaccggcgccggccctgacgacaacggcggcgcttgcg 311 Query: 187 ggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 312 ggttcaagaacgtgaaccagtacccattctcgtccatgacctcctgcggcaacga 366
>dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A02, full insert sequence Length = 1257 Score = 69.9 bits (35), Expect = 3e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 127 gggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcg 186 |||| |||||||| ||||| ||||| || |||||||| ||| |||| || || |||| Sbjct: 252 gggcaacctggtatggcgctcccaccggcgccggccctgacgacaacggcggcgcttgcg 311 Query: 187 ggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 312 ggttcaagaacgtgaaccagtacccattctcgtccatgacctcctgcggcaacga 366
>dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D06, full insert sequence Length = 1259 Score = 69.9 bits (35), Expect = 3e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 127 gggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcg 186 |||| |||||||| ||||| ||||| || |||||||| ||| |||| || || |||| Sbjct: 252 gggcaacctggtatggcgctcccaccggcgccggccctgacgacaacggcggcgcttgcg 311 Query: 187 ggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||| ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 312 ggttcaagaacgtgaaccagtacccattctcgtccatgacctcctgcggcaacga 366
>dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F13, full insert sequence Length = 1263 Score = 61.9 bits (31), Expect = 8e-07 Identities = 94/115 (81%) Strand = Plus / Plus Query: 127 gggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcg 186 |||| |||||||| ||||| ||||| || |||||||| ||| |||| || || |||| Sbjct: 258 gggcaacctggtatggcgctcccaccggcgccggccctgacgacaacggcggcgcttgcg 317 Query: 187 ggttcaagaacaccaaccagtaccccttctcctccatgacatcgtgcggcaacga 241 ||||||||||| |||||||| || ||||| |||||||| || ||||||||||| Sbjct: 318 ggttcaagaacgtgaaccagtaaccattctcgtccatgacctcctgcggcaacga 372
>ref|NM_187639.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 804 Score = 56.0 bits (28), Expect = 5e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||| || ||||||| |||||| ||||||| |||| |||| || || Sbjct: 130 gccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcc 189 Query: 183 tgcgggttcaag 194 ||||||| |||| Sbjct: 190 tgcgggtacaag 201
>ref|NM_187643.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 804 Score = 56.0 bits (28), Expect = 5e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||| || ||||||| |||||| ||||||| |||| |||| || || Sbjct: 130 gccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcc 189 Query: 183 tgcgggttcaag 194 ||||||| |||| Sbjct: 190 tgcgggtacaag 201
>ref|NM_187641.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 687 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggcc 162 |||||||||||||||||||| ||| ||| ||||||||||| Sbjct: 130 gccagggccacctggtacggtgcggccaagggtgccggcc 169
>gb|AF391106.1| Oryza sativa beta-expansin OsEXPB13 (EXPB13) gene, complete cds Length = 3501 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggcc 162 |||||||||||||||||||| ||| ||| ||||||||||| Sbjct: 2104 gccagggccacctggtacggtgcggccaagggtgccggcc 2143
>gb|AF261270.1| Oryza sativa beta-expansin (EXPB1) mRNA, complete cds Length = 1254 Score = 56.0 bits (28), Expect = 5e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||| || ||||||| |||||| ||||||| |||| |||| || || Sbjct: 151 gccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcc 210 Query: 183 tgcgggttcaag 194 ||||||| |||| Sbjct: 211 tgcgggtacaag 222
>gb|AY039023.1| Oryza sativa beta-expansin 1 (EXPB1a) gene, complete cds Length = 3381 Score = 56.0 bits (28), Expect = 5e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||| || ||||||| |||||| ||||||| |||| |||| || || Sbjct: 2240 gccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcc 2299 Query: 183 tgcgggttcaag 194 ||||||| |||| Sbjct: 2300 tgcgggtacaag 2311
