Clone Name | bart53c06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AOC3_ARATH (Q9LS01) Allene oxide cyclase 3, chloroplast precurso... | 97 | 3e-20 | 2 | AOC4_ARATH (Q93ZC5) Allene oxide cyclase 4, chloroplast precurso... | 96 | 5e-20 | 3 | AOC2_ARATH (Q9LS02) Allene oxide cyclase 2, chloroplast precurso... | 85 | 1e-16 | 4 | AOC1_ARATH (Q9LS03) Allene oxide cyclase 1, chloroplast precurso... | 84 | 2e-16 | 5 | HLES_DROME (Q02308) Protein hairless | 29 | 5.3 | 6 | PCCB_DROME (Q9V9A7) Putative propionyl-CoA carboxylase beta chai... | 29 | 6.9 |
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>AOC3_ARATH (Q9LS01) Allene oxide cyclase 3, chloroplast precursor (EC| 5.3.99.6) Length = 258 Score = 96.7 bits (239), Expect = 3e-20 Identities = 44/68 (64%), Positives = 55/68 (80%) Frame = +3 Query: 267 DARPSKVQELHVYEPNERDRESPAYLRLSANQSQNALGDLVPFTNKVYNGSLDKRIGITA 446 ++RPSK+QEL+VYE NE DR SPA L+L ++ LGDLVPFTNK+Y G L KR+GITA Sbjct: 79 NSRPSKIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTNKLYTGDLKKRVGITA 138 Query: 447 GICILIQH 470 G+C+LIQH Sbjct: 139 GLCVLIQH 146
>AOC4_ARATH (Q93ZC5) Allene oxide cyclase 4, chloroplast precursor (EC| 5.3.99.6) Length = 254 Score = 95.9 bits (237), Expect = 5e-20 Identities = 45/67 (67%), Positives = 53/67 (79%) Frame = +3 Query: 270 ARPSKVQELHVYEPNERDRESPAYLRLSANQSQNALGDLVPFTNKVYNGSLDKRIGITAG 449 +RP+K+QEL+VYE NE DR SPA L+L Q LGDLVPFTNK+Y G L KRIGITAG Sbjct: 76 SRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNKLYTGDLTKRIGITAG 135 Query: 450 ICILIQH 470 +C+LIQH Sbjct: 136 LCVLIQH 142
>AOC2_ARATH (Q9LS02) Allene oxide cyclase 2, chloroplast precursor (EC| 5.3.99.6) Length = 253 Score = 84.7 bits (208), Expect = 1e-16 Identities = 42/66 (63%), Positives = 50/66 (75%) Frame = +3 Query: 273 RPSKVQELHVYEPNERDRESPAYLRLSANQSQNALGDLVPFTNKVYNGSLDKRIGITAGI 452 RPSKVQEL VYE NE DR SP L+ +A LGDLVPFTNK+Y G L KR+GITAG+ Sbjct: 77 RPSKVQELSVYEINELDRHSPKILK-NAFSLMFGLGDLVPFTNKLYTGDLKKRVGITAGL 135 Query: 453 CILIQH 470 C++I+H Sbjct: 136 CVVIEH 141
>AOC1_ARATH (Q9LS03) Allene oxide cyclase 1, chloroplast precursor (EC| 5.3.99.6) (Early-responsive to dehydration 12 protein) Length = 254 Score = 84.0 bits (206), Expect = 2e-16 Identities = 41/66 (62%), Positives = 51/66 (77%) Frame = +3 Query: 273 RPSKVQELHVYEPNERDRESPAYLRLSANQSQNALGDLVPFTNKVYNGSLDKRIGITAGI 452 RPSKVQEL VYE N+ DR SP L+ +A + LGDLVPFTNK+Y G L KR+GITAG+ Sbjct: 78 RPSKVQELSVYEINDLDRHSPKILK-NAFSFRFGLGDLVPFTNKLYTGDLKKRVGITAGL 136 Query: 453 CILIQH 470 C++I+H Sbjct: 137 CVVIEH 142
>HLES_DROME (Q02308) Protein hairless| Length = 1077 Score = 29.3 bits (64), Expect = 5.3 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Frame = +3 Query: 246 PKPAVAMDARPSKVQELHVYEPNERDRESPAYLRLSANQSQNALGDLVPFTNKV---YNG 416 PK AV+ D+ + EP +D ++++ ++ + + +L TN V NG Sbjct: 427 PKKAVSDDSESKEASPGQQVEPQPKDETVDVEMKMNTSEDEEPMTELPRITNAVNGDLNG 486 Query: 417 SLDKRIG 437 L IG Sbjct: 487 DLKASIG 493
>PCCB_DROME (Q9V9A7) Putative propionyl-CoA carboxylase beta chain,| mitochondrial precursor (EC 6.4.1.3) (PCCase beta subunit) (Propanoyl-CoA:carbon dioxide ligase beta subunit) Length = 578 Score = 28.9 bits (63), Expect = 6.9 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%) Frame = +3 Query: 279 SKVQELHVYEPN----ERDRESPAYLRLSANQSQNALGDLVPFTNKVYNGSLDKRI 434 S+V+ LHV + N E D++S Y + +A + + +GDL FT++V G K I Sbjct: 17 SQVRLLHVGDANVLHSEVDKQSAEY-KENAREMASLVGDLRNFTSQVLKGGGQKAI 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,407,317 Number of Sequences: 219361 Number of extensions: 458383 Number of successful extensions: 1447 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1429 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1445 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)