Clone Name | bart52h01 |
---|---|
Clone Library Name | barley_pub |
>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02, complete sequence Length = 147407 Score = 200 bits (101), Expect = 3e-48 Identities = 185/213 (86%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctggacgagccggcggccgcagccctcgagcgggagaag 231 ||||| |||||||||| |||||||||| |||||| |||| || |||||||||||| Sbjct: 27057 gaggaggaggaggaggtggagctggacgggccggcagccgtggcggcggagcgggagaag 26998 Query: 232 gtgcagtccgtgttctggaggctcagctcggaccccgtggggatccgcgtccacgacgtc 291 |||||| |||||||| | |||| |||||||||||||| ||||||||||||||||| Sbjct: 26997 gtgcaggccgtgttcaagcggctgtcgtcggaccccgtgggcatccgcgtccacgacgtg 26938 Query: 292 atcatcaggggcaacgccaagacgcgggaggagctcatcgaggcggaggtcgccgacctc 351 ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 26937 atcatcaagggcaacgccaagacgaaggaggagctcatcgaggcggaggtcgccgagctc 26878 Query: 352 atccgctccgccaccaccgtgcaggacctgctg 384 ||||| ||||| |||||||||||||||||||| Sbjct: 26877 ctccgcgccgcccccaccgtgcaggacctgctg 26845
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 200 bits (101), Expect = 3e-48 Identities = 185/213 (86%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctggacgagccggcggccgcagccctcgagcgggagaag 231 ||||| |||||||||| |||||||||| |||||| |||| || |||||||||||| Sbjct: 68590 gaggaggaggaggaggtggagctggacgggccggcagccgtggcggcggagcgggagaag 68531 Query: 232 gtgcagtccgtgttctggaggctcagctcggaccccgtggggatccgcgtccacgacgtc 291 |||||| |||||||| | |||| |||||||||||||| ||||||||||||||||| Sbjct: 68530 gtgcaggccgtgttcaagcggctgtcgtcggaccccgtgggcatccgcgtccacgacgtg 68471 Query: 292 atcatcaggggcaacgccaagacgcgggaggagctcatcgaggcggaggtcgccgacctc 351 ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 68470 atcatcaagggcaacgccaagacgaaggaggagctcatcgaggcggaggtcgccgagctc 68411 Query: 352 atccgctccgccaccaccgtgcaggacctgctg 384 ||||| ||||| |||||||||||||||||||| Sbjct: 68410 ctccgcgccgcccccaccgtgcaggacctgctg 68378
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 200 bits (101), Expect = 3e-48 Identities = 185/213 (86%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctggacgagccggcggccgcagccctcgagcgggagaag 231 ||||| |||||||||| |||||||||| |||||| |||| || |||||||||||| Sbjct: 22964577 gaggaggaggaggaggtggagctggacgggccggcagccgtggcggcggagcgggagaag 22964518 Query: 232 gtgcagtccgtgttctggaggctcagctcggaccccgtggggatccgcgtccacgacgtc 291 |||||| |||||||| | |||| |||||||||||||| ||||||||||||||||| Sbjct: 22964517 gtgcaggccgtgttcaagcggctgtcgtcggaccccgtgggcatccgcgtccacgacgtg 22964458 Query: 292 atcatcaggggcaacgccaagacgcgggaggagctcatcgaggcggaggtcgccgacctc 351 ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 22964457 atcatcaagggcaacgccaagacgaaggaggagctcatcgaggcggaggtcgccgagctc 22964398 Query: 352 atccgctccgccaccaccgtgcaggacctgctg 384 ||||| ||||| |||||||||||||||||||| Sbjct: 22964397 ctccgcgccgcccccaccgtgcaggacctgctg 22964365 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 166 gagtacgaggacgaggaggaggaagagct 194 |||||||| |||||||||||||||||||| Sbjct: 27963062 gagtacgatgacgaggaggaggaagagct 27963090 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 caaccatggccgacgccgcc 72 |||||||||||||||||||| Sbjct: 25270465 caaccatggccgacgccgcc 25270484 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 gccgacgccgccgagcccgccgcc 84 |||| ||||||||||||||||||| Sbjct: 6146517 gccgccgccgccgagcccgccgcc 6146494
>dbj|AK069780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028F19, full insert sequence Length = 3290 Score = 200 bits (101), Expect = 3e-48 Identities = 185/213 (86%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctggacgagccggcggccgcagccctcgagcgggagaag 231 ||||| |||||||||| |||||||||| |||||| |||| || |||||||||||| Sbjct: 143 gaggaggaggaggaggtggagctggacgggccggcagccgtggcggcggagcgggagaag 202 Query: 232 gtgcagtccgtgttctggaggctcagctcggaccccgtggggatccgcgtccacgacgtc 291 |||||| |||||||| | |||| |||||||||||||| ||||||||||||||||| Sbjct: 203 gtgcaggccgtgttcaagcggctgtcgtcggaccccgtgggcatccgcgtccacgacgtg 262 Query: 292 atcatcaggggcaacgccaagacgcgggaggagctcatcgaggcggaggtcgccgacctc 351 ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 263 atcatcaagggcaacgccaagacgaaggaggagctcatcgaggcggaggtcgccgagctc 322 Query: 352 atccgctccgccaccaccgtgcaggacctgctg 384 ||||| ||||| |||||||||||||||||||| Sbjct: 323 ctccgcgccgcccccaccgtgcaggacctgctg 355
>gb|BT018620.1| Zea mays clone EL01N0502A08.d mRNA sequence Length = 1380 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggaggagg 187 |||||| |||||| ||||||||||||||||||||||| Sbjct: 1069 cgccgacgaggagggcgagtacgaggacgaggaggagg 1106
>emb|X52878.1|ZMB1TUB Maize gene for beta 1 tubulin Length = 2461 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggaggagg 187 |||||| |||||| ||||||||||||||||||||||| Sbjct: 1926 cgccgacgaggagggcgagtacgaggacgaggaggagg 1963
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 166 gagtacgaggacgaggaggaggaagagct 194 |||||||| |||||||||||||||||||| Sbjct: 43227 gagtacgatgacgaggaggaggaagagct 43255
>dbj|AK099641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060F08, full insert sequence Length = 3210 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 166 gagtacgaggacgaggaggaggaagagct 194 |||||||| |||||||||||||||||||| Sbjct: 263 gagtacgatgacgaggaggaggaagagct 291
>gb|BT019207.1| Zea mays clone Contig880.F mRNA sequence Length = 852 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 152 ccgaggaggagttcgagtacgaggacgaggaggagg 187 |||| |||||| ||||||||||||||||||||||| Sbjct: 489 ccgacgaggagggcgagtacgaggacgaggaggagg 524
>ref|XM_361595.1| Magnaporthe grisea 70-15 hypothetical protein (MG04069.4) partial mRNA Length = 984 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctggacg 199 ||||| |||||||||||||||||||||| Sbjct: 697 gaggaagaggaggaggaagagctggacg 724
>emb|CR703728.2|CNS0G5Y4 Tetraodon nigroviridis full-length cDNA Length = 1036 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 165 cgagtacgaggacgaggaggaggaagag 192 |||||||||||| ||||||||||||||| Sbjct: 76 cgagtacgaggaggaggaggaggaagag 103
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 175 gacgaggaggaggaagagctggacgagc 202 ||||||||||||||||||||||| |||| Sbjct: 1324793 gacgaggaggaggaagagctggaagagc 1324820 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 57 catggccgacgccgccgagcccgccgcc 84 |||| |||||||||||||||||| |||| Sbjct: 1429928 catgcccgacgccgccgagcccgacgcc 1429955
>gb|U00794.1| Sus scrofa POU-domain protein (OCT2) mRNA, complete cds Length = 1974 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 154 gaggaggagttcgagtacgaggacgaggaggagga 188 ||||||||| |||| ||||||||||||||||||| Sbjct: 1696 gaggaggaggacgaggacgaggacgaggaggagga 1662
>gb|AC161373.4| Mus musculus BAC clone RP23-308E4 from chromosome 6, complete sequence Length = 189028 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 154 gaggaggagttcgagtacgaggacgaggaggaggaagag 192 ||||||||| |||||| ||||| ||||||||||||||| Sbjct: 4320 gaggaggaggacgagtaggaggaggaggaggaggaagag 4282
>gb|U53154.1| Caenorhabditis elegans cosmid C33G8, complete sequence Length = 39103 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaagag 192 ||||||||||||||||||||||| Sbjct: 28121 acgaggacgaggaggaggaagag 28143
>ref|XM_323489.1| Neurospora crassa OR74A hypothetical protein (NCU04150.1) partial mRNA Length = 975 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagct 194 ||||||||||||||||||||||| Sbjct: 658 gaggacgaggaggaggaagagct 680
>ref|XM_956213.1| Neurospora crassa OR74A hypothetical protein (NCU04150.1) partial mRNA Length = 975 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagct 194 ||||||||||||||||||||||| Sbjct: 658 gaggacgaggaggaggaagagct 680
>gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, complete sequence Length = 168641 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 154 gaggaggagttcgagtacgaggacgaggaggaggaagag 192 ||||||||| |||||| ||||| ||||||||||||||| Sbjct: 120173 gaggaggaggacgagtaggaggaggaggaggaggaagag 120135
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaagag 192 ||||||||||||||||||||||| Sbjct: 101612 acgaggacgaggaggaggaagag 101634
>gb|AC112256.4| Mus musculus BAC clone RP23-40C8 from 10, complete sequence Length = 157928 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 154 gaggaggagttcgagtacgaggacgaggaggagga 188 ||||||||| |||| ||||||||||||||||||| Sbjct: 51820 gaggaggaggacgaggacgaggacgaggaggagga 51854