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 56.0 bits (28), Expect = 5e-05 Identities = 61/72 (84%) Strand = Plus / Minus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||| || ||||||| |||||| ||||||| |||| |||| || || Sbjct: 380478 gccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcc 380419 Query: 183 tgcgggttcaag 194 ||||||| |||| Sbjct: 380418 tgcgggtacaag 380407 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggcc 162 |||||||||||||||||||| ||| ||| ||||||||||| Sbjct: 370047 gccagggccacctggtacggtgcggccaagggtgccggcc 370086 Score = 56.0 bits (28), Expect = 5e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||| || ||||||| |||||| ||||||| |||| |||| || || Sbjct: 365384 gccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcc 365443 Query: 183 tgcgggttcaag 194 ||||||| |||| Sbjct: 365444 tgcgggtacaag 365455
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 56.0 bits (28), Expect = 5e-05 Identities = 61/72 (84%) Strand = Plus / Minus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||| || ||||||| |||||| ||||||| |||| |||| || || Sbjct: 108006 gccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcc 107947 Query: 183 tgcgggttcaag 194 ||||||| |||| Sbjct: 107946 tgcgggtacaag 107935 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggcc 162 |||||||||||||||||||| ||| ||| ||||||||||| Sbjct: 97575 gccagggccacctggtacggtgcggccaagggtgccggcc 97614 Score = 56.0 bits (28), Expect = 5e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||| || ||||||| |||||| ||||||| |||| |||| || || Sbjct: 92912 gccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcc 92971 Query: 183 tgcgggttcaag 194 ||||||| |||| Sbjct: 92972 tgcgggtacaag 92983
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 56.0 bits (28), Expect = 5e-05 Identities = 61/72 (84%) Strand = Plus / Minus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||| || ||||||| |||||| ||||||| |||| |||| || || Sbjct: 380476 gccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcc 380417 Query: 183 tgcgggttcaag 194 ||||||| |||| Sbjct: 380416 tgcgggtacaag 380405 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggcc 162 |||||||||||||||||||| ||| ||| ||||||||||| Sbjct: 370045 gccagggccacctggtacggtgcggccaagggtgccggcc 370084 Score = 56.0 bits (28), Expect = 5e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||| || ||||||| |||||| ||||||| |||| |||| || || Sbjct: 365382 gccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcc 365441 Query: 183 tgcgggttcaag 194 ||||||| |||| Sbjct: 365442 tgcgggtacaag 365453
>dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K12, full insert sequence Length = 1883 Score = 56.0 bits (28), Expect = 5e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 180 gcgtgcgggttcaagaacaccaaccagtaccc 211 ||||||||||||||| |||||||||||||||| Sbjct: 99 gcgtgcgggttcaagcacaccaaccagtaccc 130
>dbj|AK072792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142P17, full insert sequence Length = 1164 Score = 56.0 bits (28), Expect = 5e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||| || ||||||| |||||| ||||||| |||| |||| || || Sbjct: 164 gccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcc 223 Query: 183 tgcgggttcaag 194 ||||||| |||| Sbjct: 224 tgcgggtacaag 235
>gb|AY533102.1| Triticum aestivum beta-expansin 2 (EXPB2) mRNA, complete cds Length = 1068 Score = 50.1 bits (25), Expect = 0.003 Identities = 61/73 (83%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgc 181 ||||| |||||||||||||||| |||||| || ||||||||| ||| |||| || || Sbjct: 149 cgccaaggccacctggtacggcaagcccaccggctccggccccaaagacaacggcggcgc 208 Query: 182 gtgcgggttcaag 194 ||||||| ||||| Sbjct: 209 gtgcgggatcaag 221
>gb|AY543540.1| Triticum aestivum expansin EXPB5 mRNA, complete cds Length = 960 Score = 50.1 bits (25), Expect = 0.003 Identities = 61/73 (83%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgc 181 ||||| |||||||||||||||| |||||| || ||||||||| ||| |||| || || Sbjct: 132 cgccaaggccacctggtacggcaagcccaccggctccggccccaaagacaacggcggcgc 191 Query: 182 gtgcgggttcaag 194 ||||||| ||||| Sbjct: 192 gtgcgggatcaag 204
