ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart52h04 |
|---|---|
| Clone Library Name | barley_pub |
>XTH8_ORYSA (Q76BW5) Xyloglucan endotransglycosylase/hydrolase protein 8| precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5) Length = 290 Score = 53.5 bits (127), Expect = 1e-07 Identities = 25/29 (86%), Positives = 27/29 (93%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSG 402 YL+G+FSVQMKLV GNSAGTV SFYLSSG Sbjct: 71 YLFGEFSVQMKLVGGNSAGTVTSFYLSSG 99
>XTH20_ARATH (Q9FI31) Probable xyloglucan endotransglucosylase/hydrolase protein| 20 precursor (EC 2.4.1.207) (At-XTH20) (XTH-20) Length = 282 Score = 47.4 bits (111), Expect = 8e-06 Identities = 21/28 (75%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 +LYG+ VQMKLVPGNSAGTV +FYL S Sbjct: 70 FLYGKVEVQMKLVPGNSAGTVTTFYLKS 97
>XTHA_PHAAN (Q41638) Xyloglucan endotransglucosylase/hydrolase protein A| precursor (EC 2.4.1.207) (VaXTH1) Length = 292 Score = 47.4 bits (111), Expect = 8e-06 Identities = 21/30 (70%), Positives = 26/30 (86%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSGN 405 YL+G FS+ +KLVPG+SAGTV +FYLSS N Sbjct: 71 YLFGHFSMYIKLVPGDSAGTVTAFYLSSTN 100
>XTH19_ARATH (Q9M0D1) Probable xyloglucan endotransglucosylase/hydrolase protein| 19 precursor (EC 2.4.1.207) (At-XTH19) (XTH-19) Length = 277 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/28 (75%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 +LYG+ VQMKLVPGNSAGTV +FYL S Sbjct: 65 FLYGKAEVQMKLVPGNSAGTVTTFYLKS 92
>XTH18_ARATH (Q9M0D2) Probable xyloglucan endotransglucosylase/hydrolase protein| 18 precursor (EC 2.4.1.207) (At-XTH18) (XTH-18) Length = 282 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/28 (75%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 +LYG+ VQMKLVPGNSAGTV +FYL S Sbjct: 70 FLYGKAEVQMKLVPGNSAGTVTTFYLKS 97
>XTH17_ARATH (O80803) Probable xyloglucan endotransglucosylase/hydrolase protein| 17 precursor (EC 2.4.1.207) (At-XTH17) (XTH-17) Length = 282 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/28 (75%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 +LYG+ VQMKLVPGNSAGTV +FYL S Sbjct: 70 FLYGKAEVQMKLVPGNSAGTVTTFYLKS 97
>XTH_SOYBN (Q39857) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) (Fragment) Length = 295 Score = 46.6 bits (109), Expect = 1e-05 Identities = 20/30 (66%), Positives = 26/30 (86%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSGN 405 YL+G FS+ +K+VPG+SAGTV +FYLSS N Sbjct: 73 YLFGHFSMYIKMVPGDSAGTVTAFYLSSQN 102
>XTH16_ARATH (Q8LG58) Probable xyloglucan endotransglucosylase/hydrolase protein| 16 precursor (EC 2.4.1.207) (At-XTH16) (XTH-16) Length = 291 Score = 42.7 bits (99), Expect(2) = 2e-05 Identities = 18/28 (64%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ +Q+KLV GNSAGTV ++YLSS Sbjct: 67 YLFGRIDMQLKLVAGNSAGTVTAYYLSS 94 Score = 23.1 bits (48), Expect(2) = 2e-05 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +3 Query: 198 HEEFETEGNVRAGYDARGRQVASIVLDRQSGGAF 299 +EEF+ G G ++ S+ LDR SG F Sbjct: 28 NEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGF 61
>XTH21_ARATH (Q9ZV40) Probable xyloglucan endotransglucosylase/hydrolase protein| 21 precursor (EC 2.4.1.207) (At-XTH21) (XTH-21) Length = 305 Score = 46.2 bits (108), Expect = 2e-05 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YLYG+ +Q+KLVPGNSAGTV +FYL S Sbjct: 68 YLYGKVDMQIKLVPGNSAGTVTTFYLKS 95
