ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart53b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
2dbj|AK060623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
3dbj|AB021666.2| Oryza sativa (japonica cultivar-group) OsFEN-1a ... 391 e-105
4ref|XM_475800.1| Oryza sativa (japonica cultivar-group), predic... 383 e-103
5gb|AY104316.1| Zea mays PCO066214 mRNA sequence 341 1e-90
6gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome... 178 1e-41
7gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome... 178 1e-41
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
9dbj|AP004520.1| Lotus japonicus genomic DNA, chromosome 5, clone... 88 3e-14
10gb|BT013937.1| Lycopersicon esculentum clone 132960F, mRNA sequence 76 1e-10
11ref|NM_180546.2| Arabidopsis thaliana 5'-3' exonuclease/ DNA bin... 58 3e-05
12ref|XM_470320.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
13dbj|AB088391.1| Oryza sativa (japonica cultivar-group) OsFEN-1b ... 58 3e-05
14dbj|AK069540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
15dbj|AK062149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
16dbj|AB080084.1| Oryza sativa (japonica cultivar-group) OsFEN-1b ... 58 3e-05
17gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 54 4e-04
18ref|XM_842886.1| Leishmania major strain Friedlin flap endonucle... 54 4e-04
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 0.002
20gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genom... 52 0.002
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
22gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 50 0.006
23ref|XM_787809.1| PREDICTED: Strongylocentrotus purpuratus simila... 48 0.024
24emb|CR732933.2|CNS0GSGA Tetraodon nigroviridis full-length cDNA 46 0.095
25emb|CR730648.2|CNS0GQPP Tetraodon nigroviridis full-length cDNA 46 0.095
26emb|CR730305.2|CNS0GQG6 Tetraodon nigroviridis full-length cDNA 46 0.095
27emb|CR725479.2|CNS0GMQ5 Tetraodon nigroviridis full-length cDNA 46 0.095
28emb|CR700163.2|CNS0G373 Tetraodon nigroviridis full-length cDNA 46 0.095
29emb|CR699050.2|CNS0G2C6 Tetraodon nigroviridis full-length cDNA 46 0.095
30emb|CR698211.2|CNS0G1OV Tetraodon nigroviridis full-length cDNA 46 0.095
31emb|CR696087.2|CNS0G01V Tetraodon nigroviridis full-length cDNA 46 0.095
32emb|CR680197.2|CNS0FNSH Tetraodon nigroviridis full-length cDNA 46 0.095
33emb|CR659616.2|CNS0F7XI Tetraodon nigroviridis full-length cDNA 46 0.095
34gb|DQ127589.1| Emiliania huxleyi virus 163 clone mike12.seq part... 46 0.095
35emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 46 0.095
36gb|BC010203.1| Mus musculus flap structure specific endonuclease... 44 0.38
37ref|XM_712411.1| Candida albicans SC5314 hypothetical protein (C... 44 0.38
38ref|XM_712317.1| Candida albicans SC5314 hypothetical protein (C... 44 0.38
39gb|BC027295.1| Mus musculus flap structure specific endonuclease... 44 0.38
40gb|AC132148.3| Mus musculus BAC clone RP23-6N21 from chromosome ... 44 0.38
41ref|NM_007999.3| Mus musculus flap structure specific endonuclea... 44 0.38
42gb|AY014962.1| Mus musculus flap endonuclease-1 (Fen1) gene, com... 44 0.38
43gb|AC026761.17| Mus musculus Strain 129S6/SvEvTac chromosome 19 ... 44 0.38
44dbj|AK153889.1| Mus musculus 2 days neonate thymus thymic cells ... 44 0.38
45dbj|AK161047.1| Mus musculus 0 day neonate skin cDNA, RIKEN full... 44 0.38
46dbj|AK168731.1| Mus musculus 17 days embryo heart cDNA, RIKEN fu... 44 0.38
47dbj|AK166948.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 44 0.38
48dbj|AB191468.1| Mus musculus 1810006K21Rik, Fen1 genes for hypot... 44 0.38
49dbj|AK042942.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 44 0.38
50dbj|AK046256.1| Mus musculus adult male corpora quadrigemina cDN... 44 0.38
51dbj|AK076977.1| Mus musculus adult male testis cDNA, RIKEN full-... 44 0.38
52dbj|AK078778.1| Mus musculus 15 days embryo male testis cDNA, RI... 44 0.38
53dbj|AK029975.1| Mus musculus adult male testis cDNA, RIKEN full-... 44 0.38
54dbj|AK187493.1| Mus musculus cDNA, clone:Y0G0142A22, strand:plus... 44 0.38
55gb|L26320.1|MUSFEN1X Mouse flap endonuclease-1 (FEN-1) mRNA, com... 44 0.38
56gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.5
57gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.5
58ref|XM_712410.1| Candida albicans SC5314 hypothetical protein (C... 42 1.5
59ref|XM_712316.1| Candida albicans SC5314 hypothetical protein (C... 42 1.5
60emb|CR698159.2|CNS0G1NF Tetraodon nigroviridis full-length cDNA 42 1.5
61emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.5
62emb|AJ719700.1| Gallus gallus mRNA for hypothetical protein, clo... 42 1.5
63emb|BX294662.13| Zebrafish DNA sequence from clone DKEYP-117E6 i... 42 1.5
64gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.5
65dbj|AB058602.1| Gallus gallus FEN1 gene for FEN-1 nuclease, comp... 42 1.5
66ref|XM_483640.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.9
67gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, c... 40 5.9
68gb|AC118211.10| Mus musculus chromosome 8, clone RP24-223O5, com... 40 5.9
69ref|XM_661985.1| Cryptosporidium hominis TU502 flap endonuclease... 40 5.9
70gb|AC148406.12| Medicago truncatula clone mth2-46e9, complete se... 40 5.9
71emb|BX571952.13| Zebrafish DNA sequence from clone DKEY-35E8 in ... 40 5.9
72gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 5.9
73gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 5.9
74gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.9
75dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
76gb|AE004710.1| Pseudomonas aeruginosa PAO1, section 271 of 529 o... 40 5.9
77gb|AC131011.5| Homo sapiens X BAC RP13-314C10 (Roswell Park Canc... 40 5.9
78gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 5.9
79gb|AC121952.4| Mus musculus BAC clone RP24-217M18 from chromosom... 40 5.9
80dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.9
81dbj|AK109374.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
82dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
83dbj|AK073704.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
84gb|AF027770.1|AF027770 Mycobacterium smegmatis FxbA (fxbA) gene,... 40 5.9
85gb|AF034152.1|AF034152 Mycobacterium smegmatis exochelin gene cl... 40 5.9
86gb|U40369.1|HSU40369 Human spermidine/spermine N1-acetyltransfer... 40 5.9
87gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence,... 40 5.9 
>dbj|AK103819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147G19, full
           insert sequence
          Length = 1481

