Clone Information

BLAST Search Result

Clone Name	bart53b05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (...	55	8e-08
2	PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11...	53	4e-07
3	BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 ...	45	1e-04
4	BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 ...	44	2e-04
5	PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor (Po...	42	9e-04
6	TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precur...	40	0.003
7	DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100...	40	0.004
8	DNMT1_RAT (Q9Z330) DNA (cytosine-5)-methyltransferase 1 (EC 2.1....	38	0.013
9	PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor (Po...	37	0.021
10	PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor (Polyg...	37	0.028
11	NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.1...	37	0.036
12	RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC...	36	0.048
13	DNMT1_CHICK (Q92072) DNA (cytosine-5)-methyltransferase 1 (EC 2....	35	0.081
14	SLIT_DROME (P24014) Protein slit precursor [Contains: Protein sl...	34	0.18
15	AMO_PICAN (P12807) Peroxisomal copper amine oxidase (EC 1.4.3.6)...	34	0.24
16	RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2...	34	0.24
17	PCDBF_PANTR (Q5DRD3) Protocadherin beta 15 precursor (PCDH-beta15)	33	0.53
18	PCDBF_HUMAN (Q9Y5E8) Protocadherin beta 15 precursor (PCDH-beta15)	33	0.53
19	LAMC3_HUMAN (Q9Y6N6) Laminin gamma-3 chain precursor (Laminin 12...	33	0.53
20	LAP4_DROME (Q7KRY7) Protein lap4 (Protein scribble) (Protein sme...	33	0.53
21	RNF31_HUMAN (Q96EP0) RING finger protein 31 (Zinc in-between-RIN...	33	0.53
22	VASN_MOUSE (Q9CZT5) Vasorin precursor (Protein Slit-like 2)	32	0.69
23	NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7...	32	0.69
24	YETS2_MOUSE (Q3TUF7) YEATS domain-containing protein 2	32	0.69
25	ACH10_RAT (Q9JLB5) Neuronal acetylcholine receptor protein, alph...	32	0.90
26	PI3R6_HUMAN (Q5UE93) Phosphoinositide 3-kinase regulatory subuni...	32	1.2
27	IF2_CAUCR (Q9AC25) Translation initiation factor IF-2	32	1.2
28	BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ...	31	1.5
29	DNMT1_HUMAN (P26358) DNA (cytosine-5)-methyltransferase 1 (EC 2....	31	2.0
30	TIP60_DROME (Q960X4) Histone acetyltransferase Tip60 (EC 2.3.1.48)	31	2.0
31	INLA_LISMO (P25146) Internalin A precursor	31	2.0
32	INLA_LISMF (Q723K6) Internalin A precursor	31	2.0
33	CHAO_DROME (P12024) Chaoptin precursor (Photoreceptor cell-speci...	30	2.6
34	NETR_MOUSE (O08762) Neurotrypsin precursor (EC 3.4.21.-) (Motops...	30	2.6
35	THAP7_MOUSE (Q8VCZ3) THAP domain-containing protein 7	30	2.6
36	DNMT1_MOUSE (P13864) DNA (cytosine-5)-methyltransferase 1 (EC 2....	30	3.4
37	UXAA_BACSU (O34673) Altronate hydrolase (EC 4.2.1.7) (Altronic a...	30	3.4
38	PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor (Po...	30	3.4
39	PEP1A_STRCO (Q9L1K2) Putative glucanohydrolase pep1A (EC 3.2.1.-)	30	3.4
40	RS5_DEIRA (Q9RSL1) 30S ribosomal protein S5	30	4.4
41	FA5_BOVIN (Q28107) Coagulation factor V precursor (Activated pro...	30	4.4
42	VASN_HUMAN (Q6EMK4) Vasorin precursor (Protein Slit-like 2)	30	4.4
43	TLR3_HUMAN (O15455) Toll-like receptor 3 precursor (CD283 antigen)	30	4.4
44	EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-...	30	4.4
45	EAR2_MOUSE (P43136) Orphan nuclear receptor EAR-2 (V-erbA-relate...	30	4.4
46	GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precu...	30	4.4
47	ALS_HUMAN (P35858) Insulin-like growth factor-binding protein co...	30	4.4
48	TM55B_XENLA (Q5XKA6) Transmembrane protein 55B (EC 3.1.3.-) (Typ...	30	4.4
49	LAMB3_HUMAN (Q13751) Laminin beta-3 chain precursor (Laminin 5 b...	30	4.4
50	LAP4_MOUSE (Q80U72) LAP4 protein (Scribble homolog protein)	29	5.8
51	DTX2_HUMAN (Q86UW9) Protein deltex-2 (Deltex-2) (Deltex2) (hDTX2)	29	5.8
52	ACH10_HUMAN (Q9GZZ6) Neuronal acetylcholine receptor protein, al...	29	5.8
53	LRC21_MOUSE (Q8K099) Leucine-rich repeat-containing protein 21 p...	29	5.8
54	LAP4_HUMAN (Q14160) LAP4 protein (Scribble homolog protein) (hSc...	29	5.8
55	DISC_DROME (P23792) Protein disconnected	29	5.8
56	OST2_HUMAN (Q9Y278) Heparan sulfate glucosamine 3-O-sulfotransfe...	29	5.8
57	CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displace...	29	5.8
58	BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associa...	29	5.8
59	RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subun...	29	7.6
60	TOLIP_HUMAN (Q9H0E2) Toll-interacting protein	29	7.6
61	SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-a...	29	7.6
62	PROP1_BOVIN (Q8MJI9) Homeobox protein prophet of Pit-1 (PROP-1) ...	29	7.6
63	IF2G_SPIVO (O36041) Eukaryotic translation initiation factor 2 g...	29	7.6
64	UXAA_ECOLI (P42604) Altronate hydrolase (EC 4.2.1.7) (Altronic a...	29	7.6
65	PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase...	29	7.6
66	LAP1_CAEEL (O61967) Protein lap1 (Protein lethal-413)	29	7.6
67	EAR2_RAT (O09017) Orphan nuclear receptor EAR-2 (V-erbA-related ...	29	7.6
68	ALS_PAPHA (O02833) Insulin-like growth factor-binding protein co...	29	7.6
69	BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-assoc...	29	7.6
70	ATF7_MOUSE (Q8R0S1) Cyclic AMP-dependent transcription factor AT...	28	9.9
71	RDH1_BOVIN (Q27979) 11-cis retinol dehydrogenase (EC 1.1.1.105) ...	28	9.9
72	SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-as...	28	9.9
73	PCDB3_PANTR (Q5DRD1) Protocadherin beta 3 precursor (PCDH-beta3)	28	9.9
74	PCDB3_HUMAN (Q9Y5E6) Protocadherin beta 3 precursor (PCDH-beta3)	28	9.9
75	FOXM1_HUMAN (Q08050) Forkhead box protein M1 (Forkhead-related p...	28	9.9
76	LRC21_RAT (Q9JMH2) Leucine-rich repeat-containing protein 21 pre...	28	9.9
77	GLNE_RHIME (Q92R86) Glutamate-ammonia-ligase adenylyltransferase...	28	9.9
78	RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subun...	28	9.9
79	YPMF_ECOLI (P07116) Hypothetical mobilization operon protein F	28	9.9

>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
           (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
 Frame = +1

