ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart52g10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein Length = 1225 Score = 67.9 bits (34), Expect = 1e-09 Identities = 37/38 (97%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcccggc 38 |||||||||||||||||||||||||| ||||||||||| Sbjct: 168 acaaggagcccccgccggcgccgctgttcgagcccggc 205
>gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence Length = 1154 Score = 65.9 bits (33), Expect = 4e-09 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcccgg 37 |||||||||||||||||||||||||| |||||||||| Sbjct: 60 acaaggagcccccgccggcgccgctgttcgagcccgg 96
>gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein ZmPIP1-4 mRNA, complete cds Length = 1153 Score = 65.9 bits (33), Expect = 4e-09 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcccgg 37 |||||||||||||||||||||||||| |||||||||| Sbjct: 210 acaaggagcccccgccggcgccgctgttcgagcccgg 246
>gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein ZmPIP1-3 mRNA, complete cds Length = 1296 Score = 65.9 bits (33), Expect = 4e-09 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcccgg 37 |||||||||||||||||||||||||| |||||||||| Sbjct: 205 acaaggagcccccgccggcgccgctgttcgagcccgg 241
>gb|AY103580.1| Zea mays PCO072544 mRNA sequence Length = 1633 Score = 65.9 bits (33), Expect = 4e-09 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcccgg 37 |||||||||||||||||||||||||| |||||||||| Sbjct: 534 acaaggagcccccgccggcgccgctgttcgagcccgg 570
>gb|AF131201.1| Zea mays plasma membrane MIP protein (pip1-2) mRNA, complete cds Length = 1280 Score = 65.9 bits (33), Expect = 4e-09 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcccgg 37 |||||||||||||||||||||||||| |||||||||| Sbjct: 161 acaaggagcccccgccggcgccgctgttcgagcccgg 197
>gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-1) mRNA, complete cds Length = 1086 Score = 58.0 bits (29), Expect = 1e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcccgg 37 ||||||||||||||||||||||||| |||||||||| Sbjct: 98 acaaggagcccccgccggcgccgctcttcgagcccgg 134
>emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein Length = 1169 Score = 58.0 bits (29), Expect = 1e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcccgg 37 ||||||||||||||||||||||||| |||||||||| Sbjct: 158 acaaggagcccccgccggcgccgctcttcgagcccgg 194
>ref|XM_473480.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 849 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 79 acaaggagccgccgccggcgccgctgttcgagcc 112
>emb|Y08962.1|OSTRAMBPR O.sativa mRNA for transmembrane protein Length = 1179 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 163 acaaggagccgccgccggcgccgctgttcgagcc 196
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 27246 acaaggagccgccgccggcgccgctgttcgagcc 27279
>emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complete CDS Length = 1139 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 125 acaaggagccgccgccggcgccgctgttcgagcc 158
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 28020021 acaaggagccgccgccggcgccgctgttcgagcc 28020054
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 27063045 acaaggagccgccgccggcgccgctgttcgagcc 27063078 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgctc 29 ||||||||||||||||||| Sbjct: 4825426 cccgccggcgccgctgctc 4825444 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 8 gcccccgccggcgccgctgctc 29 |||||||||| ||||||||||| Sbjct: 11183039 gcccccgccgccgccgctgctc 11183018 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 8 gcccccgccggcgccgctgctc 29 |||||||||| ||||||||||| Sbjct: 4911228 gcccccgccgccgccgctgctc 4911207 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgct 28 |||||||||||||||||| Sbjct: 4829889 cccgccggcgccgctgct 4829906
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 34694 acaaggagccgccgccggcgccgctgttcgagcc 34727
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 116247 acaaggagccgccgccggcgccgctgttcgagcc 116280
>dbj|AK109319.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-G11, full insert sequence Length = 1128 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 158 acaaggagccgccgccggcgccgctgttcgagcc 191
>dbj|AK104736.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D02, full insert sequence Length = 1163 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 157 acaaggagccgccgccggcgccgctgttcgagcc 190
>dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D06, full insert sequence Length = 1128 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 158 acaaggagccgccgccggcgccgctgttcgagcc 191
>dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A07, full insert sequence Length = 1205 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 213 acaaggagccgccgccggcgccgctgttcgagcc 246
>dbj|AK098849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E16, full insert sequence Length = 1164 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 158 acaaggagccgccgccggcgccgctgttcgagcc 191
>dbj|AK065188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E02, full insert sequence Length = 1167 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 160 acaaggagccgccgccggcgccgctgttcgagcc 193
>dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C05, full insert sequence Length = 1136 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 158 acaaggagccgccgccggcgccgctgttcgagcc 191
>dbj|AK058323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B07, full insert sequence Length = 1462 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 456 acaaggagccgccgccggcgccgctgttcgagcc 489
>gb|U77297.1|OSU77297 Oryza sativa transmembrane protein mRNA, complete cds Length = 1179 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 163 acaaggagccgccgccggcgccgctgttcgagcc 196
>dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for water channel protein, complete cds Length = 1116 Score = 52.0 bits (26), Expect = 7e-05 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| ||||||||||||||| ||||||| Sbjct: 156 acaaggagccgccgccggcgccgctgttcgagcc 189
>dbj|AB009309.2| Hordeum vulgare HvPIP1;5 mRNA, complete cds Length = 1147 Score = 50.1 bits (25), Expect = 3e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcccgg 37 |||||||||| |||||||||||||| |||||||||| Sbjct: 183 acaaggagccgccgccggcgccgctcttcgagcccgg 219
>emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intrinsic protein (pip4 gene) Length = 1364 Score = 48.1 bits (24), Expect = 0.001 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgag 32 |||||||||| ||||||||||||||| ||||| Sbjct: 179 acaaggagcctccgccggcgccgctgttcgag 210
>gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein ZmPIP1-5 mRNA, complete cds Length = 1338 Score = 48.1 bits (24), Expect = 0.001 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgag 32 |||||||||| ||||||||||||||| ||||| Sbjct: 170 acaaggagcctccgccggcgccgctgttcgag 201
>gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, complete cds Length = 1140 Score = 44.1 bits (22), Expect = 0.016 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| |||||||||||||| ||||||| Sbjct: 153 acaaggagccgccgccggcgccgcttttcgagcc 186
>gb|U26537.1|MCU26537 Mesembryanthemum crystallinum major intrinsic protein homolog (mipD) mRNA, complete cds Length = 1135 Score = 44.1 bits (22), Expect = 0.016 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 |||||||||| || |||||||||||| ||||||| Sbjct: 153 acaaggagccaccaccggcgccgctgttcgagcc 186
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cgccggcgccgctgctcgagc 33 ||||||||||||||||||||| Sbjct: 285443 cgccggcgccgctgctcgagc 285423
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccggcgccgctgctcgagcc 34 |||||||||||||||||||| Sbjct: 3023568 ccggcgccgctgctcgagcc 3023587
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 0.25 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 agcccccgccggcgccgctgctcg 30 |||||||| ||||||||||||||| Sbjct: 2422255 agcccccggcggcgccgctgctcg 2422232
>ref|XM_464378.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1530 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgctc 29 ||||||||||||||||||| Sbjct: 1104 cccgccggcgccgctgctc 1122
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcga 31 ||||||||||||||||||| Sbjct: 1216849 cgccggcgccgctgctcga 1216867
>ref|NM_189437.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2859 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 11 cccgccggcgccgctgctc 29 ||||||||||||||||||| Sbjct: 1198 cccgccggcgccgctgctc 1180
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08, complete sequence Length = 136853 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcga 31 ||||||||||||||||||| Sbjct: 115063 cgccggcgccgctgctcga 115081
>gb|AC109645.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09, complete sequence Length = 43883 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcga 31 ||||||||||||||||||| Sbjct: 23725 cgccggcgccgctgctcga 23743