>gb|AC107842.13| Mus musculus chromosome 1, clone RP23-304O9, complete sequence Length = 215781 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaagag 192 ||||||||||||||||||||||| Sbjct: 208894 acgaggacgaggaggaggaagag 208872
>emb|X12855.1|VCTUBB1 Volvox carteri beta-1 tubulin gene Length = 2725 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggaggagga 188 ||||||||||||| ||||| ||||| |||||||||||| Sbjct: 2132 cgccgaggaggagggcgagttcgagggcgaggaggagga 2170
>emb|AL513463.1|NC9G6 Neurospora crassa DNA linkage group V Cosmid contig 9G6 Length = 125561 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagct 194 ||||||||||||||||||||||| Sbjct: 28386 gaggacgaggaggaggaagagct 28364
>gb|AC158577.5| Mus musculus chromosome 1, clone RP24-187D4, complete sequence Length = 155742 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaagag 192 ||||||||||||||||||||||| Sbjct: 40327 acgaggacgaggaggaggaagag 40305
>ref|NM_072373.1| Caenorhabditis elegans C33G8.3 (C33G8.3) mRNA, complete cds Length = 429 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaagag 192 ||||||||||||||||||||||| Sbjct: 260 acgaggacgaggaggaggaagag 282
>gb|AC157773.6| Mus musculus chromosome 8, clone RP24-161L20, complete sequence Length = 179186 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 154 gaggaggagttcgagtacgaggacgaggaggaggaagag 192 ||||||||| |||| ||||||||||||| ||||||||| Sbjct: 2843 gaggaggaggacgaggacgaggacgaggacgaggaagag 2805
>ref|NM_214040.1| Sus scrofa POU-domain protein (OCT2), mRNA Length = 1974 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Minus Query: 154 gaggaggagttcgagtacgaggacgaggaggagga 188 ||||||||| |||| ||||||||||||||||||| Sbjct: 1696 gaggaggaggacgaggacgaggacgaggaggagga 1662
>emb|X93358.1|RMPHA Rhizobium meliloti pha[A,B,C,D,E,F,G] genes Length = 7888 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaagag 192 ||||||||||||||||||||||| Sbjct: 5349 acgaggacgaggaggaggaagag 5371
>gb|AC121131.14| Mus musculus chromosome 8, clone RP23-187D7, complete sequence Length = 188634 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 154 gaggaggagttcgagtacgaggacgaggaggaggaagag 192 ||||||||| |||| ||||||||||||| ||||||||| Sbjct: 85444 gaggaggaggacgaggacgaggacgaggacgaggaagag 85406
>emb|AL844566.8| Mouse DNA sequence from clone RP23-173H17 on chromosome 2, complete sequence Length = 229583 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 154 gaggaggagttcgagtacgaggacgaggaggagga 188 ||||||||| |||| ||||||||||||||||||| Sbjct: 77018 gaggaggaggacgaggacgaggacgaggaggagga 77052 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 153 cgaggaggagttcgagtacgaggacgaggaggagga 188 |||||||||| |||| | ||||||||||||||||| Sbjct: 77059 cgaggaggaggacgaggaggaggacgaggaggagga 77094
>gb|AC140402.2| Mus musculus BAC clone RP24-90D2 from 10, complete sequence Length = 237935 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 154 gaggaggagttcgagtacgaggacgaggaggagga 188 ||||||||| |||| ||||||||||||||||||| Sbjct: 145967 gaggaggaggacgaggacgaggacgaggaggagga 146001
>gb|AC138617.4| Mus musculus BAC clone RP23-403G9 from 8, complete sequence Length = 204919 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 154 gaggaggagttcgagtacgaggacgaggaggagga 188 ||||||||| |||| ||||||||||||||||||| Sbjct: 94901 gaggaggaggacgaggacgaggacgaggaggagga 94935
>gb|AC167977.3| Mus musculus BAC clone RP23-80B14 from chromosome 13, complete sequence Length = 237646 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 154 gaggaggagttcgagtacgaggacgaggaggagga 188 ||||||||| ||||||| ||||| ||||||||||| Sbjct: 169847 gaggaggagctcgagtaggaggaggaggaggagga 169881
>gb|K03281.1|CRETBBB Chlamydomonas reinhardtii beta-2 tubulin gene, complete cds Length = 2461 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggaggagga 188 ||||||||||||| ||||| ||||| |||||||||||| Sbjct: 1962 cgccgaggaggagggcgagttcgagggcgaggaggagga 2000
>dbj|D88440.1| Gallus gallus mRNA for high molecular mass nuclear antigen, partial cds Length = 3452 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagct 194 ||||||||||||||||||||||| Sbjct: 3413 gaggacgaggaggaggaagagct 3391
>gb|AC154048.1| Drosophila melanogaster clone BACR29A04, complete sequence Length = 159930 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctggacgag 201 |||||||||||||| || |||||||||||| Sbjct: 54130 gaggacgaggaggaagatgagctggacgag 54159
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctggacgag 201 |||||||||||||| || |||||||||||| Sbjct: 3211 gaggacgaggaggaagatgagctggacgag 3182
>gb|BC031905.1| Mus musculus tripartite motif-containing 41, mRNA (cDNA clone IMAGE:5363476), with apparent retained intron Length = 2728 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||||||||||||||||| |||||| Sbjct: 1160 gaggacgaggaggaggaagtgctgga 1185
>ref|XM_550463.1| Oryza sativa (japonica cultivar-group), mRNA Length = 942 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 ggacgaggaggaggaagagctg 195 |||||||||||||||||||||| Sbjct: 39 ggacgaggaggaggaagagctg 18
>ref|XM_468037.1| Oryza sativa (japonica cultivar-group), mRNA Length = 727 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 593 acgaggacgaggaggaggaaga 614
>ref|XM_519080.1| PREDICTED: Pan troglodytes similar to KIAA0363 (LOC463390), mRNA Length = 4395 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctggacgag 201 ||||| ||||||||||||||| |||||||| Sbjct: 4165 gaggaagaggaggaggaagaggtggacgag 4194
>ref|NM_190985.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1344 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggag 183 |||||| |||||| ||||||||||||||||||| Sbjct: 1287 cgccgatgaggagggcgagtacgaggacgaggag 1320
>gb|BT016487.1| Zea mays clone Contig320 mRNA sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 gagtacgaggacgaggaggagg 187 |||||||||||||||||||||| Sbjct: 821 gagtacgaggacgaggaggagg 842
>gb|BT016901.1| Zea mays clone Contig734 mRNA sequence Length = 657 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 gagtacgaggacgaggaggagg 187 |||||||||||||||||||||| Sbjct: 337 gagtacgaggacgaggaggagg 316
>gb|BC025078.1| Mus musculus zinc finger, CCHC domain containing 10, mRNA (cDNA clone MGC:35654 IMAGE:4504126), complete cds Length = 1229 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 159 ggagttcgagtacgaggacgaggaggaggaagag 192 ||||| ||||| |||||| ||||||||||||||| Sbjct: 481 ggagtccgagtccgaggaggaggaggaggaagag 448
>gb|AC116075.5| Rattus norvegicus 6 BAC CH230-139H23 (Children's Hospital Oakland Research Institute) complete sequence Length = 153441 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 119291 acgaggacgaggaggaggaaga 119312
>ref|XM_427018.1| PREDICTED: Gallus gallus similar to PAP-1 binding protein (LOC429462), partial mRNA Length = 577 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 cgaggacgaggaggaggaagag 192 |||||||||||||||||||||| Sbjct: 268 cgaggacgaggaggaggaagag 289
>ref|XM_369070.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00174.4) partial mRNA Length = 2127 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 164 tcgagtacgaggacgaggagga 185 |||||||||||||||||||||| Sbjct: 800 tcgagtacgaggacgaggagga 821
>ref|XM_612112.2| PREDICTED: Bos taurus similar to iroquois homeobox protein 5, transcript variant 2 (LOC532896), mRNA Length = 2063 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 cgaggacgaggaggaggaagag 192 |||||||||||||||||||||| Sbjct: 555 cgaggacgaggaggaggaagag 576
>ref|XM_872286.1| PREDICTED: Bos taurus similar to iroquois homeobox protein 5, transcript variant 3 (LOC532896), mRNA Length = 1882 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 cgaggacgaggaggaggaagag 192 |||||||||||||||||||||| Sbjct: 380 cgaggacgaggaggaggaagag 401
>gb|BC014703.1| Mus musculus RNA, U3 small nucleolar interacting protein 2, mRNA (cDNA clone MGC:25949 IMAGE:4237895), complete cds Length = 1589 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 229 gaggaagaggaggaggaagagctgga 254
>ref|XM_978535.1| PREDICTED: Mus musculus tripartite motif-containing 41, transcript variant 2 (Trim41), mRNA Length = 2736 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||||||||||||||||| |||||| Sbjct: 448 gaggacgaggaggaggaagtgctgga 473
