ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart53c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103447.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 9e-82
2dbj|AK062015.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 9e-82
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 212 6e-52
4dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic D... 212 6e-52
5gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 50 0.005
6ref|XM_480929.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.022
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
8dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
9emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on ch... 48 0.022
10ref|XM_468708.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.085
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.085
12gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 46 0.085
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.085
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.085
15gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genom... 46 0.085
16dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.085
17ref|XM_471455.1| Oryza sativa (japonica cultivar-group), predic... 44 0.34
18emb|CR555306.1| Azoarcus sp. EbN1 complete genome 44 0.34
19emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4,... 44 0.34
20dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
21dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 44 0.34
22ref|XM_475520.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
23ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.3
24ref|XM_464458.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
25ref|XM_479002.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
26ref|XM_475078.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
27gb|AY020219.1| Oryza sativa microsatellite MRG2544 containing (G... 42 1.3
28gb|AY019893.1| Oryza sativa microsatellite MRG2218 containing (C... 42 1.3
29emb|AJ557073.1|OSA557073 Oryza sativa (japonica cultivar-group) ... 42 1.3
30gb|AY217766.1| Sorghum bicolor caffeic acid O-methyltransferase ... 42 1.3
31dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
32gb|DQ298248.1| Chlamydomonas reinhardtii radial spike protein 8 ... 42 1.3
33gb|AF387790.1|AF387790 Sorghum bicolor O-methyltransferase mRNA,... 42 1.3
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
35dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
37gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Canc... 42 1.3
38dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.3
39gb|AF546141.1| Streptomyces ghanaensis UnbL (unbL), UnbV (unbV),... 42 1.3
40gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.3
41dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
42dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.3
43dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
44dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
45dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
46dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
47gb|AE005012.1| Halobacterium sp. NRC-1 section 43 of 170 of the ... 42 1.3
48dbj|AK122094.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
49dbj|AK106443.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
50dbj|AK101972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
51dbj|AK067238.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
52emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.3
53dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
54dbj|AK063920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
55gb|AY108279.1| Zea mays PCO119814 mRNA sequence 42 1.3
56emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete ... 42 1.3
57gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
58gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
59gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome 40 5.3
60gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 5.3
61ref|XM_465817.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
62ref|XM_506807.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.3
63ref|NM_003107.2| Homo sapiens SRY (sex determining region Y)-box... 40 5.3
64ref|XM_471458.1| Oryza sativa (japonica cultivar-group), predic... 40 5.3
65gb|BC072668.1| Homo sapiens SRY (sex determining region Y)-box 4... 40 5.3
66gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 5.3
67gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.3
68emb|AL136179.15| Human DNA sequence from clone RP3-322L4 on chro... 40 5.3
69gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome 40 5.3
70emb|X70683.1|HSSOX4M H.sapiens mRNA for SOX-4 protein 40 5.3
71gb|AY956334.1| Streptomyces aureofaciens strain CCM3239 auricin ... 40 5.3
72gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, ... 40 5.3
73emb|BX538261.1|HSM806504 Homo sapiens genomic DNA; cDNA DKFZp686... 40 5.3
74gb|AF474179.1| Rhesus cytomegalovirus US3 protein (US3), US2 pro... 40 5.3
75gb|AC093538.2| Homo sapiens chromosome 5 clone RP11-99I23, compl... 40 5.3
76gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.3
77dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
78dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
79dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.3
80dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.3
81gb|AC010349.7|AC010349 Homo sapiens chromosome 5 clone CTD-2020O... 40 5.3
82dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
83dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
84dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
85dbj|AK102664.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
86gb|AF175223.1|AF175223 Drosophila melanogaster SANT domain prote... 40 5.3
87dbj|AK069572.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
88dbj|AK067409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
89gb|AC100967.15| Mus musculus chromosome 5, clone RP23-74L20, com... 40 5.3
90gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.3
91gb|AY609873.1| Sus scrofa clone Clu_37058.scr.msk.p1.Contig2, mR... 40 5.3
92gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.3
93gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge... 40 5.3 
>dbj|AK103447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129G15, full
           insert sequence
          Length = 1349

 Score =  311 bits (157), Expect = 9e-82
 Identities = 295/341 (86%)
 Strand = Plus / Plus

                                                                       
Query: 33  gcggcggtggcggagcgcctggaggcgctgtggaggaagctgggcaagaagcagcacttc 92
           |||||||||| | |||| ||| |||||||| ||  ||||||||| | |||||||||||||
Sbjct: 244 gcggcggtggagcagcggctgcaggcgctgcggcagaagctggggaggaagcagcacttc 303

