Clone Information

BLAST Search Result

Clone Name	bart53b03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0	170	1e-42
2	RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0	160	1e-39
3	RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0	145	5e-35
4	RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A	143	2e-34
5	RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0	140	2e-33
6	RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B	139	2e-33
7	RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C	138	6e-33
8	RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induc...	138	6e-33
9	RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)	84	1e-16
10	RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurin...	82	4e-16
11	RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)	82	5e-16
12	RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)	82	7e-16
13	RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)	81	9e-16
14	RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)	81	9e-16
15	RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)	81	9e-16
16	RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0	80	2e-15
17	RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Frag...	80	2e-15
18	RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)	79	3e-15
19	RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0	79	4e-15
20	RLA0_PIG (Q29214) 60S acidic ribosomal protein P0 (L10E) (Fragment)	79	4e-15
21	RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)	78	1e-14
22	RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0	75	6e-14
23	RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)	72	4e-13
24	RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0	72	5e-13
25	RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0	64	2e-10
26	RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0	62	7e-10
27	RLA0_DICDI (P22685) 60S acidic ribosomal protein P0	60	2e-09
28	RLA0_LEICH (P39096) 60S acidic ribosomal protein P0	57	2e-08
29	RLA0_METTL (O52705) Acidic ribosomal protein P0 homolog (L10E)	54	2e-07
30	RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0	53	3e-07
31	RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0	51	1e-06
32	RLA0_METVA (P15826) Acidic ribosomal protein P0 homolog (L10E) (...	47	2e-05
33	RLA0_METVO (Q9Y8J3) Acidic ribosomal protein P0 homolog (L10E) (...	46	3e-05
34	RLA0_HALSA (P13553) Acidic ribosomal protein P0 homolog (L10E)	46	3e-05
35	RLA0_HALVO (P41198) Acidic ribosomal protein P0 homolog (L10E)	44	2e-04
36	RLA0_METTH (O27717) Acidic ribosomal protein P0 homolog (L10E)	44	2e-04
37	RLA0_METKA (Q8TX50) Acidic ribosomal protein P0 homolog (L10E)	44	2e-04
38	MRT4_YEAST (P33201) mRNA turnover protein 4	42	6e-04
39	RLA0_SULSO (P96039) Acidic ribosomal protein P0 homolog (L10E) (...	41	0.001
40	RLA0_METJA (P54049) Acidic ribosomal protein P0 homolog (L10E)	41	0.001
41	MRT4_CANGA (Q6FJ04) mRNA turnover protein 4 homolog	41	0.001
42	MRT4_NEUCR (Q7S302) mRNA turnover protein 4 homolog	39	0.004
43	RLA0_SULTO (Q971J2) Acidic ribosomal protein P0 homolog (L10E)	39	0.005
44	RLA0_HALMA (P15825) 50S ribosomal protein L10E (Ribosomal protei...	39	0.006
45	RLA0_PYRKO (Q5JH36) Acidic ribosomal protein P0 homolog (L10E)	38	0.008
46	RLA0_ARCFU (O28781) Acidic ribosomal protein P0 homolog (L10E)	37	0.014
47	RL10_SYNSC (Q3AGT1) 50S ribosomal protein L10	37	0.025
48	RLA0_SULAC (P35023) Acidic ribosomal protein P0 homolog (L10E) (...	34	0.12
49	MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog	34	0.12
50	RL10_TROWT (Q83FL0) 50S ribosomal protein L10	31	1.0
51	RL10_TROW8 (Q83HB1) 50S ribosomal protein L10	31	1.0
52	RL10_MYCTU (P66044) 50S ribosomal protein L10	30	1.8
53	RL10_MYCBO (P66045) 50S ribosomal protein L10	30	1.8
54	SYNE2_HUMAN (Q8WXH0) Nesprin-2 (Nuclear envelope spectrin repeat...	30	1.8
55	RL10_SYNJB (Q2JM49) 50S ribosomal protein L10	30	1.8
56	RL10_NOCFA (Q5YPC7) 50S ribosomal protein L10	30	2.3
57	IF2_PORGI (Q7MXE4) Translation initiation factor IF-2	30	3.0
58	BRCA2_RAT (O35923) Breast cancer type 2 susceptibility protein h...	29	5.1
59	PSPC_HUMAN (P11686) Pulmonary surfactant-associated protein C pr...	29	5.1
60	Y037_MYCPN (P75077) Hypothetical protein MPN037 (B01_orf147)	28	6.7
61	RL10_CORGL (Q8NT29) 50S ribosomal protein L10	28	6.7
62	RL10_COREF (Q8FSA1) 50S ribosomal protein L10	28	6.7
63	RL10_THEFY (Q47LI3) 50S ribosomal protein L10	28	6.7
64	SYA_MYCGE (P47534) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	28	6.7
65	NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)	28	6.7
66	MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12...	28	8.8
67	RF1_SYNEL (Q8DMG9) Peptide chain release factor 1 (RF-1)	28	8.8
68	RL10_BACSU (P42923) 50S ribosomal protein L10 (BL5) (Cold acclim...	28	8.8

>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0|
          Length = 318

 Score =  170 bits (431), Expect = 1e-42
 Identities = 85/95 (89%), Positives = 91/95 (95%)
 Frame = +1

Query: 139 AIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTL 318
           AIKRTKAEKK+AYD+KLCQLL+EYTKVLIAVADNVGS QLQEIRKGLRGDSIVLMGKNTL
Sbjct: 1   AIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTL 60

Query: 319 IRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           IRRCIKVH++ TGNK+FLEL  LLVGNVGLIFTKG
Sbjct: 61  IRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKG 95

