Clone Information

BLAST Search Result

Clone Name	bart52h11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs...	33	0.12
2	TEGU_EHV1B (P28955) Large tegument protein	33	0.16
3	IF2_MYCTU (P65131) Translation initiation factor IF-2	33	0.21
4	IF2_MYCBO (P65132) Translation initiation factor IF-2	33	0.21
5	SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precurs...	32	0.36
6	VGLC_HHV2H (Q89730) Glycoprotein C precursor	32	0.47
7	VGLC_HHV23 (P06475) Glycoprotein C precursor	32	0.47
8	VGLC_HHV2G (P03173) Glycoprotein C precursor (Glycoprotein F)	32	0.47
9	AP180_HUMAN (O60641) Clathrin coat assembly protein AP180 (Clath...	30	1.8
10	SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)	30	1.8
11	DRD4_HUMAN (P21917) D(4) dopamine receptor (Dopamine D4 receptor...	29	2.3
12	SYH_MESAU (P07178) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histi...	29	2.3
13	HPPK_PORGI (O83019) 2-amino-4-hydroxy-6-hydroxymethyldihydropter...	29	3.0
14	PDE3B_RAT (Q63085) cGMP-inhibited 3',5'-cyclic phosphodiesterase...	29	3.0
15	ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline...	29	3.0
16	ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor e...	29	3.0
17	MANB_CALSA (P22533) Beta-mannanase/endoglucanase A precursor [In...	29	3.0
18	GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4) (Endo...	29	3.0
19	SPEG_HUMAN (Q15772) Striated muscle preferentially expressed pro...	29	3.0
20	APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot...	29	3.0
21	FETUA_CAVPO (O70159) Alpha-2-HS-glycoprotein precursor (Fetuin-A)	29	3.0
22	ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor e...	29	3.0
23	CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22	28	4.0
24	NIFA_AZOLI (P54929) Nif-specific regulatory protein	28	4.0
25	MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)	28	4.0
26	DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-re...	28	4.0
27	INVS_MOUSE (O89019) Inversin (Inversion of embryo turning protei...	28	4.0
28	IF2_COREF (Q8FPA7) Translation initiation factor IF-2	28	4.0
29	RIMS2_RAT (Q9JIS1) Regulating synaptic membrane exocytosis prote...	28	5.2
30	B3A4_RAT (Q8K4V2) Anion exchange protein 4 (Anion exchanger 4) (...	28	5.2
31	ODPX_HUMAN (O00330) Pyruvate dehydrogenase protein X component, ...	28	5.2
32	OXR1_GIBZE (Q4I8S2) Oxidation resistance protein 1	28	5.2
33	BCCP_SOYBN (Q42783) Biotin carboxyl carrier protein of acetyl-Co...	28	5.2
34	CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor	28	5.2
35	SYNJ2_MOUSE (Q9D2G5) Synaptojanin-2 (EC 3.1.3.36) (Synaptic inos...	24	6.1
36	NUDT4_RAT (Q99MY2) Diphosphoinositol polyphosphate phosphohydrol...	28	6.8
37	NUDT4_MOUSE (Q8R2U6) Diphosphoinositol polyphosphate phosphohydr...	28	6.8
38	VINC_DROME (O46037) Vinculin	28	6.8
39	PR28_MYCTU (P0A5Q6) Proline-rich 28 kDa antigen precursor	28	6.8
40	PR28_MYCBO (P0A5Q7) Proline-rich 28 kDa antigen precursor	28	6.8
41	DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-re...	28	6.8
42	NCTR2_HUMAN (O95944) Natural cytotoxicity triggering receptor 2 ...	28	6.8
43	R157_BOVIN (Q28183) Retina-specific 15.7 kDa protein	27	8.9
44	CD8A_RAT (P07725) T-cell surface glycoprotein CD8 alpha chain pr...	27	8.9
45	Y2729_BURPS (Q93SM8) UPF0226 protein BPSL2729	27	8.9
46	TM55A_BOVIN (Q3SZ48) Transmembrane protein 55A (EC 3.1.3.-) (Typ...	27	8.9
47	UNG_EHV1V (P69859) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)	27	8.9
48	UNG_EHV1B (P28866) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)	27	8.9
49	SPRI_DROME (Q8MQW8) Protein sprint (SH2 poly-proline-containing ...	27	8.9
50	AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding f...	27	8.9
51	TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)	27	8.9
52	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	27	8.9
53	RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast prec...	27	8.9
54	ZYX_CHICK (Q04584) Zyxin	27	8.9
55	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	27	8.9
56	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	27	8.9
57	MSL5_YEAST (Q12186) Branchpoint-bridging protein MSL5 (MUD synth...	27	8.9
58	KS6B2_HUMAN (Q9UBS0) Ribosomal protein S6 kinase beta-2 (EC 2.7....	27	8.9
59	WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting ...	27	8.9
60	PKN6_MYXXA (P54738) Serine/threonine-protein kinase pkn6 (EC 2.7...	27	8.9
61	PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosp...	27	8.9
62	NCOA2_RAT (Q9WUI9) Nuclear receptor coactivator 2 (NCoA-2) (Tran...	27	8.9
63	DMI1L_ORYSA (Q75LD5) Putative ion channel DMI1-like, chloroplast...	27	8.9
64	F100A_HUMAN (Q8TB05) Protein FAM100A	27	8.9