Query: 106 SDAQATS-CHPDDLHALQNFAGNLIVGGVLLRDTWFGTACCNWEGVGCDS-ASGRVTALR 279
           S++Q TS CHP DL AL++F  +L        ++   T CCNW G+ C+S  +GRV  L 
Sbjct: 23  SESQTTSRCHPHDLEALRDFIAHLEPKPDGWINSSSSTDCCNWTGITCNSNNTGRVIRLE 82

Query: 280 LPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKN 444
           L  + L+G +   SL  L  +  L+L  N +++   +   +   +NL TL L+ N
Sbjct: 83  LGNKKLSGKL-SESLGKLDEIRVLNLSRNFIKD--SIPLSIFNLKNLQTLDLSSN 134



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 28/69 (40%), Positives = 39/69 (56%)
 Frame = +1

Query: 262 RVTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTK 441
           R+  + L R    G +P  S      L    L +++L NIS  L +L+ C+NLTTL+LT 
Sbjct: 341 RLKNVNLARNTFHGQVP-ESFKNFESLSYFSLSNSSLANISSALGILQHCKNLTTLVLTL 399

Query: 442 NFGGEELPN 468
           NF GE LP+
Sbjct: 400 NFHGEALPD 408

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>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)|
           (Phytosulfokine LRR receptor kinase)
          Length = 1021

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
 Frame = +1

Query: 109 DAQATSCHPDDLHALQNFAGNL---IVGGVLLRDTWFGTACCNWEGVGCDSA-------- 255
           ++Q  +C+ +DL AL+ F   L   I G      + F + CC+W G+ C S+        
Sbjct: 23  NSQNLTCNSNDLKALEGFMRGLESSIDGWKWNESSSFSSNCCDWVGISCKSSVSLGLDDV 82

Query: 256 --SGRVTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTL 429
             SGRV  L L RR L+G +   S+A L +L+ L+L  N+L     +   L    NL  L
Sbjct: 83  NESGRVVELELGRRKLSGKL-SESVAKLDQLKVLNLTHNSLS--GSIAASLLNLSNLEVL 139

Query: 430 ILTKN 444
            L+ N
Sbjct: 140 DLSSN 144



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = +1

Query: 319 SLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKNFGGEELPN 468
           S      L  L   ++++QNIS  L +L+ CQNL TL+LT NF  EELP+
Sbjct: 369 SFKNFQSLTSLSFSNSSIQNISSALEILQHCQNLKTLVLTLNFQKEELPS 418



 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 274 LRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNL 372
           L L    L+G IP  +L+G+  LE LDL  NNL
Sbjct: 562 LNLKNNNLSGNIPA-NLSGMTSLEVLDLSHNNL 593

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>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3)
          Length = 1164

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 36/96 (37%), Positives = 43/96 (44%)
 Frame = +1

Query: 157 NFAGNLIVGGVLLRDTWFGTACCNWEGVGCDSASGRVTALRLPRRGLTGPIPGTSLAGLA 336
           NF GN   G         G   C W GV C S+ GRV  L L   GLTG +   +L  L+
Sbjct: 51  NFLGNWRYGS--------GRDPCTWRGVSC-SSDGRVIGLDLRNGGLTGTLNLNNLTALS 101

Query: 337 RLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKN 444
            L  L L  NN    SG  +   GC +L  L L+ N
Sbjct: 102 NLRSLYLQGNNFS--SGDSSSSSGC-SLEVLDLSSN 134



 Score = 30.4 bits (67), Expect = 2.6
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +1

Query: 265 VTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNL 372
           +  L L    L G +PG SL GL+ L DLD+ +NNL
Sbjct: 689 IGVLDLSHNDLQGFLPG-SLGGLSFLSDLDVSNNNL 723

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>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
          Length = 1166

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 23/101 (22%)
 Frame = +1

Query: 211 GTACCNWEGVGCDSASGRVTALRLPRRGLTGPIPGTSLAGLARLED-------------- 348
           G   C+W GV C S  GR+  L L   GLTG +   +L  L  L++              
Sbjct: 62  GRGSCSWRGVSC-SDDGRIVGLDLRNSGLTGTLNLVNLTALPNLQNLYLQGNYFSSGGDS 120

Query: 349 ---------LDLGSNNLQNISGVLTVLRGCQNLTTLILTKN 444
                    LDL SN++ + S V  V   C NL ++ ++ N
Sbjct: 121 SGSDCYLQVLDLSSNSISDYSMVDYVFSKCSNLVSVNISNN 161



 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 265 VTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNL 372
           +  L L    L G +PG SL  L+ L DLD+ +NNL
Sbjct: 689 IGVLDLSHNNLQGYLPG-SLGSLSFLSDLDVSNNNL 723

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>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (Floral organ
           regulator 1)
          Length = 332

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 41/126 (32%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
 Frame = +1

Query: 67  FMXXXXXXXXXXXSDAQATSCHPDDLHALQNFAGNLIVGGVLLRDTWF--GTACCNWEGV 240
           FM           + A+A  C P D  AL     +L  G      TW      CC W+ V
Sbjct: 7   FMLAVLLAVAVAAAPARAVRCPPSDKQALMRVKQSL--GNPATLSTWSLASADCCEWDHV 64

Query: 241 GCDSASGRVTALRLP-RRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISG----VLTVLR 405
            CD A GRV  + +     + G IP +++AGL  L  L L    L  +SG     LT L 
Sbjct: 65  RCDEA-GRVNNVFIDGANDVRGQIP-SAVAGLTALMSLSL--FRLPGLSGPIPACLTALS 120

Query: 406 GCQNLT 423
             Q LT
Sbjct: 121 NLQFLT 126

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>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
 Frame = +1

Query: 193 LRDTWFGT-ACCNWEGVGCDSASGRVTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNN 369
           L ++W G   C NW G+ C  ++G +T + L +  LTG I       +  L+ + LG NN
Sbjct: 341 LAESWKGNDPCTNWIGIAC--SNGNITVISLEKMELTGTI-SPEFGAIKSLQRIILGINN 397

Query: 370 LQN-ISGVLTVLRGCQNLTTLILTKN 444
           L   I   LT L    NL TL ++ N
Sbjct: 398 LTGMIPQELTTL---PNLKTLDVSSN 420



 Score = 32.3 bits (72), Expect = 0.69
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +1

Query: 274 LRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKN-FG 450
           L L    ++GP+P  SL+GLA L+ L L +NN  +I     V +G  +L ++ +  N F 
Sbjct: 93  LELQWNNISGPVP--SLSGLASLQVLMLSNNNFDSIPS--DVFQGLTSLQSVEIDNNPFK 148

Query: 451 GEELP 465
             E+P
Sbjct: 149 SWEIP 153

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>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor|
          Length = 372

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +1

Query: 127 CHPDDLHALQNFAGNLIVGGVLLRDTWF-GTACCN-WEGVGCDSASGRVTALRL 282
           C P D  AL  F  +L    + + +TW   T CC  W G+ CD  SGRVT + L
Sbjct: 27  CSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISL 80

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>DNMT1_RAT (Q9Z330) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)|
           (DNA methyltransferase I) (DNA MTase RnoIP) (MCMT)
           (M.RnoIP)
          Length = 1622

 Score = 38.1 bits (87), Expect = 0.013
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
 Frame = +3

