ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart52g10 |
|---|---|
| Clone Library Name | barley_pub |
>PIP1_LYCES (Q08451) Probable aquaporin PIP-type pTOM75 (Ripening-associated| membrane protein) (RAMP) Length = 286 Score = 29.3 bits (64), Expect = 3.3 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = +3 Query: 3 KEPPPAPLLEPG 38 KEPPPAPL EPG Sbjct: 33 KEPPPAPLFEPG 44
>PIP12_ARATH (Q06611) Aquaporin PIP1.2 (Plasma membrane intrinsic protein 1b)| (PIP1b) (Transmembrane protein A) (TMP-A) (AthH2) Length = 286 Score = 29.3 bits (64), Expect = 3.3 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = +3 Query: 3 KEPPPAPLLEPG 38 KEPPPAPL EPG Sbjct: 32 KEPPPAPLFEPG 43
>PIP11_ORYSA (Q6EU94) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)| (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) Length = 289 Score = 29.3 bits (64), Expect = 3.3 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = +3 Query: 3 KEPPPAPLLEPG 38 KEPPPAPL EPG Sbjct: 35 KEPPPAPLFEPG 46
>PIP14_ARATH (Q39196) Probable aquaporin PIP1.4 (Plasma membrane intrinsic| protein 1.4) (Transmembrane protein C) (TMP-C) Length = 287 Score = 29.3 bits (64), Expect = 3.3 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = +3 Query: 3 KEPPPAPLLEPG 38 KEPPPAPL EPG Sbjct: 33 KEPPPAPLFEPG 44
>PIP13_ARATH (Q08733) Aquaporin PIP1.3 (Plasma membrane intrinsic protein 1c)| (PIP1c) (Transmembrane protein B) (TMP-B) Length = 286 Score = 27.7 bits (60), Expect = 9.7 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = +3 Query: 3 KEPPPAPLLEPG 38 KEPPPAP EPG Sbjct: 32 KEPPPAPFFEPG 43
>PIP11_VICFA (P61838) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)| (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1) Length = 286 Score = 27.7 bits (60), Expect = 9.7 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = +3 Query: 3 KEPPPAPLLEPG 38 KEPPPAP EPG Sbjct: 32 KEPPPAPFFEPG 43
>PIP11_ARATH (P61837) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)| (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1) Length = 286 Score = 27.7 bits (60), Expect = 9.7 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = +3 Query: 3 KEPPPAPLLEPG 38 KEPPPAP EPG Sbjct: 32 KEPPPAPFFEPG 43
>PIP15_ARATH (Q8LAA6) Probable aquaporin PIP1.5 (Plasma membrane intrinsic| protein 1d) (PIP1d) Length = 287 Score = 27.7 bits (60), Expect = 9.7 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = +3 Query: 3 KEPPPAPLLEPG 38 KEPPPAP EPG Sbjct: 33 KEPPPAPFFEPG 44 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.278 0.0819 0.188 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,792,677 Number of Sequences: 219361 Number of extensions: 23707 Number of successful extensions: 28 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 28 length of database: 80,573,946 effective HSP length: 0 effective length of database: 80,573,946 effective search space used: 1933774704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 18 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 45 (21.6 bits)