>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -1

Query: 160 CHAATASVRTRCAGWRRYGGTRGIIAGEGRRRC 62
           C A  + V T CAGWR+ G   GI   EG   C
Sbjct: 54  CRAPGSQVPTCCAGWRQQGDECGIAVCEGNSTC 86

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>TEGU_EHV1B (P28955) Large tegument protein|
          Length = 3421

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +2

Query: 47   PAQTVTPTPPLPRDDTARAAVPPPTGAPRSHRRRCCVAPLPQ 172
            P  T+ P PPLP+  +  A+ PPPT  P          PLPQ
Sbjct: 2587 PPPTLPPAPPLPQSTSKAASGPPPTLPP--------APPLPQ 2620



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +2

Query: 47   PAQTVTPTPPLPRDDTARAAVPPPTGAPRSHRRRCCVAPLPQ 172
            P  T+ P PPLP+  +  A+ PPPT  P          PLPQ
Sbjct: 2566 PPPTLPPAPPLPQSTSKAASGPPPTLPP--------APPLPQ 2599



 Score = 31.2 bits (69), Expect = 0.61
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +2

Query: 56   TVTPTPPLPRDDTARAAVPPPTGAPRSHRRRCCVAPLPQ 172
            T+ P PPLP+  +  A+ PPPT  P          PLPQ
Sbjct: 2548 TLPPAPPLPQSTSKAASGPPPTLPP--------APPLPQ 2578

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>IF2_MYCTU (P65131) Translation initiation factor IF-2|
          Length = 900

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = +2

Query: 47  PAQTVTPTPPLPRDDTARAAVPPPTGAPRS 136
           PA    P PP PR  TAR  VP P  +P S
Sbjct: 162 PADRPIPRPPAPRPGTARPGVPRPGASPGS 191

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>IF2_MYCBO (P65132) Translation initiation factor IF-2|
          Length = 900

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = +2

Query: 47  PAQTVTPTPPLPRDDTARAAVPPPTGAPRS 136
           PA    P PP PR  TAR  VP P  +P S
Sbjct: 162 PADRPIPRPPAPRPGTARPGVPRPGASPGS 191

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>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -1

Query: 160 CHAATASVRTRCAGWRRYGGTRGIIAGEGRRRC 62
           C    + V T CAGWR+ G   GI   EG   C
Sbjct: 46  CRTPGSQVLTCCAGWRQLGDECGIAVCEGNSTC 78

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>VGLC_HHV2H (Q89730) Glycoprotein C precursor|
          Length = 480

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
 Frame = +2

Query: 50  AQTVTPTPPLPRD------DTARAAVPPPTGAPRS 136
           A   TPTPP PR        TA+ A PP TG P++
Sbjct: 55  APRTTPTPPQPRKATKSKASTAKPAPPPKTGPPKT 89

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>VGLC_HHV23 (P06475) Glycoprotein C precursor|
          Length = 480