 Score =  391 bits (197), Expect = e-105
 Identities = 266/289 (92%)
 Strand = Plus / Plus

                                                                       
Query: 88  gcgagatgggagtcaagggtttgacgaagctgctggcggacaacgcgcccaagtcgatga 147
           ||||||||||  |||||||||||||||||||  |||||||||| ||||||||| ||||||
Sbjct: 73  gcgagatgggcatcaagggtttgacgaagcttttggcggacaatgcgcccaaggcgatga 132

                                                                       
Query: 148 gggagcagaagttcgagagctacttcggccgccgcatcgccgtcgacgccagcatgagca 207
            |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 133 aggagcagaagttcgagagctacttcggccggcgcattgccgtcgacgccagcatgagca 192

                                                                       
Query: 208 tctaccagttccttattgtagttggaaggacagggatggaaacccttacaaacgaagccg 267
           ||||||||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||
Sbjct: 193 tctaccagttcctcattgtagttggaaggacggggatggaaaccctcacgaacgaggccg 252

                                                                       
Query: 268 gtgatgtcaccagtcatttgcaaggcatgttcagccggacaataaggttgctcgaggcag 327
           |||| |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||
Sbjct: 253 gtgaagtcaccagtcatttgcaaggtatgttcaaccggacaataaggttgctggaggcag 312

                                                            
Query: 328 gaattaaaccagtatatgtttttgatggcaagcctcctgaaatgaagaa 376
           |||| || ||||||||||||||||| ||||||||||||||  |||||||
Sbjct: 313 gaatcaagccagtatatgtttttgacggcaagcctcctgatctgaagaa 361
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>dbj|AK060623.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-F07, full
           insert sequence
          Length = 1406

 Score =  391 bits (197), Expect = e-105
 Identities = 266/289 (92%)
 Strand = Plus / Plus

                                                                       
Query: 88  gcgagatgggagtcaagggtttgacgaagctgctggcggacaacgcgcccaagtcgatga 147
           ||||||||||  |||||||||||||||||||  |||||||||| ||||||||| ||||||
Sbjct: 110 gcgagatgggcatcaagggtttgacgaagcttttggcggacaatgcgcccaaggcgatga 169

                                                                       
Query: 148 gggagcagaagttcgagagctacttcggccgccgcatcgccgtcgacgccagcatgagca 207
            |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 170 aggagcagaagttcgagagctacttcggccggcgcattgccgtcgacgccagcatgagca 229

                                                                       
Query: 208 tctaccagttccttattgtagttggaaggacagggatggaaacccttacaaacgaagccg 267
           ||||||||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||
Sbjct: 230 tctaccagttcctcattgtagttggaaggacggggatggaaaccctcacgaacgaggccg 289

                                                                       
Query: 268 gtgatgtcaccagtcatttgcaaggcatgttcagccggacaataaggttgctcgaggcag 327
           |||| |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||
Sbjct: 290 gtgaagtcaccagtcatttgcaaggtatgttcaaccggacaataaggttgctggaggcag 349

                                                            
Query: 328 gaattaaaccagtatatgtttttgatggcaagcctcctgaaatgaagaa 376
           |||| || ||||||||||||||||| ||||||||||||||  |||||||
Sbjct: 350 gaatcaagccagtatatgtttttgacggcaagcctcctgatctgaagaa 398
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>dbj|AB021666.2| Oryza sativa (japonica cultivar-group) OsFEN-1a mRNA for FEN-1,
           complete cds
          Length = 1354

 Score =  391 bits (197), Expect = e-105
 Identities = 266/289 (92%)
 Strand = Plus / Plus

                                                                       
Query: 88  gcgagatgggagtcaagggtttgacgaagctgctggcggacaacgcgcccaagtcgatga 147
           ||||||||||  |||||||||||||||||||  |||||||||| ||||||||| ||||||
Sbjct: 62  gcgagatgggcatcaagggtttgacgaagcttttggcggacaatgcgcccaaggcgatga 121

                                                                       
Query: 148 gggagcagaagttcgagagctacttcggccgccgcatcgccgtcgacgccagcatgagca 207
            |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 122 aggagcagaagttcgagagctacttcggccggcgcattgccgtcgacgccagcatgagca 181

                                                                       
Query: 208 tctaccagttccttattgtagttggaaggacagggatggaaacccttacaaacgaagccg 267
           ||||||||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||
Sbjct: 182 tctaccagttcctcattgtagttggaaggacggggatggaaaccctcacgaacgaggccg 241