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>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0|
          Length = 318

 Score =  160 bits (404), Expect = 1e-39
 Identities = 80/95 (84%), Positives = 89/95 (93%)
 Frame = +1

Query: 139 AIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTL 318
           AIKRTKAEKKIAYD+KLC LL+EYTKVLIA+ADNVGSKQLQ+IR+GLRGDS+VLMGKNTL
Sbjct: 1   AIKRTKAEKKIAYDKKLCSLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTL 60

Query: 319 IRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           IRRCIKV++EKTGN  F  L +LLVGNVGLIFTKG
Sbjct: 61  IRRCIKVYAEKTGNHTFDPLMDLLVGNVGLIFTKG 95

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>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0|
          Length = 322

 Score =  145 bits (365), Expect = 5e-35
 Identities = 69/96 (71%), Positives = 84/96 (87%)
 Frame = +1

Query: 136 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 315
           MA K TKAEKKI YD KLCQLL+EYT++L+  ADNVGSKQLQ IR+GLRGDS+VLMGKNT
Sbjct: 1   MAPKATKAEKKIVYDGKLCQLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNT 60

Query: 316 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           +++R +++H+EKTGN+ FL L  LL+GNVGLIFTKG
Sbjct: 61  MMKRSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKG 96

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>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A|
          Length = 317

 Score =  143 bits (360), Expect = 2e-34
 Identities = 67/96 (69%), Positives = 82/96 (85%)
 Frame = +1

Query: 136 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 315
           MA+K TKAEKKI YD KLCQLL EY+++L+  ADNVGS QLQ IRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 316 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           +++R +++H++KTGN+ FL L  LL GNVGLIFTKG
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKG 96

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>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0|
          Length = 320

 Score =  140 bits (352), Expect = 2e-33
 Identities = 67/96 (69%), Positives = 82/96 (85%)
 Frame = +1

Query: 136 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 315
           MA K+TKAEKKIAYD KLC L+EEY ++L+  +DNVGS QLQ IRKGLRGDS+VLMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 316 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           +++R +++H+EKTGN  +L L  LLVGNVGLIFTKG
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKG 96

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>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B|
          Length = 320

 Score =  139 bits (351), Expect = 2e-33
 Identities = 66/94 (70%), Positives = 79/94 (84%)
 Frame = +1

Query: 142 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 321
           +K TKAEKKIAYD KLCQL++EYT++L+  ADNVGS QLQ IRKGLRGDS+VLMGKNT++
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 322 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           +R +++HSE TGN   L L  LL GNVGLIFTKG
Sbjct: 62  KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKG 95

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>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C|
          Length = 323

 Score =  138 bits (347), Expect = 6e-33
 Identities = 65/94 (69%), Positives = 79/94 (84%)
 Frame = +1

Query: 142 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 321
           +K TKAEKKIAYD KLCQL++EYT++L+  ADNVGS QLQ IRKGLRGDS+VLMGKNT++
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 322 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           +R +++HSE +GN   L L  LL GNVGLIFTKG
Sbjct: 62  KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKG 95

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>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa|
           protein)
          Length = 321

 Score =  138 bits (347), Expect = 6e-33
 Identities = 68/96 (70%), Positives = 82/96 (85%)
 Frame = +1

Query: 136 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 315
           MA+K TKAEKKIAYDQKLCQLL+EY++VLIA ADNVGS QLQ IR GLRGDSIVLMGKNT
Sbjct: 1   MAVKPTKAEKKIAYDQKLCQLLDEYSQVLIASADNVGSNQLQAIRIGLRGDSIVLMGKNT 60

Query: 316 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           +++R I++H+E TGN++   +  L + NVGLIFTKG
Sbjct: 61  MMKRSIRLHAENTGNENLRNVEQLFLPNVGLIFTKG 96

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>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)|
          Length = 317

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 45/94 (47%), Positives = 59/94 (62%)
 Frame = +1

Query: 142 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 321
           ++  KA  K  Y  K+ +L +EY K  I  ADNVGSKQ+Q IR  LRG  +VLMGKNT++
Sbjct: 2   VRENKAAWKAQYFLKVVELFDEYPKCFIVGADNVGSKQMQNIRTSLRGLGVVLMGKNTMM 61

Query: 322 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           R+ I+ H E   N    +L   + GNVG +FTKG
Sbjct: 62  RKAIRGHLE--NNAQLEKLLPHIKGNVGFVFTKG 93

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>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or|
           apyrimidinic site) lyase) (EC 4.2.99.18)
           (Apurinic-apyrimidinic endonuclease)
          Length = 317

 Score = 82.4 bits (202), Expect = 4e-16
 Identities = 44/94 (46%), Positives = 60/94 (63%)
 Frame = +1

Query: 142 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 321
           ++  KA  K  Y  K+ +L +E+ K  I  ADNVGSKQ+Q IR  LRG ++VLMGKNT++
Sbjct: 2   VRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMM 61

Query: 322 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           R+ I+ H E   N    +L   + GNVG +FTKG
Sbjct: 62  RKAIRGHLE--NNPQLEKLLPHIKGNVGFVFTKG 93

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>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)|
          Length = 315

 Score = 82.0 bits (201), Expect = 5e-16
 Identities = 44/92 (47%), Positives = 60/92 (65%)
 Frame = +1

Query: 145 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 324
           +  +A  K  Y  K+ QLL++Y K  I  ADNVGSKQ+Q+IR  LRG ++VLMGKNT++R
Sbjct: 3   REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62

Query: 325 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 420
           + I+ H E   N    +L   + GNVG +FTK
Sbjct: 63  KAIRGHLE--NNSALEKLLPHIKGNVGFVFTK 92