Query: 135 RRPSRAAELCGEPHCRRCPPPGHVVWYRMLQLGGRGM*LR---QRPCDSAAPPQARPHGA 305
           RR     E+C +P C +C          M++ GG G   +   +R C + A  +A     
Sbjct: 654 RRRCGVCEVCQQPECGKCK-----ACKDMVKFGGTGRSKQACLKRRCPNLAVKEADEDEE 708

Query: 306 HPRDLPCRPCTARGSRPWLQQFTKHLRGTYRVAWVSEPHHVDSHQEFWW 452
              D+P  P   +     L Q  K  +   R++W+ EP  ++ ++ ++W
Sbjct: 709 ADDDIPELPSPKK-----LHQGKKKKQNKDRISWLGEPVKIEENRTYYW 752

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>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2)
          Length = 342

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
 Frame = +1

Query: 106 SDAQATSCHPDDLHALQNFAGNLIVGGVLLRDTWFGTA-CCN--WEGVGCDSASGRVTAL 276
           S A +  C+P D  AL     +L  G      +W  T  CCN  W GV CD+ +      
Sbjct: 25  STAHSELCNPQDKQALLQIKKDL--GNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVN 82

Query: 277 RLPRRGLTGPIP---GTSLAGLARLEDLDLGS-NNL 372
            L   GL  P P    +SLA L  L  L +G  NNL
Sbjct: 83  NLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNL 118

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>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor|
           (Polygalacturonase-inhibiting protein)
          Length = 330

 Score = 37.0 bits (84), Expect = 0.028
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
 Frame = +1

Query: 127 CHPDDLHALQNFAGNLIVGGVLLRDTWFG-TACCNWEGVGCDSASGRVTALRLPRRGLTG 303
           C+PDD   L         G   +  +W   T CC+W  V CDS + R+ +L +    ++G
Sbjct: 27  CNPDDKKVLLQI--KKAFGDPYVLASWKSDTDCCDWYCVTCDSTTNRINSLTIFAGQVSG 84

Query: 304 PIPGTSLAGLARLEDLDLGS--NNLQNISGVLTVLRGCQNL 420
            IP   +  L  LE L+     N    I   +  L+G ++L
Sbjct: 85  QIPAL-VGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKSL 124

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>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)|
          Length = 924

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
 Frame = +1

Query: 199 DTWFGTACC--NWEGVGCDSASGR--VTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSN 366
           ++W G  C    W+GV CD ++G   +T L L    L G IP +S+  + +L+ L+L  N
Sbjct: 381 ESWSGDPCMLFPWKGVACDGSNGSSVITKLDLSSSNLKGTIP-SSVTEMTKLQILNLSHN 439

Query: 367 N 369
           +
Sbjct: 440 H 440

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>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 36.2 bits (82), Expect = 0.048
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +1

Query: 223 CNWEGVGCDSASGRVTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTV- 399
           C W GV CD A+  V ++ L    L GP P + L  L  L  L L +N   +I+G L+  
Sbjct: 54  CKWLGVSCD-ATSNVVSVDLSSFMLVGPFP-SILCHLPSLHSLSLYNN---SINGSLSAD 108

Query: 400 -LRGCQNLTTLILTKN 444
               C NL +L L++N
Sbjct: 109 DFDTCHNLISLDLSEN 124



 Score = 28.9 bits (63), Expect = 7.6
 Identities = 22/56 (39%), Positives = 27/56 (48%)
 Frame = +1

Query: 298 TGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKNFGGEELP 465
           +G IP  SL  L +L  LDL  N L     +   LRG +NL  L L  N    E+P
Sbjct: 488 SGEIP-ESLVKLKQLSRLDLSKNQLSG--EIPRELRGWKNLNELNLANNHLSGEIP 540

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>DNMT1_CHICK (Q92072) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)|
           (DNA methyltransferase GgaI) (DNA MTase GgaI) (MCMT)
           (M.GgaI)
          Length = 1537

 Score = 35.4 bits (80), Expect = 0.081
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
 Frame = +3

Query: 135 RRPSRAAELCGEPHCRRCPPPGHVVWYRMLQLGGRGM*LR---QRPCDSAAPPQARPHGA 305
           RR     E+C +P C +C          M++ GG G   +   QR C + A  +A     
Sbjct: 562 RRRCGVCEVCQQPECGKCK-----ACQNMVKFGGSGRSKQACLQRRCPNLAVREADEDEE 616

Query: 306 HPRDLPCRPCTARGSRPWLQQFTKHLRGTYRVAWVSEPHHVDSHQEFW 449
              ++P  P   +     + Q  K  +   R++WV EP   D  ++F+
Sbjct: 617 VDDNIPEMPSPKK-----MLQGRKKKQNKSRISWVGEPIKSDGKKDFY 659

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>SLIT_DROME (P24014) Protein slit precursor [Contains: Protein slit N-product;|
           Protein slit C-product]
          Length = 1504

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +1

Query: 268 TALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKN 444
           T LRL +  +T  +P  S +   RL  +DL +NN+  I+     L G + LTTL+L  N
Sbjct: 349 TELRLEQNFIT-ELPPKSFSSFRRLRRIDLSNNNISRIAH--DALSGLKQLTTLVLYGN 404

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>AMO_PICAN (P12807) Peroxisomal copper amine oxidase (EC 1.4.3.6) (Methylamine|
           oxidase)
          Length = 692

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +2

Query: 221 AATGRAWDVTPPAAV*QRCASPGAASRGPSQGPPLPALHGSRISTLAP 364
           +ATGR+WD+  P  V      P +     +Q PPL A  GS ++  AP
Sbjct: 517 SATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAP 564

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>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 24/65 (36%), Positives = 33/65 (50%)
 Frame = +1

Query: 271 ALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKNFG 450
           +L L    L G +P   L  L  LE+LD+  NNL   SG L VL   Q+LT + ++ N  
Sbjct: 646 SLNLSSNKLNGQLP-IDLGKLKMLEELDVSHNNL---SGTLRVLSTIQSLTFINISHNLF 701

Query: 451 GEELP 465
              +P
Sbjct: 702 SGPVP 706

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>PCDBF_PANTR (Q5DRD3) Protocadherin beta 15 precursor (PCDH-beta15)|
          Length = 787

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = +1

Query: 283 PRRGLTGPIPGTSLAG----LARLEDLDLGSNNLQN 378
           P R +T  IP TS  G    L +  DLD+GSNN+QN
Sbjct: 134 PEREITLKIPETSSLGTVFPLKKARDLDVGSNNVQN 169

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>PCDBF_HUMAN (Q9Y5E8) Protocadherin beta 15 precursor (PCDH-beta15)|
          Length = 787

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = +1

Query: 283 PRRGLTGPIPGTSLAG----LARLEDLDLGSNNLQN 378
           P R +T  IP TS  G    L +  DLD+GSNN+QN
Sbjct: 134 PEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQN 169

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>LAMC3_HUMAN (Q9Y6N6) Laminin gamma-3 chain precursor (Laminin 12 gamma 3 subunit)|
          Length = 1587

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 27/94 (28%), Positives = 33/94 (35%)
 Frame = +3

Query: 69   HAAPCSLLGVSLVRCASDFVPPRRPSRAAELCGEPHCRRCPPPGHVVWYRMLQLGGRGM* 248
            H  PC        +C+ + V P        L G  HC RC            Q G  G  
Sbjct: 803  HPQPCHQC-----QCSGN-VDPNAVGNCDPLSG--HCLRCLHNTTGDHCEHCQEGFYGSA 854