                                                                       
Query: 268 gtgatgtcaccagtcatttgcaaggcatgttcagccggacaataaggttgctcgaggcag 327
           |||| |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||
Sbjct: 242 gtgaagtcaccagtcatttgcaaggtatgttcaaccggacaataaggttgctggaggcag 301

                                                            
Query: 328 gaattaaaccagtatatgtttttgatggcaagcctcctgaaatgaagaa 376
           |||| || ||||||||||||||||| ||||||||||||||  |||||||
Sbjct: 302 gaatcaagccagtatatgtttttgacggcaagcctcctgatctgaagaa 350
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>ref|XM_475800.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1143

 Score =  383 bits (193), Expect = e-103
 Identities = 256/277 (92%)
 Strand = Plus / Plus

                                                                       
Query: 100 tcaagggtttgacgaagctgctggcggacaacgcgcccaagtcgatgagggagcagaagt 159
           |||||||||||||||||||  |||||||||| ||||||||| |||||| |||||||||||
Sbjct: 8   tcaagggtttgacgaagcttttggcggacaatgcgcccaaggcgatgaaggagcagaagt 67

                                                                       
Query: 160 tcgagagctacttcggccgccgcatcgccgtcgacgccagcatgagcatctaccagttcc 219
           ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 68  tcgagagctacttcggccggcgcattgccgtcgacgccagcatgagcatctaccagttcc 127

                                                                       
Query: 220 ttattgtagttggaaggacagggatggaaacccttacaaacgaagccggtgatgtcacca 279
           | ||||||||||||||||| |||||||||||||| || ||||| |||||||| |||||||
Sbjct: 128 tcattgtagttggaaggacggggatggaaaccctcacgaacgaggccggtgaagtcacca 187

                                                                       
Query: 280 gtcatttgcaaggcatgttcagccggacaataaggttgctcgaggcaggaattaaaccag 339
           ||||||||||||| ||||||| |||||||||||||||||| ||||||||||| || ||||
Sbjct: 188 gtcatttgcaaggtatgttcaaccggacaataaggttgctggaggcaggaatcaagccag 247

                                                
Query: 340 tatatgtttttgatggcaagcctcctgaaatgaagaa 376
           ||||||||||||| ||||||||||||||  |||||||
Sbjct: 248 tatatgtttttgacggcaagcctcctgatctgaagaa 284
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>gb|AY104316.1| Zea mays PCO066214 mRNA sequence
          Length = 1552

 Score =  341 bits (172), Expect = 1e-90
 Identities = 259/288 (89%)
 Strand = Plus / Plus

                                                                       
Query: 89  cgagatgggagtcaagggtttgacgaagctgctggcggacaacgcgcccaagtcgatgag 148
           |||||||||  |||||||||||||||| |||||||||||||| ||||||||| |||||| 
Sbjct: 86  cgagatgggcatcaagggtttgacgaaactgctggcggacaatgcgcccaaggcgatgaa 145

                                                                       
Query: 149 ggagcagaagttcgagagctacttcggccgccgcatcgccgtcgacgccagcatgagcat 208
           |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||
Sbjct: 146 ggagcagaagttcgagagctacttcggccgcaaaatcgccgtcgacgccagcatgagcat 205

                                                                       
Query: 209 ctaccagttccttattgtagttggaaggacagggatggaaacccttacaaacgaagccgg 268
            ||||||||||| |||||||||||||||||||| |||||||| || ||||| ||||| ||
Sbjct: 206 ataccagttcctgattgtagttggaaggacaggcatggaaactctcacaaatgaagctgg 265

                                                                       
Query: 269 tgatgtcaccagtcatttgcaaggcatgttcagccggacaataaggttgctcgaggcagg 328
           ||| ||||| |||||||||||||| ||||||| |||||||||||| || || || || ||
Sbjct: 266 tgaagtcactagtcatttgcaaggaatgttcaaccggacaataagattactggaagcggg 325

                                                           
Query: 329 aattaaaccagtatatgtttttgatggcaagcctcctgaaatgaagaa 376
           ||| || ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 326 aatcaagccagtttatgtttttgatggcaagcctcctgatatgaagaa 373
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>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11,
            complete sequence
          Length = 115808

 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Minus

                                                                        
Query: 103  agggtttgacgaagctgctggcggacaacgcgcccaagtcgatgagggagcagaagttcg 162
            ||||||||||||||||  |||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 8179 agggtttgacgaagcttttggcggacaatgcgcccaaggcgatgaaggagcagaagttcg 8120

                                                                      
Query: 163  agagctacttcggccgccgcatcgccgtcgacgccagcatgagcatctaccagttcct 220
            |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 8119 agagctacttcggccggcgcattgccgtcgacgccagcatgagcatctaccagttcct 8062



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                        
Query: 278  cagtcatttgcaaggcatgttcagccggacaataaggttgctcgaggcaggaattaaacc 337
            ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| || ||
Sbjct: 7494 cagtcatttgcaaggtatgttcaaccggacaataaggttgctggaggcaggaatcaagcc 7435

               
Query: 338  agt 340
            |||
Sbjct: 7434 agt 7432



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                       
Query: 222  attgtagttggaaggacagggatggaaacccttacaaacgaagccggtgatgtcaccag 280
            ||||||||||||||||| |||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 7631 attgtagttggaaggacggggatggaaaccctcacgaacgaggccggtgaagtcaccag 7573



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 341  atatgtttttgatggcaagcctcctgaaatgaagaa 376
            |||||||||||| ||||||||||||||  |||||||
Sbjct: 7356 atatgtttttgacggcaagcctcctgatctgaagaa 7321
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>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01,
              complete sequence
          Length = 144395