>ref|XM_542074.2| PREDICTED: Canis familiaris similar to intercellular adhesion molecule 5 precursor (LOC484958), mRNA Length = 2769 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gagcccccgccggcgccgc 24 ||||||||||||||||||| Sbjct: 2681 gagcccccgccggcgccgc 2663
>gb|AF411228.1|AF411228 Hordeum vulgare ascorbate peroxidase mRNA, complete cds Length = 1138 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 12 ccgccggcgccgctgctcgagcc 34 |||||||||||||||||| |||| Sbjct: 55 ccgccggcgccgctgctccagcc 77
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcga 31 ||||||||||||||||||| Sbjct: 18256466 cgccggcgccgctgctcga 18256484
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgctc 29 ||||||||||||||||||| Sbjct: 42750080 cccgccggcgccgctgctc 42750098
>gb|AF326490.1|AF326490 Zea mays plasma membrane integral protein ZmPIP1-6 mRNA, complete cds Length = 1325 Score = 38.2 bits (19), Expect = 1.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 6 gagcccccgccggcgccgctgctcgag 32 ||||||||| ||||||||||| ||||| Sbjct: 322 gagcccccggcggcgccgctgttcgag 348
>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1656_A11 Length = 148887 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgctc 29 ||||||||||||||||||| Sbjct: 82845 cccgccggcgccgctgctc 82863
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 ccggcgccgctgctcgagc 33 ||||||||||||||||||| Sbjct: 3907217 ccggcgccgctgctcgagc 3907199 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 cggcgccgctgctcgagcc 34 ||||||||||||||||||| Sbjct: 2100295 cggcgccgctgctcgagcc 2100313 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 cggcgccgctgctcgagc 33 |||||||||||||||||| Sbjct: 3570506 cggcgccgctgctcgagc 3570489 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 6 gagcccccgccggcgccgctgc 27 |||||| ||||||||||||||| Sbjct: 32994 gagcccgcgccggcgccgctgc 33015
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgctc 29 ||||||||||||||||||| Sbjct: 106016 cccgccggcgccgctgctc 106034 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgct 28 |||||||||||||||||| Sbjct: 110479 cccgccggcgccgctgct 110496
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgctc 29 ||||||||||||||||||| Sbjct: 67585 cccgccggcgccgctgctc 67603 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgct 28 |||||||||||||||||| Sbjct: 72048 cccgccggcgccgctgct 72065
>dbj|AK109915.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-C06, full insert sequence Length = 1961 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcga 31 ||||||||||||||||||| Sbjct: 224 cgccggcgccgctgctcga 242
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcga 31 ||||||||||||||||||| Sbjct: 18415747 cgccggcgccgctgctcga 18415765
>ref|XM_511711.1| PREDICTED: Pan troglodytes similar to Beta heavy chain of outer-arm axonemal dynein ATPase (LOC454924), mRNA Length = 14556 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 5 ggagcccccgccggcgccgctg 26 ||||||||||||||| |||||| Sbjct: 5668 ggagcccccgccggccccgctg 5689
>ref|XM_465060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 792 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 gcccccgccggcgccgctgctc 29 |||||||||| ||||||||||| Sbjct: 448 gcccccgccgccgccgctgctc 469
>ref|XM_464380.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1572 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgct 28 |||||||||||||||||| Sbjct: 1131 cccgccggcgccgctgct 1148
>ref|XM_506738.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1145_F01.17 mRNA Length = 1199 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 gcccccgccggcgccgctgctc 29 |||||||||| ||||||||||| Sbjct: 104 gcccccgccgccgccgctgctc 125
>ref|XM_464394.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1127 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 gcccccgccggcgccgctgctc 29 |||||||||| ||||||||||| Sbjct: 26 gcccccgccgccgccgctgctc 47
>ref|XM_450774.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2139 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 89 cgccggcgccgctgctcg 106
>ref|XM_479479.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1089 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 162 cgccggcgccgctgctcg 145
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 cccccgccggcgccgctg 26 |||||||||||||||||| Sbjct: 1060983 cccccgccggcgccgctg 1061000
>ref|XM_869347.1| PREDICTED: Bos taurus similar to protein phosphatase 1, regulatory (inhibitor) subunit 14C (LOC617148), partial mRNA Length = 687 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 20 gccgctgctcgagcccgg 37 |||||||||||||||||| Sbjct: 117 gccgctgctcgagcccgg 100
