>K1C15_SHEEP (O77727) Keratin, type I cytoskeletal 15 (Cytokeratin-15) (CK-15)|
           (Keratin-15) (K15)
          Length = 453

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +3

Query: 21  AGDEAAVAERL-EALWRKLGKKQHFEEAVADLTATLRDRYDGASPALRESMYSTVCRVAT 197
           +G+E    + L + L   L K +  EEA ADL   +RD Y   SP   E  YS   +   
Sbjct: 100 SGNEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWYQRQSPTSPERDYSPYFKTTD 159

Query: 198 VLQTRYTASGFWRAGLNLFVATEKLLTNPAEKERLK 305
            L+ +  A+    + + L +   +L    A+  RLK
Sbjct: 160 ELRDKILAAAIDNSRVILEIDNARL---AADDFRLK 192

>SC5A3_HUMAN (P53794) Sodium/myo-inositol cotransporter (Na(+)/myo-inositol|
           cotransporter)
          Length = 718

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 213 YTASG-FWRAGLNLFVATEKLLTNPAEKERLKTCILRAREHLDEKEN 350
           Y A+G FW  GL   + +  LLT P  KE+++T    ++++L  KEN
Sbjct: 513 YVATGLFWVTGLITVIVS--LLTPPPTKEQIRTTTFWSKKNLVVKEN 557

>TNPX_ECOLI (Q00042) Putative transposon gamma-delta 80.3 kDa protein|
           (Transposon Tn1000 protein tnpX)
          Length = 698

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
 Frame = +3

Query: 171 YSTVCRVATVLQTRYTASGFWRAGLNLFVATEKLLT------NPAEKERLKTCILRAREH 332
           Y+ +  +A+ + + Y  S          +++E LL       N A+ + L+ C L A+E+
Sbjct: 110 YAMLMEIASYISSHYKLSSQ--------ISSETLLNEHLKKWNSAQGDILRKCRLVAKEY 161

Query: 333 LDEKENEESM 362
           LDE   EES+
Sbjct: 162 LDENNPEESI 171

>AMPA_NEIMA (Q9JTI8) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 468

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 272 QLLCCYEEVQTSAPESRCCISSLKDGCNTANRRV 171
           QL  C EE Q + P +   +SSL++G N A+ ++
Sbjct: 18  QLFVCTEEAQLNHPTALALLSSLEEGQNFADTKI 51

>CSN11_KLULA (Q6CU48) COP9 signalosome complex subunit 11|
          Length = 389

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +3

Query: 123 LRDRYDGASPALRESMYSTVCRVATVLQTRYTASGFWRAGLNLFVATEKL 272
           L  ++D  S  +R+ MY+   R+AT +Q  Y +    R G++  + T+++
Sbjct: 239 LEKKWDIISKTMRQKMYAFYLRIATKIQISYLSE---RVGISREIVTQEI 285

>CWC22_CANAL (Q59XY0) Pre-mRNA-splicing factor CWC22|
          Length = 648

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +3

Query: 234 RAGLNLFVATEKLLTNPAEKERLKTCILRAREHLDEKENE 353
           R  LN+F   E+ L +  E   LK  IL   +H DE ENE
Sbjct: 265 RDHLNVFSVDEEYLDHENEYIELKKEILGETDHEDENENE 304

>K1C15_HUMAN (P19012) Keratin, type I cytoskeletal 15 (Cytokeratin-15) (CK-15)|
           (Keratin-15) (K15)
          Length = 456

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 21  AGDEAAVAERL-EALWRKLGKKQHFEEAVADLTATLRDRYDGASPALRESMYSTVCRVAT 197
           +G+E    + L + L   L K +  EEA ADL   + D Y   +PA  E  YS   +   
Sbjct: 102 SGNEKITMQNLNDRLASYLDKVRALEEANADLEVKIHDWYQKQTPASPECDYSQYFKTIE 161

Query: 198 VLQTRYTAS 224
            L+ +  A+
Sbjct: 162 ELRDKIMAT 170

>MT2_CAEEL (P17512) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)|
           (Metallothionein-like protein) (MT-Ce)
          Length = 62