>ref|XM_982741.1| PREDICTED: Mus musculus tripartite motif-containing 41, transcript variant 3 (Trim41), mRNA Length = 3676 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||||||||||||||||| |||||| Sbjct: 1388 gaggacgaggaggaggaagtgctgga 1413
>ref|XM_994167.1| PREDICTED: Mus musculus tripartite motif-containing 41 (Trim41), mRNA Length = 3796 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||||||||||||||||| |||||| Sbjct: 1508 gaggacgaggaggaggaagtgctgga 1533
>gb|AC119219.6| Mus musculus chromosome 12, clone RP24-201C18, complete sequence Length = 187098 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 35941 acgaggacgaggaggaggaaga 35920
>gb|AC107663.10| Mus musculus chromosome 13, clone RP23-99G9, complete sequence Length = 213163 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 110978 gaggaggaggaggaggaagagctgga 110953
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 186 ggaagagctggacgagccggcg 207 |||||||||||||||||||||| Sbjct: 1215447 ggaagagctggacgagccggcg 1215468
>gb|BC019503.1| Mus musculus B-cell leukemia/lymphoma 11B, mRNA (cDNA clone MGC:27524 IMAGE:4457123), complete cds Length = 2710 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 1447 acgaggacgaggaggaggaaga 1468
>emb|AL445438.27| Human DNA sequence from clone RP11-427B20 on chromosome 1 Contains two CpG islands, complete sequence Length = 108271 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctggacgag 201 ||||||||||||||||||||| ||||||| Sbjct: 52254 gaggacgaggaggaggaagaggaggacgag 52283
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 cgccgagcccgccgccggccag 90 |||||||||||||||||||||| Sbjct: 83613 cgccgagcccgccgccggccag 83592
>emb|BX058856.1|CNS09HKS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC39BH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 710 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 153 cgaggaggagttcgagtacgaggacgaggaggag 186 |||||||||| |||| ||||||||||||||||| Sbjct: 294 cgaggaggaggacgaggacgaggacgaggaggag 261
>emb|BX058855.1|CNS09HKR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC39BH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 820 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 153 cgaggaggagttcgagtacgaggacgaggaggag 186 |||||||||| |||| ||||||||||||||||| Sbjct: 594 cgaggaggaggacgaggacgaggacgaggaggag 627
>emb|BX053058.1|CNS09D3Q Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC30CA04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 356 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 153 cgaggaggagttcgagtacgaggacgaggaggag 186 |||||||||| |||| ||||||||||||||||| Sbjct: 298 cgaggaggaggacgaggacgaggacgaggaggag 265
>emb|BX053057.1|CNS09D3P Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC30CA04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 783 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 153 cgaggaggagttcgagtacgaggacgaggaggag 186 |||||||||| |||| ||||||||||||||||| Sbjct: 612 cgaggaggaggacgaggacgaggacgaggaggag 645
>emb|BX042209.1|CNS094QD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC14AF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 873 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 153 cgaggaggagttcgagtacgaggacgaggaggag 186 |||||||||| |||| ||||||||||||||||| Sbjct: 303 cgaggaggaggacgaggacgaggacgaggaggag 270
>emb|BX042208.1|CNS094QC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC14AF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 912 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 153 cgaggaggagttcgagtacgaggacgaggaggag 186 |||||||||| |||| ||||||||||||||||| Sbjct: 582 cgaggaggaggacgaggacgaggacgaggaggag 615
>emb|BX042088.1|CNS094N0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC13DG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 314 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 153 cgaggaggagttcgagtacgaggacgaggaggag 186 |||||||||| |||| ||||||||||||||||| Sbjct: 250 cgaggaggaggacgaggacgaggacgaggaggag 217
>emb|BX039441.1|CNS092LH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC1BB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 936 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 153 cgaggaggagttcgagtacgaggacgaggaggag 186 |||||||||| |||| ||||||||||||||||| Sbjct: 591 cgaggaggaggacgaggacgaggacgaggaggag 624
>emb|Z98269.1|DMC87B1 Drosophila melanogaster cosmid clone 87B1 Length = 40070 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 32622 acgaggacgaggaggaggaaga 32601
>ref|XM_777710.1| PREDICTED: Strongylocentrotus purpuratus similar to homeo box HB9 (LOC577485), mRNA Length = 1152 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 974 acgaggacgaggaggaggaaga 995
>emb|X78143.1|OSABTUB2 O.sativa (Arborio) Beta Tubulin mRNA, clone OSTB-16 Length = 1643 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggag 183 |||||| |||||| ||||||||||||||||||| Sbjct: 1352 cgccgatgaggagggcgagtacgaggacgaggag 1385
>emb|AL645849.17| Mouse DNA sequence from clone RP23-14F5 on chromosome 11 Contains a DEAD box polypeptide 5 (Ddx5) pseudogene, the Gnb2-rs1 gene for guanine nucleotide binding protein, beta 2 related sequence 1, the Trim41 gene for tripartite motif-containing 41, a novel protein similar to CDK2 (cyclin-dependent kinase 2)-associated protein 1 (Cdkap1), the Trim7 gene for tripartite motif protein 7, the Ifi1 gene for interferon inducible protein 1, a novel gene (LOC277018), two novel genes and four CpG islands, complete sequence Length = 202559 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||||||||||||||||| |||||| Sbjct: 75931 gaggacgaggaggaggaagtgctgga 75906
>gb|AC153567.6| Mus musculus 10 BAC RP23-187C5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226945 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 121370 gaggaggaggaggaggaagagctgga 121395
>gb|DQ100339.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH3) mRNA, partial cds Length = 719 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 247 tggaggctcagctcggaccccgtggg 272 |||||||||||||||||| ||||||| Sbjct: 365 tggaggctcagctcggacaccgtggg 340
>gb|AC152452.3| Mus musculus BAC clone RP24-279M22 from chromosome 9, complete sequence Length = 176943 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 221 gaggaagaggaggaggaagagctgga 246
>gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete sequence Length = 127223 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 31220 gaggaggaggaggaggaagagctgga 31195
>gb|AY119606.1| Drosophila melanogaster LD29979 full insert cDNA Length = 6786 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 2088 acgaggacgaggaggaggaaga 2109
>ref|NM_167301.1| Drosophila melanogaster CG2446-RE, transcript variant E (CG2446), mRNA Length = 2944 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctggacgag 201 |||||||||||||| || |||||||||||| Sbjct: 1968 gaggacgaggaggaagatgagctggacgag 1997
>ref|NM_167300.1| Drosophila melanogaster CG2446-RD, transcript variant D (CG2446), mRNA Length = 3016 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctggacgag 201 |||||||||||||| || |||||||||||| Sbjct: 2077 gaggacgaggaggaagatgagctggacgag 2106
>ref|NM_167299.1| Drosophila melanogaster CG2446-RB, transcript variant B (CG2446), mRNA Length = 2953 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctggacgag 201 |||||||||||||| || |||||||||||| Sbjct: 2014 gaggacgaggaggaagatgagctggacgag 2043
>ref|NM_167298.1| Drosophila melanogaster CG2446-RA, transcript variant A (CG2446), mRNA Length = 2845 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctggacgag 201 |||||||||||||| || |||||||||||| Sbjct: 1733 gaggacgaggaggaagatgagctggacgag 1762
>ref|NM_166931.1| Drosophila melanogaster wings apart-like CG3707-RB, transcript variant B (wapl), mRNA Length = 5092 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 429 acgaggacgaggaggaggaaga 450
>gb|AC160031.8| Mus musculus 10 BAC RP24-395H7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 191028 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 167 agtacgaggacgaggaggaggaagag 192 |||| ||||||||||||||||||||| Sbjct: 69926 agtaggaggacgaggaggaggaagag 69901