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccccgccggcgccgctgc 27 |||||||||||||||||| Sbjct: 26996 ccccgccggcgccgctgc 27013
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 agcccccgccggcgccgc 24 |||||||||||||||||| Sbjct: 2690670 agcccccgccggcgccgc 2690653
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 84408 cgccggcgccgctgctcg 84425
>ref|XM_603624.2| PREDICTED: Bos taurus similar to basic helix-loop-helix domain containing, class B, 5 (LOC525275), mRNA Length = 1884 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 9 cccccgccggcgccgctgctcg 30 ||||||||| |||||||||||| Sbjct: 1829 cccccgccgccgccgctgctcg 1808
>ref|NM_138944.2| Mus musculus POU domain, class 4, transcription factor 2 (Pou4f2), mRNA Length = 3212 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 6 gagcccccgccggcgccgctgc 27 |||||||||||| ||||||||| Sbjct: 505 gagcccccgccgccgccgctgc 484
>ref|XM_613853.2| PREDICTED: Bos taurus similar to FK506 binding protein 9 (LOC534182), mRNA Length = 2468 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 gcccccgccggcgccgctgctc 29 |||||||||| ||||||||||| Sbjct: 27 gcccccgccgccgccgctgctc 48
>gb|AC101757.12| Mus musculus chromosome 8, clone RP24-545I11, complete sequence Length = 148875 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 6 gagcccccgccggcgccgctgc 27 |||||||||||| ||||||||| Sbjct: 15446 gagcccccgccgccgccgctgc 15467
>gb|AC140286.3| Mus musculus BAC clone RP24-573E14 from chromosome 5, complete sequence Length = 164620 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 8 gcccccgccggcgccgctgctc 29 ||||||||||||||||| |||| Sbjct: 130662 gcccccgccggcgccgcggctc 130641
>gb|BC105407.1| Bos taurus FK506 binding protein 9, 63 kDa, mRNA (cDNA clone MGC:128053 IMAGE:7985263), complete cds Length = 2257 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 gcccccgccggcgccgctgctc 29 |||||||||| ||||||||||| Sbjct: 153 gcccccgccgccgccgctgctc 174
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccccgccggcgccgctgc 27 |||||||||||||||||| Sbjct: 24608864 ccccgccggcgccgctgc 24608847 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgctcgag 32 |||||||||| ||||||||||| Sbjct: 12503104 cccgccggcgtcgctgctcgag 12503125 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 9827924 cgccggcgccgctgctcg 9827941
>ref|XM_979000.1| PREDICTED: Mus musculus transmembrane protein 132B (Tmem132b), mRNA Length = 5062 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 8 gcccccgccggcgccgctgctc 29 ||||||||||||||||| |||| Sbjct: 200 gcccccgccggcgccgcggctc 179
>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1) gene, complete cds Length = 169976 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 23243 ccgccggcgccgctgctc 23226
>ref|XM_504087.1| Yarrowia lipolytica CLIB122, YALI0E18007g predicted mRNA Length = 765 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 5 ggagcccccgccggcgccgctg 26 |||||||||| ||||||||||| Sbjct: 606 ggagcccccggcggcgccgctg 585
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 gagcccccgccggcgccg 23 |||||||||||||||||| Sbjct: 3417441 gagcccccgccggcgccg 3417424
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03, from chromosome 3, complete sequence Length = 124550 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 11 cccgccggcgccgctgctcgag 32 |||||||||| ||||||||||| Sbjct: 84837 cccgccggcgtcgctgctcgag 84816
>emb|X63901.1|HSTCF1G Homo sapiens TCF-1 gene Length = 2855 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 gagcccccgccggcgccg 23 |||||||||||||||||| Sbjct: 53 gagcccccgccggcgccg 70
>gb|AY883558.1| Zea diploperennis cultivar Iltis et al 1250 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 715 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 344 ccgccggcgccgctgctc 327
>gb|AY883557.1| Zea mays subsp. parviglumis cultivar HGW-Wilkes Site 6 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883555.1| Zea mays subsp. parviglumis cultivar TAK-Kato Site 4 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 724 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 353 ccgccggcgccgctgctc 336
>gb|AY883553.1| Zea mays subsp. parviglumis cultivar NCRPIS-PI 566686 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 724 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 353 ccgccggcgccgctgctc 336