                                                                       
Query: 93  gaggaggccgtcgccgacctcaccgccacgctccgcgaccgctacgacggcgcctctccc 152
           ||||||||||||||||||||| ||||| || |||| |||| | ||| || |||||| |||
Sbjct: 304 gaggaggccgtcgccgacctcgccgccgcggtccgggaccaccacgccgccgcctccccc 363

                                                                       
Query: 153 gccctccgcgagtcgatgtactctacggtttgccgtgttgcaaccgtccttcagactaga 212
           |||||||||||   |||||| ||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 364 gccctccgcgatctgatgtattctacagtttgccgtgtggcaactgtccttcagactaga 423

                                                                       
Query: 213 tatacagcatctggattctggcgcgctggtctgaacctcttcgtagcaacagagaagttg 272
           ||||||||| ||||||||||||| |||||||||||||||||| |||  ||||||||| ||
Sbjct: 424 tatacagcacctggattctggcgtgctggtctgaacctcttcttaggtacagagaagctg 483

                                                                       
Query: 273 ttaactaatcctgctgaaaaggaacgcctcaagacttgcattttgagggcccgggagcat 332
            ||||||||||| | |||||||| |  || ||||||| |||| |||||||||||||||||
Sbjct: 484 gtaactaatccttcagaaaaggagcaactgaagactttcattctgagggcccgggagcat 543

                                                    
Query: 333 cttgatgaaaaagaaaatgaggagtcaatgccaaccaacag 373
           |||||||| ||||| || ||||| || ||||||| ||||||
Sbjct: 544 cttgatgagaaagagaacgaggaatccatgccaaacaacag 584
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>dbj|AK062015.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F05, full
           insert sequence
          Length = 1232

 Score =  311 bits (157), Expect = 9e-82
 Identities = 295/341 (86%)
 Strand = Plus / Plus

                                                                       
Query: 33  gcggcggtggcggagcgcctggaggcgctgtggaggaagctgggcaagaagcagcacttc 92
           |||||||||| | |||| ||| |||||||| ||  ||||||||| | |||||||||||||
Sbjct: 109 gcggcggtggagcagcggctgcaggcgctgcggcagaagctggggaggaagcagcacttc 168

                                                                       
Query: 93  gaggaggccgtcgccgacctcaccgccacgctccgcgaccgctacgacggcgcctctccc 152
           ||||||||||||||||||||| ||||| || |||| |||| | ||| || |||||| |||
Sbjct: 169 gaggaggccgtcgccgacctcgccgccgcggtccgggaccaccacgccgccgcctccccc 228

                                                                       
Query: 153 gccctccgcgagtcgatgtactctacggtttgccgtgttgcaaccgtccttcagactaga 212
           |||||||||||   |||||| ||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 229 gccctccgcgatctgatgtattctacagtttgccgtgtggcaactgtccttcagactaga 288

                                                                       
Query: 213 tatacagcatctggattctggcgcgctggtctgaacctcttcgtagcaacagagaagttg 272
           ||||||||| ||||||||||||| |||||||||||||||||| |||  ||||||||| ||
Sbjct: 289 tatacagcacctggattctggcgtgctggtctgaacctcttcttaggtacagagaagctg 348

                                                                       
Query: 273 ttaactaatcctgctgaaaaggaacgcctcaagacttgcattttgagggcccgggagcat 332
            ||||||||||| | |||||||| |  || ||||||| |||| |||||||||||||||||
Sbjct: 349 gtaactaatccttcagaaaaggagcaactgaagactttcattctgagggcccgggagcat 408

                                                    
Query: 333 cttgatgaaaaagaaaatgaggagtcaatgccaaccaacag 373
           |||||||| ||||| || ||||| || ||||||| ||||||
Sbjct: 409 cttgatgagaaagagaacgaggaatccatgccaaacaacag 449
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  212 bits (107), Expect = 6e-52
 Identities = 182/207 (87%)
 Strand = Plus / Minus

                                                                            
Query: 167      gatgtactctacggtttgccgtgttgcaaccgtccttcagactagatatacagcatctgg 226
                |||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 15891832 gatgtattctacagtttgccgtgtggcaactgtccttcagactagatatacagcacctgg 15891773

                                                                            
Query: 227      attctggcgcgctggtctgaacctcttcgtagcaacagagaagttgttaactaatcctgc 286
                ||||||||| |||||||||||||||||| |||  ||||||||| || ||||||||||| |
Sbjct: 15891772 attctggcgtgctggtctgaacctcttcttaggtacagagaagctggtaactaatccttc 15891713