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
 Frame = +2

Query: 50  AQTVTPTPPLPRD------DTARAAVPPPTGAPRS 136
           A   TPTPP PR        TA+ A PP TG P++
Sbjct: 55  APRTTPTPPQPRKATKSKASTAKPAPPPKTGPPKT 89

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>VGLC_HHV2G (P03173) Glycoprotein C precursor (Glycoprotein F)|
          Length = 479

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
 Frame = +2

Query: 50  AQTVTPTPPLPRD------DTARAAVPPPTGAPRS 136
           A   TPTPP PR        TA+ A PP TG P++
Sbjct: 54  APRTTPTPPQPRKATKSKASTAKPAPPPKTGPPKT 88

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>AP180_HUMAN (O60641) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein)
          Length = 907

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 44  SPAQTVTPTPPLPRDDTARAAVPPPTGAPRS 136
           +PA+T+  +PP+    TA AAVP  T  P S
Sbjct: 317 TPAKTIDTSPPVDLFATASAAVPVSTSKPSS 347

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>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)|
          Length = 582

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +2

Query: 47  PAQTVTPTPPLPRDDTARAAVPPPTGAPRSHRR-RCCVAPLPQEA 178
           P     P PP P    A A+  PPT +P   R+     AP PQ A
Sbjct: 29  PEPQQPPPPPPPGPGAASASAAPPTASPGPERKPPPASAPAPQPA 73

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>DRD4_HUMAN (P21917) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)|
           dopamine receptor)
          Length = 467

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/43 (34%), Positives = 16/43 (37%)
 Frame = +2

Query: 41  CSPAQTVTPTPPLPRDDTARAAVPPPTGAPRSHRRRCCVAPLP 169
           C P     P P LP+D       PP  G PR      C  P P
Sbjct: 290 CGP-DCAPPAPGLPQDPCGPDCAPPAPGLPRGPCGPDCAPPAP 331



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 9/45 (20%)
 Frame = +2

Query: 41  CSPAQTVTPTPPLPRD---------DTARAAVPPPTGAPRSHRRR 148
           C P     P P LP D         D  RAA  PP   P++ RRR
Sbjct: 338 CGP-DCAPPAPGLPPDPCGSNCAPPDAVRAAALPPQTPPQTRRRR 381

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>SYH_MESAU (P07178) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 508

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 130 RCAGWRRYGGTRGIIAGEGRR-RCYGLSWG 44
           +C  WRRY G  G+   +GR+  C GLS G
Sbjct: 355 QCGCWRRYDGLVGMFDPKGRKVPCVGLSIG 384

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>HPPK_PORGI (O83019) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine|
           pyrophosphokinase (EC 2.7.6.3)
           (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase)
           (HPPK) (6-hydroxymethyl-7,8-dihydropterin
           pyrophosphokinase) (PPPK)
          Length = 147

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 293 WAPQAPAPRRNLAVGLRSQQRPSEIRHV 376
           W  ++P P  N  V LRS+ +P +I H+
Sbjct: 45  WGFESPHPFLNAVVALRSELKPQDILHI 72

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>PDE3B_RAT (Q63085) cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC|
           3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B)
           (CGI-PDE B) (CGIPDE1)
          Length = 1108

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = +2

Query: 17  DREERNHVCSPAQTVTPTPPLPRDDTARAAVPPPTGAPRSHRRRCCVAPLPQE 175
           D  ER+   +PA    P PP P   TA AA PP +   R+   + CV+PL Q+
Sbjct: 4   DERERD---TPAMRSPPPPPPPA--TATAASPPES--LRNGYVKSCVSPLRQD 49

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>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein|
           1) (NDPP-1)
          Length = 802

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 65  PTPPLPRDDTARAAVPPPTGAP 130
           P PPLP      +A+PPP G P
Sbjct: 547 PPPPLPSGPAYASALPPPPGPP 568

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>ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 564

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 41  CSPAQTVTPTPPLPRDDTARAAVPPPTGAPRSHR 142
           C P     PTPP+P   +  + +PPP  AP  +R
Sbjct: 521 CPPPPPSAPTPPIP---SPPSTLPPPPQAPPPNR 551