>gb|AY883552.1| Zea mays subsp. parviglumis cultivar CIMMYT-11355 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 730 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 359 ccgccggcgccgctgctc 342
>gb|AY883551.1| Zea mays subsp. parviglumis cultivar INIFAP-JSG y LOS 161 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883550.1| Zea mays subsp. parviglumis cultivar INIFAP-JSG 374 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 730 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 359 ccgccggcgccgctgctc 342
>gb|AY883546.1| Zea mays subsp. parviglumis cultivar INIFAP-JSG y LOS 119 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883544.1| Zea mays cultivar CIMMYT-OAX70 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883543.1| Zea mays cultivar INIFAP-GUA14 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883542.1| Zea mays cultivar NRC-SAN329 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 724 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 353 ccgccggcgccgctgctc 336
>gb|AY883541.1| Zea mays cultivar PCIM-APC13 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883540.1| Zea mays cultivar INIFAP-YUC7 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 730 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 359 ccgccggcgccgctgctc 342
>gb|AY883539.1| Zea mays cultivar NCGRP-MAG450 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 724 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 353 ccgccggcgccgctgctc 336
>gb|AY883538.1| Zea mays cultivar CIMMYT-CHH160 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883537.1| Zea mays cultivar CIMMYT-GUA131 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883536.1| Zea mays cultivar NCGRP-CHI349 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 724 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 353 ccgccggcgccgctgctc 336
>gb|AY883535.1| Zea mays cultivar ICA-VEN453 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 724 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 353 ccgccggcgccgctgctc 336
>gb|AY883534.1| Zea mays cultivar INIFAP-PUE32 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883533.1| Zea mays cultivar INIFAP-SIN2 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883532.1| Zea mays cultivar INIFAP-MEX48 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883531.1| Zea mays cultivar CIMMYT-URGII teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883530.1| Zea mays cultivar INIFAP-OAX68 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 727 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 356 ccgccggcgccgctgctc 339
>gb|AY883529.1| Zea mays cultivar NCRPIS-PI213793 teosinte glume architecture 1 (tga1) gene, exon 3 and partial cds Length = 724 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 353 ccgccggcgccgctgctc 336
>gb|AY883563.1|AY883564S4 Zea mays cultivar inbred line W22 teosinte glume architecture 1 (tga1) gene, exon 3 and complete cds Length = 716 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 316 ccgccggcgccgctgctc 299
>gb|AY883560.1| Zea mays cultivar inbred line W22 teosinte glume architecture 1 (tga1) mRNA, complete cds Length = 1469 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 942 ccgccggcgccgctgctc 925
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 agcccccgccggcgccgc 24 |||||||||||||||||| Sbjct: 268500 agcccccgccggcgccgc 268483
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ggagcccccgccggcgcc 22 |||||||||||||||||| Sbjct: 53896 ggagcccccgccggcgcc 53879
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 agcccccgccggcgccgc 24 |||||||||||||||||| Sbjct: 150408 agcccccgccggcgccgc 150391
>emb|AJ001293.1|CPPIPB Craterostigma plantagineum mRNA for major intrinsic protein PIPb Length = 1179 Score = 36.2 bits (18), Expect = 4.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcccggc 38 |||| ||||| |||||||| || ||| ||||||||||| Sbjct: 153 acaaagagccgccgccggctccactgttcgagcccggc 190
>dbj|AK127460.1| Homo sapiens cDNA FLJ45552 fis, clone BRTHA2038279 Length = 4599 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 5 ggagcccccgccggcgccgctg 26 ||||||||||||||| |||||| Sbjct: 1961 ggagcccccgccggccccgctg 1940
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccccgccggcgccgctgc 27 |||||||||||||||||| Sbjct: 40909 ccccgccggcgccgctgc 40892
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ccgccggcgccgctgctc 29 |||||||||||||||||| Sbjct: 3394184 ccgccggcgccgctgctc 3394167
