ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart52g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF000939.1|AF000939 Hordeum vulgare aleurone ribonuclease mRN... 724 0.0
2ref|NM_193078.2| Oryza sativa (japonica cultivar-group), mRNA 139 7e-30
3ref|XM_506490.1| PREDICTED Oryza sativa (japonica cultivar-group... 139 7e-30
4dbj|AK104512.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
5dbj|AK060320.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
7dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
8ref|XM_482552.1| Oryza sativa (japonica cultivar-group), mRNA 90 6e-15
9ref|XM_507238.1| PREDICTED Oryza sativa (japonica cultivar-group... 90 6e-15
10gb|AY528721.1| Triticum aestivum S-like RNase (WRN3) mRNA, parti... 90 6e-15
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 90 6e-15
12dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic D... 90 6e-15
13dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D... 90 6e-15
14dbj|AK059802.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 6e-15
15dbj|AB052842.1| Oryza sativa mRNA for ribonuclease, complete cds 90 6e-15
16dbj|AB052844.1| Oryza sativa (japonica cultivar-group) mRNA for ... 90 6e-15
17dbj|AB052843.1| Oryza sativa (japonica cultivar-group) mRNA for ... 90 6e-15
18dbj|AK058502.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 1e-12
19gb|AY107950.1| Zea mays PCO076023 mRNA sequence 82 1e-12
20gb|AF000940.1|AF000940 Hordeum vulgare ribonuclease gene, comple... 80 6e-12
21gb|BT019161.1| Zea mays clone Contig826.F mRNA sequence 74 4e-10
22gb|AY517470.1| Triticum aestivum S-like RNase (WRN2) mRNA, compl... 74 4e-10
23gb|AF202030.1|AF202030 Prunus dulcis RNase PD2 (Pd2) mRNA, compl... 58 2e-05
24gb|U19924.1|ZEU19924 Zinnia elegans wounding-induced ribonucleas... 50 0.005
25gb|U19923.1|ZEU19923 Zinnia elegans ribonuclease mRNA, complete cds 48 0.021
26gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 46 0.082
27gb|AC167971.3| Mus musculus BAC clone RP24-439I22 from chromosom... 44 0.32
28gb|AC138657.1| Homo sapiens BAC clone RP11-141I1 from 4, complet... 44 0.32
29gb|AE017221.1| Thermus thermophilus HB27, complete genome 44 0.32
30gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, comple... 44 0.32
31gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome... 42 1.3
32gb|AC102652.9| Mus musculus chromosome 6, clone RP23-20L3, compl... 42 1.3
33gb|BC027353.1| Mus musculus tripartite motif protein 29, mRNA (c... 42 1.3
34gb|BC006699.1| Mus musculus tripartite motif protein 29, mRNA (c... 42 1.3
35gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosom... 42 1.3
36gb|DQ378284.1| Drosophila virilis strain Tucson 15010-1001.10 ch... 42 1.3
37gb|AC074325.7| Homo sapiens chromosome 10 clone RP11-542E6, comp... 42 1.3
38dbj|AK013219.1| Mus musculus 10, 11 days embryo whole body cDNA,... 42 1.3
39dbj|AK028448.1| Mus musculus 0 day neonate skin cDNA, RIKEN full... 42 1.3
40ref|XM_310475.2| Anopheles gambiae str. PEST ENSANGP00000019220 ... 42 1.3
41ref|NM_023655.1| Mus musculus tripartite motif protein 29 (Trim2... 42 1.3
42gb|AY658564.1| Synthetic construct Peudomonas aeruginosa clone F... 40 5.1
43gb|AC121997.3| Mus musculus BAC clone RP24-312G4 from chromosome... 40 5.1
44emb|AL451042.10| Human DNA sequence from clone RP11-276H7 on chr... 40 5.1
45emb|AL445222.9| Human DNA sequence from clone RP11-356B19 on chr... 40 5.1
46gb|AE008830.1| Salmonella typhimurium LT2, section 134 of 220 of... 40 5.1
47emb|BX511059.10| Zebrafish DNA sequence from clone CH211-253P10 ... 40 5.1
48gb|AE014178.1| Mus musculus piebald deletion region section 6 of... 40 5.1
49gb|AY466441.1| Saccharopolyspora spinosa NRLL 18395 obscurin pol... 40 5.1
50gb|AE004769.1| Pseudomonas aeruginosa PAO1, section 330 of 529 o... 40 5.1
51gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 5.1
52emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 5.1
53emb|AL117692.5|CNS01DRP Human chromosome 14 DNA sequence BAC R-5... 40 5.1
54gb|DQ289495.1| Synthetic construct EpoE (epoE) gene, complete cds 40 5.1 
>gb|AF000939.1|AF000939 Hordeum vulgare aleurone ribonuclease mRNA, partial cds
          Length = 739