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>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)|
          Length = 316

 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 43/92 (46%), Positives = 60/92 (65%)
 Frame = +1

Query: 145 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 324
           +  +A  K  Y  K+ QLL++Y K  +  ADNVGSKQ+Q+IR  LRG ++VLMGKNT++R
Sbjct: 3   REDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62

Query: 325 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 420
           + I+ H E   N    +L   + GNVG +FTK
Sbjct: 63  KAIRGHLE--NNPALEKLLPHIRGNVGFVFTK 92

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>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 81.3 bits (199), Expect = 9e-16
 Identities = 44/92 (47%), Positives = 60/92 (65%)
 Frame = +1

Query: 145 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 324
           +  +A  K  Y  K+ QLL++Y K  I  ADNVGSKQ+Q+IR  LRG ++VLMGKNT++R
Sbjct: 3   REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62

Query: 325 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 420
           + I+ H E   N    +L   + GNVG +FTK
Sbjct: 63  KAIRGHLE--NNPALEKLLPHIRGNVGFVFTK 92

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>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 81.3 bits (199), Expect = 9e-16
 Identities = 44/92 (47%), Positives = 60/92 (65%)
 Frame = +1

Query: 145 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 324
           +  +A  K  Y  K+ QLL++Y K  I  ADNVGSKQ+Q+IR  LRG ++VLMGKNT++R
Sbjct: 3   REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62

Query: 325 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 420
           + I+ H E   N    +L   + GNVG +FTK
Sbjct: 63  KAIRGHLE--NNPALEKLLPHIRGNVGFVFTK 92

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>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 81.3 bits (199), Expect = 9e-16
 Identities = 44/92 (47%), Positives = 60/92 (65%)
 Frame = +1

Query: 145 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 324
           +  +A  K  Y  K+ QLL++Y K  I  ADNVGSKQ+Q+IR  LRG ++VLMGKNT++R
Sbjct: 3   REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62

Query: 325 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 420
           + I+ H E   N    +L   + GNVG +FTK
Sbjct: 63  KAIRGHLE--NNPALEKLLPHIRGNVGFVFTK 92

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>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0|
          Length = 311

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 42/93 (45%), Positives = 60/93 (64%)
 Frame = +1

Query: 142 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 321
           ++  ++  K  Y  KL +L EEY K L+   DNVGSKQ+QEIR+ +RG + +LMGKNT+I
Sbjct: 1   VREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMI 60

Query: 322 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 420
           R+ ++ H  K  N    +L   +V NVG +FTK
Sbjct: 61  RKALRGHLGK--NPSLEKLLPHIVENVGFVFTK 91

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>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)|
          Length = 309

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 43/85 (50%), Positives = 57/85 (67%)
 Frame = +1

Query: 166 KIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 345
           K  Y  K+ QLL++Y K  I  ADNVGSKQ+Q+IR  LRG ++VLMGKNT++R+ I+ H 
Sbjct: 1   KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 60

Query: 346 EKTGNKDFLELSNLLVGNVGLIFTK 420
           E   N    +L   + GNVG +FTK
Sbjct: 61  E--NNPALEKLLPHIRGNVGFVFTK 83

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>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)|
          Length = 317

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 45/92 (48%), Positives = 58/92 (63%)
 Frame = +1

Query: 145 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 324
           +  +A  K  Y  K+ QLL +Y K  I  ADNVGSKQ+Q IR  LRG +IVLMGKNT++R
Sbjct: 3   REDRATWKSNYFLKIIQLLNDYPKCFIVGADNVGSKQMQTIRLSLRGKAIVLMGKNTMMR 62

Query: 325 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 420
           + I+ H E   N    +L   + GNVG +FTK
Sbjct: 63  KAIRGHLE--NNPALEKLLPHIRGNVGFVFTK 92

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>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0|
          Length = 313

 Score = 79.0 bits (193), Expect = 4e-15
 Identities = 40/90 (44%), Positives = 56/90 (62%)
 Frame = +1

Query: 154 KAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 333
           K+  K  Y  KL  LLE+Y  + I   DNV S+Q+ EIR+ LRG+++VLMGKNT++RR +
Sbjct: 4   KSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRAL 63

Query: 334 KVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           K     T   ++  L   + GNVG +FT G
Sbjct: 64  KTFVADT--PEYERLLPFVKGNVGFVFTNG 91

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>RLA0_PIG (Q29214) 60S acidic ribosomal protein P0 (L10E) (Fragment)|
          Length = 93

 Score = 79.0 bits (193), Expect = 4e-15
 Identities = 43/92 (46%), Positives = 59/92 (64%)
 Frame = +1

Query: 145 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 324
           +  +A  K  Y  K+ QLL++Y K  I  ADNVGSKQ+Q+IR  LRG ++VLMGKNT++R
Sbjct: 3   REDRAPWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMXLRGKAVVLMGKNTMMR 62

Query: 325 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 420
           + I+ H E   N    +L   + GNVG +F K
Sbjct: 63  KAIRGHLE--NNPALGKLLPQIRGNVGFVFXK 92

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>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)|
          Length = 319

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 43/92 (46%), Positives = 58/92 (63%)
 Frame = +1

Query: 145 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 324
           +  +A  K  Y  K+ QLL+++ K  I  ADNVGSKQ+Q IR  LRG ++VLMGKNT++R
Sbjct: 3   REDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMR 62

Query: 325 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 420
           + I+ H E   N     L   + GNVG +FTK
Sbjct: 63  KAIRGHLE--NNPALERLLPHIRGNVGFVFTK 92

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>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0|
          Length = 314