>gb|AF141643.1|AF141643 Vitis berlandieri x Vitis rupestris putative aquaporin PIP1-1 (PIP1-1) mRNA, complete cds Length = 1115 Score = 36.2 bits (18), Expect = 4.0 Identities = 30/34 (88%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcc 34 ||||||| || || |||||||||||| ||||||| Sbjct: 123 acaaggaaccgccaccggcgccgctgttcgagcc 156
>gb|AC008608.7| Homo sapiens chromosome 5 clone CTB-113I20, complete sequence Length = 160672 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 gagcccccgccggcgccg 23 |||||||||||||||||| Sbjct: 143040 gagcccccgccggcgccg 143057
>gb|AF321860.1|AF321860 Lolium rigidum clone Lol-20-f putative cytochrome P450 mRNA, complete cds Length = 1782 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgct 28 |||||||||||||||||| Sbjct: 1162 cccgccggcgccgctgct 1179
>gb|AF321859.1|AF321859 Lolium rigidum clone Lol-20-d putative cytochrome P450 mRNA, complete cds Length = 1906 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgct 28 |||||||||||||||||| Sbjct: 1180 cccgccggcgccgctgct 1197
>gb|S68377.1| Brn-3.2=Brn-3-related POU transcription factor [mice, teratocarcinoma cell line F9, mRNA, 1915 nt] Length = 1915 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 6 gagcccccgccggcgccgctgc 27 |||||||||||| ||||||||| Sbjct: 488 gagcccccgccgccgccgctgc 467
>dbj|AK084240.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230012K19 product:POU domain, class 4, transcription factor 2, full insert sequence Length = 3211 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 6 gagcccccgccggcgccgctgc 27 |||||||||||| ||||||||| Sbjct: 500 gagcccccgccgccgccgctgc 479
>dbj|AK087546.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130318E11 product:POU domain, class 4, transcription factor 2, full insert sequence Length = 3212 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 6 gagcccccgccggcgccgctgc 27 |||||||||||| ||||||||| Sbjct: 505 gagcccccgccgccgccgctgc 484
>dbj|AK083671.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030063C17 product:HOMEOBOX PROTEIN OTX1 homolog [Mus musculus], full insert sequence Length = 2768 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgct 28 |||||||||||||||||| Sbjct: 1193 cccgccggcgccgctgct 1210
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 cccgccggcgccgctgct 28 |||||||||||||||||| Sbjct: 16664742 cccgccggcgccgctgct 16664725 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 12692932 cgccggcgccgctgctcg 12692949
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 28420468 cgccggcgccgctgctcg 28420485 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 10066944 cgccggcgccgctgctcg 10066961
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccccgccggcgccgctgc 27 |||||||||||||||||| Sbjct: 24526333 ccccgccggcgccgctgc 24526316 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgctcgag 32 |||||||||| ||||||||||| Sbjct: 12499867 cccgccggcgtcgctgctcgag 12499888 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 9826045 cgccggcgccgctgctcg 9826062
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 46573 cgccggcgccgctgctcg 46556
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 8 gcccccgccggcgccgctgctc 29 |||||||||| ||||||||||| Sbjct: 55967 gcccccgccgccgccgctgctc 55946
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 gcccccgccggcgccgct 25 |||||||||||||||||| Sbjct: 5302729 gcccccgccggcgccgct 5302746
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 cccgccggcgccgctgct 28 |||||||||||||||||| Sbjct: 13436 cccgccggcgccgctgct 13419
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 cccgccggcgccgctgct 28 |||||||||||||||||| Sbjct: 72881 cccgccggcgccgctgct 72864
>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002J01 Length = 130152 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 39620 cgccggcgccgctgctcg 39637
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 146031 cgccggcgccgctgctcg 146048
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 158870 cgccggcgccgctgctcg 158887
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 709 cgccggcgccgctgctcg 726
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 8 gcccccgccggcgccgctgctc 29 |||||||||| ||||||||||| Sbjct: 102218 gcccccgccgccgccgctgctc 102197
>emb|AJ427977.1|OSA427977 Oryza sativa partial HAK8 gene for putative potasium transporter Length = 4296 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgctcgag 32 |||||||||| ||||||||||| Sbjct: 3761 cccgccggcgtcgctgctcgag 3782