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>MANB_CALSA (P22533) Beta-mannanase/endoglucanase A precursor [Includes: Mannan|
           endo-1,4-beta-mannosidase A (EC 3.2.1.78)
           (Beta-mannanase) (Endo-1,4-mannanase);
           Endo-1,4-beta-glucanase (EC 3.2.1.4) (Cellulase)]
          Length = 1331

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +2

Query: 44  SPAQTVTPTP-PLPRDDTARAAVPPPTGAPRS 136
           +P  TVTPTP P P       A P PT  P S
Sbjct: 328 TPTSTVTPTPTPTPTPTPTVTATPTPTPTPVS 359

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>GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4)|
            (Endo-1,4-beta-glucanase A) (Cellulase A)
          Length = 1742

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = +2

Query: 44   SPAQTVTPTP---PLPRDDTARAAVPPPTGAP 130
            +PA TVTPTP   P P       A P PT  P
Sbjct: 1062 TPAPTVTPTPTVTPTPTPAPTPTATPTPTPTP 1093

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>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3223

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = +2

Query: 47   PAQTVTP----TPPLPRDDTARAAVPPPTGAPRSHR 142
            P+ TV+P    TPP     + +A  PPP   PR HR
Sbjct: 2815 PSVTVSPSSPPTPPSQALSSLKAVGPPPQTPPRRHR 2850

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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 44  SPAQTVTPTPPLPRDDTARAAVPPPTGAPR 133
           SP    +P+PP P    A   VPPP+ +P+
Sbjct: 63  SPKPGPSPSPPKPPPSPAPKPVPPPSPSPK 92

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>FETUA_CAVPO (O70159) Alpha-2-HS-glycoprotein precursor (Fetuin-A)|
          Length = 358

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2

Query: 23  EERNHVCSPAQTVTPTPPLPRDDTARAAVPPPTGAP 130
           EE +  C+   T  P  PLP+ D A +A PPP   P
Sbjct: 240 EEVSVTCTVFPT-QPVAPLPQPDAASSANPPPAADP 274

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>ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 562

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 41  CSPAQTVTPTPPLPRDDTARAAVPPPTGAPRSHR 142
           C P     PTPP+P   +  + +PPP  AP  +R
Sbjct: 519 CPPPAPSAPTPPIP---SPPSTLPPPPQAPPPNR 549

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>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22|
          Length = 1010

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 29  RNHVCSPAQTVTPTPPLPRDDTARAAVPPPTGAPRSHRR 145
           R++  S +++V+ +PP  R   +R+  PPP G  RS+ R
Sbjct: 774 RSYSRSVSKSVSRSPPRRRAVESRSPSPPPRGRGRSYDR 812

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>NIFA_AZOLI (P54929) Nif-specific regulatory protein|
          Length = 624

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
 Frame = +2

Query: 38  VCSPAQTVTPTP----PLPRDDTARAAVPPPTGAPRSHRRRCCVAPLPQ 172
           VC  AQ   P P    PLP      AA P PT    +        PL +
Sbjct: 527 VCGAAQPAVPVPLIPLPLPEPSAPAAAAPAPTSVTNAAPPPAAEVPLDE 575

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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 44   SPAQTVTPTPPLPRDDTARAAVPPPTGAPRS 136
            SP  T TP+PP+    T     PPPT  P S
Sbjct: 1658 SPPTTTTPSPPITTTTT-----PPPTTTPSS 1683



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +2

Query: 44   SPAQTVTPTPPLPRDDTARAAVPPPTGAP 130
            SP  T TP+PP     T     PPPT  P
Sbjct: 1579 SPPTTTTPSPP-----TITTTTPPPTTTP 1602

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>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)|
           (DRF1)
          Length = 1248

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +2

Query: 56  TVTPTPPLPRDDTARAAVPPPTGAPRSHRRRCCVAPLP 169
           T+ P PP P D T     PPP   P        ++P P
Sbjct: 585 TIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGTAISPPP 622

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>INVS_MOUSE (O89019) Inversin (Inversion of embryo turning protein)|
           (Nephrocystin-2)
          Length = 1062