>XTH22_ARATH (Q38857) Xyloglucan endotransglucosylase/hydrolase protein 22| precursor (EC 2.4.1.207) (At-XTH22) (XTH-22) (Touch protein 4) Length = 284 Score = 45.4 bits (106), Expect = 3e-05 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ S+QMKLVPGNSAGTV + YL S Sbjct: 63 YLFGKVSMQMKLVPGNSAGTVTTLYLKS 90
>XTH24_ARATH (P24806) Xyloglucan endotransglucosylase/hydrolase protein 24| precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem protein 5) (MERI-5 protein) (MERI5 protein) (Endo-xyloglucan transferase) (Xyloglucan endo-1,4-beta-D-glucanase) Length = 269 Score = 45.1 bits (105), Expect = 4e-05 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ +Q+KLVPGNSAGTV +FYL S Sbjct: 64 YLFGKIDMQIKLVPGNSAGTVTTFYLKS 91
>XTH25_ARATH (Q38907) Probable xyloglucan endotransglucosylase/hydrolase protein| 25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25) Length = 284 Score = 44.3 bits (103), Expect = 7e-05 Identities = 18/28 (64%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ +Q+KLVPGNSAGTV ++YL S Sbjct: 70 YLFGKIDMQLKLVPGNSAGTVTAYYLKS 97
>XTH_WHEAT (Q41542) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) Length = 293 Score = 44.3 bits (103), Expect = 7e-05 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSGN 405 YL+G FS+ +KLV G+SAGTV +FYLSS N Sbjct: 72 YLFGHFSMHIKLVGGDSAGTVTAFYLSSQN 101
>XTH12_ARATH (Q9FKL9) Probable xyloglucan endotransglucosylase/hydrolase protein| 12 precursor (EC 2.4.1.207) (At-XTH12) (XTH-12) Length = 285 Score = 43.9 bits (102), Expect = 9e-05 Identities = 18/28 (64%), Positives = 25/28 (89%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ +++KLVPGNSAGTV ++YLSS Sbjct: 67 YLFGKIDMKIKLVPGNSAGTVTAYYLSS 94
>XTH5_ARATH (Q9XIW1) Probable xyloglucan endotransglucosylase/hydrolase protein| 5 precursor (EC 2.4.1.207) (At-XTH5) (XTH-5) Length = 293 Score = 43.9 bits (102), Expect = 9e-05 Identities = 19/30 (63%), Positives = 25/30 (83%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSGN 405 YL+G FS+ +K+V G+SAGTV +FYLSS N Sbjct: 72 YLFGHFSMHIKMVAGDSAGTVTAFYLSSQN 101
>XTH_TOBAC (P93349) Probable xyloglucan endotransglucosylase/hydrolase protein| precursor (EC 2.4.1.207) Length = 295 Score = 43.9 bits (102), Expect = 9e-05 Identities = 19/30 (63%), Positives = 25/30 (83%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSGN 405 YL+G FS+++KLV G+SAG V +FYLSS N Sbjct: 72 YLFGHFSMKLKLVGGDSAGVVTAFYLSSNN 101
>XTH1_LYCES (Q40144) Probable xyloglucan endotransglucosylase/hydrolase 1| precursor (EC 2.4.1.207) (LeXTH1) Length = 296 Score = 43.9 bits (102), Expect = 9e-05 Identities = 19/30 (63%), Positives = 25/30 (83%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSGN 405 YL+G FS++M+LV G+SAG V +FYLSS N Sbjct: 73 YLFGHFSMKMRLVGGDSAGVVTAFYLSSNN 102
>XTHB_PHAAN (Q8LNZ5) Probable xyloglucan endotransglucosylase/hydrolase protein| B precursor (EC 2.4.1.207) (VaXTH2) Length = 293 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/30 (63%), Positives = 25/30 (83%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSGN 405 YL+G FS+ +K+VPG+SAGTV +F LSS N Sbjct: 72 YLFGHFSMNIKMVPGDSAGTVTAFCLSSQN 101
