ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart52h08 |
|---|---|
| Clone Library Name | barley_pub |
>LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like protein 2)| Length = 483 Score = 157 bits (397), Expect = 1e-38 Identities = 75/94 (79%), Positives = 82/94 (87%) Frame = +1 Query: 145 EKAPGTIGVGRYEEMEQDGAPSTAKSRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYS 324 EKA T+ VG Y EME+DG KS+LS + WHGGSAYDAWFSCASNQVAQVLLTLPYS Sbjct: 5 EKAAETVVVGNYVEMEKDGKALDIKSKLSDMFWHGGSAYDAWFSCASNQVAQVLLTLPYS 64 Query: 325 FSQLGMVSGILFQLFYGLMGSWTAYLISILYVEY 426 FSQLGM+SGILFQLFYG++GSWTAYLISILYVEY Sbjct: 65 FSQLGMLSGILFQLFYGILGSWTAYLISILYVEY 98
>LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like protein 5)| (MtLAX5) Length = 490 Score = 155 bits (392), Expect = 4e-38 Identities = 75/98 (76%), Positives = 84/98 (85%), Gaps = 1/98 (1%) Frame = +1 Query: 136 LADEKAPGTIGVGRYEEMEQDGAP-STAKSRLSGLLWHGGSAYDAWFSCASNQVAQVLLT 312 +A++K T+ VG Y EME +G P KS+LS LWHGGSAYDAWFSCASNQVAQVLLT Sbjct: 3 MANDKVAETVIVGNYVEMESEGKPPQDIKSKLSNFLWHGGSAYDAWFSCASNQVAQVLLT 62 Query: 313 LPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEY 426 LPYSFSQLGM+SGILFQLFYG++GSWTAYLISILYVEY Sbjct: 63 LPYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEY 100
>LAX3_ORYSA (Q7XGU4) Auxin transporter-like protein 3| Length = 547 Score = 150 bits (378), Expect = 2e-36 Identities = 76/117 (64%), Positives = 87/117 (74%), Gaps = 13/117 (11%) Frame = +1 Query: 115 AAAANDGLADEKAPGTI------------GVGRYEEMEQD-GAPSTAKSRLSGLLWHGGS 255 + ++ G ADEK PG G G EE + G + A++RLSGLLWHGGS Sbjct: 3 SGSSGGGYADEKGPGAATMQALGLQQQHGGGGEVEEESSEMGEKTAARTRLSGLLWHGGS 62 Query: 256 AYDAWFSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEY 426 AYDAWFSCASNQVAQVLLTLPYSF+QLGM SG+LFQLFYGL+GSWTAYLISILY+EY Sbjct: 63 AYDAWFSCASNQVAQVLLTLPYSFAQLGMASGLLFQLFYGLLGSWTAYLISILYLEY 119
>LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like protein 3)| Length = 470 Score = 142 bits (359), Expect = 3e-34 Identities = 69/95 (72%), Positives = 77/95 (81%), Gaps = 6/95 (6%) Frame = +1 Query: 160 TIGVGRYEEMEQD------GAPSTAKSRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPY 321 T+ G Y EME++ S+ K++LS WHGGS YDAWFSCASNQVAQVLLTLPY Sbjct: 8 TVVAGNYLEMEREEENISGNKKSSTKTKLSNFFWHGGSVYDAWFSCASNQVAQVLLTLPY 67 Query: 322 SFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEY 426 SFSQLGM+SGILFQLFYGLMGSWTAYLIS+LYVEY Sbjct: 68 SFSQLGMMSGILFQLFYGLMGSWTAYLISVLYVEY 102
>LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like protein 3)| (MtLAX3) Length = 465 Score = 140 bits (352), Expect = 2e-33 Identities = 68/91 (74%), Positives = 77/91 (84%), Gaps = 2/91 (2%) Frame = +1 Query: 160 TIGVGRYEEME--QDGAPSTAKSRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQ 333 T+ G Y EME ++G+ ST +LS WHGGS YDAWFSCASNQVAQVLLTLPYSFSQ Sbjct: 8 TVVAGNYLEMEREEEGSKSTT-GKLSKFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQ 66 Query: 334 LGMVSGILFQLFYGLMGSWTAYLISILYVEY 426 LGM+SGILFQ+FYGLMGSWTAY+IS+LYVEY Sbjct: 67 LGMLSGILFQIFYGLMGSWTAYIISVLYVEY 97