 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Minus

                                                                          
Query: 103    agggtttgacgaagctgctggcggacaacgcgcccaagtcgatgagggagcagaagttcg 162
              ||||||||||||||||  |||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 140657 agggtttgacgaagcttttggcggacaatgcgcccaaggcgatgaaggagcagaagttcg 140598

                                                                        
Query: 163    agagctacttcggccgccgcatcgccgtcgacgccagcatgagcatctaccagttcct 220
              |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 140597 agagctacttcggccggcgcattgccgtcgacgccagcatgagcatctaccagttcct 140540



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                          
Query: 278    cagtcatttgcaaggcatgttcagccggacaataaggttgctcgaggcaggaattaaacc 337
              ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| || ||
Sbjct: 139972 cagtcatttgcaaggtatgttcaaccggacaataaggttgctggaggcaggaatcaagcc 139913

                 
Query: 338    agt 340
              |||
Sbjct: 139912 agt 139910



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                         
Query: 222    attgtagttggaaggacagggatggaaacccttacaaacgaagccggtgatgtcaccag 280
              ||||||||||||||||| |||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 140109 attgtagttggaaggacggggatggaaaccctcacgaacgaggccggtgaagtcaccag 140051



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 341    atatgtttttgatggcaagcctcctgaaatgaagaa 376
              |||||||||||| ||||||||||||||  |||||||
Sbjct: 139834 atatgtttttgacggcaagcctcctgatctgaagaa 139799
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  178 bits (90), Expect = 1e-41
 Identities = 111/118 (94%)
 Strand = Plus / Minus

                                                                            
Query: 103      agggtttgacgaagctgctggcggacaacgcgcccaagtcgatgagggagcagaagttcg 162
                ||||||||||||||||  |||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 26627182 agggtttgacgaagcttttggcggacaatgcgcccaaggcgatgaaggagcagaagttcg 26627123

                                                                          
Query: 163      agagctacttcggccgccgcatcgccgtcgacgccagcatgagcatctaccagttcct 220
                |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 26627122 agagctacttcggccggcgcattgccgtcgacgccagcatgagcatctaccagttcct 26627065



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                            
Query: 278      cagtcatttgcaaggcatgttcagccggacaataaggttgctcgaggcaggaattaaacc 337
                ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| || ||
Sbjct: 26626497 cagtcatttgcaaggtatgttcaaccggacaataaggttgctggaggcaggaatcaagcc 26626438

                   
Query: 338      agt 340
                |||
Sbjct: 26626437 agt 26626435



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 222      attgtagttggaaggacagggatggaaacccttacaaacgaagccggtgatgtcaccag 280
                ||||||||||||||||| |||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 26626634 attgtagttggaaggacggggatggaaaccctcacgaacgaggccggtgaagtcaccag 26626576



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 341      atatgtttttgatggcaagcctcctgaaatgaagaa 376
                |||||||||||| ||||||||||||||  |||||||
Sbjct: 26626359 atatgtttttgacggcaagcctcctgatctgaagaa 26626324
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>dbj|AP004520.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05P01, TM0048,
             complete sequence
          Length = 110811

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                         
Query: 126   gacaacgcgcccaagtcgatgagggagcagaagttcgagagctacttcggccgccgcatc 185
             |||||||| ||||| |  |||| |||| | || |||||||||||||||||||||   |||
Sbjct: 78354 gacaacgcccccaaatgcatgaaggagaacaaattcgagagctacttcggccgcaaaatc 78295

                                                 
Query: 186   gccgtcgacgccagcatgagcatctaccagttcctt 221
             ||| ||||||||||||||||||| ||||||||||||
Sbjct: 78294 gccatcgacgccagcatgagcatttaccagttcctt 78259



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 341   atatgtttttgatggcaagcctcctgaaatgaagaa 376
             ||||||||||||||| ||||| || || ||||||||
Sbjct: 77843 atatgtttttgatgggaagcccccggatatgaagaa 77808
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>gb|BT013937.1| Lycopersicon esculentum clone 132960F, mRNA sequence
          Length = 1498

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 115/138 (83%), Gaps = 2/138 (1%)
 Strand = Plus / Plus

                                                                       
Query: 93  atgggagtcaagggtttgacgaagctgctggcggacaacgcgcccaagtcga-tgaggga 151
           |||||| |||||||||| | ||||||| |||| ||||| || || |||| || ||| |||
Sbjct: 12  atgggaatcaagggtttaatgaagctgttggctgacaatgctcc-aagtggaatgaagga 70

                                                                       
Query: 152 gcagaagttcgagagctacttcggccgccgcatcgccgtcgacgccagcatgagcatcta 211
           |||||||||||||||||| ||||||||    || ||| ||||||| || |||||||| ||
Sbjct: 71  gcagaagttcgagagctatttcggccgtaaaatagccatcgacgctagtatgagcattta 130

                             
Query: 212 ccagttccttattgtagt 229
            |||||||| ||||||||
Sbjct: 131 tcagttcctgattgtagt 148



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 327 ggaattaaaccagtatatgtttttgatggcaagcctcctgaaatgaagaa 376
           ||||| || ||||| |||||||||||||||||||| |||||  |||||||
Sbjct: 246 ggaatcaagccagtttatgtttttgatggcaagccccctgatttgaagaa 295
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>ref|NM_180546.2| Arabidopsis thaliana 5'-3' exonuclease/ DNA binding / nuclease
           AT5G26680 mRNA, complete cds
          Length = 1379

