>LRC40_CHICK (Q5ZLN0) Leucine-rich repeat-containing protein 40|
          Length = 603

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
 Frame = +1

Query: 97  PEELRAARSRGKSDQWWNSTSCTMASLLWSQ-------IKLNRAYVRRQVHENRLTRLPR 255
           PEE     S G +D+WW  T  T   L  +Q       ++L  A     VH+N+LT LP 
Sbjct: 63  PEEAHQNLSFGAADRWWEQTDLTKLILASNQLRCLSEDVRLLPALTVLDVHDNQLTSLPS 122

Query: 256 SL 261
           +L
Sbjct: 123 AL 124

>LRC40_BRARE (Q7SXW3) Leucine-rich repeat-containing protein 40|
          Length = 601

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
 Frame = +1

Query: 97  PEELRAARSRGKSDQWWNSTSCTMASL-------LWSQIKLNRAYVRRQVHENRLTRLPR 255
           P+E +   S G  D+WW  T  T   L       +   +KL  A V   +H+N+L+ LP 
Sbjct: 61  PQEAKQNVSFGAEDRWWEQTDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPD 120

Query: 256 SL 261
           S+
Sbjct: 121 SI 122

>LRC40_PONPY (Q5RFE9) Leucine-rich repeat-containing protein 40|
          Length = 602

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
 Frame = +1

Query: 97  PEELRAARSRGKSDQWWNSTSCTMASL-------LWSQIKLNRAYVRRQVHENRLTRLPR 255
           PEE     S G +++WW  T  T   +       L   ++L  A     +H+N+LT LP 
Sbjct: 63  PEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPS 122

Query: 256 SLHWSPLQSGHFKNIALRCTKNLPWE 333
           ++    LQ+    N++    K LP E
Sbjct: 123 AIR--ELQNLQKLNVSHNKLKILPEE 146

>LRC40_HUMAN (Q9H9A6) Leucine-rich repeat-containing protein 40|
          Length = 602

 Score = 34.7 bits (78), Expect = 0.058
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
 Frame = +1

Query: 97  PEELRAARSRGKSDQWWNSTSCTMASL-------LWSQIKLNRAYVRRQVHENRLTRLPR 255
           PEE     S G +++WW  T  T   +       L   ++L  A     +H+N+LT LP 
Sbjct: 63  PEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPS 122

Query: 256 SLHWSPLQSGHFKNIALRCTKNLPWE 333
           ++    L++    N++    K LP E
Sbjct: 123 AIR--ELENLQKLNVSHNKLKILPEE 146

>LRC40_MACFA (Q4R3P6) Leucine-rich repeat-containing protein 40|
          Length = 602

 Score = 33.9 bits (76), Expect = 0.098
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
 Frame = +1

Query: 97  PEELRAARSRGKSDQWWNSTSCTMASL-------LWSQIKLNRAYVRRQVHENRLTRLPR 255
           PEE     S G +++WW  T  T   +       L   ++L  A     +H+N+LT LP 
Sbjct: 63  PEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPS 122

Query: 256 SL 261
           ++
Sbjct: 123 AM 124

>LRC40_MOUSE (Q9CRC8) Leucine-rich repeat-containing protein 40|
          Length = 602

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
 Frame = +1

Query: 97  PEELRAARSRGKSDQWWNSTSCTMASL-------LWSQIKLNRAYVRRQVHENRLTRLPR 255
           PEE     S   +++WW+ T  T   +       L   ++L  A     +H+N+LT LP 
Sbjct: 63  PEEANQNLSFSSTERWWDQTDLTKLIISSNKLQSLSDDLRLLPALTVLDIHDNQLTSLPS 122

Query: 256 SL 261
           ++
Sbjct: 123 AI 124

>SIG12_PANTR (Q95LH0) Sialic acid-binding Ig-like lectin 12 precursor|
           (Siglec-12) (Sialic acid-binding Ig-like lectin-like 1)
           (Siglec-L1)
          Length = 597

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +1

Query: 193 KLNRAYVRRQVHENRLTRLPRSLHWSPLQSGHFKNIALRCTKNLPW 330
           K N  Y +  VH   LT LP       L+SGH +N+    T ++PW
Sbjct: 258 KWNYIYDKLSVHVTALTHLPTFSIPGTLESGHPRNL----TCSVPW 299