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 263 CCYEEVQTSAPESRCCISSLKDGCNTAN 180
           CC +    +A E +CC S    GC  AN
Sbjct: 27  CCEQYCCPTASEKKCCKSGCAGGCKCAN 54

>CEP2_HUMAN (Q9BV73) Centrosomal protein 2 (Centrosomal Nek2-associated protein|
           1) (C-NAP1) (Centrosome protein 250)
           (Centrosome-associated protein CEP250)
          Length = 2442

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = +3

Query: 6   AMSATAGDEAAVAERLEALWRK----LGKKQHFEEAVADLTATLRD 131
           A +A   D A   +R EALW K      + Q  EEA A+L A LRD
Sbjct: 639 ARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRD 684

>SYT_MYCPA (Q73WE4) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 684

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
 Frame = +3

Query: 48  RLEALWRKLGKKQHFEEAVADLTATLRDRYDGASPALRESMYSTVCRVATVLQTRY---- 215
           +LE +  K G     E    +LTA     YD  +P  RE ++  +CR   +  TR+    
Sbjct: 160 KLELVDDKSGDPDIMEVGGDELTA-----YDNLNPRTRERVWGDLCRGPHIPTTRHIPAF 214

Query: 216 ----TASGFWRAGLN 248
               +++ +WR   N
Sbjct: 215 KLTRSSAAYWRGDQN 229

>MUTS_THETN (Q8RA71) DNA mismatch repair protein mutS|
          Length = 869

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
 Frame = +3

Query: 9   MSATAGDEAAVAER----LEALWRKLGKKQHFEEAVADLTATLRDRYDGASPALRESM 170
           +S  AG   ++ ER    LEAL R    K   EEAV+    T  D +  A  AL E +
Sbjct: 780 VSKLAGLPYSIIERAKEILEALERDKAVKNELEEAVSQFAFTQIDIFSSAKDALIEEI 837

>TRPB_PICTO (Q6L271) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 419

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/72 (29%), Positives = 30/72 (41%)
 Frame = +3

Query: 132 RYDGASPALRESMYSTVCRVATVLQTRYTASGFWRAGLNLFVATEKLLTNPAEKERLKTC 311
           RY GA+P+L     S +     +     T      A +  F  T+  +  P     + T 
Sbjct: 335 RYHGAAPSL-----SLLINHGRIKSDEVTEEQVKNA-IKTFANTQGFIIAPESGHAVATA 388

Query: 312 ILRAREHLDEKE 347
           I  AREH DEK+
Sbjct: 389 IKYAREHKDEKK 400

>VG55_BPN15 (O64363) Protein gp55 precursor|
          Length = 181

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = +3

Query: 33  AAVAERLEALWRKLGKKQHFEEAVADLTATLRDRYDGASPALRESMYSTVCRVATVLQTR 212
           A    +L+   RKL  +    +  ADL A +R +  GA+ A+   M  ++   A     R
Sbjct: 93  AGTVSQLQQQARKLATRLDAAKHTADLAAAVRGKTAGANAAVLADMLGSLAAEAKYYAER 152

Query: 213 YTASGFWRAGL 245
              S  +RAG+
Sbjct: 153 SDES--YRAGM 161

>PORB_PYRFU (Q51805) Pyruvate synthase subunit porB (EC 1.2.7.1) (Pyruvate|
           oxidoreductase beta chain) (POR) (Pyruvic-ferredoxin
           oxidoreductase beta subunit)
          Length = 330

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +3

Query: 33  AAVAERLEALWRKLGKK 83
           AAVA  +EA W+KLG+K
Sbjct: 84  AAVASGIEAAWKKLGRK 100

>SCNNB_HUMAN (P51168) Amiloride-sensitive sodium channel beta-subunit|
           (Epithelial Na+ channel beta subunit) (Beta ENaC)
           (Nonvoltage-gated sodium channel 1 beta subunit) (SCNEB)
           (Beta NaCH) (ENaCB)
          Length = 640

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 260 CYEEVQTSAPESRCCISSLKDGCN 189
           CY ++Q S  +   CI   K+ CN
Sbjct: 426 CYSDLQMSVAQRETCIGMCKESCN 449


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,172,498
Number of Sequences: 219361
Number of extensions: 578355
Number of successful extensions: 1962
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1962
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)