 Score =  724 bits (365), Expect = 0.0
 Identities = 371/373 (99%)
 Strand = Plus / Plus

                                                                       
Query: 8   acaggccaagatgaagctcgtcgtgctctcggccctgctcctgctttctctcgtcgccgt 67
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  acaggccaagatgaagctcgtcgtgctctcggccctgctcctgctttctctcgtcgccgt 69

                                                                       
Query: 68  ctcctcgggggaggaattcgatttcttctaccttgtgcagcaatggccagggtccttctg 127
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  ctcctcggcggaggaattcgatttcttctaccttgtgcagcaatggccagggtccttctg 129

                                                                       
Query: 128 tgacacgaagaaggggtgctgcttcccggacaccggcaagccggcgacggacttcggcat 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tgacacgaagaaggggtgctgcttcccggacaccggcaagccggcgacggacttcggcat 189

                                                                       
Query: 188 ccacgggctctggcccaactacgccgagtgcaagacccgcggcgagctcgacggcgcctt 247
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 190 ccacgggctctggcccaactacgccgagtgcaagacccgcggcgagctcgacggtgcctt 249

                                                                       
Query: 248 ggagatggtgaccaggcggaggaagaagtgctggccggagtcctgcaacagcgagcgcct 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ggagatggtgaccaggcggaggaagaagtgctggccggagtcctgcaacagcgagcgcct 309

                                                                       
Query: 308 caagctctgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggc 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 caagctctgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggc 369

                        
Query: 368 gtgcaagggcggg 380
           |||||||||||||
Sbjct: 370 gtgcaagggcggg 382
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>ref|NM_193078.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1085

 Score =  139 bits (70), Expect = 7e-30
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                       
Query: 81  gaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaag 140
           |||||||| ||||||||||| || ||||| ||||| || || ||||| |||||| ||   
Sbjct: 120 gaattcgacttcttctacctcgtccagcagtggcctggctcgttctgcgacacgcaggct 179

                                                                       
Query: 141 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 200
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || |||
Sbjct: 180 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 239

                             
Query: 201 cccaactacgccgagtgc 218
           |||||||||||| |||||
Sbjct: 240 cccaactacgccaagtgc 257



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 315 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 374
           ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| ||||||||
Sbjct: 402 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 461

                
Query: 375 ggcgg 379
           |||||
Sbjct: 462 ggcgg 466



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 262 ggcggaggaagaagtgctggccggagtcctgc 293
           ||||| || |||||||||||||||||| ||||
Sbjct: 346 ggcggcggcagaagtgctggccggagtactgc 377
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>ref|XM_506490.1| PREDICTED Oryza sativa (japonica cultivar-group), P0011H09.133 mRNA
          Length = 1097

 Score =  139 bits (70), Expect = 7e-30
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                       
Query: 81  gaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaag 140
           |||||||| ||||||||||| || ||||| ||||| || || ||||| |||||| ||   
Sbjct: 122 gaattcgacttcttctacctcgtccagcagtggcctggctcgttctgcgacacgcaggct 181

                                                                       
Query: 141 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 200
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || |||
Sbjct: 182 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 241

                             
Query: 201 cccaactacgccgagtgc 218
           |||||||||||| |||||
Sbjct: 242 cccaactacgccaagtgc 259



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 315 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 374
           ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| ||||||||
Sbjct: 404 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 463