>TEC_MOUSE (P24604) Tyrosine-protein kinase Tec (EC 2.7.10.2)|
          Length = 630

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
 Frame = +1

Query: 94  PPEELRAARSRGKSDQWWNSTSCTMASLLWSQIKLNRAYVRRQVHENRLTRLPRS--LHW 267
           PPE    +R   KSD W      +   L+W      R    +  +   +T + R   LH 
Sbjct: 532 PPEVFNYSRFSSKSDVW------SFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLHR 585

Query: 268 SPLQSGHFKNIALRCTKNLP 327
             L + +   + LRC +  P
Sbjct: 586 PKLATKYLYEVMLRCWQERP 605

>SIG12_HUMAN (Q96PQ1) Sialic acid-binding Ig-like lectin 12 precursor|
           (Siglec-12) (Sialic acid-binding Ig-like lectin-like 1)
           (Siglec-L1)
          Length = 595

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +1

Query: 193 KLNRAYVRRQVHENRLTRLPRSLHWSPLQSGHFKNIALRCTKNLPW 330
           K N  Y +  VH   LT +P       L+SGH +N+    T ++PW
Sbjct: 256 KWNYIYDKLSVHVTALTHMPTFSIPGTLESGHPRNL----TCSVPW 297

>TEC_HUMAN (P42680) Tyrosine-protein kinase Tec (EC 2.7.10.2)|
          Length = 631

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
 Frame = +1

Query: 94  PPEELRAARSRGKSDQWWNSTSCTMASLLWSQIKLNRAYVRRQVHENRLTRLPRS--LHW 267
           PPE    +R   KSD W      +   L+W      R    +  +   +T + R   L+ 
Sbjct: 533 PPEVFNYSRFSSKSDVW------SFGVLMWEVFTEGRMPFEKYTNYEVVTMVTRGHRLYQ 586

Query: 268 SPLQSGHFKNIALRCTKNLP 327
             L S +   + LRC +  P
Sbjct: 587 PKLASNYVYEVMLRCWQEKP 606

>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3530

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 71  RTARRLPHPPRSSGRREAGGNPISGGIRRPVPWL-LCFGHR 190
           R+ +  P P R++GR    G+P+ G  R P P L LC   R
Sbjct: 818 RSLQESPAPRRAAGRLGPPGSPLPGSPRPPSPPLGLCHSPR 858

>VIT1_PERAM (Q9U8M0) Vitellogenin 1 precursor (Vg-1)|
          Length = 1896

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 14/89 (15%)
 Frame = +1

Query: 151  STSCTMASLLWSQIKLN---RAYVRRQVHENRLTRLPRS---LHWSPL------QSGHFK 294
            S    + S+ W+ I+LN   R+ V     +  L RL R    L++ P       Q+  F 
Sbjct: 1466 SVDTALMSITWTNIRLNRWTRSLVEPSPQDTALDRLAREALPLYYEPTCVLDVSQAATFD 1525

Query: 295  NIALRCTKNLPWEASLPY--ASAEDDASI 375
            N     T +  W   L Y    ++DD ++
Sbjct: 1526 NTTYPLTLSSAWHMMLQYQPKRSQDDENL 1554

>MAD18_ORYSA (Q6Z4G0) MADS-box transcription factor 18 (OsMADS18) (MADS-box|
           protein 2) (OsMADS2) (MADS-box protein 28) (OsMADS28)
           (FDRMADS7)
          Length = 249

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 98  PRSSGRREAGGNPISGGIRRPVPWLLCFGH 187
           PR SG  EA  +P   G  +  PW+L   H
Sbjct: 219 PRGSGESEAQPSPAQAGNSKLPPWMLRTSH 248

>DEGP2_ARATH (O82261) Protease Do-like 2, chloroplast precursor (EC 3.4.21.-)|
          Length = 607

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 254 GRFIGAPCSQAILKTLHCDALRICLGRPLFRMLLQRTMPALS 379
           G++ G PC   +L+ L   ALR CL  P    +L R +   S
Sbjct: 315 GKYTGYPCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTS 356


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.127    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,837,615
Number of Sequences: 219361
Number of extensions: 1096944
Number of successful extensions: 3039
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3038
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)