>ref|NM_132513.4| Drosophila melanogaster CG2446-RC, transcript variant C (CG2446), mRNA Length = 2973 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctggacgag 201 |||||||||||||| || |||||||||||| Sbjct: 2034 gaggacgaggaggaagatgagctggacgag 2063
>ref|NM_080303.2| Drosophila melanogaster wings apart-like CG3707-RA, transcript variant A (wapl), mRNA Length = 6773 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 2088 acgaggacgaggaggaggaaga 2109
>ref|NM_145620.3| Mus musculus RNA, U3 small nucleolar interacting protein 2 (Rnu3ip2), mRNA Length = 1589 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 229 gaggaagaggaggaggaagagctgga 254
>ref|NM_026479.2| Mus musculus zinc finger, CCHC domain containing 10 (Zcchc10), mRNA Length = 1258 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 159 ggagttcgagtacgaggacgaggaggaggaagag 192 ||||| ||||| |||||| ||||||||||||||| Sbjct: 466 ggagtccgagtccgaggaggaggaggaggaagag 433
>dbj|AK156199.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830011I10 product:RNA, U3 small nucleolar interacting protein 2, full insert sequence Length = 1613 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 221 gaggaagaggaggaggaagagctgga 246
>gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177724 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 129414 acgaggacgaggaggaggaaga 129393
>dbj|AK169856.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630001B12 product:2410141K03Rik protein (RIKEN cDNA 2410141K03 gene) (Hypothetical retrovirus zinc finger-like domains structure containing protein), full insert sequence Length = 1197 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 159 ggagttcgagtacgaggacgaggaggaggaagag 192 ||||| ||||| |||||| ||||||||||||||| Sbjct: 466 ggagtccgagtccgaggaggaggaggaggaagag 433
>dbj|AK169655.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004J01 product:B-cell leukemia/lymphoma 11B, full insert sequence Length = 1841 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 602 acgaggacgaggaggaggaaga 623
>dbj|AK163996.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330048H07 product:adaptor-related protein complex 3, beta 1 subunit, full insert sequence Length = 1942 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 154 gaggaggagttcgagtacgaggacgaggaggaggaaga 191 ||||||||| |||| | |||||||||||||||||||| Sbjct: 252 gaggaggaggacgaggatgaggacgaggaggaggaaga 289
>gb|AC153139.5| Mus musculus BAC clone RP23-411M4 from chromosome 13, complete sequence Length = 192541 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 179329 gaggaggaggaggaggaagagctgga 179304
>dbj|AK020177.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720490O22 product:hypothetical Retrovirus zinc finger-like domains structure containing protein, full insert sequence Length = 1258 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 159 ggagttcgagtacgaggacgaggaggaggaagag 192 ||||| ||||| |||||| ||||||||||||||| Sbjct: 466 ggagtccgagtccgaggaggaggaggaggaagag 433
>dbj|AK088588.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430020P03 product:B-cell lymphoma/leukaemia 11B, full insert sequence Length = 1842 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 602 acgaggacgaggaggaggaaga 623
>dbj|AK088219.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430007I21 product:B-cell lymphoma/leukaemia 11B, full insert sequence Length = 4636 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 1811 acgaggacgaggaggaggaaga 1832
>dbj|AK076113.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810410J09 product:U3 SNORNP ASSOCIATED 55 KDA PROTEIN (U3 SNORNP-ASSOCIATED 55-KDA PROTEIN) homolog [Homo sapiens], full insert sequence Length = 1538 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 231 gaggaagaggaggaggaagagctgga 256
>ref|NM_021399.1| Mus musculus B-cell leukemia/lymphoma 11B (Bcl11b), mRNA Length = 2697 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 1457 acgaggacgaggaggaggaaga 1478
>dbj|AK027985.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110061E09 product:hypothetical Retrovirus zinc finger-like domains structure containing protein, full insert sequence Length = 1252 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 159 ggagttcgagtacgaggacgaggaggaggaagag 192 ||||| ||||| |||||| ||||||||||||||| Sbjct: 473 ggagtccgagtccgaggaggaggaggaggaagag 440
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 ggacgaggaggaggaagagctg 195 |||||||||||||||||||||| Sbjct: 470709 ggacgaggaggaggaagagctg 470730 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 156 ggaggagttcgagtacgaggacgaggaggagga 188 |||||||| |||| ||||||| ||||||||||| Sbjct: 28269323 ggaggagtgcgaggacgaggaggaggaggagga 28269355 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 gtacgaggacgaggaggaggaagag 192 ||||||||| ||||||||||||||| Sbjct: 21470722 gtacgaggaggaggaggaggaagag 21470746
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 32682109 acgaggacgaggaggaggaaga 32682088 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cgaggacgaggaggaggaaga 191 ||||||||||||||||||||| Sbjct: 26050147 cgaggacgaggaggaggaaga 26050127 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 55 accatggccgacgccgccgagcccgccg 82 ||||||| || ||||||||||||||||| Sbjct: 24010129 accatgggcggcgccgccgagcccgccg 24010102 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctg 195 ||||| |||||||||||||||||| Sbjct: 9447169 gaggaggaggaggaggaagagctg 9447192 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 catcgaggcggaggtcgccg 346 |||||||||||||||||||| Sbjct: 1474526 catcgaggcggaggtcgccg 1474507
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggag 183 |||||| |||||| ||||||||||||||||||| Sbjct: 34164566 cgccgatgaggagggcgagtacgaggacgaggag 34164599 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 gccgacgccgccgagcccgccgccg 85 |||| |||||||||||||||||||| Sbjct: 34178692 gccgtcgccgccgagcccgccgccg 34178668
>gb|AC151729.6| Mus musculus BAC clone RP24-74F2 from chromosome 9, complete sequence Length = 224139 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 185748 gaggaagaggaggaggaagagctgga 185773
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggag 183 |||||| |||||| ||||||||||||||||||| Sbjct: 161044 cgccgatgaggagggcgagtacgaggacgaggag 161077
>dbj|AP003073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702B09 Length = 172541 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggag 183 |||||| |||||| ||||||||||||||||||| Sbjct: 252 cgccgatgaggagggcgagtacgaggacgaggag 285 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 gccgacgccgccgagcccgccgccg 85 |||| |||||||||||||||||||| Sbjct: 14378 gccgtcgccgccgagcccgccgccg 14354
>ref|XM_343469.2| PREDICTED: Rattus norvegicus RNA, U3 small nucleolar interacting protein 2 (predicted) (Rnu3ip2_predicted), mRNA Length = 1543 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 244 gaggaagaggaggaggaagagctgga 269
>ref|XM_234514.3| PREDICTED: Rattus norvegicus B-cell leukemia/lymphoma 11B (predicted) (Bcl11b_predicted), mRNA Length = 5714 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 1820 acgaggacgaggaggaggaaga 1841
>gb|BC041780.1| Mus musculus, Similar to hypothetical gene MGC1127, clone IMAGE:4506683, mRNA Length = 3455 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||||||||||||||||| |||||| Sbjct: 1146 gaggacgaggaggaggaagtgctgga 1171
>ref|XM_342577.2| PREDICTED: Rattus norvegicus similar to RIKEN cDNA F730014I05 (predicted) (LOC362269), mRNA Length = 2756 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 2360 gaggaggaggaggaggaagagctgga 2335
>gb|U75331.1|U75331 Gallus gallus bone morphogenetic protein 1 (BMP1) mRNA, partial cds Length = 2078 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaagagctg 195 ||||||| |||||||||||||||||| Sbjct: 84 acgaggaggaggaggaggaagagctg 109
>dbj|D17784.1|RICSS8320 Oryza sativa SS83 mRNA for beta tubulin, partial sequence Length = 519 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggag 183 |||||| |||||| ||||||||||||||||||| Sbjct: 276 cgccgatgaggagggcgagtacgaggacgaggag 309
>gb|AF186019.1|AF186019 Mus musculus CTIP2 protein (CTIP2) mRNA, complete cds Length = 2697 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 1457 acgaggacgaggaggaggaaga 1478