                
Query: 375 ggcgg 379
           |||||
Sbjct: 464 ggcgg 468



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 262 ggcggaggaagaagtgctggccggagtcctgc 293
           ||||| || |||||||||||||||||| ||||
Sbjct: 348 ggcggcggcagaagtgctggccggagtactgc 379
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>dbj|AK104512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H11, full
           insert sequence
          Length = 1085

 Score =  139 bits (70), Expect = 7e-30
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                       
Query: 81  gaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaag 140
           |||||||| ||||||||||| || ||||| ||||| || || ||||| |||||| ||   
Sbjct: 120 gaattcgacttcttctacctcgtccagcagtggcctggctcgttctgcgacacgcaggct 179

                                                                       
Query: 141 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 200
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || |||
Sbjct: 180 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 239

                             
Query: 201 cccaactacgccgagtgc 218
           |||||||||||| |||||
Sbjct: 240 cccaactacgccaagtgc 257



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 315 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 374
           ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| ||||||||
Sbjct: 402 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 461

                
Query: 375 ggcgg 379
           |||||
Sbjct: 462 ggcgg 466



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 262 ggcggaggaagaagtgctggccggagtcctgc 293
           ||||| || |||||||||||||||||| ||||
Sbjct: 346 ggcggcggcagaagtgctggccggagtactgc 377
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>dbj|AK060320.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F07, full
           insert sequence
          Length = 1097

 Score =  139 bits (70), Expect = 7e-30
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                       
Query: 81  gaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaag 140
           |||||||| ||||||||||| || ||||| ||||| || || ||||| |||||| ||   
Sbjct: 122 gaattcgacttcttctacctcgtccagcagtggcctggctcgttctgcgacacgcaggct 181

                                                                       
Query: 141 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 200
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || |||
Sbjct: 182 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 241

                             
Query: 201 cccaactacgccgagtgc 218
           |||||||||||| |||||
Sbjct: 242 cccaactacgccaagtgc 259



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 315 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 374
           ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| ||||||||
Sbjct: 404 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 463

                
Query: 375 ggcgg 379
           |||||
Sbjct: 464 ggcgg 468



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 262 ggcggaggaagaagtgctggccggagtcctgc 293
           ||||| || |||||||||||||||||| ||||
Sbjct: 348 ggcggcggcagaagtgctggccggagtactgc 379
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  115 bits (58), Expect = 1e-22
 Identities = 73/78 (93%)
 Strand = Plus / Plus

                                                                            
Query: 141      gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 200
                ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || |||
Sbjct: 26088426 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 26088485

                                  
Query: 201      cccaactacgccgagtgc 218
                |||||||||||| |||||
Sbjct: 26088486 cccaactacgccaagtgc 26088503



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                            
Query: 315      tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 374
                ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| ||||||||
Sbjct: 26088648 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 26088707

                     
Query: 375      ggcgg 379
                |||||
Sbjct: 26088708 ggcgg 26088712



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 262      ggcggaggaagaagtgctggccggagtcctgc 293
                ||||| || |||||||||||||||||| ||||
Sbjct: 26088592 ggcggcggcagaagtgctggccggagtactgc 26088623
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>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0011H09
          Length = 147992

 Score =  115 bits (58), Expect = 1e-22
 Identities = 73/78 (93%)
 Strand = Plus / Plus

                                                                          
Query: 141    gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 200
              ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || |||
Sbjct: 121988 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 122047

                                
Query: 201    cccaactacgccgagtgc 218
              |||||||||||| |||||
Sbjct: 122048 cccaactacgccaagtgc 122065



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                          
Query: 315    tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 374
              ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| ||||||||
Sbjct: 122210 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 122269

                   
Query: 375    ggcgg 379
              |||||
Sbjct: 122270 ggcgg 122274



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 262    ggcggaggaagaagtgctggccggagtcctgc 293
              ||||| || |||||||||||||||||| ||||
Sbjct: 122154 ggcggcggcagaagtgctggccggagtactgc 122185
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>ref|XM_482552.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1021

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
           ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | ||||||
Sbjct: 171 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 230