>LAX4_ORYSA (Q53JG7) Putative auxin transporter-like protein 4| Length = 480 Score = 138 bits (347), Expect = 6e-33 Identities = 71/112 (63%), Positives = 79/112 (70%), Gaps = 15/112 (13%) Frame = +1 Query: 136 LADEKAPGTIGVGRYEEMEQDGAPSTA---------------KSRLSGLLWHGGSAYDAW 270 +A EK TI G Y EME++GA + K +S L WHGGS YDAW Sbjct: 1 MASEKVE-TIVAGNYVEMEREGAATAGEGVGGAAAASGRRRGKLAVSSLFWHGGSVYDAW 59 Query: 271 FSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEY 426 FSCASNQVAQVLLTLPYSFSQLGM SG+ FQ+FYGLMGSWTAYLIS+LYVEY Sbjct: 60 FSCASNQVAQVLLTLPYSFSQLGMASGVAFQVFYGLMGSWTAYLISVLYVEY 111
>LAX1_MEDTR (Q9FEL8) Auxin transporter-like protein 1 (AUX1-like protein 1)| (MtLAX1) Length = 479 Score = 135 bits (341), Expect = 3e-32 Identities = 70/113 (61%), Positives = 79/113 (69%) Frame = +1 Query: 88 SSKSSRVTMAAAANDGLADEKAPGTIGVGRYEEMEQDGAPSTAKSRLSGLLWHGGSAYDA 267 S K TM ++ N+ TI + E E+ +P S LWHGGS YDA Sbjct: 3 SEKQGEETMMSSLNE---------TIELNEEREEEKGASPG---SGFKNFLWHGGSVYDA 50 Query: 268 WFSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEY 426 WFSCASNQVAQVLLTLPYSFSQLGM+SGI+FQ+FYGLMGSWTAYLISILYVEY Sbjct: 51 WFSCASNQVAQVLLTLPYSFSQLGMISGIIFQVFYGLMGSWTAYLISILYVEY 103
>LAX1_ORYSA (Q5N892) Auxin transporter-like protein 1| Length = 492 Score = 134 bits (338), Expect = 7e-32 Identities = 66/103 (64%), Positives = 73/103 (70%) Frame = +1 Query: 118 AAANDGLADEKAPGTIGVGRYEEMEQDGAPSTAKSRLSGLLWHGGSAYDAWFSCASNQVA 297 A D E+ G +GV E D K + LLWHGGS +DAWFSCASNQVA Sbjct: 10 AIVADSNGKEEEVGVMGVSAGEHGADDHHGGGGKFSMKNLLWHGGSVWDAWFSCASNQVA 69 Query: 298 QVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEY 426 QVLLTLPYSFSQLGM+SG+L QLFYG MGSWTAYLIS+LYVEY Sbjct: 70 QVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEY 112
>LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2| Length = 482 Score = 131 bits (330), Expect = 6e-31 Identities = 67/104 (64%), Positives = 78/104 (75%) Frame = +1 Query: 115 AAAANDGLADEKAPGTIGVGRYEEMEQDGAPSTAKSRLSGLLWHGGSAYDAWFSCASNQV 294 A A+ G + + +GV EQDG K ++ LLWHGGS +DAWFSCASNQV Sbjct: 11 AIVADAGKEEAEVRAAMGV------EQDG-----KFSMTSLLWHGGSVWDAWFSCASNQV 59 Query: 295 AQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEY 426 AQVLLTLPYSFSQLGM+SG+L Q+FYGLMGSWTAYLIS+LYVEY Sbjct: 60 AQVLLTLPYSFSQLGMLSGLLLQVFYGLMGSWTAYLISVLYVEY 103
>AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx carrier protein| 1) (Polar auxin transport inhibitor resistant protein 1) Length = 485 Score = 131 bits (329), Expect = 8e-31 Identities = 67/104 (64%), Positives = 76/104 (73%) Frame = +1 Query: 115 AAAANDGLADEKAPGTIGVGRYEEMEQDGAPSTAKSRLSGLLWHGGSAYDAWFSCASNQV 294 A AND D+ G + E DG+ S LS LWHGGS +DAWFSCASNQV Sbjct: 7 AIVANDNGTDQVNGNRTGK---DNEEHDGSTG---SNLSNFLWHGGSVWDAWFSCASNQV 60 Query: 295 AQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEY 426 AQVLLTLPYSFSQLGM+SGI+ Q+FYGL+GSWTAYLIS+LYVEY Sbjct: 61 AQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYLISVLYVEY 104
>LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like protein 4)| (MtLAX4) Length = 482 Score = 129 bits (323), Expect = 4e-30 Identities = 63/87 (72%), Positives = 71/87 (81%) Frame = +1 Query: 166 GVGRYEEMEQDGAPSTAKSRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMV 345 G EE+ +D + KS LWHGGS +DAWFSCASNQVAQVLLTLPYSFSQLGMV Sbjct: 22 GGSSLEEIAEDQSMFNFKS----FLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMV 77 Query: 346 SGILFQLFYGLMGSWTAYLISILYVEY 426 SGI+FQ+FYGL+GSWTAYLIS+LYVEY Sbjct: 78 SGIVFQIFYGLIGSWTAYLISVLYVEY 104
>LAX1_ARATH (Q9LFB2) Auxin transporter-like protein 1 (AUX1-like protein 1)| Length = 488 Score = 128 bits (322), Expect = 5e-30 Identities = 66/111 (59%), Positives = 78/111 (70%) Frame = +1 Query: 94 KSSRVTMAAAANDGLADEKAPGTIGVGRYEEMEQDGAPSTAKSRLSGLLWHGGSAYDAWF 273 K + ++ + D +A K + E + DG S + LWHGGSA+DAWF Sbjct: 5 KQAEESIVVSGEDEVAGRKVEDSAA-----EEDIDGNGGNGFS-MKSFLWHGGSAWDAWF 58 Query: 274 SCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEY 426 SCASNQVAQVLLTLPYSFSQLGM+SGIL Q+FYGLMGSWTAYLIS+LYVEY Sbjct: 59 SCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGLMGSWTAYLISVLYVEY 109
>LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like protein 2)| (MtLAX2) Length = 484 Score = 127 bits (318), Expect = 1e-29 Identities = 61/86 (70%), Positives = 69/86 (80%) Frame = +1 Query: 169 VGRYEEMEQDGAPSTAKSRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMVS 348 VGR EE+E + LWHGGS +DAWFSCASNQVAQVLLTLPYSFSQLGM+S Sbjct: 25 VGREEEVEDHSFS------VKNFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLS 78 Query: 349 GILFQLFYGLMGSWTAYLISILYVEY 426 GIL Q+FYG++GSWTAYLIS+LYVEY Sbjct: 79 GILLQVFYGILGSWTAYLISVLYVEY 104
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 32.0 bits (71), Expect = 0.62 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%) Frame = +3 Query: 24 ARSINKAQLESTSRTRR---RHYTQFEEQSSDHGRSSQR 131 +RS ++++ ES SR+RR RHYT+ +S H RS R Sbjct: 46 SRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSR 84
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 32.0 bits (71), Expect = 0.62 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%) Frame = +3 Query: 24 ARSINKAQLESTSRTRR---RHYTQFEEQSSDHGRSSQR 131 +RS ++++ ES SR+RR RHYT+ +S H RS R Sbjct: 46 SRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSR 84
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 32.0 bits (71), Expect = 0.62 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%) Frame = +3 Query: 24 ARSINKAQLESTSRTRR---RHYTQFEEQSSDHGRSSQR 131 +RS ++++ ES SR+RR RHYT+ +S H RS R Sbjct: 46 SRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSR 84
>MTR_NEUCR (P38680) N amino acid transport system protein (Methyltryptophan| resistance protein) Length = 470 Score = 31.6 bits (70), Expect = 0.81 Identities = 14/33 (42%), Positives = 24/33 (72%) Frame = +1 Query: 307 LTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLI 405 L+LP +F+ LGMV G++ + GL+ +TA++I Sbjct: 72 LSLPGAFATLGMVPGVILSVGMGLICIYTAHVI 104
>YSPK_CAEEL (Q19425) Hypothetical protein F13H10.3 in chromosome IV| Length = 615 Score = 31.6 bits (70), Expect = 0.81 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = +1 Query: 271 FSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLI 405 FS + + LL +P++ Q G+V GI+ L + +TAY++ Sbjct: 170 FSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIV 214