                                                                            
Query: 287      tgaaaaggaacgcctcaagacttgcattttgagggcccgggagcatcttgatgaaaaaga 346
                 |||||||| |  || ||||||| |||| ||||||||||||||||||||||||| |||||
Sbjct: 15891712 agaaaaggagcaactgaagactttcattctgagggcccgggagcatcttgatgagaaaga 15891653

                                           
Query: 347      aaatgaggagtcaatgccaaccaacag 373
                 || ||||| || ||||||| ||||||
Sbjct: 15891652 gaacgaggaatccatgccaaacaacag 15891626



 Score =  117 bits (59), Expect = 3e-23
 Identities = 113/131 (86%)
 Strand = Plus / Minus

                                                                            
Query: 33       gcggcggtggcggagcgcctggaggcgctgtggaggaagctgggcaagaagcagcacttc 92
                |||||||||| | |||| ||| |||||||| ||  ||||||||| | |||||||||||||
Sbjct: 15893024 gcggcggtggagcagcggctgcaggcgctgcggcagaagctggggaggaagcagcacttc 15892965

                                                                            
Query: 93       gaggaggccgtcgccgacctcaccgccacgctccgcgaccgctacgacggcgcctctccc 152
                ||||||||||||||||||||| ||||| || |||| |||| | ||| || |||||| |||
Sbjct: 15892964 gaggaggccgtcgccgacctcgccgccgcggtccgggaccaccacgccgccgcctccccc 15892905

                           
Query: 153      gccctccgcga 163
                |||||||||||
Sbjct: 15892904 gccctccgcga 15892894
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>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1081_G10
          Length = 107955

 Score =  212 bits (107), Expect = 6e-52
 Identities = 182/207 (87%)
 Strand = Plus / Minus

                                                                         
Query: 167   gatgtactctacggtttgccgtgttgcaaccgtccttcagactagatatacagcatctgg 226
             |||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 54958 gatgtattctacagtttgccgtgtggcaactgtccttcagactagatatacagcacctgg 54899

                                                                         
Query: 227   attctggcgcgctggtctgaacctcttcgtagcaacagagaagttgttaactaatcctgc 286
             ||||||||| |||||||||||||||||| |||  ||||||||| || ||||||||||| |
Sbjct: 54898 attctggcgtgctggtctgaacctcttcttaggtacagagaagctggtaactaatccttc 54839

                                                                         
Query: 287   tgaaaaggaacgcctcaagacttgcattttgagggcccgggagcatcttgatgaaaaaga 346
              |||||||| |  || ||||||| |||| ||||||||||||||||||||||||| |||||
Sbjct: 54838 agaaaaggagcaactgaagactttcattctgagggcccgggagcatcttgatgagaaaga 54779

                                        
Query: 347   aaatgaggagtcaatgccaaccaacag 373
              || ||||| || ||||||| ||||||
Sbjct: 54778 gaacgaggaatccatgccaaacaacag 54752



 Score =  117 bits (59), Expect = 3e-23
 Identities = 113/131 (86%)
 Strand = Plus / Minus

                                                                         
Query: 33    gcggcggtggcggagcgcctggaggcgctgtggaggaagctgggcaagaagcagcacttc 92
             |||||||||| | |||| ||| |||||||| ||  ||||||||| | |||||||||||||
Sbjct: 56150 gcggcggtggagcagcggctgcaggcgctgcggcagaagctggggaggaagcagcacttc 56091

                                                                         
Query: 93    gaggaggccgtcgccgacctcaccgccacgctccgcgaccgctacgacggcgcctctccc 152
             ||||||||||||||||||||| ||||| || |||| |||| | ||| || |||||| |||
Sbjct: 56090 gaggaggccgtcgccgacctcgccgccgcggtccgggaccaccacgccgccgcctccccc 56031

                        
Query: 153   gccctccgcga 163
             |||||||||||
Sbjct: 56030 gccctccgcga 56020
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 83      gcagcacttcgaggaggccgtcgccgacc 111
               ||||||||||||||||||| |||||||||
Sbjct: 2804681 gcagcacttcgaggaggccatcgccgacc 2804709
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>ref|XM_480929.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 501

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 18 acggcgggggacgaggcggcggtggcgg 45
          |||||||| |||||||||||||||||||
Sbjct: 69 acggcgggcgacgaggcggcggtggcgg 96
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 18      acggcgggggacgaggcggcggtggcgg 45
               |||||||| |||||||||||||||||||
Sbjct: 8681066 acggcgggcgacgaggcggcggtggcgg 8681093
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>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0070J06
          Length = 142303