>XTH15_ARATH (Q38911) Probable xyloglucan endotransglucosylase/hydrolase protein| 15 precursor (EC 2.4.1.207) (At-XTH15) (XTH-15) Length = 289 Score = 42.7 bits (99), Expect = 2e-04 Identities = 18/28 (64%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ +Q+KLV GNSAGTV ++YLSS Sbjct: 68 YLFGRIDMQLKLVAGNSAGTVTAYYLSS 95
>BRU1_SOYBN (P35694) Brassinosteroid-regulated protein BRU1 precursor| Length = 283 Score = 42.7 bits (99), Expect = 2e-04 Identities = 18/28 (64%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ +Q+KLV GNSAGTV ++YLSS Sbjct: 72 YLFGRIDMQLKLVAGNSAGTVTAYYLSS 99
>XTH9_ARATH (Q8LDW9) Xyloglucan endotransglucosylase/hydrolase protein 9| precursor (EC 2.4.1.207) (At-XTH9) (XTH-9) Length = 290 Score = 42.7 bits (99), Expect = 2e-04 Identities = 18/28 (64%), Positives = 25/28 (89%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ S+Q+KLV G+SAGTV +FY+SS Sbjct: 67 YLFGKVSIQIKLVEGDSAGTVTAFYMSS 94
>XTH13_ARATH (Q9FKL8) Putative xyloglucan endotransglucosylase/hydrolase protein| 13 precursor (EC 2.4.1.207) (At-XTH13) (XTH-13) Length = 284 Score = 42.4 bits (98), Expect = 3e-04 Identities = 18/28 (64%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ ++MKLV GNSAGTV ++YLSS Sbjct: 66 YLFGKIDMKMKLVAGNSAGTVTAYYLSS 93
>XTH6_ARATH (Q8LF99) Probable xyloglucan endotransglucosylase/hydrolase protein| 6 precursor (EC 2.4.1.207) (At-XTH6) (XTH-6) Length = 292 Score = 42.0 bits (97), Expect = 3e-04 Identities = 16/28 (57%), Positives = 26/28 (92%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ S+++KL+PG+SAGTV +FY++S Sbjct: 75 YLFGRVSMKIKLIPGDSAGTVTAFYMNS 102
>XTH7_ARATH (Q8LER3) Probable xyloglucan endotransglucosylase/hydrolase protein| 7 precursor (EC 2.4.1.207) (At-XTH7) (XTH-7) Length = 293 Score = 42.0 bits (97), Expect = 3e-04 Identities = 16/28 (57%), Positives = 26/28 (92%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ S+++KL+PG+SAGTV +FY++S Sbjct: 74 YLFGRVSMKIKLIPGDSAGTVTAFYMNS 101
>XTH26_ARATH (Q9SVV2) Putative xyloglucan endotransglucosylase/hydrolase protein| 26 precursor (EC 2.4.1.207) (At-XTH26) (XTH-26) Length = 292 Score = 41.6 bits (96), Expect = 5e-04 Identities = 18/28 (64%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 +L+G + +KLVPGNSAGTVA++YLSS Sbjct: 67 HLFGSVEMLIKLVPGNSAGTVAAYYLSS 94
>XTH14_ARATH (Q9ZSU4) Xyloglucan endotransglucosylase/hydrolase protein 14| precursor (EC 2.4.1.207) (At-XTH14) (XTH-14) Length = 287 Score = 41.2 bits (95), Expect = 6e-04 Identities = 17/28 (60%), Positives = 24/28 (85%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ +++KLV GNSAGTV ++YLSS Sbjct: 70 YLFGKIDMKLKLVAGNSAGTVTAYYLSS 97
>XTH23_ARATH (Q38910) Probable xyloglucan endotransglucosylase/hydrolase protein| 23 precursor (EC 2.4.1.207) (At-XTH23) (XTH-23) Length = 286 Score = 40.8 bits (94), Expect = 8e-04 Identities = 17/28 (60%), Positives = 23/28 (82%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 YL+G+ +Q+KLV GNSAGTV ++YL S Sbjct: 66 YLFGKIDMQIKLVAGNSAGTVTAYYLKS 93
>XTH_BRAOB (Q6YDN9) Xyloglucan endotransglucosylase/hydrolase precursor (EC| 2.4.1.207) (BobXET16A) Length = 295 Score = 39.3 bits (90), Expect = 0.002 Identities = 17/30 (56%), Positives = 23/30 (76%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSGN 405 YL+G FS+ +KL G++AG V +FYLSS N Sbjct: 74 YLFGHFSMHIKLPAGDTAGVVTAFYLSSTN 103
