Clone Name | bart52h10 |
---|---|
Clone Library Name | barley_pub |
>Y5621_ARATH (O81488) PHD finger protein At5g26210| Length = 255 Score = 150 bits (379), Expect = 1e-36 Identities = 67/94 (71%), Positives = 79/94 (84%) Frame = +2 Query: 131 PRTVEDIFKDYRARRNAIHRALTHDVEEFYAQCDPEKENLCLYGYANEAWEVALPAEEVP 310 PRTVE++F+D++ RR + +ALT DV+EF+ CDPEKENLCLYG+ NE WEV LPAEEVP Sbjct: 9 PRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNLPAEEVP 68 Query: 311 TELPEPALGINFARDGMKRSDWLALVAVHSDSWL 412 ELPEP LGINFARDGM DWL+LVAVHSD+WL Sbjct: 69 PELPEPVLGINFARDGMAEKDWLSLVAVHSDAWL 102
>ARLC_MAIZE (P13526) Anthocyanin regulatory Lc protein| Length = 610 Score = 31.6 bits (70), Expect = 0.76 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +2 Query: 194 LTHDVEEFYAQCDPEKENLCLYGYANEAWEVALPAEEVPTELPEPA 331 +T ++EEFY+ CD E + L + W V EVP P+PA Sbjct: 282 ITKEIEEFYSLCD-EMDLQALPLPLEDGWTVDASNFEVPCSSPQPA 326
>ARRS_MAIZE (P13027) Anthocyanin regulatory R-S protein| Length = 612 Score = 31.6 bits (70), Expect = 0.76 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +2 Query: 194 LTHDVEEFYAQCDPEKENLCLYGYANEAWEVALPAEEVPTELPEPA 331 +T ++EEFY+ CD E + L + W V EVP P+PA Sbjct: 287 ITKEIEEFYSLCD-EMDLQALPLPLEDGWTVDASNFEVPCSSPQPA 331
>PRPH_MESAU (P06680) Acidic proline-rich protein HP43A precursor| Length = 183 Score = 30.4 bits (67), Expect = 1.7 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +3 Query: 9 DQSSPLSLPRLAGDHERRRPPSPG 80 D ++P P+ GDH++ RPP PG Sbjct: 63 DGNAPEGPPQQGGDHQKPRPPKPG 86
>ATG11_NEUCR (Q7S055) Autophagy-related protein 11| Length = 1300 Score = 30.0 bits (66), Expect = 2.2 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 272 EAWEVALPAEEVPTELPEPALGI 340 + WE PA++VPTELP+ GI Sbjct: 685 DIWECLAPADDVPTELPDLLEGI 707
>BAG1_HUMAN (Q99933) BAG family molecular chaperone regulator 1 (BCL-2-binding| athanogene-1) (BAG-1) (Glucocorticoid receptor-associated protein RAP46) Length = 274 Score = 28.9 bits (63), Expect = 4.9 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +2 Query: 152 FKDYRARRNAIHRALTHDVEEFYAQCDPEKENLC 253 FKD R +R + L V+ F A+CD ++N+C Sbjct: 230 FKDSRLKR----KGLVKKVQAFLAECDTVEQNIC 259
>ETV2_MOUSE (P41163) ETS translocation variant 2 (Ets-related protein 71)| Length = 335 Score = 28.5 bits (62), Expect = 6.4 Identities = 17/53 (32%), Positives = 23/53 (43%) Frame = +2 Query: 251 CLYGYANEAWEVALPAEEVPTELPEPALGINFARDGMKRSDWLALVAVHSDSW 409 C G+ W ALP E+VP + A + ++R DW L SD W Sbjct: 50 CWKGFPELDWNPALPHEDVPFQAEPVAHPLPWSR------DWTDLGCNTSDPW 96
>FDHA_DESGI (Q934F5) Formate dehydrogenase alpha subunit precursor (EC 1.2.1.2)| (FDH alpha subunit) (Formate dehydrogenase large subunit) Length = 1012 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 6/76 (7%) Frame = +2 Query: 200 HDVEEFYAQCDPEKENLCLYGYANEAWEVALPAEEVPTEL-PEPALGINFARD-----GM 361 H E A CDP +C E W+ L P L EP + + + G+ Sbjct: 870 HFATEEKAVCDPRYPFICSTYRVTEHWQTGLMTRNTPWLLEAEPQMFCEMSEELATLRGI 929 Query: 362 KRSDWLALVAVHSDSW 409 K D + L +V W Sbjct: 930 KNGDKVILESVRGKLW 945 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,317,390 Number of Sequences: 219361 Number of extensions: 414645 Number of successful extensions: 1312 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1300 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1312 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)