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 18    acggcgggggacgaggcggcggtggcgg 45
             |||||||| |||||||||||||||||||
Sbjct: 24045 acggcgggcgacgaggcggcggtggcgg 24072
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>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete
             sequence
          Length = 227816

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 24    ggggacgaggcggcggtggcggagcgcc 51
             |||||||||||||||||||| |||||||
Sbjct: 63524 ggggacgaggcggcggtggccgagcgcc 63497
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>ref|XM_468708.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 669

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 19  cggcgggggacgaggcggcggtggcgg 45
           ||||||| |||||||||||||||||||
Sbjct: 628 cggcgggcgacgaggcggcggtggcgg 602
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 19       cggcgggggacgaggcggcggtggcgg 45
                ||||||| |||||||||||||||||||
Sbjct: 21978645 cggcgggcgacgaggcggcggtggcgg 21978671



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 19       cggcgggggacgaggcggcggtggcgg 45
                ||||||| |||||||||||||||||||
Sbjct: 17148143 cggcgggcgacgaggcggcggtggcgg 17148169
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
             sequence
          Length = 153247

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 19    cggcgggggacgaggcggcggtggcgg 45
             ||||||| |||||||||||||||||||
Sbjct: 39536 cggcgggcgacgaggcggcggtggcgg 39562
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 19       cggcgggggacgaggcggcggtggcgg 45
                ||||||| |||||||||||||||||||
Sbjct: 21971674 cggcgggcgacgaggcggcggtggcgg 21971700



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 19       cggcgggggacgaggcggcggtggcgg 45
                ||||||| |||||||||||||||||||
Sbjct: 17141712 cggcgggcgacgaggcggcggtggcgg 17141738
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 19      cggcgggggacgaggcggcggtg 41
               |||||||||||||||||||||||
Sbjct: 9470431 cggcgggggacgaggcggcggtg 9470453



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 19      cggcgggggacgaggcggcggtggcggag 47
               |||||| || |||||||||||||||||||
Sbjct: 5347360 cggcggaggccgaggcggcggtggcggag 5347388



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 109      acctcaccgccacgctccgcgacc 132
                ||||||||||||||||||| ||||
Sbjct: 17662231 acctcaccgccacgctccgtgacc 17662208



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 18      acggcgggggacgaggcggcggtggcgg 45
               |||||||||||||||| ||||| |||||
Sbjct: 9471587 acggcgggggacgaggaggcggcggcgg 9471560
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>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete
             sequence
          Length = 127210

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 19    cggcgggggacgaggcggcggtggcgg 45
             ||||||| |||||||||||||||||||
Sbjct: 30371 cggcgggcgacgaggcggcggtggcgg 30345
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>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0006C08
          Length = 151987

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 19    cggcgggggacgaggcggcggtg 41
             |||||||||||||||||||||||
Sbjct: 83992 cggcgggggacgaggcggcggtg 84014



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 18    acggcgggggacgaggcggcggtggcgg 45
             |||||||||||||||| ||||| |||||
Sbjct: 85148 acggcgggggacgaggaggcggcggcgg 85121
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>ref|XM_471455.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3303

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 20  ggcgggggacgaggcggcggtg 41
           ||||||||||||||||||||||
Sbjct: 156 ggcgggggacgaggcggcggtg 177
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 98     ggccgtcgccgacctcaccgcc 119
              ||||||||||||||||||||||
Sbjct: 783435 ggccgtcgccgacctcaccgcc 783414
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>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08,
              complete sequence
          Length = 142814

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 20     ggcgggggacgaggcggcggtg 41
              ||||||||||||||||||||||
Sbjct: 125845 ggcgggggacgaggcggcggtg 125866



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 18     acggcgggggacgaggcggcggtggcgg 45
              |||||||||||||||| ||||| |||||
Sbjct: 138483 acggcgggggacgaggaggcggcggcgg 138456
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 20       ggcgggggacgaggcggcggtg 41
                ||||||||||||||||||||||
Sbjct: 11117190 ggcgggggacgaggcggcggtg 11117211



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 18       acggcgggggacgaggcggcggtggcgg 45
                |||||||||||||||| ||||| |||||
Sbjct: 11129828 acggcgggggacgaggaggcggcggcgg 11129801
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 34      cggcggtggcggagcgcctgga 55
               ||||||||||||||||||||||
Sbjct: 3149529 cggcggtggcggagcgcctgga 3149550
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>ref|XM_475520.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1812