 Score = 75.1 bits (183), Expect = 6e-14
 Identities = 39/90 (43%), Positives = 53/90 (58%)
 Frame = +1

Query: 154 KAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 333
           K+  K  Y  KL  LLEEY  + I   DNV S+Q+ EIR+ LR   +VLMGKNT++RR +
Sbjct: 4   KSANKAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRAL 63

Query: 334 KVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           K       + ++  L   + GNVG +FT G
Sbjct: 64  KTF--LVDSPEYERLLPFVKGNVGFVFTNG 91

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>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)|
          Length = 312

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 39/86 (45%), Positives = 54/86 (62%)
 Frame = +1

Query: 160 EKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 339
           EKK  Y  KL + LEEY  + +   DNV S+Q+ E+RK LRG ++VLMGKNT++RR I+ 
Sbjct: 6   EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIR- 64

Query: 340 HSEKTGNKDFLELSNLLVGNVGLIFT 417
               +   DF +L   + G VG +FT
Sbjct: 65  -GFLSDLPDFEKLLPFVKGYVGFVFT 89

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>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0|
          Length = 316

 Score = 72.0 bits (175), Expect = 5e-13
 Identities = 38/92 (41%), Positives = 58/92 (63%)
 Frame = +1

Query: 145 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 324
           K +K +KK  Y +KL  L+++Y+K+LI   DNVGS Q+  +RK LRG + +LMGKNT IR
Sbjct: 3   KLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIR 62

Query: 325 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 420
             +K + +     +  +L  L+  N+G +F K
Sbjct: 63  TALKKNLQAVPQIE--KLLPLVKLNMGFVFCK 92

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>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0|
          Length = 312

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
 Frame = +1

Query: 136 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 315
           MAI +   E K  Y +KL  L E+Y  + +   DNV S+Q+  +RK LRG + ++MGKNT
Sbjct: 1   MAISK---ESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNT 57

Query: 316 LIRRCIKVHSEKTGNKDFLELSNLLV---GNVGLIFT 417
           +IRR ++         D  EL  LL    GNVG +FT
Sbjct: 58  MIRRAMRGII-----NDMPELERLLPVVRGNVGFVFT 89

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>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0|
          Length = 314

 Score = 61.6 bits (148), Expect = 7e-10
 Identities = 38/88 (43%), Positives = 52/88 (59%)
 Frame = +1

Query: 157 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 336
           A K+  Y  +L QL+ E+ +VL+  AD+VGSKQL  IR  LRG + VLMGKNT IR  ++
Sbjct: 6   AAKRREYFPRLLQLVLEHPRVLVVSADHVGSKQLAGIRVALRGQATVLMGKNTKIRTALR 65

Query: 337 VHSEKTGNKDFLELSNLLVGNVGLIFTK 420
              ++        L  L+  NVG IF +
Sbjct: 66  QQLQQ--QPQLQALLPLVRLNVGFIFCR 91

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>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0|
          Length = 305

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 35/88 (39%), Positives = 53/88 (60%)
 Frame = +1

Query: 157 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 336
           +++K  + +K  +L   Y K+++A AD VGS QLQ+IRK +RG   VLMGK T+IR+ I+
Sbjct: 6   SKRKKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIR 65

Query: 337 VHSEKTGNKDFLELSNLLVGNVGLIFTK 420
             ++     D   L+  L  N  +IF K
Sbjct: 66  DLADSKPELD--ALNTYLKQNTCIIFCK 91

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>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0|
          Length = 322

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
 Frame = +1

Query: 166 KIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 345
           K  Y+++L   L +Y+ VL    DNV S+Q+ ++R+G RG +  +MGK TL  + ++  +
Sbjct: 8   KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRGCRGKAEFIMGKKTLQAKIVEKRA 67

Query: 346 -------EKTGNKDFLELSNLLVGNVGLIFT 417
                  E     D  E  NLL GN GLIFT
Sbjct: 68  QAKDASPEAKPFNDQCEEYNLLSGNTGLIFT 98

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>RLA0_METTL (O52705) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 338

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 32/84 (38%), Positives = 48/84 (57%)
 Frame = +1

Query: 166 KIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 345
           KI    KL +LL+    V +     V ++QLQEIR  +RG   + M +NTLI R IK  +
Sbjct: 14  KIEEVNKLKELLKNGQIVALVDMMEVPARQLQEIRDKIRGTMTLKMSRNTLIERAIKEVA 73

Query: 346 EKTGNKDFLELSNLLVGNVGLIFT 417
           E+TGN +F +L++ +     +I T
Sbjct: 74  EETGNPEFAKLADYIDKGAAIITT 97

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>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0|
          Length = 323

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
 Frame = +1

Query: 157 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 336
           +E K  Y+++    L +Y +VL  + DNV S+Q+ ++R+ LRG   ++MGK TL ++ ++
Sbjct: 5   SEAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVE 64

Query: 337 VHSEKTGNKDFLEL-------SNLLVGNVGLIFT 417
             +E      + +L         LL GN  LIFT
Sbjct: 65  RRAEDKKASAYDKLLYNTCIEKKLLCGNTALIFT 98

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>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0|
          Length = 323

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = +1

Query: 166 KIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 345
           K  Y+++L   L +Y+ VL    DNV S+Q+ ++ + LR  +  +MGK TL  + ++  +
Sbjct: 8   KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVGRALRAKAEFMMGKKTLQGKIVEKRA 67

Query: 346 -------EKTGNKDFLELSNLLVGNVGLIFT 417
                  E     D  E  NLL GN GLIFT
Sbjct: 68  QAKDASPEAKHFNDQCEEYNLLSGNTGLIFT 98