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 29  RNHVCSPAQTVTPTPPLPRDDTARAAVPPPTGAPRSH 139
           R+H CS +  V P PP P+++ ++    P    P SH
Sbjct: 619 RSH-CSSSAPVLPCPPSPQNEGSKQDATPSKQPPASH 654

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>IF2_COREF (Q8FPA7) Translation initiation factor IF-2|
          Length = 964

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 6   GPNEIGRSATTFAPQLKP*HRRRPSPAMIPRVP 104
           GP   G +A   A Q +    RRPSPAM+P  P
Sbjct: 249 GPRPQGGNAAGAASQERQGGGRRPSPAMMPPTP 281

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>RIMS2_RAT (Q9JIS1) Regulating synaptic membrane exocytosis protein 2|
            (Rab3-interacting molecule 2) (RIM 2)
          Length = 1555

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 290  AWAPQAPAPRRNLAVGLRSQQRPSEIRHVLRL 385
            +W+P  P P+RN+  GLR  +       + R+
Sbjct: 966  SWSPSVPPPQRNVEQGLRGTRATGHYNTISRM 997

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>B3A4_RAT (Q8K4V2) Anion exchange protein 4 (Anion exchanger 4) (Solute|
           carrier family 4 member 9)
          Length = 953

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +2

Query: 53  QTVTPTPPLPRDDTARAAVPPPTGAPRSHRR 145
           Q VT  PP   D TAR  +PPP   P  H+R
Sbjct: 287 QEVTALPPGRWDRTAR--IPPPKCLPSQHKR 315

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>ODPX_HUMAN (O00330) Pyruvate dehydrogenase protein X component, mitochondrial|
           precursor (Dihydrolipoamide dehydrogenase-binding
           protein of pyruvate dehydrogenase complex)
           (Lipoyl-containing pyruvate dehydrogenase complex
           component X) (E3-binding protein)
          Length = 501

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 44  SPAQTVTPTPPLPRDDTARAAVPPPTGAPRS 136
           +PA T TPT P P   TA  + P P   P S
Sbjct: 234 TPAPTATPTAPSPLQATAGPSYPRPVIPPVS 264

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>OXR1_GIBZE (Q4I8S2) Oxidation resistance protein 1|
          Length = 326

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
 Frame = +2

Query: 50  AQTVTPTPPLPRDDTAR-------AAVPPPTGAPRSHRRRCCVAPLPQEA 178
           A  +TP PP P  DT          A PPP+    +       +P P EA
Sbjct: 202 ASNITPLPPPPSADTTNLNSRNTTLAPPPPSSEANTPTHSRPASPTPSEA 251

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>BCCP_SOYBN (Q42783) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,|
           chloroplast precursor (BCCP)
          Length = 262

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
 Frame = +2

Query: 38  VCSPAQTVTPTPPLPRDD---TARAAVPPPTGAPRSHRRRCCVAPL 166
           V SP     P PP+P      T   A P PT AP     +  + PL
Sbjct: 143 VYSPPPPALPPPPVPASTPAPTLARATPTPTSAPAVKSAKSSLPPL 188

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>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
 Frame = +2

Query: 80   PRDDTARAAVPPPTGAPRS-----HRRRCCVAPLP 169
            PR DT  A  P P GAP        RRR    PLP
Sbjct: 1473 PRGDTGPAGPPGPPGAPAELHGLRRRRRFVPVPLP 1507

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>SYNJ2_MOUSE (Q9D2G5) Synaptojanin-2 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 2)
          Length = 1434

 Score = 23.9 bits (50), Expect(2) = 6.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 23   EERNHVCSPAQTVTPTPPLPRDDT 94
            +E N    P  T TP PP+P+  T
Sbjct: 1211 QEMNLETPPPITATPIPPVPKPRT 1234



 Score = 22.3 bits (46), Expect(2) = 6.1
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 78   SPAMIPRVPPYRRQPA 125
            +P++ P+VPP R++ A
Sbjct: 1272 APSLAPKVPPRRKKSA 1287