>gb|AY533101.1| Triticum aestivum beta-expansin 1 (EXPB1) mRNA, complete cds Length = 1111 Score = 48.1 bits (24), Expect = 0.013 Identities = 60/72 (83%) Strand = Plus / Plus Query: 123 gccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcg 182 |||| |||||||||||||||| |||||| || ||||||||| ||| |||| || ||| Sbjct: 180 gccaaggccacctggtacggcaggcccaccggctccggccccaaagacaacggcggcgcg 239 Query: 183 tgcgggttcaag 194 |||||| ||||| Sbjct: 240 tgcgggatcaag 251
>gb|AY197352.1| Zea mays clone pJR11 beta-expansin 9 protein (EXPB9) mRNA, complete cds Length = 1088 Score = 48.1 bits (24), Expect = 0.013 Identities = 63/76 (82%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgc 181 ||||||||||||||||||||| ||||| ||||||||| | ||| |||| ||||| Sbjct: 140 cgccagggccacctggtacggtcagcccaacggtgccggcgctcctgacaacggcggtgc 199 Query: 182 gtgcgggttcaagaac 197 ||||||| |||||||| Sbjct: 200 gtgcgggatcaagaac 215
>emb|Z68893.1|HLHOLLIGN H.lanatus mRNA for Hol l I protein Length = 1086 Score = 48.1 bits (24), Expect = 0.013 Identities = 54/64 (84%) Strand = Plus / Plus Query: 131 cacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcgggtt 190 ||||||||||||| ||| ||||| || ||||||| |||| |||| || |||||||||| Sbjct: 95 cacctggtacggcaagccgacgggggcgggccccaaggacaacggcggcgcgtgcgggta 154 Query: 191 caag 194 |||| Sbjct: 155 caag 158
>emb|AJ131850.1|PPR131850 Poa pratensis mRNA for group I pollen allergen Length = 792 Score = 48.1 bits (24), Expect = 0.013 Identities = 54/64 (84%) Strand = Plus / Plus Query: 131 cacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcgggtt 190 ||||||||||||| ||| || || |||||||||| |||| |||| || |||||||||| Sbjct: 138 cacctggtacggcaagccgaccggcgccggccccaaggacaacggcggcgcgtgcgggta 197 Query: 191 caag 194 |||| Sbjct: 198 caag 201
>gb|U31771.1|OSU31771 Oryza sativa Ory s 1 mRNA, complete cds Length = 1168 Score = 48.1 bits (24), Expect = 0.013 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 128 ggccacctggtacggcgcgcccacgggtgccgg-ccccatggacgacggtggtgcgtgcg 186 |||||||||||| || ||||||| |||||| || ||||| |||| |||| || ||||||| Sbjct: 157 ggccacctggtatggtgcgcccaagggtgctggcccccaaggacaacggcggcgcgtgcg 216 Query: 187 ggttcaag 194 ||| |||| Sbjct: 217 ggtacaag 224
>gb|AY166659.1| Oryza sativa (indica cultivar-group) pollen allergen (OSIPA) gene, partial cds Length = 2411 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggc 143 |||||||||||||||||||||| Sbjct: 2023 cgccagggccacctggtacggc 2044
>gb|AF220610.1| Oryza sativa pollen allergen mRNA, complete cds Length = 1106 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggc 143 |||||||||||||||||||||| Sbjct: 171 cgccagggccacctggtacggc 192
>ref|NM_197637.1| Oryza sativa (japonica cultivar-group) beta-expansin (OSJNBa0082M15.4), mRNA Length = 1148 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggc 143 |||||||||||||||||||||| Sbjct: 186 cgccagggccacctggtacggc 207
>ref|XM_329485.1| Neurospora crassa OR74A hypothetical protein (NCU08440.1) partial mRNA Length = 681 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 ttccgccttcaccgccgacccc 110 |||||||||||||||||||||| Sbjct: 63 ttccgccttcaccgccgacccc 84
>ref|XM_958317.1| Neurospora crassa OR74A hypothetical protein (NCU08440.1) partial mRNA Length = 681 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 ttccgccttcaccgccgacccc 110 |||||||||||||||||||||| Sbjct: 63 ttccgccttcaccgccgacccc 84
>gb|AF261277.1| Oryza sativa beta-expansin (EXPB9) mRNA, complete cds Length = 1117 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggc 143 |||||||||||||||||||||| Sbjct: 186 cgccagggccacctggtacggc 207
>emb|BX284762.1|NCB13B3 Neurospora crassa DNA linkage group II BAC contig B13B3 Length = 82584 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 ttccgccttcaccgccgacccc 110 |||||||||||||||||||||| Sbjct: 26768 ttccgccttcaccgccgacccc 26789
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cgccagggccacctggtacggc 143 |||||||||||||||||||||| Sbjct: 118358 cgccagggccacctggtacggc 118337
>dbj|AK099112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033P05, full insert sequence Length = 1071 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggc 143 |||||||||||||||||||||| Sbjct: 202 cgccagggccacctggtacggc 223