>XTH4_ARATH (Q39099) Xyloglucan endotransglucosylase/hydrolase protein 4| precursor (EC 2.4.1.207) (At-XTH4) (XTH-4) Length = 296 Score = 39.3 bits (90), Expect = 0.002 Identities = 17/30 (56%), Positives = 23/30 (76%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSGN 405 YL+G FS+ +KL G++AG V +FYLSS N Sbjct: 75 YLFGHFSMHIKLPAGDTAGVVTAFYLSSTN 104
>XTH8_ARATH (Q8L9A9) Probable xyloglucan endotransglucosylase/hydrolase protein| 8 precursor (EC 2.4.1.207) (At-XTH8) (XTH-8) Length = 292 Score = 36.2 bits (82), Expect = 0.019 Identities = 15/30 (50%), Positives = 23/30 (76%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSGN 405 Y +G FS+++KLV G+SAG V ++Y+ S N Sbjct: 65 YRFGWFSMKLKLVGGDSAGVVTAYYMCSEN 94
>XTH10_ARATH (Q9ZVK1) Probable xyloglucan endotransglucosylase/hydrolase protein| 10 precursor (EC 2.4.1.207) (At-XTH10) (XTH-10) Length = 299 Score = 35.4 bits (80), Expect = 0.033 Identities = 13/28 (46%), Positives = 23/28 (82%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 +L+GQ +++KL+ G+S GTV ++Y+SS Sbjct: 77 FLFGQIDMKIKLIRGSSQGTVVAYYMSS 104
>XTH28_ARATH (Q38909) Probable xyloglucan endotransglucosylase/hydrolase protein| 28 precursor (EC 2.4.1.207) (At-XTH28) (XTH-28) Length = 332 Score = 33.5 bits (75), Expect = 0.12 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSGN 405 YL+G FS +KL SAG V +FYLS+G+ Sbjct: 71 YLHGFFSSSIKLPADYSAGVVIAFYLSNGD 100
>XTH27_ARATH (Q8LDS2) Probable xyloglucan endotransglucosylase/hydrolase protein| 27 precursor (EC 2.4.1.207) (At-XTH27) (XTH-27) Length = 333 Score = 32.7 bits (73), Expect = 0.21 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSSGN 405 YL+G FS +KL +AG V +FY+S+G+ Sbjct: 71 YLHGFFSASIKLPSDYTAGVVVAFYMSNGD 100
>XTH2_ARATH (Q9SV60) Putative xyloglucan endotransglucosylase/hydrolase protein| 2 precursor (EC 2.4.1.207) (At-XTH2) (XTH-2) Length = 292 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 Y G F +++KL P +SAG V +FYL+S Sbjct: 72 YGSGFFQMRIKLPPRDSAGVVTAFYLTS 99
>XTH3_ARATH (Q9LJR7) Probable xyloglucan endotransglucosylase/hydrolase protein| 3 precursor (EC 2.4.1.207) (At-XTH3) (XTH-3) Length = 290 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +1 Query: 316 YLYGQFSVQMKLVPGNSAGTVASFYLSS 399 Y G F +++K+ GN+ G V +FYL+S Sbjct: 75 YGSGLFEMRIKVPSGNTGGIVTAFYLTS 102
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +3 Query: 219 GNVRAGYDARGRQVASIVLDRQSGGAFPVPAQLPLRPVQRPDEA 350 G+ G A+G Q A +RQ GG P PA +P P Q P +A Sbjct: 286 GSRPQGGSAQGAQGAPSQ-ERQGGGRRPSPAMMPPTPGQMPAKA 328
>FSHP1_MOUSE (Q8K1K4) Follicle-stimulating hormone primary response protein (FSH| primary response protein 1) Length = 746 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +3 Query: 261 ASIVLDRQSGGAFPVPAQLPLRP 329 AS+ + ++ GAFP P LPLRP Sbjct: 269 ASLAVRLRNQGAFPEPLNLPLRP 291
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +3 Query: 249 GRQVASIVLDRQSGGAFPVPAQLPLRPVQRPDEA 350 G + +RQ GG P PA +P P Q P +A Sbjct: 255 GNAAGAASQERQGGGRRPSPAMMPPTPGQMPAKA 288 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,168,922 Number of Sequences: 219361 Number of extensions: 411531 Number of successful extensions: 1214 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 1196 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1214 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