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>NUDT4_RAT (Q99MY2) Diphosphoinositol polyphosphate phosphohydrolase 2 (EC|
           3.6.1.52) (DIPP-2) (rDIPP2) (Diadenosine
           5',5'''-P1,P6-hexaphosphate hydrolase 2) (EC 3.6.1.-)
           (Nucleoside diphosphate-linked moiety X motif 4) (Nudix
           motif 4)
          Length = 179

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 41  CSPAQTVTPTPPLPRDDTARAAVPPPTGAPRSHR 142
           CSP    +  P LP ++       PP+G P S R
Sbjct: 146 CSPTNGNSTVPSLPDNNALFVTAAPPSGVPSSIR 179

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>NUDT4_MOUSE (Q8R2U6) Diphosphoinositol polyphosphate phosphohydrolase 2 (EC|
           3.6.1.52) (DIPP-2) (Diadenosine
           5',5'''-P1,P6-hexaphosphate hydrolase 2) (EC 3.6.1.-)
           (Nucleoside diphosphate-linked moiety X motif 4) (Nudix
           motif 4)
          Length = 179

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 41  CSPAQTVTPTPPLPRDDTARAAVPPPTGAPRSHR 142
           CSP    +  P LP ++       PP+G P S R
Sbjct: 146 CSPTNGNSSVPSLPDNNALFVTAAPPSGVPSSIR 179

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>VINC_DROME (O46037) Vinculin|
          Length = 961

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 50  AQTVTPTPPLPRDDTARAAVPPP 118
           A+   P PPLPR+  A    PPP
Sbjct: 750 AERAPPRPPLPREGLAPVRPPPP 772

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>PR28_MYCTU (P0A5Q6) Proline-rich 28 kDa antigen precursor|
          Length = 310

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +2

Query: 50  AQTVTPTPPLPRDDTARAAVPPP---TGAPRSHRRRCCVAPLP 169
           A  + P PP+P   +A A VPP    T  P     R   AP P
Sbjct: 32  ADPLLPPPPIPAPVSAPATVPPVQNLTALPGGSSNRFSPAPAP 74

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>PR28_MYCBO (P0A5Q7) Proline-rich 28 kDa antigen precursor|
          Length = 310

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = +2

Query: 50  AQTVTPTPPLPRDDTARAAVPPP---TGAPRSHRRRCCVAPLP 169
           A  + P PP+P   +A A VPP    T  P     R   AP P
Sbjct: 32  ADPLLPPPPIPAPVSAPATVPPVQNLTALPGGSSNRFSPAPAP 74

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>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)|
           (DRF1) (mDIA1) (p140mDIA)
          Length = 1255

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +2

Query: 47  PAQTVTPTPPLPRDDTARAAVPPPTGAPRSHRRRCCVAPLPQ 172
           P   V P+PPLP        +PPP   P       C+ P PQ
Sbjct: 595 PGGVVPPSPPLP----PGTCIPPPPPLPGG----ACIPPPPQ 628

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>NCTR2_HUMAN (O95944) Natural cytotoxicity triggering receptor 2 precursor|
           (Natural killer cell p44-related protein) (NKp44)
           (NK-p44) (NK cell-activating receptor) (Lymphocyte
           antigen 95 homolog) (CD336 antigen)
          Length = 276

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
 Frame = +2

Query: 38  VCSPAQTVTPTPPLPRD----DTARAAVPPPTGAPRSHRRRCCVAPLPQE 175
           V SPA   T TP  PRD     T   +  PPT   R         P+P +
Sbjct: 128 VVSPASASTQTPWTPRDLVSSQTQTQSCVPPTAGARQAPESPSTIPVPSQ 177

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>R157_BOVIN (Q28183) Retina-specific 15.7 kDa protein|
          Length = 147

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +3

Query: 84  AMIPRVPPYRRQPAHLVLTDAVAAWHPFHKKP 179
           A + R  P  R+P H         WHPF  KP
Sbjct: 29  ASVGRCTPTFRKPFHTDSPSIQGQWHPFTNKP 60

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>CD8A_RAT (P07725) T-cell surface glycoprotein CD8 alpha chain precursor (CD8|
           antigen 32 kDa chain) (OX-8 membrane antigen) (CD8a
           antigen)
          Length = 236