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>RLA0_METVA (P15826) Acidic ribosomal protein P0 homolog (L10E) (ML2)|
          Length = 336

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 27/85 (31%), Positives = 46/85 (54%)
 Frame = +1

Query: 166 KIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 345
           KI     L +LL+    + +     V + QLQEIR  +R    + M +NTLI+R ++  +
Sbjct: 14  KIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVEEVA 73

Query: 346 EKTGNKDFLELSNLLVGNVGLIFTK 420
           E+TGN +F +L + L     ++ T+
Sbjct: 74  EETGNPEFAKLVDYLDKGAAIVVTE 98

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>RLA0_METVO (Q9Y8J3) Acidic ribosomal protein P0 homolog (L10E) (Fragment)|
          Length = 297

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 29/88 (32%), Positives = 46/88 (52%)
 Frame = +1

Query: 157 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 336
           A  K+     L +LL+    + +     V S QLQEIR  +R    + M +NTL++R I+
Sbjct: 11  ASWKVDEVNSLKELLKSGNVIALIDMMEVPSVQLQEIRDTIRDSMTLKMSRNTLMKRAIE 70

Query: 337 VHSEKTGNKDFLELSNLLVGNVGLIFTK 420
             +E+TGN  F +L + +     LI T+
Sbjct: 71  EVAEETGNPSFTKLIDCMEKGAALIATE 98

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>RLA0_HALSA (P13553) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 352

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = +1

Query: 184 KLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNK 363
           +L  LLE Y  V +     + SKQLQ++R+GL G + + M +NTL+ R +    E+ G  
Sbjct: 22  ELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAG-- 75

Query: 364 DFLE-LSNLLVGNVGLIFT 417
           D L+ L+  + G VGL+ T
Sbjct: 76  DGLDTLTEYVEGEVGLVAT 94

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>RLA0_HALVO (P41198) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 350

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 26/78 (33%), Positives = 38/78 (48%)
 Frame = +1

Query: 184 KLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNK 363
           +L   +E Y  V +     + S+QLQ +R+ L G + V M +NTL+ R +        N 
Sbjct: 22  ELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRAL-----DEVND 76

Query: 364 DFLELSNLLVGNVGLIFT 417
            F EL   + G V LI T
Sbjct: 77  GFEELKEYIAGQVALIGT 94

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>RLA0_METTH (O27717) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 336

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 30/87 (34%), Positives = 48/87 (55%)
 Frame = +1

Query: 157 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 336
           AE K    Q+L  L++ Y  V IA   ++ ++QLQ++R+ LR  +++ M K TLI   ++
Sbjct: 5   AEWKKKEVQELHDLIKGYEVVGIANLADIPARQLQKMRQTLRDSALIRMSKKTLISLALE 64

Query: 337 VHSEKTGNKDFLELSNLLVGNVGLIFT 417
               +  N D   LS+ + G   LIFT
Sbjct: 65  KAGRELENVD--SLSDYMEGQPALIFT 89

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>RLA0_METKA (Q8TX50) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 357

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
 Frame = +1

Query: 133 PMAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLR-GDSIVLMGK 309
           P   +   AE K    ++L +L++EY  V +   + + + QLQEIR  LR  D+I+ M +
Sbjct: 10  PSGYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSR 69

Query: 310 NTLIRRCIKVHSEKTGNKDFLE-LSNLLVGNVGLIFT 417
           NTL+R  ++   EK   +  LE L + + G V  IFT
Sbjct: 70  NTLMRIALE---EKLDERPELEPLLDYIEGPVAFIFT 103

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>MRT4_YEAST (P33201) mRNA turnover protein 4|
          Length = 236

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 26/91 (28%), Positives = 49/91 (53%)
 Frame = +1

Query: 145 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 324
           K+ +  K+  +D+ + + L+ Y  V +   D+V +  LQEIR    G  ++ MGK  +++
Sbjct: 17  KKGRENKERIFDE-VREALDTYRYVWVLHLDDVRTPVLQEIRTSWAGSKLI-MGKRKVLQ 74

Query: 325 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFT 417
           + +    E+   ++  +LS L  G  GL+FT
Sbjct: 75  KALGEKREEEYKENLYQLSKLCSGVTGLLFT 105

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>RLA0_SULSO (P96039) Acidic ribosomal protein P0 homolog (L10E) (Ribosomal|
           protein L10)
          Length = 338

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
 Frame = +1

Query: 136 MAIKRTK-AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKN 312
           +A+K+ K A  K+   ++L +L++    +LI   +   + +L EIRK LRG + + + KN
Sbjct: 6   LALKQRKVASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKN 65

Query: 313 TLIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 420
           TL +      + K    D  +L   L G    IFTK
Sbjct: 66  TLFK-----IAAKNAGIDIEKLEQYLTGPNVFIFTK 96

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>RLA0_METJA (P54049) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 338

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
 Frame = +1

Query: 211 TKVLIAVAD--NVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKDFLELSN 384
           +K ++A+ D  +V + QLQEIR  +R    + M +NTLI R +K  +E+  N    EL+N
Sbjct: 26  SKPVVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKLAELAN 85

Query: 385 LLVGNVGLIFT 417
            +     ++ T
Sbjct: 86  YVERGAAILVT 96

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>MRT4_CANGA (Q6FJ04) mRNA turnover protein 4 homolog|
          Length = 239

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 25/91 (27%), Positives = 49/91 (53%)
 Frame = +1

Query: 145 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 324
           K+ +  K+  +D+ + + L+ Y  V +   D+V +  LQEIR+   G  + LMGK  ++ 
Sbjct: 17  KKGRENKERIFDE-VREALDTYKYVFVLQLDDVRTPVLQEIREAWVGSKL-LMGKRKVLE 74