                                                                    
Query: 150 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
           | ||||  | |||||||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 231 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 287
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>ref|XM_507238.1| PREDICTED Oryza sativa (japonica cultivar-group), P0431A03.26 mRNA
          Length = 1178

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
           ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | ||||||
Sbjct: 172 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 231

                                                                    
Query: 150 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
           | ||||  | |||||||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 232 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 288
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>gb|AY528721.1| Triticum aestivum S-like RNase (WRN3) mRNA, partial cds
          Length = 799

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 102/121 (84%)
 Strand = Plus / Plus

                                                                       
Query: 86  cgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtg 145
           ||||||||||||||| |||| ||| ||||| ||||| | ||| ||||||||| || | ||
Sbjct: 86  cgatttcttctacctcgtgctgcagtggccggggtcgtactgcgacacgaagcagagctg 145

                                                                       
Query: 146 ctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaa 205
           ||||| ||||    ||||||| |||||| |||||||||| ||||||||||| ||||||||
Sbjct: 146 ctgctacccgcggtccggcaaaccggcggcggacttcgggatccacgggctgtggcccaa 205

            
Query: 206 c 206
           |
Sbjct: 206 c 206
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                            
Query: 90       ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
                ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | ||||||
Sbjct: 21043637 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 21043696

                                                                         
Query: 150      ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
                | ||||  | |||||||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 21043697 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 21043753
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>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0431A03
          Length = 149500

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                          
Query: 90     ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
              ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | ||||||
Sbjct: 109812 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 109871

                                                                       
Query: 150    ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
              | ||||  | |||||||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 109872 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 109928
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>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0413H11
          Length = 147655

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                         
Query: 90    ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
             ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | ||||||
Sbjct: 14847 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 14906

                                                                      
Query: 150   ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
             | ||||  | |||||||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 14907 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 14963
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>dbj|AK059802.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G01, full
           insert sequence
          Length = 1021

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
           ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | ||||||
Sbjct: 171 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 230

                                                                    
Query: 150 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
           | ||||  | |||||||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 231 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 287
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>dbj|AB052842.1| Oryza sativa mRNA for ribonuclease, complete cds
          Length = 1154

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
           ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | ||||||
Sbjct: 152 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 211

                                                                    
Query: 150 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
           | ||||  | |||||||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 212 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 268
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>dbj|AB052844.1| Oryza sativa (japonica cultivar-group) mRNA for ribonuclease,
           partial cds, clone:E11124
          Length = 739

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
           ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | ||||||
Sbjct: 170 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 229

                                                                    
Query: 150 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
           | ||||  | |||||||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 230 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 286
to top
>dbj|AB052843.1| Oryza sativa (japonica cultivar-group) mRNA for ribonuclease,
           complete cds, clone:C30227
          Length = 1005

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
           ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | ||||||
Sbjct: 144 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 203

                                                                    
Query: 150 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
           | ||||  | |||||||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 204 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 260
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>dbj|AK058502.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F07, full
           insert sequence
          Length = 1178

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 98/117 (83%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
           ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | ||||||
Sbjct: 172 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 231

                                                                    
Query: 150 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
           | ||||  | |||||||||||||| | ||||||||||||||||| ||| ||||||||
Sbjct: 232 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctccggcccaac 288
to top
>gb|AY107950.1| Zea mays PCO076023 mRNA sequence
          Length = 1046

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 98/117 (83%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
           ||||||||||| |||| ||| ||||| ||| ||| ||| ||||| ||| || | ||||||
Sbjct: 284 ttcttctacctcgtgctgcagtggccgggggcctactgcgacaccaagcagagctgctgc 343

                                                                    
Query: 150 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
           | |||  |  |||||||||||||| |||||||||| |||||||| ||||||||||||
Sbjct: 344 taccccaagtccggcaagccggcggcggacttcgggatccacggcctctggcccaac 400



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 347 cgccaactggccgacgctggcgtgc 371
           |||||| ||||||||||||||||||
Sbjct: 487 cgccaagtggccgacgctggcgtgc 511
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>gb|AF000940.1|AF000940 Hordeum vulgare ribonuclease gene, complete cds
          Length = 1583

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 82/96 (85%)
 Strand = Plus / Plus