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 28   acgaggcggcggtggcggagc 48
            |||||||||||||||||||||
Sbjct: 1382 acgaggcggcggtggcggagc 1402
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>ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1225_F07.15
           mRNA
          Length = 1000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 19  cggcgggggacgaggcggcggtggcggag 47
           |||||| || |||||||||||||||||||
Sbjct: 128 cggcggaggccgaggcggcggtggcggag 100
to top
>ref|XM_464458.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 991

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 19  cggcgggggacgaggcggcggtggcggag 47
           |||||| || |||||||||||||||||||
Sbjct: 117 cggcggaggccgaggcggcggtggcggag 89
to top
>ref|XM_479002.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2944

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 25  gggacgaggcggcggtggcgg 45
           |||||||||||||||||||||
Sbjct: 463 gggacgaggcggcggtggcgg 483
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>ref|XM_475078.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2535

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 26   ggacgaggcggcggtggcgga 46
            |||||||||||||||||||||
Sbjct: 2157 ggacgaggcggcggtggcgga 2177
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>gb|AY020219.1| Oryza sativa microsatellite MRG2544 containing (GA)X12, closest to
           marker R2344, genomic sequence
          Length = 224

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 19  cggcgggggacgaggcggcggtggcggag 47
           |||||| || |||||||||||||||||||
Sbjct: 204 cggcggaggccgaggcggcggtggcggag 176
to top
>gb|AY019893.1| Oryza sativa microsatellite MRG2218 containing (CT)X12, closest
          to marker R2344, genomic sequence
          Length = 224

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 19 cggcgggggacgaggcggcggtggcggag 47
          |||||| || |||||||||||||||||||
Sbjct: 22 cggcggaggccgaggcggcggtggcggag 50
to top
>emb|AJ557073.1|OSA557073 Oryza sativa (japonica cultivar-group) partial mRNA for rid2
           protein
          Length = 846

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 28  acgaggcggcggtggcggagc 48
           |||||||||||||||||||||
Sbjct: 416 acgaggcggcggtggcggagc 436
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>gb|AY217766.1| Sorghum bicolor caffeic acid O-methyltransferase gene, complete cds
          Length = 3312

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 18  acggcgggggacgaggcggcggtggcgga 46
           ||||||| ||||| |||||||||||||||
Sbjct: 316 acggcggaggacgtggcggcggtggcgga 344
to top
>dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A06, full
           insert sequence
          Length = 991

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 19  cggcgggggacgaggcggcggtggcggag 47
           |||||| || |||||||||||||||||||
Sbjct: 117 cggcggaggccgaggcggcggtggcggag 89
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>gb|DQ298248.1| Chlamydomonas reinhardtii radial spike protein 8 (RSP8) gene,
            complete cds
          Length = 2413

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 32   ggcggcggtggcggagcgcctggaggcgc 60
            |||||||| |||||||| |||||||||||
Sbjct: 1184 ggcggcggcggcggagcacctggaggcgc 1212
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>gb|AF387790.1|AF387790 Sorghum bicolor O-methyltransferase mRNA, complete cds
          Length = 1458

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 18  acggcgggggacgaggcggcggtggcgga 46
           ||||||| ||||| |||||||||||||||
Sbjct: 119 acggcggaggacgtggcggcggtggcgga 147
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 25       gggacgaggcggcggtggcgg 45
                |||||||||||||||||||||
Sbjct: 24244557 gggacgaggcggcggtggcgg 24244537
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 19       cggcgggggacgaggcggcgg 39
                |||||||||||||||||||||
Sbjct: 26391149 cggcgggggacgaggcggcgg 26391129



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 26      ggacgaggcggcggtggcgg 45
               ||||||||||||||||||||
Sbjct: 9819635 ggacgaggcggcggtggcgg 9819654
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 28      acgaggcggcggtggcggagc 48
               |||||||||||||||||||||
Sbjct: 1184165 acgaggcggcggtggcggagc 1184185



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     ggacgaggcggcggtggcgga 46
              |||||||||||||||||||||
Sbjct: 684038 ggacgaggcggcggtggcgga 684058
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>gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164595

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 20     ggcgggggacgaggcggcggt 40
              |||||||||||||||||||||
Sbjct: 143250 ggcgggggacgaggcggcggt 143270
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 99      gccgtcgccgacctcaccgcc 119
               |||||||||||||||||||||
Sbjct: 2007093 gccgtcgccgacctcaccgcc 2007073
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>gb|AF546141.1| Streptomyces ghanaensis UnbL (unbL), UnbV (unbV), UnbU (unbU), PksE
            (pksE), and TebC (tebC) genes, complete cds
          Length = 10371