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                       
Query: 198 agcatgagcatctaccagttccttattgtagttggaaggacagggatggaaacccttaca 257
           ||||||||||| ||||| ||||| ||||| |||||||| || ||||  ||||  || || 
Sbjct: 123 agcatgagcatttaccaattcctcattgttgttggaagaactgggactgaaatgctcact 182

                                                    
Query: 258 aacgaagccggtgatgtcaccagtcatttgcaaggcatgtt 298
           || ||||| ||||| ||||| |||||||| ||||| |||||
Sbjct: 183 aatgaagctggtgaagtcactagtcatttacaagggatgtt 223
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>ref|XM_470320.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1726

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 100 tcaagggtttgacgaagctgctggcggacaacgcgcc 136
           ||||||||||||||||||||||||||||  |||||||
Sbjct: 113 tcaagggtttgacgaagctgctggcggagcacgcgcc 149



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 204 agcatctaccagttccttattgtagttggaagga 237
           ||||||||||||||||| ||||| || |||||||
Sbjct: 217 agcatctaccagttcctcattgtggtaggaagga 250
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>dbj|AB088391.1| Oryza sativa (japonica cultivar-group) OsFEN-1b mRNA for flap
           endonuclease-1b, complete cds
          Length = 1674

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 100 tcaagggtttgacgaagctgctggcggacaacgcgcc 136
           ||||||||||||||||||||||||||||  |||||||
Sbjct: 41  tcaagggtttgacgaagctgctggcggagcacgcgcc 77



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 192 gacgccagcatgagcatctaccagttccttattgtagttggaagga 237
           ||||||||| | ||||||||||||||||| ||||| || |||||||
Sbjct: 133 gacgccagcctcagcatctaccagttcctcattgtggtaggaagga 178
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>dbj|AK069540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019F12, full
           insert sequence
          Length = 1994

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 100 tcaagggtttgacgaagctgctggcggacaacgcgcc 136
           ||||||||||||||||||||||||||||  |||||||
Sbjct: 83  tcaagggtttgacgaagctgctggcggagcacgcgcc 119



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 204 agcatctaccagttccttattgtagttggaagga 237
           ||||||||||||||||| ||||| || |||||||
Sbjct: 187 agcatctaccagttcctcattgtggtaggaagga 220
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>dbj|AK062149.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H03, full
           insert sequence
          Length = 1578

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 100 tcaagggtttgacgaagctgctggcggacaacgcgcc 136
           ||||||||||||||||||||||||||||  |||||||
Sbjct: 113 tcaagggtttgacgaagctgctggcggagcacgcgcc 149



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 204 agcatctaccagttccttattgtagttggaagga 237
           ||||||||||||||||| ||||| || |||||||
Sbjct: 217 agcatctaccagttcctcattgtggtaggaagga 250
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>dbj|AB080084.1| Oryza sativa (japonica cultivar-group) OsFEN-1b mRNA for flap
           endonuclease-1b, complete cds
          Length = 1674

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 100 tcaagggtttgacgaagctgctggcggacaacgcgcc 136
           ||||||||||||||||||||||||||||  |||||||
Sbjct: 41  tcaagggtttgacgaagctgctggcggagcacgcgcc 77



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 192 gacgccagcatgagcatctaccagttccttattgtagttggaagga 237
           ||||||||| | ||||||||||||||||| ||||| || |||||||
Sbjct: 133 gacgccagcctcagcatctaccagttcctcattgtggtaggaagga 178
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 180   cgcatcgccgtcgacgccagcatgagcatctaccagttc 218
             ||||||||||||||||||  ||||||||| |||||||||
Sbjct: 62330 cgcatcgccgtcgacgcctccatgagcatttaccagttc 62292
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>ref|XM_842886.1| Leishmania major strain Friedlin flap endonuclease-1 (FEN-1)
           (LMJ_0281) partial mRNA
          Length = 1188

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 180 cgcatcgccgtcgacgccagcatgagcatctaccagttc 218
           ||||||||||||||||||  ||||||||| |||||||||
Sbjct: 88  cgcatcgccgtcgacgcctccatgagcatttaccagttc 126
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 103      agggtttgacgaagctgctggcggacaacgcgcc 136
                |||||||||||||||||||||||||  |||||||
Sbjct: 34742932 agggtttgacgaagctgctggcggagcacgcgcc 34742965
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>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete
              sequence
          Length = 164352

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 103    agggtttgacgaagctgctggcggacaacgcgcc 136
              |||||||||||||||||||||||||  |||||||
Sbjct: 119718 agggtttgacgaagctgctggcggagcacgcgcc 119685
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 103      agggtttgacgaagctgctggcggacaacgcgcc 136
                |||||||||||||||||||||||||  |||||||
Sbjct: 34833004 agggtttgacgaagctgctggcggagcacgcgcc 34833037
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 345     gtttttgatggcaagcctcctgaaatgaa 373
               |||||||| ||||||||||||||||||||
Sbjct: 1072597 gtttttgacggcaagcctcctgaaatgaa 1072569
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>ref|XM_787809.1| PREDICTED: Strongylocentrotus purpuratus similar to flap
           structure-specific endonuclease 1 (LOC588108), partial
           mRNA
          Length = 228

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 342 tatgtttttgatggcaagcctcctgaaatgaa 373
           ||||| |||||||||||||||||||| |||||
Sbjct: 13  tatgtgtttgatggcaagcctcctgagatgaa 44
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>emb|CR732933.2|CNS0GSGA Tetraodon nigroviridis full-length cDNA
          Length = 1175

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 327 ggaattaaaccagtatatgtttttgatggcaagcc 361
           ||||| |||||||| ||||| ||||||||||||||
Sbjct: 246 ggaatcaaaccagtgtatgtgtttgatggcaagcc 280
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>emb|CR730648.2|CNS0GQPP Tetraodon nigroviridis full-length cDNA
          Length = 1075