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 68  TPPLPRDDTARAAVPPPTGAPRSHRRRCC 154
           T P+ R  T    VPPPTG PR  R   C
Sbjct: 144 TKPVTRAPTP---VPPPTGTPRPLRPEAC 169

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>Y2729_BURPS (Q93SM8) UPF0226 protein BPSL2729|
          Length = 407

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -2

Query: 357 GRCCD-LRPTARFLRGAGACGAQATGMILRYQLRR 256
           GRC D L P    LRG  ACGA    ++  +   R
Sbjct: 77  GRCADTLGPKRTVLRGLAACGASGALLLSAFAFAR 111

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>TM55A_BOVIN (Q3SZ48) Transmembrane protein 55A (EC 3.1.3.-) (Type II|
           phosphatidylinositol 4,5-bisphosphate 4-phosphatase)
           (PtdIns-4,5-P2 4-Ptase II)
          Length = 257

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
 Frame = +2

Query: 23  EERNHVCSPAQT--VTPT-PPLPRDDTARAAVPPP 118
           +ER+ + S + +  VTPT PP  +D + RA +PPP
Sbjct: 7   DERSPLLSASHSGSVTPTAPPYLQDSSPRAELPPP 41

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>UNG_EHV1V (P69859) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 312

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
 Frame = +3

Query: 9   PNEIGRSATTFAPQLKP*HRRRPSPAMIPRVPPYRRQPAHL----VLTDAVAAWHPFHKK 176
           P E G +++T   ++ P     P+P      PP RR+P  L     L +   + HP    
Sbjct: 21  PEENGSNSSTPTSEIGPACVVSPAPGETGAPPPKRRRPCGLPQGVALINTSVSTHPLFTT 80

Query: 177 PCLS 188
            C S
Sbjct: 81  SCQS 84

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>UNG_EHV1B (P28866) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 312

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
 Frame = +3

Query: 9   PNEIGRSATTFAPQLKP*HRRRPSPAMIPRVPPYRRQPAHL----VLTDAVAAWHPFHKK 176
           P E G +++T   ++ P     P+P      PP RR+P  L     L +   + HP    
Sbjct: 21  PEENGSNSSTPTSEIGPACVVSPAPGETGAPPPKRRRPCGLPQGVALINTSVSTHPLFTT 80

Query: 177 PCLS 188
            C S
Sbjct: 81  SCQS 84

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>SPRI_DROME (Q8MQW8) Protein sprint (SH2 poly-proline-containing Ras-interactor|
           protein)
          Length = 1790

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +3

Query: 33  TTFAPQLKP*HRRRPSPAMIPRVPPYRRQP 122
           TT A QL+   RRR +P  +PR PP R +P
Sbjct: 141 TTTANQLQQQQRRRVAPKPLPR-PPRRTRP 169

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>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
          Length = 646

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 47  PAQTVTPTPPLPRDDTARAAVPPPTGAPRS 136
           PA    P PP+P   T     PPP   P+S
Sbjct: 489 PAPPAPPAPPVPVSSTKVNKFPPPPKFPQS 518

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>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)|
          Length = 3164

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 20   REERNHVCSPAQTVTPTPPLPRDDTARAAVPPPTGAP 130
            RE R  V  PA++  P P  PRDD  R   P  + AP
Sbjct: 2624 REARPGV--PAESTRPAPVGPRDDFRRLPSPQSSPAP 2658

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 36  TFAPQLKP*HRRRPSPAMIPRVPPYRRQP 122
           +++P+ +P  RRRPSP    R PP R  P
Sbjct: 306 SYSPRRRPSPRRRPSPRR--RTPPRRMPP 332

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>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast precursor|
          Length = 1783

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +2

Query: 65   PTPPLPRDDTARAAVPPPTGAPRSHRRRCCVAPLPQEA 178
            PTPP P    A A+      APR+   R   AP P EA
Sbjct: 920  PTPPPPPASAAAAST-----APRAAESRPAAAPAPAEA 952

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>ZYX_CHICK (Q04584) Zyxin|
          Length = 542

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 47  PAQTVTPTPPLPRDDTARAAVPPPTGAPRS 136
           P  +V P P LP   TA+   PP   +P S
Sbjct: 208 PLASVPPPPSLPSQPTAKFTPPPVASSPGS 237