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 102  gtcgccgacctcaccgccacgctcc 126
            |||||||||||| ||||||||||||
Sbjct: 5587 gtcgccgacctcgccgccacgctcc 5611
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 19     cggcgggggacgaggcggcggtggcggag 47
              |||||| || |||||||||||||||||||
Sbjct: 217916 cggcggcggtcgaggcggcggtggcggag 217944



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 22     cgggggacgaggcggcggtggcgg 45
              |||||| |||||||||||||||||
Sbjct: 483189 cgggggccgaggcggcggtggcgg 483166
to top
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OJ1524_D08
          Length = 143046

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 19  cggcgggggacgaggcggcggtggcggag 47
           |||||| || |||||||||||||||||||
Sbjct: 941 cggcggaggccgaggcggcggtggcggag 969
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 99      gccgtcgccgacctcaccgcc 119
               |||||||||||||||||||||
Sbjct: 4639287 gccgtcgccgacctcaccgcc 4639267
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>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0709F06
          Length = 170964

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 19   cggcgggggacgaggcggcgg 39
            |||||||||||||||||||||
Sbjct: 3188 cggcgggggacgaggcggcgg 3168
to top
>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0085J13
          Length = 130185

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    cggcgggggacgaggcggcgg 39
             |||||||||||||||||||||
Sbjct: 88876 cggcgggggacgaggcggcgg 88856
to top
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E05
          Length = 137364

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 25    gggacgaggcggcggtggcgg 45
             |||||||||||||||||||||
Sbjct: 56108 gggacgaggcggcggtggcgg 56088
to top
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1225_F07
          Length = 142772

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 19    cggcgggggacgaggcggcggtggcggag 47
             |||||| || |||||||||||||||||||
Sbjct: 73663 cggcggaggccgaggcggcggtggcggag 73691
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>gb|AE005012.1| Halobacterium sp. NRC-1 section 43 of 170 of the complete genome
          Length = 10293

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 40   tggcggagcgcctggaggcgctgtg 64
            ||||| |||||||||||||||||||
Sbjct: 8039 tggcgcagcgcctggaggcgctgtg 8015
to top
>dbj|AK122094.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125C04, full
           insert sequence
          Length = 3257

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 25  gggacgaggcggcggtggcgg 45
           |||||||||||||||||||||
Sbjct: 461 gggacgaggcggcggtggcgg 481
to top
>dbj|AK106443.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D12, full
            insert sequence
          Length = 2781

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 26   ggacgaggcggcggtggcgga 46
            |||||||||||||||||||||
Sbjct: 2270 ggacgaggcggcggtggcgga 2290
to top
>dbj|AK101972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076M10, full
            insert sequence
          Length = 2262

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 28   acgaggcggcggtggcggagc 48
            |||||||||||||||||||||
Sbjct: 1578 acgaggcggcggtggcggagc 1598
to top
>dbj|AK067238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G09, full
           insert sequence
          Length = 2945

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 25  gggacgaggcggcggtggcgg 45
           |||||||||||||||||||||
Sbjct: 463 gggacgaggcggcggtggcgg 483
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 98      ggccgtcgccgacctcaccgc 118
               |||||||||||||||||||||
Sbjct: 2669972 ggccgtcgccgacctcaccgc 2669952
to top
>dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106E09, full
           insert sequence
          Length = 1000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 19  cggcgggggacgaggcggcggtggcggag 47
           |||||| || |||||||||||||||||||
Sbjct: 128 cggcggaggccgaggcggcggtggcggag 100
to top
>dbj|AK063920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B09, full
            insert sequence
          Length = 2205

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 28   acgaggcggcggtggcggagc 48
            |||||||||||||||||||||
Sbjct: 1516 acgaggcggcggtggcggagc 1536
to top
>gb|AY108279.1| Zea mays PCO119814 mRNA sequence
          Length = 548

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 28 acgaggcggcggtggcggagc 48
          |||||||||||||||||||||
Sbjct: 23 acgaggcggcggtggcggagc 43
to top
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 26   ggacgaggcggcggtggcggagcgcctgg 54
            ||||| |||||||||||||||||| ||||
Sbjct: 6469 ggacgcggcggcggtggcggagcggctgg 6441
to top
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0041A22, complete sequence
          Length = 117919