>ATG22_CRYNE (Q5KFW2) Autophagy-related protein 22| Length = 546 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +1 Query: 298 QVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYV 420 ++LLT YS G +SGILF LF L +WT + +IL + Sbjct: 88 RLLLTFAYS----GSLSGILFLLFPPLPYAWTPIMAAILNI 124
>VGLH_PRVN3 (Q00660) Glycoprotein H precursor| Length = 686 Score = 30.8 bits (68), Expect = 1.4 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 6/76 (7%) Frame = +1 Query: 52 SLPQELGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGV--GRYEEMEQD----GAPST 213 SL ++LGGD T ++ + AAA LA APG G EE E+D AP Sbjct: 442 SLRRDLGGDATLAN------LGAAARLALAPAGAPGAAAATDGGAEEEEEDPVARAAPEI 495 Query: 214 AKSRLSGLLWHGGSAY 261 L L GG+++ Sbjct: 496 PAEALLALPLRGGASF 511
>COBB_BACHD (Q9KBM8) Cobyrinic acid A,C-diamide synthase| Length = 465 Score = 30.4 bits (67), Expect = 1.8 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -2 Query: 399 VGGPAPHEAVEELEQYAAHHPQLREGVGQG 310 +GG P E +EL Q+ HPQL++ V G Sbjct: 296 LGGGFPEEFADELSQWIKDHPQLKKRVQSG 325
>PNS1_CRYNE (Q5KQ32) Protein PNS1| Length = 551 Score = 30.0 bits (66), Expect = 2.4 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = +1 Query: 241 WHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMVSG--ILFQLFYGLMGSWTAY 399 W GSA + C+S++VA ++ +S+ L V G IL L G+ G W Y Sbjct: 274 WTPGSAACSDGGCSSSKVAGLVFYATFSYLWLSQVIGNVILCTLAGGVFGGWYYY 328
>CS029_MOUSE (Q9CS00) Protein C19orf29 homolog| Length = 772 Score = 30.0 bits (66), Expect = 2.4 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +3 Query: 15 GLTARSINKAQLESTSRTRRRHYTQFEEQSSDHGRSSQR 131 G RS ++ + S SR+R R ++ +S HGRSS+R Sbjct: 23 GRKQRSRSRGRSRSRSRSRSRSRSRSRSRSRSHGRSSRR 61
>ODO1_STAES (Q8CP83) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 934 Score = 29.6 bits (65), Expect = 3.1 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = +1 Query: 49 SSLPQELGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAKS 222 S + LGG T +S ++ A N + AP G R + Q GAPST Sbjct: 290 SDVKYHLGGVKTTNSYGIEQRISLANNPSHLEIVAPVVAGKTRAAQDNTHQVGAPSTDFH 349 Query: 223 RLSGLLWHGGSAY 261 + ++ HG +AY Sbjct: 350 KAMPIIIHGDAAY 362
>HIS8_THEFY (Q47QS8) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 367 Score = 29.3 bits (64), Expect = 4.0 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +1 Query: 151 APGTIGVGRYEEMEQDGAPSTAKSRLSGLLWHGGSAYDAWFSCASNQVAQVLL 309 A +G+ RY + E + + L+ L HG A + W + SN++ Q +L Sbjct: 59 AEAAVGLNRYPDREA----TALRQALADYLGHGVDAANVWAANGSNEILQQIL 107
>DNAE2_CORDI (Q6NJ04) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1039 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +1 Query: 97 SSRVTMAAAANDGLADEKAPGTIGVGRYEEMEQDGAPSTAKSRL 228 S R + A + LA A T+GVGR + + Q GA +T K+ + Sbjct: 845 SRRAGLGVAVIEALARSGALETLGVGRRQALWQAGAAATEKAAM 888
>AVT2_YEAST (P39981) Vacuolar amino acid transporter 2| Length = 480 Score = 29.3 bits (64), Expect = 4.0 Identities = 13/49 (26%), Positives = 27/49 (55%) Frame = +1 Query: 265 AWFSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISI 411 A+ + A++ + ++T P++ G++ G+L + G + WT LI I Sbjct: 72 AFMNLANSILGAGIITQPFAIKNAGILGGLLSYVALGFIVDWTLRLIVI 120