Query: 249  LRQRPCDSAAPPQARPHGAHPRDLPCRPCTARGS 350
            L  RP D   P    P G+    +PC P T + S
Sbjct: 855  LAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCS 888

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>LAP4_DROME (Q7KRY7) Protein lap4 (Protein scribble) (Protein smell-impaired)|
          Length = 1851

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 19/45 (42%), Positives = 26/45 (57%)
 Frame = +1

Query: 322 LAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKNFGGE 456
           +A L+RL  L L  N LQ ++  L     C+N+  LILT+NF  E
Sbjct: 263 IAKLSRLTILKLDQNRLQRLNDTLG---NCENMQELILTENFLSE 304

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>RNF31_HUMAN (Q96EP0) RING finger protein 31 (Zinc in-between-RING-finger|
           ubiquitin-associated domain protein)
          Length = 1072

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 22/75 (29%), Positives = 27/75 (36%)
 Frame = +2

Query: 11  DRALAKSLPPPQ*IPWPNASCCSL*SSWRFSCPMRKRLRATPTTFTRCRTLRGTSLSEVS 190
           D +L+   P    +PW  A+C  L   W   C              R R  +G  L    
Sbjct: 289 DSSLSSPNPASAHLPWHCAACAMLNEPWAVLC----------VACDRPRGCKGLGLGTEG 338

Query: 191 SSGTRGLVPHAATGR 235
             GT GL P  A GR
Sbjct: 339 PQGTGGLEPDLARGR 353

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>VASN_MOUSE (Q9CZT5) Vasorin precursor (Protein Slit-like 2)|
          Length = 673

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 24/69 (34%), Positives = 32/69 (46%)
 Frame = +1

Query: 238 VGCDSASGRVTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQN 417
           VGC +    +  L L +  +T  +PG     L  L +LDL +N L  IS      RG + 
Sbjct: 70  VGCFAGLPGLQLLDLSQNQITS-LPGGIFQPLVNLSNLDLTANKLHEISN--ETFRGLRR 126

Query: 418 LTTLILTKN 444
           L  L L KN
Sbjct: 127 LERLYLGKN 135



 Score = 29.3 bits (64), Expect = 5.8
 Identities = 24/63 (38%), Positives = 30/63 (47%)
 Frame = +1

Query: 256 SGRVTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLIL 435
           +  V ALRL   GL     G     L  L DLD+  N L+++  V+  LRG   LT L L
Sbjct: 192 TANVEALRLAGLGLRQLDEGL-FGRLLNLHDLDVSDNQLEHMPSVIQGLRG---LTRLRL 247

Query: 436 TKN 444
             N
Sbjct: 248 AGN 250

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>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does|
           not make infections protein 2) (Symbiosis receptor-like
           kinase) (MtSYMRK)
          Length = 925

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
 Frame = +1

Query: 199 DTWFGTACC--NWEGVGCDSASGR--VTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSN 366
           ++W G  C    W+G+ CD ++G   +T L L    L G IP + +  +  L+ L+L  N
Sbjct: 383 ESWSGDPCMIFPWKGITCDDSTGSSIITKLDLSSNNLKGAIP-SIVTKMTNLQILNLSHN 441

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>YETS2_MOUSE (Q3TUF7) YEATS domain-containing protein 2|
          Length = 1407

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 3/131 (2%)
 Frame = +2

Query: 59  PNASCCSL*SSWRFSCPMRKRLRATPTTFTRCRTLRGTSLSEVSSSGTRGLVPHAAT--- 229
           P    C + S    S P    L  TPT+ T     +GT+ S VS+       PH      
Sbjct: 453 PITMSCKIVSGSPISTPSPSPLPRTPTS-TPVHLKQGTASSGVSN-------PHVIVDKP 504

Query: 230 GRAWDVTPPAAV*QRCASPGAASRGPSQGPPLPALHGSRISTLAPTIYKTSQGYLPCCVG 409
           G+    + P+        P A+      G P+P +HGS   T      ++    +P    
Sbjct: 505 GQVIGASTPSTGSPTSKLPVASQASQGTGSPIPKIHGSSFLTSTVKQEESLFASMPPLCP 564

Query: 410 VRTSPR*FSPR 442
           + + P+  SP+
Sbjct: 565 IGSHPKVQSPK 575

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>ACH10_RAT (Q9JLB5) Neuronal acetylcholine receptor protein, alpha-10 subunit|
           precursor (Nicotinic acetylcholine receptor subunit
           alpha 10) (NACHR alpha 10)
          Length = 447

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = +3

Query: 186 CPPPGHVV--WYRMLQLG--GRGM*LRQR--PCDSAAPPQARPHGAHPRDLPCRPC 335
           C P  H V  W R+L LG   +G+ +R+R  PC  + P ++ P    P   P  PC
Sbjct: 325 CGPNAHPVPAWARVLLLGHLAKGLCVRERGEPCGQSKPLESAPSLQPPPASPAGPC 380

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>PI3R6_HUMAN (Q5UE93) Phosphoinositide 3-kinase regulatory subunit 6|
           (Phosphoinositide 3-kinase gamma adapter protein of 87
           kDa) (p87 PI3K adapter protein) (p87PIKAP)
          Length = 754

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +3

Query: 15  EHLPNHSLHLNESHGQMLHAAPCSLLGVSLVRCASDFVPPRRPS 146
           E + + +    E H + L    CSLLG +  RC  D V  R PS
Sbjct: 234 EQMASEASPSREGHVERLEEIYCSLLGPAAGRCGGDLVQERPPS 277

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>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2|
          Length = 1009

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = -2

Query: 339 PCKAGKGGPWDGPREAAPGEAQRCHTAAGGVTSHALPVAACGTKPRVPEEDTS--DNEVP 166
           P   G GGP  GPR   P  A    T      + + P    G   R P+ED     N  P
Sbjct: 305 PGARGPGGPPRGPRPGVPAAAPA--TPEIQRATRSAPRPGGGAMDRRPDEDDDRRKNAAP 362

Query: 165 RKVLQRVK 142
            K + RVK
Sbjct: 363 NKAVSRVK 370

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>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2)
           (Protein VASCULAR HIGHWAY 1)
          Length = 1143

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +1

Query: 250 SASGRVTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQN-ISGVLTVLRGCQNLTT 426
           S    + ++ L     TG +P        +L+ LDL  NN+   ISG+   L  C ++T 
Sbjct: 149 SKYSNLISITLSYNNFTGKLPNDLFLSSKKLQTLDLSYNNITGPISGLTIPLSSCVSMTY 208

Query: 427 LILTKN 444
           L  + N
Sbjct: 209 LDFSGN 214

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>DNMT1_HUMAN (P26358) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)|
           (DNA methyltransferase HsaI) (DNA MTase HsaI) (MCMT)
           (M.HsaI)
          Length = 1616

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
 Frame = +3

Query: 135 RRPSRAAELCGEPHCRRCPPPGHVVWYRMLQLGGRG---M*LRQRPCDSAAPPQARPHGA 305
           RR     E+C +P C +C          M++ GG G      ++R C + A  +A     
Sbjct: 650 RRRCGVCEVCQQPECGKCK-----ACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEE 704

