Clone Name | bart52g01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK122182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149M05, full insert sequence Length = 1531 Score = 331 bits (167), Expect = 9e-88 Identities = 236/259 (91%) Strand = Plus / Plus Query: 116 gatgatgatgacacgggcctccatgggggccatggagggcgcggcggtggacgaggtggt 175 |||||||||||| ||||| || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 125 gatgatgatgacgcgggcgtcgatgggggcgatggaaggcgcggcggtggacgaggtggt 184 Query: 176 gcggcggctggtcgagggcggccgcggcggtcggcaggtgcagctgtccgaggcggagat 235 |||||| || || |||||||| ||||| || |||||||||||||||| ||||||||||| Sbjct: 185 gcggcgcctcgtggagggcgggcgcggggggaggcaggtgcagctgtcggaggcggagat 244 Query: 236 ccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagcccaacctcctccgcat 295 |||||||||||||||||| || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 245 ccggcagctctgcgtcgaggcgaagcgggtgctcctgtcgcagccgaacctcctgcgcat 304 Query: 296 ccaggcccccgtcaagatctgcggtgatatccatggtcagtttgttgatcttctgaggtt 355 ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| | Sbjct: 305 ccacgcccccgtcaagatctgcggtgatatccatgggcaatttgttgatcttctgaggct 364 Query: 356 gtttgatttgggtggttat 374 |||||||||||| |||||| Sbjct: 365 gtttgatttgggcggttat 383
>dbj|AK105047.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E11, full insert sequence Length = 1489 Score = 331 bits (167), Expect = 9e-88 Identities = 236/259 (91%) Strand = Plus / Plus Query: 116 gatgatgatgacacgggcctccatgggggccatggagggcgcggcggtggacgaggtggt 175 |||||||||||| ||||| || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 109 gatgatgatgacgcgggcgtcgatgggggcgatggaaggcgcggcggtggacgaggtggt 168 Query: 176 gcggcggctggtcgagggcggccgcggcggtcggcaggtgcagctgtccgaggcggagat 235 |||||| || || |||||||| ||||| || |||||||||||||||| ||||||||||| Sbjct: 169 gcggcgcctcgtggagggcgggcgcggggggaggcaggtgcagctgtcggaggcggagat 228 Query: 236 ccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagcccaacctcctccgcat 295 |||||||||||||||||| || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 229 ccggcagctctgcgtcgaggcgaagcgggtgctcctgtcgcagccgaacctcctgcgcat 288 Query: 296 ccaggcccccgtcaagatctgcggtgatatccatggtcagtttgttgatcttctgaggtt 355 ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| | Sbjct: 289 ccacgcccccgtcaagatctgcggtgatatccatgggcaatttgttgatcttctgaggct 348 Query: 356 gtttgatttgggtggttat 374 |||||||||||| |||||| Sbjct: 349 gtttgatttgggcggttat 367
>dbj|AK100195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037D01, full insert sequence Length = 1514 Score = 331 bits (167), Expect = 9e-88 Identities = 236/259 (91%) Strand = Plus / Plus Query: 116 gatgatgatgacacgggcctccatgggggccatggagggcgcggcggtggacgaggtggt 175 |||||||||||| ||||| || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 125 gatgatgatgacgcgggcgtcgatgggggcgatggaaggcgcggcggtggacgaggtggt 184 Query: 176 gcggcggctggtcgagggcggccgcggcggtcggcaggtgcagctgtccgaggcggagat 235 |||||| || || |||||||| ||||| || |||||||||||||||| ||||||||||| Sbjct: 185 gcggcgcctcgtggagggcgggcgcggggggaggcaggtgcagctgtcggaggcggagat 244 Query: 236 ccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagcccaacctcctccgcat 295 |||||||||||||||||| || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 245 ccggcagctctgcgtcgaggcgaagcgggtgctcctgtcgcagccgaacctcctgcgcat 304 Query: 296 ccaggcccccgtcaagatctgcggtgatatccatggtcagtttgttgatcttctgaggtt 355 ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| | Sbjct: 305 ccacgcccccgtcaagatctgcggtgatatccatgggcaatttgttgatcttctgaggct 364 Query: 356 gtttgatttgggtggttat 374 |||||||||||| |||||| Sbjct: 365 gtttgatttgggcggttat 383