Query: 325 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFT 417
           + +    E+   ++  +L+    G +GL+FT
Sbjct: 75  KALGTTREQEYKENLSKLTKYCSGVIGLLFT 105

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>MRT4_NEUCR (Q7S302) mRNA turnover protein 4 homolog|
          Length = 252

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 25/92 (27%), Positives = 42/92 (45%)
 Frame = +1

Query: 142 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 321
           + +   E+K    + + + +  Y    +   DN+ +  L+++RK L  D  +  GK  L 
Sbjct: 15  VTKKNREQKEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELN-DCRIFFGKTKLT 73

Query: 322 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFT 417
            R +    E        +LS  L G+VGLIFT
Sbjct: 74  ARALGTTPEDAQADGLDKLSKYLSGSVGLIFT 105

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>RLA0_SULTO (Q971J2) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 337

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 30/98 (30%), Positives = 48/98 (48%)
 Frame = +1

Query: 124 VAAPMAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLM 303
           + A +  +R  A+ KI   ++L Q L EY  ++IA  +   + +L +IRK +RG + + +
Sbjct: 3   IMAVITQERKIAKWKIEEVKELEQKLREYHTIIIANIEGFPADKLHDIRKKMRGMAEIKV 62

Query: 304 GKNTLIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFT 417
            KNTL        + K    D  +L   L G    IFT
Sbjct: 63  TKNTLFG-----IAAKNAGLDVSKLEPYLTGPNAFIFT 95

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>RLA0_HALMA (P15825) 50S ribosomal protein L10E (Ribosomal protein L10) (Acidic|
           ribosomal protein P0 homolog) (L10E) (HMal10)
          Length = 348

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 23/77 (29%), Positives = 42/77 (54%)
 Frame = +1

Query: 187 LCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKD 366
           + +++E Y  V +     + S+QLQ++R+ L G + + + +NTL+ R +       G +D
Sbjct: 23  IVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL--DDVDDGLED 80

Query: 367 FLELSNLLVGNVGLIFT 417
              L+  + G VGLI T
Sbjct: 81  ---LNGYITGQVGLIGT 94

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>RLA0_PYRKO (Q5JH36) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 340

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 21/88 (23%), Positives = 46/88 (52%)
 Frame = +1

Query: 157 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 336
           AE K    ++L  +++ Y  + +     V +  L ++R  LRG +++ + +NTLI   IK
Sbjct: 5   AEWKKKEVEELANIIKSYPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIK 64

Query: 337 VHSEKTGNKDFLELSNLLVGNVGLIFTK 420
             +++ G  +  +L + + G   ++ T+
Sbjct: 65  RAAQELGQPELEKLIDHIQGGAAILATE 92

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>RLA0_ARCFU (O28781) Acidic ribosomal protein P0 homolog (L10E)|
          Length = 339

 Score = 37.4 bits (85), Expect = 0.014
 Identities = 24/91 (26%), Positives = 49/91 (53%)
 Frame = +1

Query: 139 AIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTL 318
           A++ +  E K+   +++ +++     V I    NV + Q+Q+IR+  RG + + + KNTL
Sbjct: 3   AVRGSPPEYKVRAVEEIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTL 62

Query: 319 IRRCIKVHSEKTGNKDFLELSNLLVGNVGLI 411
           + R +    +  G  D+L+L + L   + +I
Sbjct: 63  LERAL----DALGG-DYLKLKDYLGDQIAII 88

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>RL10_SYNSC (Q3AGT1) 50S ribosomal protein L10|
          Length = 175

 Score = 36.6 bits (83), Expect = 0.025
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +1

Query: 184 KLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRG-DSIVLMGKNTLIRRCIKVHSEKTGN 360
           +L +LL +    L+     +  K++ ++R  LR  DS+  + KNTL+RR I       G+
Sbjct: 14  ELKELLADAELALVLDFKGLSIKEMSDLRDRLRASDSVCKVTKNTLMRRAI------DGD 67

Query: 361 KDFLELSNLLVGNVGLIFTKG 423
            ++  L +LL G    +  KG
Sbjct: 68  SNWASLDSLLTGTNAFVLVKG 88

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>RLA0_SULAC (P35023) Acidic ribosomal protein P0 homolog (L10E) (Ribosomal|
           protein L10)
          Length = 335

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
 Frame = +1

Query: 136 MAIKRTKAEKKIAYDQ--KLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGK 309
           +A+  TK   K   D+  +L + L+ +  ++IA  +   + +L EIRK LRG + + + K
Sbjct: 4   LAVTTTKKIAKWKVDEVAELTEKLKTHKTIIIANIEGFPADKLHEIRKKLRGKADIKVTK 63

Query: 310 NTLIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFT 417
           N L    +     K    D     + L G    IFT
Sbjct: 64  NNLFNIAL-----KNAGYDTKLFESYLTGPNAFIFT 94

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>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog|
          Length = 241

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 25/86 (29%), Positives = 44/86 (51%)
 Frame = +1

Query: 160 EKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 339
           E K A    + Q L+ +  + I    N+ +  L+ IR   +G S + MGK  ++ + +  
Sbjct: 21  EGKAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTKVMAKALGH 79

Query: 340 HSEKTGNKDFLELSNLLVGNVGLIFT 417
             E+   ++  +L+ LL G VGL+FT
Sbjct: 80  TPEEEHAENVSKLTKLLHGAVGLLFT 105

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>RL10_TROWT (Q83FL0) 50S ribosomal protein L10|
          Length = 166

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 19/63 (30%), Positives = 33/63 (52%)
 Frame = +1

