>GCSP_XANAC (Q8PN59) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 977

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 429 HVEPAEPRAGL--GRGAQQVLHGGGGADEVGD 340
           H+ P  PRAG+  G G    +HGGG   E G+
Sbjct: 723 HLAPYLPRAGIHAGEGQTAAIHGGGFNSESGN 754

>USH1C_HUMAN (Q9Y6N9) Harmonin (Usher syndrome type-1C protein) (Autoimmune|
           enteropathy-related antigen AIE-75) (Antigen
           NY-CO-38/NY-CO-37) (PDZ-73 protein) (NY-REN-3 antigen)
          Length = 552

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 259 SDPVGIRVHDVIIRGNAKTREELIEAEVADLIRSATTV 372
           +D VG++V D I+R N  +       EV +LIR+  TV
Sbjct: 123 ADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTV 160

>USH1C_MOUSE (Q9ES64) Harmonin (Usher syndrome type-1C protein homolog) (PDZ|
           domain-containing protein)
          Length = 910

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 259 SDPVGIRVHDVIIRGNAKTREELIEAEVADLIRSATTV 372
           +D VG++V D I+R N  +       EV +LIR+  TV
Sbjct: 123 ADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTV 160

>AKR1_KLULA (Q875M2) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin|
           repeat-containing protein AKR1)
          Length = 752

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 253 LSSDPVGIRVHDVIIRGNAKTREELIEAEVADL 351
           +  DP+  R H    +G+ KT  E++E++V DL
Sbjct: 68  VEKDPILERYHAACKQGDMKTLREMVESKVIDL 100


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.131    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,341,882
Number of Sequences: 219361
Number of extensions: 299486
Number of successful extensions: 1440
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)