>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0514G12 Length = 138929 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 ggacgaggaggaggaagagctg 195 |||||||||||||||||||||| Sbjct: 16217 ggacgaggaggaggaagagctg 16238
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 ggacgaggaggaggaagagctg 195 |||||||||||||||||||||| Sbjct: 180662 ggacgaggaggaggaagagctg 180683
>dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1448_G06 Length = 136823 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 10344 acgaggacgaggaggaggaaga 10323
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 109480 acgaggacgaggaggaggaaga 109459
>ref|XM_320672.2| Anopheles gambiae str. PEST ENSANGP00000021274 (ENSANGG00000018785), partial mRNA Length = 1068 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 153 cgaggaggagttcgagtacgaggacgaggaggag 186 |||||||||| |||| ||||||||||||||||| Sbjct: 387 cgaggaggaggacgaggacgaggacgaggaggag 420
>gb|AC011013.17|AC011013 Mus musculus chromosome 11, clone RP23-218N2, complete sequence Length = 201728 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 159 ggagttcgagtacgaggacgaggaggaggaagag 192 ||||| ||||| |||||| ||||||||||||||| Sbjct: 50352 ggagtccgagtccgaggaggaggaggaggaagag 50319
>dbj|AK072502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023126C19, full insert sequence Length = 1638 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggag 183 |||||| |||||| ||||||||||||||||||| Sbjct: 1373 cgccgatgaggagggcgagtacgaggacgaggag 1406
>gb|BC087902.1| Mus musculus zinc finger, CCHC domain containing 10, mRNA (cDNA clone MGC:107221 IMAGE:30505854), complete cds Length = 1256 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 159 ggagttcgagtacgaggacgaggaggaggaagag 192 ||||| ||||| |||||| ||||||||||||||| Sbjct: 465 ggagtccgagtccgaggaggaggaggaggaagag 432
>dbj|AK062694.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-A07, full insert sequence Length = 727 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 593 acgaggacgaggaggaggaaga 614
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctggacgag 201 |||||||||||||| || |||||||||||| Sbjct: 6749 gaggacgaggaggaagatgagctggacgag 6720
>gb|AE003423.2| Drosophila melanogaster chromosome X, section 7 of 74 of the complete sequence Length = 292830 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 89093 acgaggacgaggaggaggaaga 89072
>gb|BC097374.1| Rattus norvegicus ADP-ribosylation factor-like 6 interacting protein 4, mRNA (cDNA clone MGC:114409 IMAGE:7444619), complete cds Length = 1217 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 557 gaggaggaggaggaggaagagctgga 532
>gb|BC099769.1| Rattus norvegicus ADP-ribosylation factor-like 6 interacting protein 4, mRNA (cDNA clone MGC:124687 IMAGE:7932047), complete cds Length = 1820 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 570 gaggaggaggaggaggaagagctgga 545
>dbj|D30716.1|RICBTA Oryza sativa (japonica cultivar-group) mRNA for beta-tubulin, complete cds Length = 1567 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggag 183 |||||| |||||| ||||||||||||||||||| Sbjct: 1308 cgccgatgaggagggcgagtacgaggacgaggag 1341
>gb|BT001379.1| Drosophila melanogaster GH02702 full insert cDNA Length = 3070 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctggacgag 201 |||||||||||||| || |||||||||||| Sbjct: 2053 gaggacgaggaggaagatgagctggacgag 2082
>ref|NM_001025630.1| Rattus norvegicus ADP-ribosylation factor-like 6 interacting protein 4 (Arl6ip4), mRNA Length = 1217 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 557 gaggaggaggaggaggaagagctgga 532
>gb|L24547.1|VVCB2T Volvox carteri beta-2 tubulin gene, complete cds Length = 2755 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 151 gccgaggaggagttcgagtacgaggacgaggaggagga 188 |||||||||||| ||||| ||||| |||||||||||| Sbjct: 2356 gccgaggaggagggcgagttcgagggcgaggaggagga 2393
>gb|U40214.1|DMU40214 Drosophila melanogaster parallel sister chromatids protein (pasc) mRNA, complete cds Length = 6447 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 1769 acgaggacgaggaggaggaaga 1790
>gb|AC153512.2| Mus musculus 10 BAC RP23-18K14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209885 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 agtacgaggacgaggaggaggaagag 192 |||| ||||||||||||||||||||| Sbjct: 11720 agtaggaggacgaggaggaggaagag 11745
>gb|L19598.1|RICRTUB1X Rice beta-tubulin (RTUB-1) mRNA, complete cds Length = 1803 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 150 cgccgaggaggagttcgagtacgaggacgaggag 183 |||||| |||||| ||||||||||||||||||| Sbjct: 1361 cgccgatgaggagggcgagtacgaggacgaggag 1394
>emb|AL772288.12| Mouse DNA sequence from clone RP23-360H6 on chromosome 4, complete sequence Length = 132015 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 171 cgaggacgaggaggaggaagagctgg 196 |||||||||||||||||| ||||||| Sbjct: 67808 cgaggacgaggaggaggatgagctgg 67833
>emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chromosome X, complete sequence Length = 175057 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 30548 acgaggacgaggaggaggaaga 30569
>gb|AF368232.1| Mus musculus U3-55k protein mRNA, complete cds Length = 1513 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgga 197 ||||| |||||||||||||||||||| Sbjct: 212 gaggaagaggaggaggaagagctgga 237
>dbj|AB043583.1| Mus musculus mRNA for zinc finger protein mRit1 gamma, complete cds Length = 2522 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 1281 acgaggacgaggaggaggaaga 1302
>dbj|AB043553.1| Mus musculus mRNA for zinc finger protein mRit1 beta, complete cds Length = 2888 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 1647 acgaggacgaggaggaggaaga 1668
>dbj|AB043551.1| Mus musculus mRNA for zinc finger protein mRit1 alpha, complete cds Length = 3104 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaaga 191 |||||||||||||||||||||| Sbjct: 1863 acgaggacgaggaggaggaaga 1884
>gb|L10633.1|MZEBTUB6A Zea mays beta-6 tubulin (tub6) gene and mRNA, complete cds Length = 1730 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 gagtacgaggacgaggaggagg 187 |||||||||||||||||||||| Sbjct: 1373 gagtacgaggacgaggaggagg 1394
>emb|AL592489.13| Mouse DNA sequence from clone RP23-226J16 on chromosome 11, complete sequence Length = 155262 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 159 ggagttcgagtacgaggacgaggaggaggaagag 192 ||||| ||||| |||||| ||||||||||||||| Sbjct: 41763 ggagtccgagtccgaggaggaggaggaggaagag 41730
>gb|AC119804.12| Mus musculus chromosome 7, clone RP23-144D10, complete sequence Length = 208232 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 96157 gaggacgaggaggaggaagag 96177
>gb|AC166487.6| Mus musculus chromosome 1, clone RP23-298A7, complete sequence Length = 187404 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 cgagtacgaggacgaggaggaggaa 189 |||| |||||||||||||||||||| Sbjct: 114709 cgaggacgaggacgaggaggaggaa 114685 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaagagctggacgag 201 ||||||||||||| ||||||||| ||||||| Sbjct: 114737 acgaggacgaggacgaggaagaggaggacgag 114706
>ref|XM_523601.1| PREDICTED: Pan troglodytes hypothetical protein XP_523601 (LOC468210), mRNA Length = 2181 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 2062 gaggacgaggaggaggaagag 2082 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 165 cgagtacgaggacgaggaggaggaagagc 193 |||| ||||||||||||||||||| |||| Sbjct: 660 cgaggacgaggacgaggaggaggaggagc 688
>ref|XM_480123.1| Oryza sativa (japonica cultivar-group), mRNA Length = 678 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgaggacgaggaggaggaaga 191 ||||||||||||||||||||| Sbjct: 567 cgaggacgaggaggaggaaga 587
>ref|XM_470029.1| Oryza sativa (japonica cultivar-group), mRNA Length = 372 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaag 190 ||||||||||||||||||||| Sbjct: 310 acgaggacgaggaggaggaag 290
>ref|NM_194693.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0020E23.10), mRNA Length = 1728 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 160 gagttcgagtacgaggacgaggaggagga 188 ||||||||||| ||||||||||| ||||| Sbjct: 1675 gagttcgagtatgaggacgaggacgagga 1703
>ref|XM_467036.1| Oryza sativa (japonica cultivar-group), mRNA Length = 791 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cgaggacgaggaggaggaaga 191 ||||||||||||||||||||| Sbjct: 127 cgaggacgaggaggaggaaga 107