Query: 306 HPRDLPCRPCTARGSRPWLQQFTKHLRGTYRVAWVSEPHHVDSHQEFW 449
              ++P  P   +     + Q  K  +   R++WV E    D  + ++
Sbjct: 705 VDDNIPEMPSPKK-----MHQGKKKKQNKNRISWVGEAVKTDGKKSYY 747

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>TIP60_DROME (Q960X4) Histone acetyltransferase Tip60 (EC 2.3.1.48)|
          Length = 541

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
 Frame = +2

Query: 137 TTFTRCRTLRGTSLSEVS----SSGTRGLVPHAATGRAWDVTPPAAV*QRCASPGAASRG 304
           TT  R  +L G+     S     SG    +P   TG +  V PPA +    A PG  S G
Sbjct: 98  TTPQRHHSLAGSVSRPTSPQHPGSGALAAIPQTPTGASGSVPPPAGIPNSVAPPGTPSSG 157

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>INLA_LISMO (P25146) Internalin A precursor|
          Length = 800

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 23/69 (33%), Positives = 35/69 (50%)
 Frame = +1

Query: 238 VGCDSASGRVTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQN 417
           +G  ++   +T L L    ++   P   L+GL +L +L LG+N + NIS     L G   
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAP---LSGLTKLTELKLGANQISNIS----PLAGLTA 318

Query: 418 LTTLILTKN 444
           LT L L +N
Sbjct: 319 LTNLELNEN 327

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>INLA_LISMF (Q723K6) Internalin A precursor|
          Length = 800

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 23/69 (33%), Positives = 35/69 (50%)
 Frame = +1

Query: 238 VGCDSASGRVTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQN 417
           +G  ++   +T L L    ++   P   L+GL +L +L LG+N + NIS     L G   
Sbjct: 266 IGTLASLTNLTDLDLANNQISNLAP---LSGLTKLTELKLGANQISNIS----PLAGLTA 318

Query: 418 LTTLILTKN 444
           LT L L +N
Sbjct: 319 LTNLELNEN 327

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>CHAO_DROME (P12024) Chaoptin precursor (Photoreceptor cell-specific membrane|
           protein)
          Length = 1315

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 21/46 (45%), Positives = 24/46 (52%)
 Frame = +1

Query: 319 SLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKNFGGE 456
           S +GL  LE LDL  NNL  I   + V  G   LT L+LT N   E
Sbjct: 195 SFSGLLILETLDLSGNNLFEIDPNVFV-DGMPRLTRLLLTDNILSE 239

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>NETR_MOUSE (O08762) Neurotrypsin precursor (EC 3.4.21.-) (Motopsin)|
           (Brain-specific serine protease 3) (BSSP-3)
          Length = 761

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -3

Query: 287 LGRRSAVTR-PLAESHPTPSQLQHA--VPNHVSRRRTPPTMRFP 165
           + R   V+R PL   HP+P + QHA  +P   S RR P T RFP
Sbjct: 18  VARADPVSRSPLHRPHPSPPRSQHAHYLP---SSRRPPRTPRFP 58

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>THAP7_MOUSE (Q8VCZ3) THAP domain-containing protein 7|
          Length = 309

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 308 MGPVRPRLGRRSAVTRPLAESHPTPSQLQHAVPNHVSRRRTPP 180
           +GP+  +       T+P  E HP+P + Q A P+    R  PP
Sbjct: 179 LGPLGAQADEAGCSTQPSPEQHPSPLEPQPASPSAYMLRLPPP 221

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>DNMT1_MOUSE (P13864) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)|
           (DNA methyltransferase MmuI) (DNA MTase MmuI) (MCMT)
           (M.MmuI) (Met-1)
          Length = 1620

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
 Frame = +3

Query: 135 RRPSRAAELCGEPHCRRCPPPGHVVWYRMLQLGGRGM*LR---QRPCDSAAPPQARPHGA 305
           RR     E+C +P C +C          M++ GG G   +   +R C + A  +A     
Sbjct: 653 RRRCGVCEVCQQPECGKCK-----ACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDDEE 707

Query: 306 HPRDLPCRPCTARGSRPWLQQFTKHLRGTYRVAWVSEPHHVDSHQEFW 449
              D+   P   +     L Q  K  +   R++W+ +P  ++ ++ ++
Sbjct: 708 ADDDVSEMPSPKK-----LHQGKKKKQNKDRISWLGQPMKIEENRTYY 750

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>UXAA_BACSU (O34673) Altronate hydrolase (EC 4.2.1.7) (Altronic acid hydratase)|
          Length = 497

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +1

Query: 304 PIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILT 438
           P PG    G++ LED  LG      IS V  VL+  + L T  LT
Sbjct: 344 PSPGNKAGGISTLEDKSLGCTQKAGISPVTDVLKYGEVLKTKGLT 388

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>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2)
          Length = 330

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 22/60 (36%), Positives = 32/60 (53%)
 Frame = +1

Query: 265 VTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKN 444
           +T LRL    LTGP+P   L+ L  LE +DL  N+L     + + L   + L  L L++N
Sbjct: 121 LTFLRLSWTNLTGPVP-EFLSQLKNLEYIDLSFNDLS--GSIPSSLSSLRKLEYLELSRN 177

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>PEP1A_STRCO (Q9L1K2) Putative glucanohydrolase pep1A (EC 3.2.1.-)|
          Length = 675

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -2

Query: 366 VGAKVEILEPCKAGKGGPWDGPREAAPGEAQRCHTAAGGVT 244
           VGA V + +P   G+ GPW   RE APG  +   T   G T
Sbjct: 59  VGANVVLRDP--RGRPGPWTPMRELAPGTDRWGATVTAGET 97

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>RS5_DEIRA (Q9RSL1) 30S ribosomal protein S5|
          Length = 196

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
 Frame = +1

Query: 298 TGPIPGT------SLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKNFGGEE 459
           TG I GT       LAG+  +   +LGS N  N++    V  G +NL T    +N  G E
Sbjct: 109 TGVIAGTVPRSIAELAGITNMLSKELGSRNKVNVA--YAVFDGFKNLRTAKQVRNLRGTE 166

Query: 460 L 462
           +
Sbjct: 167 V 167

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>FA5_BOVIN (Q28107) Coagulation factor V precursor (Activated protein C|
           cofactor) [Contains: Coagulation factor V heavy chain;
           Coagulation factor V light chain]
          Length = 2211

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -3

Query: 116 CASDKRNAKKTTRSSMKHLAMG--FIEVEGVIW 24
           CA   RN KK TR   +H+     FI  E VIW
Sbjct: 329 CAKKTRNPKKLTRDQRRHIKRWEYFIAAEEVIW 361

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>VASN_HUMAN (Q6EMK4) Vasorin precursor (Protein Slit-like 2)|
          Length = 673

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 23/63 (36%), Positives = 30/63 (47%)
 Frame = +1

Query: 256 SGRVTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLIL 435
           +  V ALRL   GL     G   + L  L DLD+  N L+ +     V+RG + LT L L
Sbjct: 191 TANVEALRLAGLGLQQLDEGL-FSRLRNLHDLDVSDNQLERVP---PVIRGLRGLTRLRL 246

Query: 436 TKN 444
             N
Sbjct: 247 AGN 249



 Score = 28.5 bits (62), Expect = 9.9
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +1

Query: 265 VTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVL 402
           +T LRL        +    LAGLA L++LD+ + +LQ + G L+ L
Sbjct: 241 LTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGL 286