>ODO1_STAAW (Q8NWR6) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 932 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +1 Query: 67 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAKSRLSGLL 240 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 293 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 352 Query: 241 WHGGSAY 261 HG +AY Sbjct: 353 IHGDAAY 359
>ODO1_STAAU (Q7WRM3) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 932 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +1 Query: 67 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAKSRLSGLL 240 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 293 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 352 Query: 241 WHGGSAY 261 HG +AY Sbjct: 353 IHGDAAY 359
>ODO1_STAAS (Q6G9E8) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 932 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +1 Query: 67 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAKSRLSGLL 240 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 293 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 352 Query: 241 WHGGSAY 261 HG +AY Sbjct: 353 IHGDAAY 359
>ODO1_STAAR (Q6GGZ5) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 932 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +1 Query: 67 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAKSRLSGLL 240 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 293 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 352 Query: 241 WHGGSAY 261 HG +AY Sbjct: 353 IHGDAAY 359
>ODO1_STAAM (Q931R8) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 932 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +1 Query: 67 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAKSRLSGLL 240 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 293 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 352 Query: 241 WHGGSAY 261 HG +AY Sbjct: 353 IHGDAAY 359
>ODO1_STAAC (Q5HG06) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 932 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +1 Query: 67 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAKSRLSGLL 240 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 293 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 352 Query: 241 WHGGSAY 261 HG +AY Sbjct: 353 IHGDAAY 359
>EME1_ASHGO (Q75B88) Crossover junction endonuclease EME1 (EC 3.1.22.-)| Length = 714 Score = 28.9 bits (63), Expect = 5.3 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +1 Query: 46 NSSLPQELGGDTTPSSKSSRVTMAAAANDG 135 N+ L ELGG+++PS ++ + A +NDG Sbjct: 219 NNILSSELGGESSPSLQALTTPLPAKSNDG 248
>ODO1_STAAN (Q99U74) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 910 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +1 Query: 67 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAKSRLSGLL 240 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 271 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 330 Query: 241 WHGGSAY 261 HG +AY Sbjct: 331 IHGDAAY 337