>dbj|AK110565.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-D04, full insert sequence Length = 1862 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cccgccggcgccgctgct 28 |||||||||||||||||| Sbjct: 1102 cccgccggcgccgctgct 1119
>dbj|AK106176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C08, full insert sequence Length = 1352 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 108 cgccggcgccgctgctcg 91
>dbj|AK106917.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-B01, full insert sequence Length = 1199 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 gcccccgccggcgccgctgctc 29 |||||||||| ||||||||||| Sbjct: 104 gcccccgccgccgccgctgctc 125
>dbj|AK102004.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079N13, full insert sequence Length = 1128 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 gcccccgccggcgccgctgctc 29 |||||||||| ||||||||||| Sbjct: 26 gcccccgccgccgccgctgctc 47
>dbj|AK073348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025D08, full insert sequence Length = 1306 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 71 cgccggcgccgctgctcg 54
>gb|AC119268.12| Mus musculus chromosome 5, clone RP24-324M10, complete sequence Length = 201518 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 8 gcccccgccggcgccgctgctc 29 ||||||||||||||||| |||| Sbjct: 67103 gcccccgccggcgccgcggctc 67082
>dbj|AK062268.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-A04, full insert sequence Length = 827 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccccgccggcgccgctgc 27 |||||||||||||||||| Sbjct: 196 ccccgccggcgccgctgc 179
>dbj|AP006269.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0304A10 Length = 21211 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cgccggcgccgctgctcg 30 |||||||||||||||||| Sbjct: 2255 cgccggcgccgctgctcg 2272
>gb|BC028675.1| Homo sapiens chromosome 9 open reading frame 28, transcript variant 2, mRNA (cDNA clone MGC:24472 IMAGE:4083276), complete cds Length = 2701 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 14 gccggcgccgctgctcgagccc 35 ||||||||||| |||||||||| Sbjct: 24 gccggcgccgcagctcgagccc 3
>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence Length = 149454 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 8 gcccccgccggcgccgctgctc 29 ||||||||||||||||| |||| Sbjct: 148649 gcccccgccggcgccgcggctc 148628
>emb|X62841.1|RRPCP2858 R.rattus mRNA for potassium channel protein (2858 bp) Length = 2858 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 7 agcccccgccggcgccgctgct 28 ||||||||||| |||||||||| Sbjct: 676 agcccccgccgccgccgctgct 655
>gb|AY098509.1| Ananas comosus PFE18 protein mRNA, partial cds Length = 1174 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 7 agcccccgccggcgccgctgct 28 ||||||||||| |||||||||| Sbjct: 618 agcccccgccgtcgccgctgct 639
>gb|AC133181.2| Mus musculus BAC clone RP24-169F11 from 8, complete sequence Length = 140384 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 6 gagcccccgccggcgccgctgc 27 |||||||||||| ||||||||| Sbjct: 118829 gagcccccgccgccgccgctgc 118850
>gb|AF004293.1|AF004293 Brassica rapa aquaporin (MOD) mRNA, complete cds Length = 900 Score = 36.2 bits (18), Expect = 4.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 1 acaaggagcccccgccggcgccgctgctcgagcccggc 38 |||||||||| || || |||||| || ||||||||||| Sbjct: 110 acaaggagccgcctcctgcgccgttgttcgagcccggc 147
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 5 ggagcccccgccggcgccgctg 26 |||||||||| ||||||||||| Sbjct: 2124337 ggagcccccggcggcgccgctg 2124358
>gb|AD000010.1|MSGY222 Mycobacterium tuberculosis sequence from clone y222 Length = 41156 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 agcccccgccggcgccgc 24 |||||||||||||||||| Sbjct: 37491 agcccccgccggcgccgc 37474
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 5 ggagcccccgccggcgccgctg 26 ||||||||||||||| |||||| Sbjct: 977622 ggagcccccgccggcaccgctg 977643 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 261,153 Number of Sequences: 3902068 Number of extensions: 261153 Number of successful extensions: 87929 Number of sequences better than 10.0: 147 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82689 Number of HSP's gapped (non-prelim): 5240 length of query: 38 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 18 effective length of database: 17,155,003,908 effective search space: 308790070344 effective search space used: 308790070344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