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>TLR3_HUMAN (O15455) Toll-like receptor 3 precursor (CD283 antigen)|
          Length = 904

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = +1

Query: 322 LAGLARLEDLDLGSNNL------QNISGVLTVLRGCQNLTTLILTKNFGGEELP 465
           L GL +LE LDL  NNL       N  G +  L+G  +L  L L  N G +E+P
Sbjct: 526 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESN-GFDEIP 578

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>EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1013

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 6/94 (6%)
 Frame = +3

Query: 93  GVSLVRCASDFVPPRRPSR---AAELCGEPHCRRCPPPGHVVWYRMLQLGGRGM*LRQRP 263
           G SLV      V    P       +  G P    C   G   W  M+ +GG       +P
Sbjct: 246 GASLVAAVGTCVAHAEPEEDGVGGQAGGSPPRLHCNGEGR--W--MVAVGGCRCQPGHQP 301

Query: 264 CDSAAPPQARPHGAH---PRDLPCRPCTARGSRP 356
                  QA P G++   P ++PC PC AR   P
Sbjct: 302 ARGDKLCQACPEGSYKALPGNVPCSPCPARSHSP 335

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>EAR2_MOUSE (P43136) Orphan nuclear receptor EAR-2 (V-erbA-related protein|
           EAR-2)
          Length = 390

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = +2

Query: 203 RGLVPHAATGRAWDVTPPAAV*QRCASPGAASRGPSQGPPLPAL 334
           RG +PHA  G       PAA    C+ PGA    P  GPP+  L
Sbjct: 129 RGRIPHALPG-------PAA----CSPPGATGVEPFTGPPVSEL 161

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>GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precursor|
          Length = 476

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +1

Query: 193 LRDTWFGTACCNWEGVGCDSASGRVTALRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNL 372
           L DTW G+  C+WE + C S+   V    +   G    +P +       +  LD G+   
Sbjct: 60  LGDTWTGSDFCSWEHIICYSSGVGVWMHNVDYTGTLPEMPASVDYKDVMILALDFGAMG- 118

Query: 373 QNISGVL 393
           Q +SG L
Sbjct: 119 QGLSGTL 125

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>ALS_HUMAN (P35858) Insulin-like growth factor-binding protein complex acid|
           labile chain precursor (ALS)
          Length = 605

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 24/57 (42%), Positives = 31/57 (54%)
 Frame = +1

Query: 274 LRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKN 444
           L L   GL G I   SL GLA L +LDL SN L ++   L   +G   L  L+L++N
Sbjct: 415 LFLKDNGLVG-IEEQSLWGLAELLELDLTSNQLTHLPHRL--FQGLGKLEYLLLSRN 468

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>TM55B_XENLA (Q5XKA6) Transmembrane protein 55B (EC 3.1.3.-) (Type I|
           phosphatidylinositol 4,5-bisphosphate 4-phosphatase)
           (PtdIns-4,5-P2 4-Ptase I)
          Length = 281

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
 Frame = +2

Query: 164 RGTSLSEVSSSGTRGLV--PHAAT-GRAWDVTPPAAV*QRCASPGAASRGPSQGPPLPAL 334
           R   LS++   G  G    P A + G A    PP         PG AS  P   P  PA 
Sbjct: 6   RSPLLSDLGDGGGMGAAMGPGAPSPGSALPTAPPYG------GPGPASNKPQGFPEFPAA 59

Query: 335 HGSRISTLAPTIY 373
           HGS I+   P  Y
Sbjct: 60  HGSVITGEDPPPY 72

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>LAMB3_HUMAN (Q13751) Laminin beta-3 chain precursor (Laminin 5 beta 3) (Laminin|
           B1k chain) (Kalinin B1 chain)
          Length = 1172

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/25 (64%), Positives = 16/25 (64%)
 Frame = +1

Query: 232 EGVGCDSASGRVTALRLPRRGLTGP 306
           EG GCD ASGR     L R GLTGP
Sbjct: 542 EGPGCDKASGRC----LCRPGLTGP 562

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>LAP4_MOUSE (Q80U72) LAP4 protein (Scribble homolog protein)|
          Length = 1612

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = +1

Query: 286 RRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKN 444
           R  L   +P  SL+ L +LE LDLG N+L+ +   L  L    NL  L L +N
Sbjct: 159 RENLLKSLPA-SLSFLVKLEQLDLGGNDLEVLPDTLGAL---PNLRELWLDRN 207

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>DTX2_HUMAN (Q86UW9) Protein deltex-2 (Deltex-2) (Deltex2) (hDTX2)|
          Length = 622

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 22/73 (30%), Positives = 30/73 (41%)
 Frame = +2

Query: 188 SSSGTRGLVPHAATGRAWDVTPPAAV*QRCASPGAASRGPSQGPPLPALHGSRISTLAPT 367
           S SG R   P   T  AW   PP+   Q       +  GP   PP  +  G+ +S   P+
Sbjct: 251 SLSGARS-APRLNTTNAWGAAPPSLGSQPLYRSSLSHLGPQHLPPGSSTSGA-VSASLPS 308

Query: 368 IYKTSQGYLPCCV 406
              +S G +P  V
Sbjct: 309 GPSSSPGSVPATV 321

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>ACH10_HUMAN (Q9GZZ6) Neuronal acetylcholine receptor protein, alpha-10 subunit|
           precursor (Nicotinic acetylcholine receptor subunit
           alpha 10) (NACHR alpha 10)
          Length = 450

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
 Frame = +3

Query: 162 CGEPHCRRCPPPGHVVWYRMLQLG--GRGM*LRQR--PCDSAAPPQARPH------GAHP 311
           CG P  R  P      W R L LG   RG+ +R+R  PC  + PP+  P       GA P
Sbjct: 325 CG-PSVRPVP-----AWARALLLGHLARGLCVRERGEPCGQSRPPELSPSPQSPEGGAGP 378

Query: 312 RDLPCRPCTARGSRPWLQQFTKHLRGTYRVAWVSEPHHVD 431
              PC        +  L      +  T+R    ++  H D
Sbjct: 379 PAGPCHEPRCLCRQEALLHHVATIANTFRSHRAAQRCHED 418

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>LRC21_MOUSE (Q8K099) Leucine-rich repeat-containing protein 21 precursor|
           (Photoreceptor-associated LRR superfamily protein)
           (Retina-specific protein PAL)
          Length = 618

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = +1

Query: 274 LRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKN 444
           LRL R  +   +PG +   L+RLE L L  N L  +S ++  LRG + L  L L  N
Sbjct: 58  LRLERTAIRR-VPGETFRPLSRLEQLWLPYNALSELSALM--LRGLRRLRELRLPGN 111

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>LAP4_HUMAN (Q14160) LAP4 protein (Scribble homolog protein) (hScrib)|
          Length = 1630

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = +1

Query: 286 RRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKN 444
           R  L   +P  SL+ L +LE LDLG N+L+ +   L  L    NL  L L +N
Sbjct: 159 RENLLKSLPA-SLSFLVKLEQLDLGGNDLEVLPDTLGAL---PNLRELWLDRN 207

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>DISC_DROME (P23792) Protein disconnected|
          Length = 568

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 20/64 (31%), Positives = 24/64 (37%)
 Frame = -1