>ref|XM_463235.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1482 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 gccgacgccgccgagcccgccgccg 85 ||||||||||||||| ||||||||| Sbjct: 77 gccgacgccgccgaggccgccgccg 53
>ref|NM_190988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1194 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 gccgacgccgccgagcccgccgccg 85 |||| |||||||||||||||||||| Sbjct: 631 gccgtcgccgccgagcccgccgccg 655
>ref|XM_472326.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 tcgagtacgaggacgaggaggagga 188 ||||| ||||||||||||||||||| Sbjct: 206 tcgaggacgaggacgaggaggagga 230
>ref|NM_012951.1| Rattus norvegicus fibroblast growth factor 10 (Fgf10), mRNA Length = 648 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 185 gaggacgaggaggaggaagag 165
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaagagct 194 ||||||||||||| ||||||||||| Sbjct: 106409 acgaggacgaggacgaggaagagct 106433
>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03 map E1419S, complete sequence Length = 150945 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 gccgacgccgccgagcccgccgccg 85 ||||||||||||||| ||||||||| Sbjct: 36943 gccgacgccgccgaggccgccgccg 36919
>gb|BC053148.1| Danio rerio zgc:63922, mRNA (cDNA clone MGC:63922 IMAGE:6790764), complete cds Length = 1278 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 769 gaggacgaggaggaggaagag 789
>ref|NM_018749.1| Mus musculus eukaryotic translation initiation factor 3, subunit 7 (zeta) (Eif3s7), mRNA Length = 1849 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 1693 gaggacgaggaggaggaagag 1713
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 gacgaggaggaggaagagctggacg 199 |||||||| |||||||||||||||| Sbjct: 1347288 gacgaggacgaggaagagctggacg 1347264
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 ccatggccgacgccgccgagcccgccgcc 84 |||||||| ||||||| |||||||||||| Sbjct: 4042189 ccatggccaacgccgcagagcccgccgcc 4042217
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaag 190 ||||||||||||||||||||| Sbjct: 33418594 acgaggacgaggaggaggaag 33418574 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 gccgacgccgccgagcccgccgccg 85 ||||||||||||||| ||||||||| Sbjct: 23588860 gccgacgccgccgaggccgccgccg 23588836 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaagagctggacgagccggcggc 209 ||||||| ||||||||||||||| ||| ||| ||||||| Sbjct: 10538831 acgaggaggaggaggaggaagaggaggaggaggcggcggc 10538870 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 caaccatggccgacgccgcc 72 |||||||||||||||||||| Sbjct: 5601662 caaccatggccgacgccgcc 5601681
>ref|XM_838056.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0972) partial mRNA Length = 1851 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaagagct 194 ||||||||||||| ||||||||||| Sbjct: 830 acgaggacgaggacgaggaagagct 854
>ref|XM_447676.1| Candida glabrata CBS138 hypothetical protein (CAGL0I09856g) partial mRNA Length = 825 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 165 cgagtacgaggacgaggaggaggaagagc 193 |||||||||||||||||| ||||| |||| Sbjct: 177 cgagtacgaggacgaggacgaggaggagc 205
>gb|AC114821.4| Mus musculus BAC clone RP23-72K1 from chromosome 1, complete sequence Length = 197978 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 27319 gaggacgaggaggaggaagag 27339
>ref|XM_805113.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504071.60) partial mRNA Length = 993 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 337 gaggacgaggaggaggaagag 357
>ref|XM_859533.1| PREDICTED: Canis familiaris bZIP protein, transcript variant 6 (LCR-F1), mRNA Length = 2894 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 2029 gaggacgaggaggaggaagag 2009
>ref|XM_859516.1| PREDICTED: Canis familiaris bZIP protein, transcript variant 5 (LCR-F1), mRNA Length = 2861 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 1996 gaggacgaggaggaggaagag 1976
>ref|XM_537663.2| PREDICTED: Canis familiaris bZIP protein, transcript variant 1 (LCR-F1), mRNA Length = 2658 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 1793 gaggacgaggaggaggaagag 1773
>ref|XM_859481.1| PREDICTED: Canis familiaris bZIP protein, transcript variant 4 (LCR-F1), mRNA Length = 2696 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 1831 gaggacgaggaggaggaagag 1811
>ref|XM_846772.1| PREDICTED: Canis familiaris bZIP protein, transcript variant 3 (LCR-F1), mRNA Length = 2984 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 2119 gaggacgaggaggaggaagag 2099
>emb|CR381531.7| Zebrafish DNA sequence from clone DKEY-190G6 in linkage group 23, complete sequence Length = 149672 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 91219 gaggacgaggaggaggaagag 91239
>gb|AC122906.4| Mus musculus BAC clone RP23-47D11 from 10, complete sequence Length = 191190 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 130930 gaggacgaggaggaggaagag 130950
>gb|AC108812.9| Mus musculus chromosome 18, clone RP23-417M2, complete sequence Length = 202340 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagagctgg 196 ||||| ||||||||||||||||||| Sbjct: 23377 gaggaggaggaggaggaagagctgg 23401
>gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome 13, complete sequence Length = 211181 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 197540 gaggacgaggaggaggaagag 197560
>gb|BC020591.1| Homo sapiens transmembrane protein 132E, mRNA (cDNA clone IMAGE:4421249), partial cds Length = 3336 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 2089 gaggacgaggaggaggaagag 2109
>emb|Z98748.1|HS381E2 Human DNA sequence from clone RP3-381E2 on chromosome 6p12, complete sequence Length = 111398 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 69721 gaggacgaggaggaggaagag 69701
>gb|BC018318.1| Homo sapiens transmembrane protein 132E, mRNA (cDNA clone IMAGE:4154275), partial cds Length = 2115 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 860 gaggacgaggaggaggaagag 880
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 gccgccgagcccgccgccggccaga 91 ||||||||||||| ||||||||||| Sbjct: 2674004 gccgccgagcccggcgccggccaga 2673980 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 gccgccgagcccgccgccggccag 90 ||||||||||||| |||||||||| Sbjct: 2808503 gccgccgagcccgacgccggccag 2808480
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 321 ggagctcatcgaggcggaggtcgcc 345 ||||| ||||||||||||||||||| Sbjct: 857331 ggagcgcatcgaggcggaggtcgcc 857307
>emb|AL390755.5| Human DNA sequence from clone RP11-472K17 on chromosome 13 Contains a novel gene, the 3' end of the COL4A1 gene for collagen type IV alpha 1 and a CpG island, complete sequence Length = 186120 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 151526 gaggacgaggaggaggaagag 151546
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 cgccgagcccgccgccggcca 89 ||||||||||||||||||||| Sbjct: 319832 cgccgagcccgccgccggcca 319812
>emb|AL121983.13|HSA160H22 Human DNA sequence from clone RP11-160H22 on chromosome 1q23.2-24.3 Contains three novel genes, a ribosomal protein L30 (RPL30) pseudogene, the 3' end of a novel gene, the 5' end of a novel gene (KIAA2025) and a CpG island, complete sequence Length = 165436 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 35630 gaggacgaggaggaggaagag 35610
>emb|AL031291.3|HS796F18 Human DNA sequence from clone RP4-796F18 on chromosome 1p36.11-36.33 Contains the gene for transitional epithelia response protein (TERE1) and a ubiquitin-conjugating enzyme E2 variant 2 (UBE2V2) pseudogene, complete sequence Length = 118968 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 71865 gaggacgaggaggaggaagag 71845
>gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's Hospital Oakland Research Institute) complete sequence Length = 221396 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 14498 gaggacgaggaggaggaagag 14518
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 160 gagttcgagtacgaggacgaggaggagga 188 ||||||||||| ||||||||||| ||||| Sbjct: 1674358 gagttcgagtatgaggacgaggacgagga 1674330 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gaggaggaggaagagctgga 197 |||||||||||||||||||| Sbjct: 394851 gaggaggaggaagagctgga 394870