                                                                       
Query: 111 tggccagggtccttctgtgacacgaagaaggggtgctgcttcccggacaccggcaagccg 170
           ||||| ||||| | ||| |||||||||||| | ||||||| ||||   || || ||||||
Sbjct: 528 tggccggggtcgtactgcgacacgaagaagagctgctgctacccgcggacggggaagccg 587

                                               
Query: 171 gcgacggacttcggcatccacgggctctggcccaac 206
           ||| |||||||||| |||||||||||||||||||||
Sbjct: 588 gcggcggacttcgggatccacgggctctggcccaac 623
to top
>gb|BT019161.1| Zea mays clone Contig826.F mRNA sequence
          Length = 946

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                       
Query: 90  ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
           ||||||||||| |||| ||| ||||| ||| ||| ||| ||||| ||| || | ||||||
Sbjct: 765 ttcttctacctcgtgctgcagtggccgggggcctactgcgacaccaagcagagctgctgc 706

                                                                    
Query: 150 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
           | |||  |  |||||||||||||| |||||||| | |||||||| ||||||||||||
Sbjct: 705 taccccaagtccggcaagccggcggcggacttcaggatccacggcctctggcccaac 649



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 347 cgccaactggccgacgctggcgtgc 371
           |||||| ||||||||||||||||||
Sbjct: 562 cgccaagtggccgacgctggcgtgc 538
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>gb|AY517470.1| Triticum aestivum S-like RNase (WRN2) mRNA, complete cds
          Length = 850

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 97/117 (82%)
 Strand = Plus / Plus

                                                                       
Query: 90  ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 149
           ||||||||||| |||| ||| ||||| ||||| | ||| ||||||||| || | ||||||
Sbjct: 110 ttcttctacctcgtgctgcagtggccggggtcgtactgcgacacgaagcagagctgctgc 169

                                                                    
Query: 150 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 206
           | ||||    | || ||||||||| |||||||||| |||||||| ||||||||||||
Sbjct: 170 tacccgcggtcggggaagccggcggcggacttcgggatccacggcctctggcccaac 226
to top
>gb|AF202030.1|AF202030 Prunus dulcis RNase PD2 (Pd2) mRNA, complete cds
          Length = 790

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 87  gatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaa 139
           |||||||||||| |||| ||||| ||||||||||| | ||||||||| |||||
Sbjct: 79  gatttcttctactttgtccagcagtggccagggtcatactgtgacacaaagaa 131
to top
>gb|U19924.1|ZEU19924 Zinnia elegans wounding-induced ribonuclease mRNA, complete cds
          Length = 802

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 84  ttcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaa 136
           |||||||| ||||||||||| || |||||||| || || | ||||||||||||
Sbjct: 108 ttcgattttttctaccttgttcaacaatggccgggatcatactgtgacacgaa 160
to top
>gb|U19923.1|ZEU19923 Zinnia elegans ribonuclease mRNA, complete cds
          Length = 817

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 84  ttcgatttcttctaccttgtgcagcaatggccagggtccttctgtgac 131
           ||||||||||||||| |||| || || ||||||||||| | |||||||
Sbjct: 106 ttcgatttcttctactttgttcaacagtggccagggtcatactgtgac 153
to top
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 161    cggcaagccggcgacggacttcg 183
              |||||||||||||||||||||||
Sbjct: 379773 cggcaagccggcgacggacttcg 379795
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>gb|AC167971.3| Mus musculus BAC clone RP24-439I22 from chromosome 7, complete sequence
          Length = 198057

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 79     aggaattcgatttcttctaccttgtg 104
              ||||||| ||||||||||||||||||
Sbjct: 184934 aggaattggatttcttctaccttgtg 184959
to top
>gb|AC138657.1| Homo sapiens BAC clone RP11-141I1 from 4, complete sequence
          Length = 119794

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 90     ttcttctaccttgtgcagcaat 111
              ||||||||||||||||||||||
Sbjct: 116907 ttcttctaccttgtgcagcaat 116928
to top
>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 121    ccttctgtgacacgaagaaggg 142
              ||||||||||||||||||||||
Sbjct: 649278 ccttctgtgacacgaagaaggg 649257
to top
>gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, complete sequence
          Length = 207333

