ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart53a06 |
|---|---|
| Clone Library Name | barley_pub |
>CDC31_SCHPO (O74435) Cell division control protein 31| Length = 176 Score = 33.9 bits (76), Expect = 0.11 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +3 Query: 99 FDGDKDGVVTFSETYAAFRALGFGYARLHLERYLHQWRPWPPDQTGK 239 FD DKD + + E AA RALGF + + + L + D+TGK Sbjct: 46 FDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDF-----DKTGK 87
>CBP1_ORYSA (P37890) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine| carboxypeptidase I) (Carboxypeptidase C) Length = 510 Score = 32.3 bits (72), Expect = 0.33 Identities = 21/65 (32%), Positives = 28/65 (43%) Frame = +3 Query: 24 GSQASAHGNDSVACGMTALQKHAAFFDGDKDGVVTFSETYAAFRALGFGYARLHLERYLH 203 GS S H N +T A + GD D V ++ T A R+LG+G + Sbjct: 410 GSMISYHKN------LTGQGYRAFIYSGDHDMCVPYTGTEAWTRSLGYG--------VID 455 Query: 204 QWRPW 218 WRPW Sbjct: 456 SWRPW 460
>CATR_GIALA (Q24956) Caltractin (Centrin)| Length = 176 Score = 32.3 bits (72), Expect = 0.33 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +3 Query: 99 FDGDKDGVVTFSETYAAFRALGFGYARLHLERYLHQW 209 FD D+ G + F E A RALGF + ++R ++++ Sbjct: 43 FDADRSGRIDFHELKVAMRALGFDVKKEEIQRIMNEY 79
>CBP1_HORVU (P07519) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine| carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine car Length = 499 Score = 31.2 bits (69), Expect = 0.73 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +3 Query: 24 GSQASAHGNDSVACGMTALQKHAAFFDGDKDGVVTFSETYAAFRALGFGYARLHLERYLH 203 GS + H N +T+ A F GD D V F+ + A ++LG+G + Sbjct: 399 GSMIAYHKN------LTSQGYRAIIFSGDHDMCVPFTGSEAWTKSLGYG--------VVD 444 Query: 204 QWRPW 218 WRPW Sbjct: 445 SWRPW 449
>GABT_CAEEL (Q21217) Probable 4-aminobutyrate aminotransferase, mitochondrial| precursor (EC 2.6.1.19) ((S)-3-amino-2-methylpropionate transaminase) (EC 2.6.1.22) (Gamma-amino-N-butyrate transaminase) (GABA transaminase) (GABA aminotransferase) (GABA-AT) ( Length = 483 Score = 30.4 bits (67), Expect = 1.2 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = +3 Query: 9 FPMLQGSQASAHGNDSVAC-GMTALQKHAAFFDGDKDGVVTFSETYAAFRALGFGYARLH 185 FP + +H S+A G+ A+Q +++ + T Y A R G G LH Sbjct: 118 FPRTDFADGISHALTSIAPKGLKAVQTMLCGTSANENAIKTAFIWYQAQRRGGLGPDALH 177 Query: 186 LERYLHQWRPWPPD 227 LE ++Q +P P+ Sbjct: 178 LESCMNQQKPGTPN 191
>STAN_DROME (Q9V5N8) Protocadherin-like wing polarity protein stan precursor| (Protein starry night) (Protein flamingo) Length = 3574 Score = 29.6 bits (65), Expect = 2.1 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 Query: 242 SFSGLVWGPRTPLMKVALKVEAGVSESEGPKRC 144 SF+G VW PRTPL VA++ + +G + C Sbjct: 2150 SFAGGVWWPRTPLGGVAIEGCPPPARGKGQRSC 2182
>POR_CHLRE (Q39617) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 397 Score = 29.3 bits (64), Expect = 2.8 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = +3 Query: 12 PMLQGSQ---ASAHGNDSVACGMTALQKHAAFFDGDKDGVVTFSETY 143 PM+ G + A A+ + VAC MT Q H F D +TF+ Y Sbjct: 258 PMMDGQEFNGAKAYKDSKVACMMTVRQMHQRFHDATG---ITFASLY 301
>CETN3_MOUSE (O35648) Centrin-3| Length = 167 Score = 28.9 bits (63), Expect = 3.6 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +3 Query: 99 FDGDKDGVVTFSETYAAFRALGFGYARLHLERYLHQWRPWPPDQTGK 239 FD DKD + + E A RALGF + + + L + + + TGK Sbjct: 37 FDTDKDQAIDYHELKVAMRALGFDVKKADVLKIL---KDYDREATGK 80
>CETN3_HUMAN (O15182) Centrin-3| Length = 167 Score = 28.9 bits (63), Expect = 3.6 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +3 Query: 99 FDGDKDGVVTFSETYAAFRALGFGYARLHLERYLHQWRPWPPDQTGK 239 FD DKD + + E A RALGF + + + L + + + TGK Sbjct: 37 FDTDKDEAIDYHELKVAMRALGFDVKKADVLKIL---KDYDREATGK 80
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 28.5 bits (62), Expect = 4.7 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Frame = +3 Query: 105 GDKDGVVTF----SETYAAFRALGFGYARLHLERYLHQWRPWPPDQTG 236 G+ +G++T Y+AFR FG+ L ++ H + W +Q G Sbjct: 396 GNSEGLLTDMMQPQPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDG 443
>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220| antigen) [Contains: Insulin receptor alpha subunit; Insulin receptor beta subunit] Length = 1382 Score = 27.7 bits (60), Expect = 8.0 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = +3 Query: 159 LGFGYARLHLERYLHQWRP-WPPDQTGK*DGALFY 260 L F Y R ++ L +W P WPPD LFY Sbjct: 500 LKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFY 534
>FHAB_BORPE (P12255) Filamentous hemagglutinin| Length = 3590 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 Query: 139 VSEKVTTPSLSPSKNAACFCSAVMPQATESLP 44 V+EKVTTP++ P V P+ T+ LP Sbjct: 3375 VAEKVTTPAVQPQLAKVETVQPVKPETTKPLP 3406 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.129 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,432,859 Number of Sequences: 219361 Number of extensions: 465179 Number of successful extensions: 1767 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1745 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1767 length of database: 80,573,946 effective HSP length: 64 effective length of database: 66,534,842 effective search space used: 1596836208 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