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 327 ggaattaaaccagtatatgtttttgatggcaagcc 361
           ||||| |||||||| ||||| ||||||||||||||
Sbjct: 270 ggaatcaaaccagtgtatgtctttgatggcaagcc 304
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>emb|CR730305.2|CNS0GQG6 Tetraodon nigroviridis full-length cDNA
          Length = 1207

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 327 ggaattaaaccagtatatgtttttgatggcaagcc 361
           ||||| |||||||| ||||| ||||||||||||||
Sbjct: 278 ggaatcaaaccagtgtatgtatttgatggcaagcc 312
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>emb|CR725479.2|CNS0GMQ5 Tetraodon nigroviridis full-length cDNA
          Length = 1174

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 327 ggaattaaaccagtatatgtttttgatggcaagcc 361
           ||||| |||||||| ||||| ||||||||||||||
Sbjct: 245 ggaatcaaaccagtgtatgtgtttgatggcaagcc 279
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>emb|CR700163.2|CNS0G373 Tetraodon nigroviridis full-length cDNA
          Length = 1193

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 327 ggaattaaaccagtatatgtttttgatggcaagcc 361
           ||||| |||||||| ||||| ||||||||||||||
Sbjct: 275 ggaatcaaaccagtgtatgtgtttgatggcaagcc 309
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>emb|CR699050.2|CNS0G2C6 Tetraodon nigroviridis full-length cDNA
          Length = 1264

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 327 ggaattaaaccagtatatgtttttgatggcaagcc 361
           ||||| |||||||| ||||| ||||||||||||||
Sbjct: 363 ggaatcaaaccagtgtatgtgtttgatggcaagcc 397
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>emb|CR698211.2|CNS0G1OV Tetraodon nigroviridis full-length cDNA
          Length = 1306

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 327 ggaattaaaccagtatatgtttttgatggcaagcc 361
           ||||| |||||||| ||||| ||||||||||||||
Sbjct: 377 ggaatcaaaccagtgtatgtgtttgatggcaagcc 411
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>emb|CR696087.2|CNS0G01V Tetraodon nigroviridis full-length cDNA
          Length = 1129

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 327 ggaattaaaccagtatatgtttttgatggcaagcc 361
           ||||| |||||||| ||||| ||||||||||||||
Sbjct: 245 ggaatcaaaccagtgtatgtgtttgatggcaagcc 279
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>emb|CR680197.2|CNS0FNSH Tetraodon nigroviridis full-length cDNA
          Length = 980

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 327 ggaattaaaccagtatatgtttttgatggcaagcc 361
           ||||| |||||||| ||||| ||||||||||||||
Sbjct: 49  ggaatcaaaccagtgtatgtgtttgatggcaagcc 83
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>emb|CR659616.2|CNS0F7XI Tetraodon nigroviridis full-length cDNA
          Length = 1174

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 327 ggaattaaaccagtatatgtttttgatggcaagcc 361
           ||||| |||||||| ||||| ||||||||||||||
Sbjct: 245 ggaatcaaaccagtgtatgtgtttgatggcaagcc 279
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>gb|DQ127589.1| Emiliania huxleyi virus 163 clone mike12.seq partial sequence
          Length = 2449

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 324  gcaggaattaaaccagtatatgtttttgatggcaagcctcctg 366
            |||||||||||||| || ||||||||||| || ||||| ||||
Sbjct: 1374 gcaggaattaaacccgtctatgtttttgacggaaagccacctg 1332
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>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86
          Length = 407339

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 324   gcaggaattaaaccagtatatgtttttgatggcaagcctcctg 366
             |||||||||||||| || ||||||||||| || ||||| ||||
Sbjct: 13148 gcaggaattaaacccgtctatgtttttgacggaaagccacctg 13106
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>gb|BC010203.1| Mus musculus flap structure specific endonuclease 1, mRNA (cDNA
           clone MGC:7137 IMAGE:3158176), complete cds
          Length = 2163

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 313 catgagcatctaccagttcctgattg 338
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>ref|XM_712411.1| Candida albicans SC5314 hypothetical protein (CaO19_8182), mRNA
          Length = 1119

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 330 attaaaccagtatatgtttttgatgg 355
           |||||||||||||||||||| |||||
Sbjct: 238 attaaaccagtatatgttttcgatgg 263
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>ref|XM_712317.1| Candida albicans SC5314 hypothetical protein (CaO19_547), mRNA
          Length = 1119

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 330 attaaaccagtatatgtttttgatgg 355
           |||||||||||||||||||| |||||
Sbjct: 238 attaaaccagtatatgttttcgatgg 263
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>gb|BC027295.1| Mus musculus flap structure specific endonuclease 1, mRNA (cDNA
           clone MGC:28169 IMAGE:3985840), complete cds
          Length = 2102

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 247 catgagcatctaccagttcctgattg 272
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>gb|AC132148.3| Mus musculus BAC clone RP23-6N21 from chromosome 19, complete sequence
          Length = 191402

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 200   catgagcatctaccagttccttattg 225
             ||||||||||||||||||||| ||||
Sbjct: 56140 catgagcatctaccagttcctgattg 56115
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>ref|NM_007999.3| Mus musculus flap structure specific endonuclease 1 (Fen1), mRNA
          Length = 2215

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 383 catgagcatctaccagttcctgattg 408
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>gb|AY014962.1| Mus musculus flap endonuclease-1 (Fen1) gene, complete cds
          Length = 6361