>dbj|AK070187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043G12, full insert sequence Length = 1121 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggc 143 |||||||||||||||||||||| Sbjct: 202 cgccagggccacctggtacggc 223
>gb|AF527754.1| Takifugu rubripes hypothetical protein gene, partial cds; and twist neighbor (Twistnb), nephew of atonal 3 (Nato3), twist, sorting nexin 13 (Snx13), biotinidase precursor (Btd), and hypothetical protein genes, complete cds Length = 59563 Score = 42.1 bits (21), Expect = 0.78 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 gtcctccctcctcgtcaccta 58 ||||||||||||||||||||| Sbjct: 1390 gtcctccctcctcgtcaccta 1370
>gb|AY533104.1| Triticum aestivum beta-expansin 2 (EXPB2) gene, complete cds Length = 1216 Score = 40.1 bits (20), Expect = 3.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 122 cgccagggccacctggtacggcgcgcccacgggtgccggcccca 165 ||||| |||||||||||||||| |||||| || ||||||||| Sbjct: 149 cgccaaggccacctggtacggcaagcccaccggctccggcccca 192
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 cacgggtgccggccccatggacga 172 ||||||| |||||||||||||||| Sbjct: 4330628 cacgggtaccggccccatggacga 4330651
>gb|AY197353.1| Zea mays clone pJR9 beta-expansin 1 protein (EXPB1) mRNA, complete cds Length = 1066 Score = 40.1 bits (20), Expect = 3.1 Identities = 59/72 (81%) Strand = Plus / Plus Query: 126 agggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgc 185 ||||||||||||||||| ||||| ||||||||| | ||| |||| ||||||||| Sbjct: 170 agggccacctggtacggtcagcccaacggtgccggcgctcctgacaacggcggtgcgtgc 229 Query: 186 gggttcaagaac 197 ||| |||||||| Sbjct: 230 gggatcaagaac 241
>emb|Z27090.1|PPRPHLP1X P.pratense mRNA for pollen allergen PhlpI Length = 1152 Score = 40.1 bits (20), Expect = 3.1 Identities = 53/64 (82%) Strand = Plus / Plus Query: 131 cacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcgggtt 190 ||||||||||||| ||| |||| ||||| |||| |||| |||| || |||||||||| Sbjct: 146 cacctggtacggcaagccgacggccgccggtcccaaggacaacggcggcgcgtgcgggta 205 Query: 191 caag 194 |||| Sbjct: 206 caag 209
>gb|S80654.1| major allergen Pha a 1 [Phalaris aquatica=canary grass, pollen, mRNA Partial, 1088 nt] Length = 1088 Score = 40.1 bits (20), Expect = 3.1 Identities = 53/64 (82%) Strand = Plus / Plus Query: 131 cacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgcgggtt 190 ||||||||||||| ||| ||||| || || |||| |||| |||| || |||||||||| Sbjct: 177 cacctggtacggcaagccgacgggcgcggggcccaaggacaacggcggcgcgtgcgggta 236 Query: 191 caag 194 |||| Sbjct: 237 caag 240
>gb|AF332174.1|AF332174 Zea mays beta-expansin 1 (expB1) mRNA, complete cds Length = 1080 Score = 40.1 bits (20), Expect = 3.1 Identities = 59/72 (81%) Strand = Plus / Plus Query: 126 agggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgc 185 ||||||||||||||||| ||||| ||||||||| | ||| |||| ||||||||| Sbjct: 170 agggccacctggtacggtcagcccaacggtgccggcgctcctgacaacggcggtgcgtgc 229 Query: 186 gggttcaagaac 197 ||| |||||||| Sbjct: 230 gggatcaagaac 241
>gb|AY103636.1| Zea mays PCO124530 mRNA sequence Length = 1085 Score = 40.1 bits (20), Expect = 3.1 Identities = 59/72 (81%) Strand = Plus / Plus Query: 126 agggccacctggtacggcgcgcccacgggtgccggccccatggacgacggtggtgcgtgc 185 ||||||||||||||||| ||||| ||||||||| | ||| |||| ||||||||| Sbjct: 182 agggccacctggtacggtcagcccaacggtgccggcgctcctgacaacggcggtgcgtgc 241 Query: 186 gggttcaagaac 197 ||| |||||||| Sbjct: 242 gggatcaagaac 253 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,650,277 Number of Sequences: 3902068 Number of extensions: 1650277 Number of successful extensions: 36279 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 36019 Number of HSP's gapped (non-prelim): 242 length of query: 241 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 219 effective length of database: 17,147,199,772 effective search space: 3755236750068 effective search space used: 3755236750068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