>dbj|AK064941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P08, full insert sequence Length = 1514 Score = 331 bits (167), Expect = 9e-88 Identities = 236/259 (91%) Strand = Plus / Plus Query: 116 gatgatgatgacacgggcctccatgggggccatggagggcgcggcggtggacgaggtggt 175 |||||||||||| ||||| || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 125 gatgatgatgacgcgggcgtcgatgggggcgatggaaggcgcggcggtggacgaggtggt 184 Query: 176 gcggcggctggtcgagggcggccgcggcggtcggcaggtgcagctgtccgaggcggagat 235 |||||| || || |||||||| ||||| || |||||||||||||||| ||||||||||| Sbjct: 185 gcggcgcctcgtggagggcgggcgcggggggaggcaggtgcagctgtcggaggcggagat 244 Query: 236 ccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagcccaacctcctccgcat 295 |||||||||||||||||| || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 245 ccggcagctctgcgtcgaggcgaagcgggtgctcctgtcgcagccgaacctcctgcgcat 304 Query: 296 ccaggcccccgtcaagatctgcggtgatatccatggtcagtttgttgatcttctgaggtt 355 ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| | Sbjct: 305 ccacgcccccgtcaagatctgcggtgatatccatgggcaatttgttgatcttctgaggct 364 Query: 356 gtttgatttgggtggttat 374 |||||||||||| |||||| Sbjct: 365 gtttgatttgggcggttat 383
>ref|NM_184017.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 957 Score = 311 bits (157), Expect = 9e-82 Identities = 217/237 (91%) Strand = Plus / Plus Query: 138 atgggggccatggagggcgcggcggtggacgaggtggtgcggcggctggtcgagggcggc 197 |||||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| Sbjct: 1 atgggggcgatggaaggcgcggcggtggacgaggtggtgcggcgcctcgtggagggcggg 60 Query: 198 cgcggcggtcggcaggtgcagctgtccgaggcggagatccggcagctctgcgtcgacgcc 257 ||||| || |||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 61 cgcggggggaggcaggtgcagctgtcggaggcggagatccggcagctctgcgtcgaggcg 120 Query: 258 aagcgggtgctcctgtcccagcccaacctcctccgcatccaggcccccgtcaagatctgc 317 ||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 121 aagcgggtgctcctgtcgcagccgaacctcctgcgcatccacgcccccgtcaagatctgc 180 Query: 318 ggtgatatccatggtcagtttgttgatcttctgaggttgtttgatttgggtggttat 374 |||||||||||||| || |||||||||||||||||| ||||||||||||| |||||| Sbjct: 181 ggtgatatccatgggcaatttgttgatcttctgaggctgtttgatttgggcggttat 237
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 260 bits (131), Expect = 3e-66 Identities = 188/207 (90%) Strand = Plus / Minus Query: 116 gatgatgatgacacgggcctccatgggggccatggagggcgcggcggtggacgaggtggt 175 |||||||||||| ||||| || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 13910209 gatgatgatgacgcgggcgtcgatgggggcgatggaaggcgcggcggtggacgaggtggt 13910150 Query: 176 gcggcggctggtcgagggcggccgcggcggtcggcaggtgcagctgtccgaggcggagat 235 |||||| || || |||||||| ||||| || |||||||||||||||| ||||||||||| Sbjct: 13910149 gcggcgcctcgtggagggcgggcgcggggggaggcaggtgcagctgtcggaggcggagat 13910090 Query: 236 ccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagcccaacctcctccgcat 295 |||||||||||||||||| || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 13910089 ccggcagctctgcgtcgaggcgaagcgggtgctcctgtcgcagccgaacctcctgcgcat 13910030 Query: 296 ccaggcccccgtcaagatctgcggtga 322 ||| ||||||||||||||||||||||| Sbjct: 13910029 ccacgcccccgtcaagatctgcggtga 13910003 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 318 ggtgatatccatggtcagtttgttgatcttctgaggttgtttgatttgggtggttat 374 |||||||||||||| || |||||||||||||||||| ||||||||||||| |||||| Sbjct: 13907520 ggtgatatccatgggcaatttgttgatcttctgaggctgtttgatttgggcggttat 13907464