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 165 cgagtacgaggacgaggaggaggaagagc 193 |||||||||||||||||| ||||| |||| Sbjct: 942233 cgagtacgaggacgaggacgaggaggagc 942261
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 gcgccgcggccgaggccagcg 406 ||||||||||||||||||||| Sbjct: 340218 gcgccgcggccgaggccagcg 340198
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 gcgccgcggccgaggccagcg 406 ||||||||||||||||||||| Sbjct: 252939 gcgccgcggccgaggccagcg 252919
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gcgccgcggccgaggccagcg 406 ||||||||||||||||||||| Sbjct: 297133 gcgccgcggccgaggccagcg 297153
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 167 agtacgaggacgaggaggaggaaga 191 |||||||||||||||| |||||||| Sbjct: 152618 agtacgaggacgaggacgaggaaga 152642
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01, complete sequence Length = 143157 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaag 190 ||||||||||||||||||||| Sbjct: 38864 acgaggacgaggaggaggaag 38884
>emb|AL645910.8| Mouse DNA sequence from clone RP23-173M6 on chromosome 11 Contains the 5' end of a novel gene, the Mtmr3 gene for myotubularin related protein 3 and a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, complete sequence Length = 204413 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 66443 gaggacgaggaggaggaagag 66423
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaag 190 ||||||||||||||||||||| Sbjct: 135934 acgaggacgaggaggaggaag 135954
>emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on chromosome 11 Contains the Myo18a gene for myosin XVIIIa, the Pipox gene for pipecolic acid oxidase, a novel gene (LOC327969), the 5' end of the Sez6 gene for seizure related gene 6 and two CpG islands, complete sequence Length = 220176 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 98323 gaggacgaggaggaggaagag 98303
>emb|AJ505819.1|HSU505819 Hylomys suillus partial adra2b gene for alpha 2B adrenergic receptor Length = 1173 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 856 gaggacgaggaggaggaagag 876
>ref|NM_207313.1| Homo sapiens transmembrane protein 132E (TMEM132E), mRNA Length = 4369 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 3164 gaggacgaggaggaggaagag 3184
>gb|AC115458.5| Rattus norvegicus 13 BAC CH230-190J23 (Children's Hospital Oakland Research Institute) complete sequence Length = 69404 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 aggacgaggaggaggaagagctggacgag 201 |||| ||||||||||||||| |||||||| Sbjct: 49932 aggaagaggaggaggaagaggtggacgag 49960
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 gccgacgccgccgagcccgccgccg 85 |||| |||||||||||||||||||| Sbjct: 2366017 gccgccgccgccgagcccgccgccg 2365993
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 2535706 gaggacgaggaggaggaagag 2535726
>gb|AE011737.1| Xanthomonas axonopodis pv. citri str. 306, section 115 of 469 of the complete genome Length = 10029 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 gaagagctggacgagccggcg 207 ||||||||||||||||||||| Sbjct: 3524 gaagagctggacgagccggcg 3544
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 1826218 gaggacgaggaggaggaagag 1826198
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 gccgacgccgccgagcccgccgccg 85 |||| |||||||||||||||||||| Sbjct: 4706359 gccgccgccgccgagcccgccgccg 4706335
>gb|AC025098.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0020E23, complete sequence Length = 151359 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 160 gagttcgagtacgaggacgaggaggagga 188 ||||||||||| ||||||||||| ||||| Sbjct: 71455 gagttcgagtatgaggacgaggacgagga 71427
>ref|XM_944290.1| PREDICTED: Homo sapiens KIAA0492 protein (KIAA0492), mRNA Length = 6254 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 367 gaggacgaggaggaggaagag 387
>ref|XM_378914.2| PREDICTED: Homo sapiens KIAA0492 protein (KIAA0492), mRNA Length = 6253 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 367 gaggacgaggaggaggaagag 387
>dbj|AK145689.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0029K07 product:eukaryotic translation initiation factor 3, subunit 7 (zeta), full insert sequence Length = 1861 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 1707 gaggacgaggaggaggaagag 1727
>dbj|AK168256.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730073F13 product:eukaryotic translation initiation factor 3, subunit 7 (zeta), full insert sequence Length = 1897 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 1742 gaggacgaggaggaggaagag 1762
>gb|S54914.1| bup=5'of bmi-1 proviral insertion locus [mice, Genomic/mRNA, 2022 nt]; and translated products Length = 2022 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 cgccgcggccgaggccagcgc 407 ||||||||||||||||||||| Sbjct: 727 cgccgcggccgaggccagcgc 747
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaag 190 ||||||||||||||||||||| Sbjct: 79517 acgaggacgaggaggaggaag 79537
>gb|AC154636.2| Mus musculus BAC clone RP23-302E1 from chromosome 12, complete sequence Length = 179631 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 26621 gaggacgaggaggaggaagag 26601
>dbj|AK049767.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530047H05 product:EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 (EIF-3 ZETA) (EIF3 P66) homolog [Homo sapiens], full insert sequence Length = 1849 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 1691 gaggacgaggaggaggaagag 1711
>dbj|AK045228.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130049K07 product:eukaryotic translation initiation factor 3, subunit 7 (zeta, 66/67 kDa), full insert sequence Length = 1850 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 1694 gaggacgaggaggaggaagag 1714
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaag 190 ||||||||||||||||||||| Sbjct: 29999182 acgaggacgaggaggaggaag 29999202 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 tcgagtacgaggacgaggaggagga 188 ||||| ||||||||||||||||||| Sbjct: 19492729 tcgaggacgaggacgaggaggagga 19492705 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 caaccatggccgacgccgcc 72 |||||||||||||||||||| Sbjct: 19434251 caaccatggccgacgccgcc 19434270 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 caaccatggccgacgccgcc 72 |||||||||||||||||||| Sbjct: 6964885 caaccatggccgacgccgcc 6964866 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 caaccatggccgacgccgcc 72 |||||||||||||||||||| Sbjct: 6913328 caaccatggccgacgccgcc 6913347
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 160 gagttcgagtacgaggacgaggaggagga 188 ||||||||||| ||||||||||| ||||| Sbjct: 1674358 gagttcgagtatgaggacgaggacgagga 1674330 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 caaccatggccgacgccgcc 72 |||||||||||||||||||| Sbjct: 11073534 caaccatggccgacgccgcc 11073515 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gaggaggaggaagagctgga 197 |||||||||||||||||||| Sbjct: 394851 gaggaggaggaagagctgga 394870
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cgaggacgaggaggaggaaga 191 ||||||||||||||||||||| Sbjct: 2962129 cgaggacgaggaggaggaaga 2962109 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 caaccatggccgacgccgcc 72 |||||||||||||||||||| Sbjct: 13375948 caaccatggccgacgccgcc 13375967 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 caaccatggccgacgccgcc 72 |||||||||||||||||||| Sbjct: 379741 caaccatggccgacgccgcc 379722
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaag 190 ||||||||||||||||||||| Sbjct: 33509104 acgaggacgaggaggaggaag 33509084 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 gccgacgccgccgagcccgccgccg 85 ||||||||||||||| ||||||||| Sbjct: 23581888 gccgacgccgccgaggccgccgccg 23581864 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 170 acgaggacgaggaggaggaagagctggacgagccggcggc 209 ||||||| ||||||||||||||| ||| ||| ||||||| Sbjct: 10536932 acgaggaggaggaggaggaagaggaggaggaggcggcggc 10536971 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 caaccatggccgacgccgcc 72 |||||||||||||||||||| Sbjct: 5600877 caaccatggccgacgccgcc 5600896
>emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039F02, complete sequence Length = 122499 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 tcgagtacgaggacgaggaggagga 188 ||||| ||||||||||||||||||| Sbjct: 13376 tcgaggacgaggacgaggaggagga 13352