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 79    aggaattcgatttcttctaccttgtg 104
             ||||||| ||||||||||||||||||
Sbjct: 49360 aggaattggatttcttctaccttgtg 49385
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>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence
          Length = 182190

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 322    tcagggacctggtgacggagctgga 346
              ||||||||||||||| |||||||||
Sbjct: 117144 tcagggacctggtgagggagctgga 117168
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>gb|AC102652.9| Mus musculus chromosome 6, clone RP23-20L3, complete sequence
          Length = 229752

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 137   gaaggggtgctgcttcccggacacc 161
             ||||||||||||||||| |||||||
Sbjct: 48312 gaaggggtgctgcttcctggacacc 48288
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>gb|BC027353.1| Mus musculus tripartite motif protein 29, mRNA (cDNA clone
           MGC:28195 IMAGE:3988926), complete cds
          Length = 2763

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 322 tcagggacctggtgacggagctgga 346
           ||||||||||||||| |||||||||
Sbjct: 969 tcagggacctggtgagggagctgga 993
to top
>gb|BC006699.1| Mus musculus tripartite motif protein 29, mRNA (cDNA clone
           IMAGE:3498575), partial cds
          Length = 2582

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 322 tcagggacctggtgacggagctgga 346
           ||||||||||||||| |||||||||
Sbjct: 785 tcagggacctggtgagggagctgga 809
to top
>gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosome 9, complete sequence
          Length = 204620

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 322   tcagggacctggtgacggagctgga 346
             ||||||||||||||| |||||||||
Sbjct: 10500 tcagggacctggtgagggagctgga 10524
to top
>gb|DQ378284.1| Drosophila virilis strain Tucson 15010-1001.10 chromosome 4 fosmids
            23A13 and 15G13, complete sequence
          Length = 54154

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 296  cagcgagcgcctcaagctctgggaaatca 324
            |||||||||||| |||| |||||||||||
Sbjct: 5683 cagcgagcgcctaaagccctgggaaatca 5655
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>gb|AC074325.7| Homo sapiens chromosome 10 clone RP11-542E6, complete sequence
          Length = 158587

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 248   ggagatggtgaccaggcggag 268
             |||||||||||||||||||||
Sbjct: 46024 ggagatggtgaccaggcggag 46044
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>dbj|AK013219.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2810431N19
           product:ATAXIA-TELANGIECTASIA GROUP D-ASSOCIATED PROTEIN
           (TRIPARTITE MOTIF PROTEIN TRIM29 ALPHA) homolog [Homo
           sapiens], full insert sequence
          Length = 1870

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 322 tcagggacctggtgacggagctgga 346
           ||||||||||||||| |||||||||
Sbjct: 105 tcagggacctggtgagggagctgga 129
to top
>dbj|AK028448.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched
           library, clone:4631408J18 product:tripartite motif
           protein 29, full insert sequence
          Length = 2063

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 322 tcagggacctggtgacggagctgga 346
           ||||||||||||||| |||||||||
Sbjct: 287 tcagggacctggtgagggagctgga 311
to top
>ref|XM_310475.2| Anopheles gambiae str. PEST ENSANGP00000019220
           (ENSANGG00000016731), mRNA
          Length = 720

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 262 ggcggaggaagaagtgctggc 282
           |||||||||||||||||||||
Sbjct: 458 ggcggaggaagaagtgctggc 478
to top
>ref|NM_023655.1| Mus musculus tripartite motif protein 29 (Trim29), mRNA
          Length = 2063

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 322 tcagggacctggtgacggagctgga 346
           ||||||||||||||| |||||||||
Sbjct: 287 tcagggacctggtgagggagctgga 311
to top
>gb|AY658564.1| Synthetic construct Peudomonas aeruginosa clone FLH035264.01F
           PA3483 gene, partial cds
          Length = 801

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 289 cctgcaacagcgagcgcctc 308
           ||||||||||||||||||||
Sbjct: 203 cctgcaacagcgagcgcctc 222
to top
>gb|AC121997.3| Mus musculus BAC clone RP24-312G4 from chromosome 14, complete sequence
          Length = 143266