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    ggacgaggcggcggtggcgga 46
             |||||||||||||||||||||
Sbjct: 29237 ggacgaggcggcggtggcgga 29257
to top
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02,
             complete sequence
          Length = 90509

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    acgaggcggcggtggcggagc 48
             |||||||||||||||||||||
Sbjct: 34451 acgaggcggcggtggcggagc 34471
to top
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 334     ttgatgaaaaagaaaatgag 353
               ||||||||||||||||||||
Sbjct: 1340093 ttgatgaaaaagaaaatgag 1340112
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 126    cgcgaccgctacgacggcgcctct 149
              ||||||||||||||||||| ||||
Sbjct: 375874 cgcgaccgctacgacggcggctct 375897
to top
>ref|XM_465817.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2022

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 109 acctcaccgccacgctccgcgacc 132
           ||||||||||||||||||| ||||
Sbjct: 334 acctcaccgccacgctccgtgacc 357
to top
>ref|XM_506807.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0021C10.5
           mRNA
          Length = 2047

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 109 acctcaccgccacgctccgcgacc 132
           ||||||||||||||||||| ||||
Sbjct: 357 acctcaccgccacgctccgtgacc 380
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>ref|NM_003107.2| Homo sapiens SRY (sex determining region Y)-box 4 (SOX4), mRNA
          Length = 4912

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   cggcgggggacgaggcggcg 38
            ||||||||||||||||||||
Sbjct: 1845 cggcgggggacgaggcggcg 1826
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>ref|XM_471458.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 993

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                      
Query: 18 acggcgggggacgaggcggcggtggcgg 45
          |||||||||||||||| ||||| |||||
Sbjct: 38 acggcgggggacgaggaggcggcggcgg 11
to top
>gb|BC072668.1| Homo sapiens SRY (sex determining region Y)-box 4, mRNA (cDNA clone
            MGC:71240 IMAGE:6584346), complete cds
          Length = 2107

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   cggcgggggacgaggcggcg 38
            ||||||||||||||||||||
Sbjct: 1665 cggcgggggacgaggcggcg 1646
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 39     gtggcggagcgcctggaggcgctg 62
              ||||||||||| ||||||||||||
Sbjct: 709232 gtggcggagcggctggaggcgctg 709255
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 127     gcgaccgctacgacggcgcc 146
               ||||||||||||||||||||
Sbjct: 1044133 gcgaccgctacgacggcgcc 1044114
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>emb|AL136179.15| Human DNA sequence from clone RP3-322L4 on chromosome 6 Contains the
             SOX4 gene for SRY (sex determining region Y)-box 4, a
             novel pseudogene and CpG islands, complete sequence
          Length = 128728

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    cggcgggggacgaggcggcg 38
             ||||||||||||||||||||
Sbjct: 11283 cggcgggggacgaggcggcg 11264
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>gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome
          Length = 221454

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    cgcctctcccgccctccgcg 162
              ||||||||||||||||||||
Sbjct: 181475 cgcctctcccgccctccgcg 181456
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>emb|X70683.1|HSSOX4M H.sapiens mRNA for SOX-4 protein
          Length = 2797

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   cggcgggggacgaggcggcg 38
            ||||||||||||||||||||
Sbjct: 1401 cggcgggggacgaggcggcg 1382
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>gb|AY956334.1| Streptomyces aureofaciens strain CCM3239 auricin biosynthesis gene
            cluster, partial sequence
          Length = 17455

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  ccgtcgccgacctcaccgcc 119
            ||||||||||||||||||||
Sbjct: 2439 ccgtcgccgacctcaccgcc 2458
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>gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, complete genome
          Length = 215678

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    cgcctctcccgccctccgcg 162
              ||||||||||||||||||||
Sbjct: 175693 cgcctctcccgccctccgcg 175674
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>emb|BX538261.1|HSM806504 Homo sapiens genomic DNA; cDNA DKFZp686J1844 (from clone
           DKFZp686J1844)
          Length = 7326

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 atgaaaaagaaaatgaggag 356
           ||||||||||||||||||||
Sbjct: 817 atgaaaaagaaaatgaggag 798
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>gb|AF474179.1| Rhesus cytomegalovirus US3 protein (US3), US2 protein (US2), and US1
            protein (US1) genes, complete cds
          Length = 7325

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  cgcctctcccgccctccgcg 162
            ||||||||||||||||||||
Sbjct: 4757 cgcctctcccgccctccgcg 4776
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>gb|AC093538.2| Homo sapiens chromosome 5 clone RP11-99I23, complete sequence
          Length = 200500