Query: 187 LCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKD 366
           L  +L +   ++      + + QL+ +R  LRGD+  L+ KNTL R    + +++ G  D
Sbjct: 10  LVGVLSDAQAIVFTEYRGLSAAQLRALRILLRGDASYLIAKNTLAR----IAAQQVGFND 65

Query: 367 FLE 375
           F E
Sbjct: 66  FAE 68

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>RL10_TROW8 (Q83HB1) 50S ribosomal protein L10|
          Length = 166

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 19/63 (30%), Positives = 33/63 (52%)
 Frame = +1

Query: 187 LCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKD 366
           L  +L +   ++      + + QL+ +R  LRGD+  L+ KNTL R    + +++ G  D
Sbjct: 10  LVGVLSDAQAIVFTEYRGLSAAQLRALRILLRGDASYLIAKNTLAR----IAAQQVGFND 65

Query: 367 FLE 375
           F E
Sbjct: 66  FAE 68

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>RL10_MYCTU (P66044) 50S ribosomal protein L10|
          Length = 178

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 26/90 (28%), Positives = 39/90 (43%)
 Frame = +1

Query: 154 KAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 333
           +A+K  A      Q  +E T  LI     +    L E+R+ L G +   + KNTLI+R  
Sbjct: 3   RADKATAVADIAAQF-KESTATLITEYRGLTVANLAELRRSLTGSATYAVAKNTLIKRA- 60

Query: 334 KVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
              + + G +    L  L VG   + F  G
Sbjct: 61  ---ASEAGIEG---LDELFVGPTAIAFVTG 84

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>RL10_MYCBO (P66045) 50S ribosomal protein L10|
          Length = 178

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 26/90 (28%), Positives = 39/90 (43%)
 Frame = +1

Query: 154 KAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 333
           +A+K  A      Q  +E T  LI     +    L E+R+ L G +   + KNTLI+R  
Sbjct: 3   RADKATAVADIAAQF-KESTATLITEYRGLTVANLAELRRSLTGSATYAVAKNTLIKRA- 60

Query: 334 KVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
              + + G +    L  L VG   + F  G
Sbjct: 61  ---ASEAGIEG---LDELFVGPTAIAFVTG 84

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>SYNE2_HUMAN (Q8WXH0) Nesprin-2 (Nuclear envelope spectrin repeat protein 2)|
            (Syne-2) (Synaptic nuclear envelope protein 2) (Nucleus
            and actin connecting element protein) (NUANCE protein)
          Length = 6885

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
 Frame = +1

Query: 166  KIAYDQKLCQLLEEYTKVLIAVADNVGSKQL---QEIRKGLRGDSIVLMGKNTLIRRCI- 333
            ++ +  K C+   E T  L   AD++   +L   QE+ KG++ +   L  + T I+ CI 
Sbjct: 2937 EVEHKIKFCRQFHEKTSALQEEADSIQRNELLLNQEVNKGVKEEIYNLKDRLTAIKCCIL 2996

Query: 334  ------KVHSEKTGNKDFLELSNL 387
                  KV      N DF +L  L
Sbjct: 2997 QVLKLKKVFDYIGLNWDFSQLDQL 3020

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>RL10_SYNJB (Q2JM49) 50S ribosomal protein L10|
          Length = 187

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = +1

Query: 163 KKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLR-GDSIVLMGKNTLIRRCIKV 339
           KK     K+  LL+    VL+     +   ++ ++R  LR  DS+ ++ KNTL+RR I  
Sbjct: 8   KKAEIVDKVRSLLQASQMVLVIDYKGLTVAEMDQLRAELRKSDSVCMVVKNTLMRRAIAD 67

Query: 340 HSEKTGNKDFL 372
                G   FL
Sbjct: 68  QKAWAGIIPFL 78

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>RL10_NOCFA (Q5YPC7) 50S ribosomal protein L10|
          Length = 176

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 23/90 (25%), Positives = 43/90 (47%)
 Frame = +1

Query: 154 KAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 333
           KAEK  A  + + +  +  T  ++     +   +L E+R+ L  ++   + KNTL++R  
Sbjct: 3   KAEKVTAVAE-IAEQFKSSTATVVTEYRGLSVGKLTELRRALGAEATYSVAKNTLVKRA- 60

Query: 334 KVHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
              + + G +    L +L VG   + F KG
Sbjct: 61  ---AAEAGVEG---LDDLFVGPTAITFIKG 84

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>IF2_PORGI (Q7MXE4) Translation initiation factor IF-2|
          Length = 979

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 10/25 (40%), Positives = 20/25 (80%)
 Frame = -3

Query: 77  ERRVDEDQAREKSEADGLRRRRRFN 3
           +++  ED+ RE+++ADG ++R+R N
Sbjct: 257 KKKTKEDRQREQNDADGKKKRKRIN 281

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>BRCA2_RAT (O35923) Breast cancer type 2 susceptibility protein homolog (Fanconi|
            anemia group D1 protein homolog)
          Length = 3343

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +1

Query: 241  VGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKDFLELSNLLV 393
            VG   L + +K LR  S  L  +NT+  +C+K H+E        E S +++
Sbjct: 1655 VGESSLSKGKKWLREQSDKLGTRNTIEIQCVKEHTEDFAGNALYEHSLVII 1705

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>PSPC_HUMAN (P11686) Pulmonary surfactant-associated protein C precursor (SP-C)|
           (SP5) (Pulmonary surfactant-associated proteolipid
           SPL(Val))
          Length = 197