>ref|NM_199884.1| Danio rerio zgc:63922 (zgc:63922), mRNA Length = 1278 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 769 gaggacgaggaggaggaagag 789
>gb|AC110605.5| Homo sapiens chromosome 17, clone CTD-2317L23, complete sequence Length = 60418 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 49473 gaggacgaggaggaggaagag 49453
>gb|AC006508.2|AC006508 Mus musculus Yp BAC GSMB-187H15 (Genome Systems Mouse BAC Library) complete sequence Length = 185286 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 33325 gaggacgaggaggaggaagag 33305
>dbj|AK191549.1| Mus musculus cDNA, clone:Y1G0106D20, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000016698, based on BLAT search Length = 209 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 49 gaggacgaggaggaggaagag 69
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tcttcccccaaaccccaacca 58 ||||||||||||||||||||| Sbjct: 4054584 tcttcccccaaaccccaacca 4054604
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 323 agctcatcgaggcggaggtcgccgacctc 351 |||||| |||||||||||| ||||||||| Sbjct: 349452 agctcagcgaggcggaggtggccgacctc 349480
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 gtacgaggacgaggaggaggaagag 192 ||||||||| ||||||||||||||| Sbjct: 27906 gtacgaggaggaggaggaggaagag 27930
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 gtacgaggacgaggaggaggaagag 192 ||||||||| ||||||||||||||| Sbjct: 105222 gtacgaggaggaggaggaggaagag 105246
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 156 ggaggagttcgagtacgaggacgaggaggagga 188 |||||||| |||| ||||||| ||||||||||| Sbjct: 67352 ggaggagtgcgaggacgaggaggaggaggagga 67384
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cgaggacgaggaggaggaaga 191 ||||||||||||||||||||| Sbjct: 57593 cgaggacgaggaggaggaaga 57573
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cgaggacgaggaggaggaaga 191 ||||||||||||||||||||| Sbjct: 114020 cgaggacgaggaggaggaaga 114000
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cgaggacgaggaggaggaaga 191 ||||||||||||||||||||| Sbjct: 135191 cgaggacgaggaggaggaaga 135171
>dbj|AB128936.1| Mus musculus Phgdh gene for 3-phosphoglycerate dehydrogenase, complete cds Length = 30123 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 25555 gaggacgaggaggaggaagag 25535
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cgaggacgaggaggaggaaga 191 ||||||||||||||||||||| Sbjct: 12852 cgaggacgaggaggaggaaga 12832
>dbj|AK105235.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-H09, full insert sequence Length = 2452 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 gccgacgccgccgagcccgccgccg 85 |||| |||||||||||||||||||| Sbjct: 1432 gccgtcgccgccgagcccgccgccg 1456
>dbj|AK101761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064B15, full insert sequence Length = 1888 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 160 gagttcgagtacgaggacgaggaggagga 188 ||||||||||| ||||||||||| ||||| Sbjct: 1459 gagttcgagtatgaggacgaggacgagga 1487
>emb|AL512791.3|CNS07EFF Human chromosome 14 DNA sequence BAC R-471B22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 178834 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 29520 gaggacgaggaggaggaagag 29540
>dbj|AK067828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120N01, full insert sequence Length = 790 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cgaggacgaggaggaggaaga 191 ||||||||||||||||||||| Sbjct: 126 cgaggacgaggaggaggaaga 106
>gb|AC145393.4| Mus musculus BAC clone RP24-208N6 from Y, complete sequence Length = 167299 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 60863 gaggacgaggaggaggaagag 60883
>dbj|AK063313.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-G05, full insert sequence Length = 2050 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 acgaggacgaggaggaggaag 190 ||||||||||||||||||||| Sbjct: 184 acgaggacgaggaggaggaag 164
>dbj|AK058749.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H07, full insert sequence Length = 1331 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 156 ggaggagttcgagtacgaggacgaggaggagga 188 |||||||| |||| ||||||| ||||||||||| Sbjct: 184 ggaggagtgcgaggacgaggaggaggaggagga 216
>tpe|BN000149.1|HSA000149 TPA: TPA_inf: Homo sapiens mRNA for hypothetical protein Length = 4369 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 3164 gaggacgaggaggaggaagag 3184
>emb|AL450341.10| Mouse DNA sequence from clone RP23-401L17 on chromosome 2, complete sequence Length = 214573 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 138459 gaggacgaggaggaggaagag 138439
>emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chromosome 7, complete sequence Length = 152730 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 125165 gaggacgaggaggaggaagag 125185
>emb|AL161662.6|CNS01RH6 Human chromosome 14 DNA sequence BAC R-439L12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 197369 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 177506 gaggacgaggaggaggaagag 177526
>gb|AC005691.1|AC005691 Homo sapiens chromosome 17, clone hRPK.28_A_22, complete sequence Length = 156821 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 10099 gaggacgaggaggaggaagag 10079
>gb|AF066861.1|AF066861 Gallus gallus homeodomain protein (HB9) mRNA, complete cds Length = 1481 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgaggacgaggaggaggaaga 191 ||||||||||||||||||||| Sbjct: 894 cgaggacgaggaggaggaaga 914
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 368 ccgtgcaggacctgctgagcgccgc 392 |||||||||| |||||||||||||| Sbjct: 313790 ccgtgcaggagctgctgagcgccgc 313766
>ref|NM_204928.1| Gallus gallus homeobox HB9 (HLXB9), mRNA Length = 1481 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgaggacgaggaggaggaaga 191 ||||||||||||||||||||| Sbjct: 894 cgaggacgaggaggaggaaga 914
>emb|CT572990.6| Mouse DNA sequence from clone RP24-393N9 on chromosome 12, complete sequence Length = 90243 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 61628 gaggacgaggaggaggaagag 61648
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 160 gagttcgagtacgaggacgaggaggagga 188 ||||||||||| ||||||||||| ||||| Sbjct: 1674309 gagttcgagtatgaggacgaggacgagga 1674281 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 caaccatggccgacgccgcc 72 |||||||||||||||||||| Sbjct: 11079974 caaccatggccgacgccgcc 11079955 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gaggaggaggaagagctgga 197 |||||||||||||||||||| Sbjct: 394848 gaggaggaggaagagctgga 394867
>gb|AC140553.3| Mus musculus BAC clone RP24-71M17 from 1, complete sequence Length = 217538 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 148245 gaggacgaggaggaggaagag 148265
>gb|AC135083.4| Mus musculus BAC clone RP24-238A21 from 14, complete sequence Length = 179469 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 124710 gaggacgaggaggaggaagag 124730
>gb|AC125371.4| Mus musculus BAC clone RP24-401O6 from 16, complete sequence Length = 194685 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 167 agtacgaggacgaggaggaggaaga 191 |||||||||| |||||||||||||| Sbjct: 151511 agtacgaggaagaggaggaggaaga 151535
>gb|AC121845.3| Mus musculus BAC clone RP24-82B23 from 5, complete sequence Length = 217530 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 128048 gaggacgaggaggaggaagag 128068
>gb|BC018598.1| Mus musculus eukaryotic translation initiation factor 3, subunit 7 (zeta), mRNA (cDNA clone IMAGE:3587522) Length = 1885 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gaggacgaggaggaggaagag 192 ||||||||||||||||||||| Sbjct: 1690 gaggacgaggaggaggaagag 1710 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,568,325 Number of Sequences: 3902068 Number of extensions: 4568325 Number of successful extensions: 189104 Number of sequences better than 10.0: 593 Number of HSP's better than 10.0 without gapping: 613 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 179373 Number of HSP's gapped (non-prelim): 9642 length of query: 430 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 408 effective length of database: 17,147,199,772 effective search space: 6996057506976 effective search space used: 6996057506976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)