Query: 268 SHGRWRSHIPRPPSCSMRYQTTCPGGGHLRQ*GSPQSSAAREGRRGGTKSLAHRTRETPR 89
           SH    SH+P  P  +     + PGG      GS   SAA  G   G+     R    P 
Sbjct: 21  SHQHVHSHLPSHPQPNAASPASSPGGSS----GSGSGSAAGSGTGSGSSLKPRRWGSPPI 76

Query: 88  RLQG 77
            L G
Sbjct: 77  NLAG 80

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>OST2_HUMAN (Q9Y278) Heparan sulfate glucosamine 3-O-sulfotransferase 2 (EC|
           2.8.2.29) (Heparan sulfate D-glucosaminyl
           3-O-sulfotransferase 2) (Heparan sulfate
           3-O-sulfotransferase 2) (h3-OST-2)
          Length = 367

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 20/72 (27%), Positives = 27/72 (37%)
 Frame = +3

Query: 81  CSLLGVSLVRCASDFVPPRRPSRAAELCGEPHCRRCPPPGHVVWYRMLQLGGRGM*LRQR 260
           C+ L  S + C  D    R       L G P C R P             GG+ +  + R
Sbjct: 30  CTYLCYSFLCCCDDLGRSR-------LLGAPRCLRGP-----------SAGGQKLLQKSR 71

Query: 261 PCDSAAPPQARP 296
           PCD + P  + P
Sbjct: 72  PCDPSGPTPSEP 83

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>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)|
            (CDP)
          Length = 1505

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 22/69 (31%), Positives = 29/69 (42%)
 Frame = +2

Query: 215  PHAATGRAWDVTPPAAV*QRCASPGAASRGPSQGPPLPALHGSRISTLAPTIYKTSQGYL 394
            P +AT  A    P  A     A+PG     PS  PP P+   S  +   P+  ++  G L
Sbjct: 1405 PASATATAAPAAPEDAATSAAAAPGEGPAAPSSAPP-PSNSSSSSAPRRPSSLQSLFG-L 1462

Query: 395  PCCVGVRTS 421
            P   G R S
Sbjct: 1463 PEAAGARDS 1471

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>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 7/95 (7%)
 Frame = +3

Query: 126  VPPRRPSRAAELCGEPH-------CRRCPPPGHVVWYRMLQLGGRGM*LRQRPCDSAAPP 284
            +P RR  R +E   E H        +  PPP   V             L Q P    APP
Sbjct: 1100 IPKRRRQRGSETGSETHESDLAPSDKEAPPPKEGV-------------LAQVPL---APP 1143

Query: 285  QARPHGAHPRDLPCRPCTARGSRPWLQQFTKHLRG 389
            Q    GA P   P R  TARG R +  +     RG
Sbjct: 1144 QP---GAPPSPAPARFSTARGGRVFTPRGVPSRRG 1175

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>RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1887

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 15/56 (26%), Positives = 22/56 (39%)
 Frame = +2

Query: 278  ASPGAASRGPSQGPPLPALHGSRISTLAPTIYKTSQGYLPCCVGVRTSPR*FSPRI 445
            ASP  +   P+  P  P     R ++  P     S GY P   G   +   +SP +
Sbjct: 1594 ASPNYSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTV 1649

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>TOLIP_HUMAN (Q9H0E2) Toll-interacting protein|
          Length = 274

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 11/62 (17%)
 Frame = -2

Query: 252 GVTSHALPVAACGTKPRVPEED---------TSDNEVPRKVL--QRVKVVGVARSRLRIG 106
           G+   ALP AA   +PR  EED           D EV R VL  QR        S L++G
Sbjct: 212 GMVPVALPPAAVNAQPRCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMG 271

Query: 105 QE 100
           +E
Sbjct: 272 EE 273

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>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated|
           protein 62) (SAP 62) (SF3a66)
          Length = 475

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = +2

Query: 245 VTPPAAV*QRCASPGAASRGPSQGPPLPALHGSRISTLAPTIYKTSQGYLPCCVGVRTSP 424
           V PPA       S G   + P   PP PA+H       AP ++  + G  P   GV   P
Sbjct: 368 VHPPAPGVHPPPSAGVHPQAPGVHPPAPAVHPQ-----APGVHPPAPGIHPQAPGVHPQP 422

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>PROP1_BOVIN (Q8MJI9) Homeobox protein prophet of Pit-1 (PROP-1)|
           (Pituitary-specific homeodomain factor)
          Length = 226

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 20/59 (33%), Positives = 24/59 (40%)
 Frame = -1

Query: 373 VNCWSQGRDPRAVQGRQGRSLXXXXXXXXXXXXALSHGRWRSHIPRPPSCSMRYQTTCP 197
           +  W Q R  RA Q +Q RSL             LS   +   +P PPSC   Y T  P
Sbjct: 113 IQVWFQNR--RAKQRKQERSLLQPLAH-------LSPATFSGFLPEPPSCPYSYPTPPP 162

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>IF2G_SPIVO (O36041) Eukaryotic translation initiation factor 2 gamma subunit|
           (eIF-2-gamma) (Fragment)
          Length = 210

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/80 (21%), Positives = 40/80 (50%)
 Frame = -2

Query: 288 PGEAQRCHTAAGGVTSHALPVAACGTKPRVPEEDTSDNEVPRKVLQRVKVVGVARSRLRI 109
           PG      T   GV +    +     + R P+E T ++    +   + K++ +A++++ +
Sbjct: 87  PGHHDYMTTMLSGVAAMDGTLLLISAEQRCPQEQTREHFQAIQATGQKKII-IAQNKIDL 145

Query: 108 GQEKRQEDYKEQHEAFGHGI 49
             E++ ++  ++ +AF HGI
Sbjct: 146 VTEQQAQNNYQEIQAFVHGI 165

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>UXAA_ECOLI (P42604) Altronate hydrolase (EC 4.2.1.7) (Altronic acid hydratase)|
          Length = 495

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +1

Query: 304 PIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTT 426
           P PG    G+  LED  LG       S V+ VLR  + L T
Sbjct: 343 PSPGNKAGGITTLEDKSLGCTQKAGSSVVVDVLRYGERLKT 383

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>PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase (EC 3.1.2.-)|
           (Protein X) (ORF-1)
          Length = 361

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +2

Query: 122 LRATPTTFTRCRTLRGTSLSEVSSSGTRGLVPHAATGRAWDVTPPAAV*QRC-ASPGAAS 298
           LRA PT+ T  R+ R  + +    S +R   P     R            RC   PG  +
Sbjct: 35  LRADPTSGTTRRSARRATCARRPRSSSRRTEPAGCADR-----------HRCPVRPGPRT 83

Query: 299 RGPSQGPP 322
           RGP+  PP
Sbjct: 84  RGPADPPP 91

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>LAP1_CAEEL (O61967) Protein lap1 (Protein lethal-413)|
          Length = 699

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +1

Query: 259 GRVTALRL--PRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNIS---GVLTVLR 405
           G +T LR+   R  L   IP  S+  L +LE+LDLG N L+ +    G LT LR
Sbjct: 148 GSLTNLRVLEARDNLLRTIP-LSIVELRKLEELDLGQNELEALPAEIGKLTSLR 200

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>EAR2_RAT (O09017) Orphan nuclear receptor EAR-2 (V-erbA-related protein|
           EAR-2) (Ovalbumin upstream promoter gamma nuclear
           receptor) (COUPg)
          Length = 390

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 18/43 (41%), Positives = 21/43 (48%)
 Frame = +2