>MRS2_ASPFU (Q4WCV3) Inner membrane magnesium transporter mrs2, mitochondrial| precursor (RNA-splicing protein mrs2) Length = 597 Score = 28.9 bits (63), Expect = 5.3 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +1 Query: 283 SNQVAQVLLTLPYSFSQLGMVSGILFQLFYGL 378 +N+ + +LL L +S LG+ +G LF YG+ Sbjct: 418 ANRNSLMLLDLKFSIGTLGLATGTLFSALYGM 449
>LEP4_SYNY3 (P72640) Type 4 prepilin-like proteins leader peptide-processing| enzyme [Includes: Leader peptidase (EC 3.4.23.43) (Prepilin peptidase); N-methyltransferase (EC 2.1.1.-)] Length = 269 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +1 Query: 307 LTLPYSFSQLGMVSGILFQLFYGLM-GSWTAYLISIL 414 +TLP S ++ G+V G+LF L G G W L+ + Sbjct: 125 MTLPNSLTKPGLVLGLLFHLLLGWQRGHWIVPLVEAI 161
>ABDA_DROME (P29555) Homeobox protein abdominal-A| Length = 590 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -2 Query: 393 GPAPHEAVEELEQYAAHHPQLREGVGQGQEHLGH 292 G +PH V + HHPQ++ Q+HL H Sbjct: 108 GQSPHSPVSSSSPFQQHHPQVQ------QQHLNH 135
>VGNM_CPSMV (P31630) Genome polyprotein M (RNA2 polyprotein) [Contains: Movement| protein (MP); Large coat protein (LCP) (Coat protein VP37); Small coat protein (SCP) (Coat protein VP23)] Length = 1002 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +1 Query: 259 YDAWFSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSW 390 ++ W S SNQ +L F+ G +F++FY L SW Sbjct: 936 FEMWRSSWSNQTTWIL-----EFTVAGASQSAIFEIFYRLDNSW 974
>YQ55_CAEEL (Q09251) Hypothetical RING finger protein C16C10.5 in chromosome| III Length = 409 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -2 Query: 423 LHVEDADEVGGPAPHEAVEELEQYAAHHPQLREGVGQGQEHLGH 292 + +++ + G P PHE EE EQ+A H ++ E +H GH Sbjct: 81 IRLQNEVQEGMPPPHELTEE-EQWAEEHRKMHE------KHKGH 117
>HOXM_AZOVI (P40591) Hydrogenase expression/formation protein hoxM| Length = 207 Score = 28.1 bits (61), Expect = 9.0 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +1 Query: 112 MAAAANDGLADEKAPGTIGVGRYE 183 + AAA DG A+ AP + +GRYE Sbjct: 158 VVAAARDGDAERLAPAPLALGRYE 181
>TRPE_MYCLE (Q9X7C5) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 529 Score = 28.1 bits (61), Expect = 9.0 Identities = 20/83 (24%), Positives = 37/83 (44%) Frame = +1 Query: 31 RSTKHNSSLPQELGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGRYEEMEQDGAPS 210 ++ + + L +EL D ++ + + + L PGT+ V Y +E+ Sbjct: 327 QTEEEDQLLEKELLADE--KERAEHLMLVDLGRNDLGRVCTPGTVRVEDYSHVERYSHVM 384 Query: 211 TAKSRLSGLLWHGGSAYDAWFSC 279 S ++GLL G +A DA +C Sbjct: 385 HMVSTVTGLLGEGRTALDAVTAC 407
>ODO1_STAEQ (Q5HPC6) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 934 Score = 28.1 bits (61), Expect = 9.0 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Frame = +1 Query: 49 SSLPQELGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAKS 222 S + LGG T +S ++ A N + AP G R + Q G PST Sbjct: 290 SDVKYHLGGVKTTNSYGIEQRISLANNPSHLEIVAPVVAGKTRAAQDNTHQVGGPSTDFH 349 Query: 223 RLSGLLWHGGSAY 261 + ++ HG +AY Sbjct: 350 KAMPIIIHGDAAY 362 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,263,086 Number of Sequences: 219361 Number of extensions: 969963 Number of successful extensions: 3602 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 3511 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3599 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