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 200  catgagcatctaccagttccttattg 225
            ||||||||||||||||||||| ||||
Sbjct: 3966 catgagcatctaccagttcctgattg 3991
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>gb|AC026761.17| Mus musculus Strain 129S6/SvEvTac chromosome 19 BAC, RP22-325J22,
             Complete Sequence, complete sequence
          Length = 163475

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 200   catgagcatctaccagttccttattg 225
             ||||||||||||||||||||| ||||
Sbjct: 11516 catgagcatctaccagttcctgattg 11541
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>dbj|AK153889.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430002O07
           product:flap structure specific endonuclease 1, full
           insert sequence
          Length = 2174

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 350 catgagcatctaccagttcctgattg 375
to top
>dbj|AK161047.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched
           library, clone:4631429I24 product:flap structure
           specific endonuclease 1, full insert sequence
          Length = 2194

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 363 catgagcatctaccagttcctgattg 388
to top
>dbj|AK168731.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:I920048F04 product:flap structure
           specific endonuclease 1, full insert sequence
          Length = 2208

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 375 catgagcatctaccagttcctgattg 400
to top
>dbj|AK166948.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0025A16 product:flap structure
           specific endonuclease 1, full insert sequence
          Length = 2183

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 351 catgagcatctaccagttcctgattg 376
to top
>dbj|AB191468.1| Mus musculus 1810006K21Rik, Fen1 genes for hypothetical protein, flap
             endonuclease 1, complete cds
          Length = 13373

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 200   catgagcatctaccagttccttattg 225
             ||||||||||||||||||||| ||||
Sbjct: 10683 catgagcatctaccagttcctgattg 10708
to top
>dbj|AK042942.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730042D09 product:flap
           structure specific endonuclease 1, full insert sequence
          Length = 2047

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 216 catgagcatctaccagttcctgattg 241
to top
>dbj|AK046256.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230361P13
           product:flap structure specific endonuclease 1, full
           insert sequence
          Length = 2177

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 379 catgagcatctaccagttcctgattg 404
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>dbj|AK076977.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930584I03 product:flap structure
           specific endonuclease 1, full insert sequence
          Length = 2192

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 357 catgagcatctaccagttcctgattg 382
to top
>dbj|AK078778.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:8030475P17 product:flap
           structure specific endonuclease 1, full insert sequence
          Length = 2202

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 370 catgagcatctaccagttcctgattg 395
to top
>dbj|AK029975.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932411N02 product:hypothetical protein,
            full insert sequence
          Length = 3333

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 200  catgagcatctaccagttccttattg 225
            ||||||||||||||||||||| ||||
Sbjct: 1922 catgagcatctaccagttcctgattg 1897
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>dbj|AK187493.1| Mus musculus cDNA, clone:Y0G0142A22, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000025651, based on BLAT search
          Length = 281

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 171 catgagcatctaccagttcctgattg 196
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>gb|L26320.1|MUSFEN1X Mouse flap endonuclease-1 (FEN-1) mRNA, complete cds
          Length = 2033

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 200 catgagcatctaccagttccttattg 225
           ||||||||||||||||||||| ||||
Sbjct: 211 catgagcatctaccagttcctgattg 236
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 177   cgccgcatcgccgtcgacgcc 197
             |||||||||||||||||||||
Sbjct: 27124 cgccgcatcgccgtcgacgcc 27104
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 177    cgccgcatcgccgtcgacgcc 197
              |||||||||||||||||||||
Sbjct: 830970 cgccgcatcgccgtcgacgcc 830950
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>ref|XM_712410.1| Candida albicans SC5314 hypothetical protein (CaO19_8181), mRNA
          Length = 312

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 331 ttaaaccagtatatgtttttgatgg 355
           ||||||||||||||||||| |||||
Sbjct: 312 ttaaaccagtatatgttttcgatgg 288
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>ref|XM_712316.1| Candida albicans SC5314 hypothetical protein (CaO19_546), mRNA
          Length = 312

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 331 ttaaaccagtatatgtttttgatgg 355
           ||||||||||||||||||| |||||
Sbjct: 312 ttaaaccagtatatgttttcgatgg 288
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>emb|CR698159.2|CNS0G1NF Tetraodon nigroviridis full-length cDNA
          Length = 1301

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 333 aaaccagtatatgtttttgatggcaagcc 361
           |||||||| ||||| ||||||||||||||
Sbjct: 403 aaaccagtgtatgtgtttgatggcaagcc 431
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 177    cgccgcatcgccgtcgacgcc 197
              |||||||||||||||||||||
Sbjct: 673376 cgccgcatcgccgtcgacgcc 673356
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>emb|AJ719700.1| Gallus gallus mRNA for hypothetical protein, clone 5g12
          Length = 2461

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 200 catgagcatctaccagttcct 220
           |||||||||||||||||||||
Sbjct: 143 catgagcatctaccagttcct 163
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>emb|BX294662.13| Zebrafish DNA sequence from clone DKEYP-117E6 in linkage group 20,
             complete sequence
          Length = 154558

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 357   aagcctcctgaaatgaagaag 377
             |||||||||||||||||||||
Sbjct: 40075 aagcctcctgaaatgaagaag 40095
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 177    cgccgcatcgccgtcgacgcc 197
              |||||||||||||||||||||
Sbjct: 582109 cgccgcatcgccgtcgacgcc 582089
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>dbj|AB058602.1| Gallus gallus FEN1 gene for FEN-1 nuclease, complete cds
          Length = 1146

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 200 catgagcatctaccagttcct 220
           |||||||||||||||||||||
Sbjct: 108 catgagcatctaccagttcct 128
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>ref|XM_483640.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1416

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 tcgccgtcgacgccagcatg 203
           ||||||||||||||||||||
Sbjct: 51  tcgccgtcgacgccagcatg 70
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>gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, complete sequence
          Length = 167215