Query: 206 GLVPHAATGRAWDVTPPAAV*QRCASPGAASRGPSQGPPLPAL 334
           G +PHA  G       PAA    C+ PGAA   P  GPP+  L
Sbjct: 130 GPIPHALPG-------PAA----CSPPGAAGVEPFAGPPVSEL 161

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>ALS_PAPHA (O02833) Insulin-like growth factor-binding protein complex acid|
           labile chain precursor (ALS)
          Length = 605

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 24/57 (42%), Positives = 30/57 (52%)
 Frame = +1

Query: 274 LRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKN 444
           L L   GL G I   SL GLA L +LDL SN L ++   L   +G   L  L+L+ N
Sbjct: 415 LFLKDNGLVG-IEEQSLWGLAELLELDLTSNQLTHLPHQL--FQGLGKLEYLLLSHN 468

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>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2158

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 7/95 (7%)
 Frame = +3

Query: 126  VPPRRPSRAAELCGEPH-------CRRCPPPGHVVWYRMLQLGGRGM*LRQRPCDSAAPP 284
            +P RR  R +E   E H        +  PPP   V             L Q P    APP
Sbjct: 1095 IPKRRRQRGSETGSETHESDLAPSDKEAPPPKEGV-------------LGQVPL---APP 1138

Query: 285  QARPHGAHPRDLPCRPCTARGSRPWLQQFTKHLRG 389
            Q    GA P   P R  TARG R +  +     RG
Sbjct: 1139 QP---GAPPSPAPARFSTARGGRVFTPRGVPSRRG 1170

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>ATF7_MOUSE (Q8R0S1) Cyclic AMP-dependent transcription factor ATF-7|
           (Activating transcription factor 7) (Transcription
           factor ATF-A)
          Length = 413

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 314 PGMGPVRPRLGRRSAVTRPLAESHPTPSQLQ-HAVPNHVSRRRTPPTMRFP 165
           P   P  P L  +   T+P+  S PTP+ ++  ++P H+      PT+  P
Sbjct: 122 PASSPCSPPLKEKEVTTKPVVISTPTPTIVRPGSLPLHLGYDPLHPTLPSP 172

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>RDH1_BOVIN (Q27979) 11-cis retinol dehydrogenase (EC 1.1.1.105) (11-cis RDH)|
           (P32)
          Length = 318

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1

Query: 241 GCDSASGRVTALRLPRRG 294
           GCDS  GR+ ALRL +RG
Sbjct: 35  GCDSGFGRLLALRLDQRG 52

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>SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-associated|
           protein 114) (SAP 114) (SF3a120)
          Length = 793

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = +2

Query: 203 RGLVPHAATGRAWDVTPPAAV*QRCASPGAASRGPSQGPPLPALHGSRISTLAPTIYKTS 382
           +GLVP   T      + P  + Q+   P +A+  PS  PP+ ++   R  T+ P +  T 
Sbjct: 533 KGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSV--PRPPTMPPPVRTTV 590

Query: 383 QGYLP 397
              +P
Sbjct: 591 VSAVP 595

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>PCDB3_PANTR (Q5DRD1) Protocadherin beta 3 precursor (PCDH-beta3)|
          Length = 796

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
 Frame = +1

Query: 295 LTGPIPGTSLAGLARLEDLDLGSNNLQNIS-------GVLT-VLRGCQNLTTLILTKNFG 450
           L   +PGT +  L   EDLD+G N+LQN +        VLT   R  +    L+L K   
Sbjct: 143 LESTLPGTVIP-LGNAEDLDVGRNSLQNYTITPNSHFHVLTRSRRDGRKYPELVLDKALD 201

Query: 451 GEELP 465
            EE P
Sbjct: 202 REEQP 206

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>PCDB3_HUMAN (Q9Y5E6) Protocadherin beta 3 precursor (PCDH-beta3)|
          Length = 796

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
 Frame = +1

Query: 295 LTGPIPGTSLAGLARLEDLDLGSNNLQNIS-------GVLT-VLRGCQNLTTLILTKNFG 450
           L   +PGT +  L   EDLD+G N+LQN +        VLT   R  +    L+L K   
Sbjct: 143 LESTLPGTVIP-LGNAEDLDVGRNSLQNYTITPNSHFHVLTRSRRDGRKYPELVLDKALD 201

Query: 451 GEELP 465
            EE P
Sbjct: 202 REEQP 206

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>FOXM1_HUMAN (Q08050) Forkhead box protein M1 (Forkhead-related protein FKHL16)|
           (Hepatocyte nuclear factor 3 forkhead homolog 11)
           (HNF-3/fork-head homolog 11) (HFH-11) (Winged helix
           factor from INS-1 cells) (M-phase phosphoprotein 2)
           (MPM-2 reactive phosp
          Length = 763

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +2

Query: 185 VSSSGTRGLVPHAATGRAWDVTPPAAV*QRCASPGAASRGPSQGPPLP 328
           +SS+ ++ ++P   T  +W +TPPA V     SP   S+G S   PLP
Sbjct: 608 ISSTPSKSVLPR--TPESWRLTPPAKVGGLDFSPVQTSQGASD--PLP 651

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>LRC21_RAT (Q9JMH2) Leucine-rich repeat-containing protein 21 precursor|
           (Photoreceptor-associated LRR superfamily protein)
           (Retina-specific protein PAL)
          Length = 617

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = +1

Query: 274 LRLPRRGLTGPIPGTSLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKN 444
           LRL R  +   +PG +   L+RLE L L  N L  +S ++  LRG + L  L L  N
Sbjct: 58  LRLERTAIRR-VPGETFRPLSRLEQLWLPYNALSELSTLM--LRGLRRLRELRLPGN 111

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>GLNE_RHIME (Q92R86) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
            ([Glutamate--ammonia-ligase] adenylyltransferase)
            (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 986

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +1

Query: 271  ALRLPRRGLTGPIPGT-SLAGLARLEDLDLGSNNLQNISGVLTVLRGCQNLTTLILTKNF 447
            AL  P RG+T P  GT +L  L  L    + +N+L   +  L +      L  L +  +F
Sbjct: 880  ALVAPARGVTSPPAGTHTLEALKALGAGMMNANDLDTAAEALVLFTELSQLVRLCIDGDF 939

Query: 448  GGEELP 465
              +E P
Sbjct: 940  DPKEAP 945

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>RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1853

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 21/70 (30%), Positives = 29/70 (41%)
 Frame = +2

Query: 230  GRAWDVTPPAAV*QRCASPGAASRGPSQGPPLPALHGSRISTLAPTIYKTSQGYLPCCVG 409
            G +  V  PA+      SP  +   PS  P  PA HG   S ++P+   TS  Y P    
Sbjct: 1572 GMSPGVYSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQ--SPVSPSYSPTSPSYSPTSPS 1629

Query: 410  VRTSPR*FSP 439
               +   +SP
Sbjct: 1630 YSPTSPSYSP 1639

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>YPMF_ECOLI (P07116) Hypothetical mobilization operon protein F|
          Length = 147

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 24  PNHSLHLNESHGQMLHAAPCSLLGVSLV 107
           P  ++HL ++HG   H APC +L + L+
Sbjct: 47  PLAAVHLGQNHGPHQHLAPCFVLALLLL 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,426,830
Number of Sequences: 219361
Number of extensions: 2100988
Number of successful extensions: 7805
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 7098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7782
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result