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +3

Query: 174 VRPEALPVARGVHQGAHRRRRQCRLQAAPGDPQGSPR*LHRAHGQEHPDPP 326
           + PE++P    +++  H  + +C LQA P  P      L +A G++    P
Sbjct: 126 IAPESIPSLEALNRKVHNFQMECSLQAKPAVPTSK---LGQAEGRDAGSAP 173

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>Y037_MYCPN (P75077) Hypothetical protein MPN037 (B01_orf147)|
          Length = 147

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = -3

Query: 275 PLRISWSCLEPTLSATAM---STLVYSSSNWQSFWSYAIFFSALVLLIAIGAATGWTEAL 105
           P  I+ S    TLS+T     + L  S S + S WS+   +S   L +     TG T  L
Sbjct: 28  PWTITTSVSRSTLSSTTWILWTWLFNSVSIFVSRWSFDFLYSLNSLRVTYSVFTGITGLL 87

Query: 104 TLDC 93
           +L+C
Sbjct: 88  SLNC 91

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>RL10_CORGL (Q8NT29) 50S ribosomal protein L10|
          Length = 171

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 26/89 (29%), Positives = 40/89 (44%)
 Frame = +1

Query: 157 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 336
           AE K  + +    +L EY  + +A        Q  E+RK L  D    + KNTL    +K
Sbjct: 11  AELKARFAETDTVVLTEYRGLTVA--------QTTELRKALGFDVQYSVAKNTL----VK 58

Query: 337 VHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           + + + G +    L +LL G   + F KG
Sbjct: 59  IAANEAGVEG---LDDLLTGPTAVAFIKG 84

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>RL10_COREF (Q8FSA1) 50S ribosomal protein L10|
          Length = 171

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 25/89 (28%), Positives = 41/89 (46%)
 Frame = +1

Query: 157 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 336
           AE K  + +    +L EY  + +A        Q  E+R+ L  D    + KNTL    +K
Sbjct: 11  AELKAQFAETDSIVLTEYRGLTVA--------QTTELRRALGDDVQYSVAKNTL----VK 58

Query: 337 VHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           + +++ G +    L +LL G   + F KG
Sbjct: 59  IAAQEAGVEG---LDDLLTGPTAVAFIKG 84

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>RL10_THEFY (Q47LI3) 50S ribosomal protein L10|
          Length = 175

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 26/89 (29%), Positives = 42/89 (47%)
 Frame = +1

Query: 157 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 336
           AE K  +      +L EY  + +A        QL E+R+ L  ++   + KNTL     K
Sbjct: 11  AELKEEFQTSSGAVLTEYRGLTVA--------QLTELRRSLGQNARFRVAKNTL----TK 58

Query: 337 VHSEKTGNKDFLELSNLLVGNVGLIFTKG 423
           + +++ G  D  E+ +LL G   + F KG
Sbjct: 59  IAAKEAGVTD-SEVLDLLKGPSAIAFVKG 86

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>SYA_MYCGE (P47534) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 900

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +1

Query: 172 AYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 324
           A +QKL QL  E  KVL  +  ++   +L+E+++ L  D  +L  K T +R
Sbjct: 716 AENQKLIQLKSELEKVLSLIDSSIFKVELKELQQRL--DKFILPEKITQLR 764

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>NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)|
          Length = 1176

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 229 VADNVG-SKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKDF 369
           V D+VG + +L+E  KGLRG   +  G +   R C      + GNKDF
Sbjct: 727 VGDSVGMAVRLEERYKGLRGPHKIKGGVSGCTREC-----AEAGNKDF 769

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>MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12A (Myosin|
           phosphatase-targeting subunit 1) (Myosin phosphatase
           target subunit 1) (Protein phosphatase myosin-binding
           subunit)
          Length = 1030

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 24/90 (26%), Positives = 42/90 (46%)
 Frame = -3

Query: 278 RPLRISWSCLEPTLSATAMSTLVYSSSNWQSFWSYAIFFSALVLLIAIGAATGWTEALTL 99
           RP+  S S   P+ S + MS+ +Y+SS      S             +G  + ++  +T 
Sbjct: 770 RPVSTS-SSTTPSSSLSTMSSSLYASSQLNRPNSL------------VGITSAYSRGITK 816

Query: 98  DC*ICVGERRVDEDQAREKSEADGLRRRRR 9
           +     GE+R +E +  +KS+   +R RRR
Sbjct: 817 EN-EREGEKREEEKEGEDKSQPKSIRERRR 845

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>RF1_SYNEL (Q8DMG9) Peptide chain release factor 1 (RF-1)|
          Length = 364

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 115 VHPVAAPMAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQ-EIRKGLRGD 288
           +H  AA     R  AE++IA+       LEE  K+L+   D    K +  EIR G  GD
Sbjct: 69  LHKEAANEPELRQMAEEEIAHLSHRIAQLEERLKILLLPRDPNDEKNIMLEIRAGAGGD 127

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>RL10_BACSU (P42923) 50S ribosomal protein L10 (BL5) (Cold acclimatization|
           protein) (CAP) (Vegetative protein 300) (VEG300)
          Length = 165

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +1

Query: 160 EKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSI-VLMGKNTLIRRCIK 336
           E K    +++   L+E    +I     +   ++ E+RK LR  ++   + KNT+ RR ++
Sbjct: 5   ETKKVVVEEIASKLKESKSTIIVDYRGLNVSEVTELRKQLREANVESKVYKNTMTRRAVE 64

Query: 337 VHSEKTGNKDFLELSNLL 390
             +E  G  DFL   N +
Sbjct: 65  -QAELNGLNDFLTGPNAI 81


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,845,536
Number of Sequences: 219361
Number of extensions: 730471
Number of successful extensions: 2911
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 2827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2896
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result