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    tttcttctaccttgtgcagc 108
             ||||||||||||||||||||
Sbjct: 12202 tttcttctaccttgtgcagc 12183
to top
>emb|AL451042.10| Human DNA sequence from clone RP11-276H7 on chromosome 1 Contains the
             EPHA2 gene for EphA2, two novel genes and two CpG islands,
             complete sequence
          Length = 88098

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   accaggcggaggaagaagtg 277
             ||||||||||||||||||||
Sbjct: 10846 accaggcggaggaagaagtg 10827
to top
>emb|AL445222.9| Human DNA sequence from clone RP11-356B19 on chromosome 9 Contains the 3'
              end of the gene for a novel protein (DKFZp761J1523), the
              SLC2A8 gene for solute carrier family 2, (facilitated
              glucose transporter) member 8 (glucose transporter
              X1)(GLUT8, GLUTX1), the ZNF79 gene for zinc finger protein
              79 (pT7), the RPL12 gene for ribosomal protein L12 (60S
              ribosomal protein L12), the gene for a novel protein, the
              gene for a novel protein (DKFZP434H0820)(FLJ13518,
              FLJ22151, FLJ22298) and four Cpg islands, complete sequence
          Length = 225370

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 304    gcctcaagctctgggaaatcaggg 327
              |||||||||||||||||| |||||
Sbjct: 110619 gcctcaagctctgggaaagcaggg 110642
to top
>gb|AE008830.1| Salmonella typhimurium LT2, section 134 of 220 of the complete genome
          Length = 20890

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  acgccaactggccgacgctg 365
            ||||||||||||||||||||
Sbjct: 4069 acgccaactggccgacgctg 4050
to top
>emb|BX511059.10| Zebrafish DNA sequence from clone CH211-253P10 in linkage group 14,
             complete sequence
          Length = 107605

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 88    atttcttctaccttgtgcagcaat 111
             ||||||||||||||||| ||||||
Sbjct: 92572 atttcttctaccttgtggagcaat 92595
to top
>gb|AE014178.1| Mus musculus piebald deletion region section 6 of 11 of the complete
              sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     tttcttctaccttgtgcagc 108
              ||||||||||||||||||||
Sbjct: 169861 tttcttctaccttgtgcagc 169842
to top
>gb|AY466441.1| Saccharopolyspora spinosa NRLL 18395 obscurin polyketide synthase gene
             locus, complete sequence
          Length = 108584

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 224   ccgcggcgagctcgacggcgcctt 247
             |||||||||| |||||||||||||
Sbjct: 85899 ccgcggcgaggtcgacggcgcctt 85876
to top
>gb|AE004769.1| Pseudomonas aeruginosa PAO1, section 330 of 529 of the complete
            genome
          Length = 13017

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  cctgcaacagcgagcgcctc 308
            ||||||||||||||||||||
Sbjct: 4404 cctgcaacagcgagcgcctc 4423
to top
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 346     acgccaactggccgacgctg 365
               ||||||||||||||||||||
Sbjct: 2809518 acgccaactggccgacgctg 2809499
to top
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 350     caactggccgacgctggcgt 369
               ||||||||||||||||||||
Sbjct: 1563965 caactggccgacgctggcgt 1563984
to top
>emb|AL117692.5|CNS01DRP Human chromosome 14 DNA sequence BAC R-58E21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168874

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   aggcggaggaagaagtgctg 280
             ||||||||||||||||||||
Sbjct: 95923 aggcggaggaagaagtgctg 95904
to top
>gb|DQ289495.1| Synthetic construct EpoE (epoE) gene, complete cds
          Length = 11460

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 160   ccggcaagccggcgacggacttcggcat 187
             |||||||||||||||| |||| ||||||
Sbjct: 10142 ccggcaagccggcgaccgactgcggcat 10169


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,761,780
Number of Sequences: 3902068
Number of extensions: 2761780
Number of successful extensions: 59751
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59479
Number of HSP's gapped (non-prelim): 270
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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