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    tggaaggacagggatggaaa 249
              ||||||||||||||||||||
Sbjct: 144767 tggaaggacagggatggaaa 144786
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>gb|AC118211.10| Mus musculus chromosome 8, clone RP24-223O5, complete sequence
          Length = 192713

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    cggccgccgcatcgccgtcg 192
              ||||||||||||||||||||
Sbjct: 123586 cggccgccgcatcgccgtcg 123567
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>ref|XM_661985.1| Cryptosporidium hominis TU502 flap endonuclease 1 (Chro.70245)
           partial mRNA
          Length = 1365

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 324 gcaggaattaaaccagtatatgtttttgatgg 355
           |||||||||||||| |||| ||| ||||||||
Sbjct: 127 gcaggaattaaacctgtatttgtatttgatgg 158
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>gb|AC148406.12| Medicago truncatula clone mth2-46e9, complete sequence
          Length = 110272

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 341   atatgtttttgatggcaagcctcctgaaatgaagaa 376
             ||||||||||||||| ||||| || || ||||||||
Sbjct: 53873 atatgtttttgatgggaagccaccggagatgaagaa 53838
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>emb|BX571952.13| Zebrafish DNA sequence from clone DKEY-35E8 in linkage group 11,
             complete sequence
          Length = 175925

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   aagcctcctgaaatgaagaa 376
             ||||||||||||||||||||
Sbjct: 76296 aagcctcctgaaatgaagaa 76315
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 348     tttgatggcaagcctcctga 367
               ||||||||||||||||||||
Sbjct: 2004842 tttgatggcaagcctcctga 2004861
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    ccgcatcgccgtcgacgcca 198
              ||||||||||||||||||||
Sbjct: 382041 ccgcatcgccgtcgacgcca 382060
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     cgccgtcgacgccagcatga 204
               ||||||||||||||||||||
Sbjct: 2562039 cgccgtcgacgccagcatga 2562058
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 184      tcgccgtcgacgccagcatg 203
                ||||||||||||||||||||
Sbjct: 27396601 tcgccgtcgacgccagcatg 27396620
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>gb|AE004710.1| Pseudomonas aeruginosa PAO1, section 271 of 529 of the complete
            genome
          Length = 11873

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 333  aaaccagtatatgtttttga 352
            ||||||||||||||||||||
Sbjct: 8798 aaaccagtatatgtttttga 8779
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>gb|AC131011.5| Homo sapiens X BAC RP13-314C10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 176121

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    aggaaatgaagcacagaaga 424
              ||||||||||||||||||||
Sbjct: 101877 aggaaatgaagcacagaaga 101858
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 170     cttcggccgccgcatcgccg 189
               ||||||||||||||||||||
Sbjct: 2052059 cttcggccgccgcatcgccg 2052040
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>gb|AC121952.4| Mus musculus BAC clone RP24-217M18 from chromosome 8, complete sequence
          Length = 111845

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   cggccgccgcatcgccgtcg 192
             ||||||||||||||||||||
Sbjct: 11337 cggccgccgcatcgccgtcg 11318
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 172     tcggccgccgcatcgccgtcgacg 195
               |||||||||||||||||| |||||
Sbjct: 7474563 tcggccgccgcatcgccgacgacg 7474540
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>dbj|AK109374.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-H02, full
           insert sequence
          Length = 1440

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 tcgccgtcgacgccagcatg 203
           ||||||||||||||||||||
Sbjct: 169 tcgccgtcgacgccagcatg 188
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>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0544G09
          Length = 137481

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   tcgccgtcgacgccagcatg 203
             ||||||||||||||||||||
Sbjct: 23396 tcgccgtcgacgccagcatg 23415
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>dbj|AK073704.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060E10, full
           insert sequence
          Length = 1417

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 tcgccgtcgacgccagcatg 203
           ||||||||||||||||||||
Sbjct: 51  tcgccgtcgacgccagcatg 70
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>gb|AF027770.1|AF027770 Mycobacterium smegmatis FxbA (fxbA) gene, partial cds; FxbB (fxbB),
             FxbC (fxbC), and FxuD (fxtD) genes, complete cds; and
             unknown genes
          Length = 30683

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 171   ttcggccgccgcatcgccgtcgacgcca 198
             |||| ||||||||||| |||||||||||
Sbjct: 10815 ttcgaccgccgcatcgacgtcgacgcca 10842
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>gb|AF034152.1|AF034152 Mycobacterium smegmatis exochelin gene cluster, ExiT (exiT) and FxbB
             (fxbB) genes, complete cds; and FxbC (fxbC) gene, partial
             cds
          Length = 15223

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 171   ttcggccgccgcatcgccgtcgacgcca 198
             |||| ||||||||||| |||||||||||
Sbjct: 10382 ttcgaccgccgcatcgacgtcgacgcca 10409
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>gb|U40369.1|HSU40369 Human spermidine/spermine N1-acetyltransferase (SSAT) gene, complete
            cds
          Length = 11200

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 405  aggaaatgaagcacagaaga 424
            ||||||||||||||||||||
Sbjct: 2322 aggaaatgaagcacagaaga 2341
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>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island
            PAGI-2(C)
          Length = 158230

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 333  aaaccagtatatgtttttga 352
            ||||||||||||||||||||
Sbjct: 8186 aaaccagtatatgtttttga 8205


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,576,195
Number of Sequences: 3902068
Number of extensions: 3576195
Number of successful extensions: 74842
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74271
Number of HSP's gapped (non-prelim): 571
length of query: 437
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 415
effective length of database: 17,147,199,772
effective search space: 7116087905380
effective search space used: 7116087905380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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