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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 36  TFAPQLKP*HRRRPSPAMIPRVPPYRRQP 122
           +++P+ +P  RRRPSP    R PP R  P
Sbjct: 308 SYSPRRRPSPRRRPSPRR--RTPPRRMPP 334

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>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 36  TFAPQLKP*HRRRPSPAMIPRVPPYRRQP 122
           +++P+ +P  RRRPSP    R PP R  P
Sbjct: 308 SYSPRRRPSPRRRPSPRR--RTPPRRMPP 334

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>MSL5_YEAST (Q12186) Branchpoint-bridging protein MSL5 (MUD synthesis lethal 5|
           protein)
          Length = 476

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
 Frame = +2

Query: 32  NHVCSPAQTVTPTPPLPRDDTARA------AVPPPTGAPRSHRRRCCVAPLP 169
           +H+   AQ VTPTPP     ++ +      A PP    P S + +  + P P
Sbjct: 382 SHISRQAQNVTPTPPPGLTSSSFSSGVPGIAPPPLQSPPESEQPKFSLPPPP 433

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>KS6B2_HUMAN (Q9UBS0) Ribosomal protein S6 kinase beta-2 (EC 2.7.11.1) (S6K2)|
           (70 kDa ribosomal protein S6 kinase 2) (p70-S6KB) (p70
           ribosomal S6 kinase beta) (p70 S6Kbeta) (p70 S6 kinase
           beta) (S6K-beta) (p70-beta) (S6 kinase-related kinase)
           (SRK) (Serin
          Length = 482

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +2

Query: 47  PAQTVTPTPPL----PRDDTARAAVPPPTGAPRSHRRR 148
           P  T  P PPL    P   TA   + PP+G  +S R R
Sbjct: 440 PEPTELPLPPLLPPPPPSTTAPLPIRPPSGTKKSKRGR 477

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>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 62  TPTPPLPRDDTARAAVPPPTGAP 130
           +PTPPLP    +    PPPT  P
Sbjct: 327 SPTPPLPSPGRSGPLPPPPTERP 349

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>PKN6_MYXXA (P54738) Serine/threonine-protein kinase pkn6 (EC 2.7.11.1)|
          Length = 710

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 17  DREERNHVCSPAQTVTPTPPLPRDDTARAAVPPPTGAP 130
           D    + V  P  + +PT P+PR   A   VP  + +P
Sbjct: 327 DARSASMVSPPVDSTSPTTPMPRSLVAPVEVPADSTSP 364

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>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
 Frame = +2

Query: 47  PAQTVTPTPPLPRDDTA----RAAVPPPTGAPR 133
           PA+   PTP  PR   A    RAAV PP+  PR
Sbjct: 44  PAKNTGPTPSEPRLALAPVGPRAAVSPPSERPR 76

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>NCOA2_RAT (Q9WUI9) Nuclear receptor coactivator 2 (NCoA-2) (Transcriptional|
           intermediary factor 2)
          Length = 1465

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3

Query: 51  LKP*HRRRPSPAMIPRVPPYRRQPA 125
           L P HR  P  A  PRVPP +  PA
Sbjct: 486 LSPRHRMSPGVAGSPRVPPSQFSPA 510

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>DMI1L_ORYSA (Q75LD5) Putative ion channel DMI1-like, chloroplast precursor|
          Length = 893

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
 Frame = +2

Query: 47  PAQTVTPTP------PLPRDDTARAAVPPPTGAPRSHRRR 148
           P +   PTP      PLP  +  +   PPPT  P + RRR
Sbjct: 50  PDRRPPPTPRSRSRSPLPPPEQQKQQQPPPTTPPPAPRRR 89

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>F100A_HUMAN (Q8TB05) Protein FAM100A|
          Length = 177

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +2

Query: 62  TPTPPLPRDDTARAAVPPPTGAPRSH 139
           TPTPP P  D    A    T  PR+H
Sbjct: 145 TPTPPSPASDWPPLAPQQATSEPRAH 170


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,487,398
Number of Sequences: 219361
Number of extensions: 854968
Number of successful extensions: 4489
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 3755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4423
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result