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 59    gctgtggaggaagctgggcaagaagcag 86
             |||||||||||||||| | |||||||||
Sbjct: 32572 gctgtggaggaagctgaggaagaagcag 32599
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 26      ggacgaggcggcggtggcgg 45
               ||||||||||||||||||||
Sbjct: 1028827 ggacgaggcggcggtggcgg 1028808
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 18       acggcgggggacgaggcggcggtggcgg 45
                |||||||||||||||| ||| |||||||
Sbjct: 28595202 acggcgggggacgaggaggccgtggcgg 28595229
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>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034C09
          Length = 170226

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 18     acggcgggggacgaggcggcggtggcgg 45
              |||||||||||||||| ||| |||||||
Sbjct: 121641 acggcgggggacgaggaggccgtggcgg 121668
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      acttcgaggaggccgtcgcc 107
               ||||||||||||||||||||
Sbjct: 3515488 acttcgaggaggccgtcgcc 3515469
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 100     ccgtcgccgacctcaccgcc 119
               ||||||||||||||||||||
Sbjct: 6636313 ccgtcgccgacctcaccgcc 6636332
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>gb|AC010349.7|AC010349 Homo sapiens chromosome 5 clone CTD-2020O7, complete sequence
          Length = 165967

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 59    gctgtggaggaagctgggcaagaagcag 86
             |||||||||||||||| | |||||||||
Sbjct: 83702 gctgtggaggaagctgaggaagaagcag 83729
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>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     ggacgaggcggcggtggcgg 45
              ||||||||||||||||||||
Sbjct: 109877 ggacgaggcggcggtggcgg 109896
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>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ggacgaggcggcggtggcgg 45
             ||||||||||||||||||||
Sbjct: 16270 ggacgaggcggcggtggcgg 16289
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>dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0021C10
          Length = 119527

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   acctcaccgccacgctccgcgacc 132
             ||||||||||||||||||| ||||
Sbjct: 18245 acctcaccgccacgctccgtgacc 18222
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>dbj|AK102664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101K22, full
           insert sequence
          Length = 2023

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 109 acctcaccgccacgctccgcgacc 132
           ||||||||||||||||||| ||||
Sbjct: 335 acctcaccgccacgctccgtgacc 358
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>gb|AF175223.1|AF175223 Drosophila melanogaster SANT domain protein SMRTER (Smrter) mRNA,
            complete cds
          Length = 11296

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 33   gcggcggtggcggagcgcctggag 56
            |||| |||||||||||||||||||
Sbjct: 9854 gcggtggtggcggagcgcctggag 9877
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>dbj|AK069572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023H24, full
           insert sequence
          Length = 2047

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 109 acctcaccgccacgctccgcgacc 132
           ||||||||||||||||||| ||||
Sbjct: 357 acctcaccgccacgctccgtgacc 380
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>dbj|AK067409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102H16, full
           insert sequence
          Length = 3780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  ggacgaggcggcggtggcgg 45
           ||||||||||||||||||||
Sbjct: 241 ggacgaggcggcggtggcgg 222
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>gb|AC100967.15| Mus musculus chromosome 5, clone RP23-74L20, complete sequence
          Length = 229660

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    ggaagctgggcaagaagcag 86
             ||||||||||||||||||||
Sbjct: 87924 ggaagctgggcaagaagcag 87943
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 97      aggccgtcgccgacctcacc 116
               ||||||||||||||||||||
Sbjct: 4025169 aggccgtcgccgacctcacc 4025150
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>gb|AY609873.1| Sus scrofa clone Clu_37058.scr.msk.p1.Contig2, mRNA sequence
          Length = 1410

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   ggaggaagctgggcaagaag 83
            ||||||||||||||||||||
Sbjct: 1093 ggaggaagctgggcaagaag 1074
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 28    acgaggcggcggtggcggagcgcctgga 55
             ||||| |||| |||||||||||||||||
Sbjct: 94107 acgagacggccgtggcggagcgcctgga 94080
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>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 334     ttgatgaaaaagaaaatgag 353
               ||||||||||||||||||||
Sbjct: 1332448 ttgatgaaaaagaaaatgag 1332467


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,582,902
Number of Sequences: 3902068
Number of extensions: 3582902
Number of successful extensions: 97355
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94609
Number of HSP's gapped (non-prelim): 2746
length of query: 393
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 371
effective length of database: 17,147,199,772
effective search space: 6361611115412
effective search space used: 6361611115412
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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