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 260 bits (131), Expect = 3e-66 Identities = 188/207 (90%) Strand = Plus / Minus Query: 116 gatgatgatgacacgggcctccatgggggccatggagggcgcggcggtggacgaggtggt 175 |||||||||||| ||||| || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 70511 gatgatgatgacgcgggcgtcgatgggggcgatggaaggcgcggcggtggacgaggtggt 70452 Query: 176 gcggcggctggtcgagggcggccgcggcggtcggcaggtgcagctgtccgaggcggagat 235 |||||| || || |||||||| ||||| || |||||||||||||||| ||||||||||| Sbjct: 70451 gcggcgcctcgtggagggcgggcgcggggggaggcaggtgcagctgtcggaggcggagat 70392 Query: 236 ccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagcccaacctcctccgcat 295 |||||||||||||||||| || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 70391 ccggcagctctgcgtcgaggcgaagcgggtgctcctgtcgcagccgaacctcctgcgcat 70332 Query: 296 ccaggcccccgtcaagatctgcggtga 322 ||| ||||||||||||||||||||||| Sbjct: 70331 ccacgcccccgtcaagatctgcggtga 70305 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 318 ggtgatatccatggtcagtttgttgatcttctgaggttgtttgatttgggtggttat 374 |||||||||||||| || |||||||||||||||||| ||||||||||||| |||||| Sbjct: 67822 ggtgatatccatgggcaatttgttgatcttctgaggctgtttgatttgggcggttat 67766
>gb|AY110065.1| Zea mays CL384_1 mRNA sequence Length = 1522 Score = 206 bits (104), Expect = 4e-50 Identities = 146/160 (91%) Strand = Plus / Plus Query: 215 gcagctgtccgaggcggagatccggcagctctgcgtcgacgccaagcgggtgctcctgtc 274 |||||||||||||||||||||||||||||||||||| || | ||||||||||||||| || Sbjct: 145 gcagctgtccgaggcggagatccggcagctctgcgtagagggcaagcgggtgctcctctc 204 Query: 275 ccagcccaacctcctccgcatccaggcccccgtcaagatctgcggtgatatccatggtca 334 ||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||| || Sbjct: 205 ccagcccaatctcctccgaatccacgccccagtcaagatctgcggtgatatccatggcca 264 Query: 335 gtttgttgatcttctgaggttgtttgatttgggtggttat 374 |||||| || |||||||| || || ||||||||||||||| Sbjct: 265 gtttgtcgaccttctgagattattcgatttgggtggttat 304 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 119 gatgatgacacgggcctccatgggggccatggagggcgcggcggtggacgaggtggtgcg 178 ||||||||| ||||| | |||||| | |||||||||||||||||||||||| ||||||| Sbjct: 49 gatgatgacgcgggcaccgatggggccgatggagggcgcggcggtggacgagatggtgcg 108
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 109 bits (55), Expect = 6e-21 Identities = 97/112 (86%), Gaps = 8/112 (7%) Strand = Plus / Minus Query: 219 ctgtccgaggcggagatccggcagctctgcgtcgacgccaagcgggtgctcctgtcccag 278 |||||||||||||||||||||||||||| |||||| | ||||||||||||||| || ||| Sbjct: 2515720 ctgtccgaggcggagatccggcagctctacgtcgaggtcaagcgggtgctcctatcgcag 2515661 Query: 279 cc--------caacctcctccgcatccaggcccccgtcaagatctgcggtga 322 || ||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 2515660 cccaagtgcacaacctcctgcgcatccacgcccccgtcaagatctgcggtga 2515609 Score = 63.9 bits (32), Expect = 3e-07 Identities = 77/91 (84%), Gaps = 7/91 (7%) Strand = Plus / Plus Query: 234 atccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagcccaacctcctccgc 293 ||||| ||||||| |||||| | |||||||||| |||||||||| ||||||| ||| Sbjct: 16135073 atccgacagctctacgtcgaggtcaagcgggtgttcctgtccca-----acctcctgcgc 16135127 Query: 294 atccaggcccccgtc--aagatctgcggtga 322 ||||| ||||||||| |||||||||||||| Sbjct: 16135128 atccacgcccccgtcaaaagatctgcggtga 16135158
>dbj|AP005649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0064G16 Length = 166453 Score = 109 bits (55), Expect = 6e-21 Identities = 97/112 (86%), Gaps = 8/112 (7%) Strand = Plus / Minus Query: 219 ctgtccgaggcggagatccggcagctctgcgtcgacgccaagcgggtgctcctgtcccag 278 |||||||||||||||||||||||||||| |||||| | ||||||||||||||| || ||| Sbjct: 131641 ctgtccgaggcggagatccggcagctctacgtcgaggtcaagcgggtgctcctatcgcag 131582 Query: 279 cc--------caacctcctccgcatccaggcccccgtcaagatctgcggtga 322 || ||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 131581 cccaagtgcacaacctcctgcgcatccacgcccccgtcaagatctgcggtga 131530
>ref|XM_464140.1| Oryza sativa (japonica cultivar-group), mRNA Length = 207 Score = 101 bits (51), Expect = 2e-18 Identities = 93/108 (86%), Gaps = 8/108 (7%) Strand = Plus / Plus Query: 219 ctgtccgaggcggagatccggcagctctgcgtcgacgccaagcgggtgctcctgtcccag 278 |||||||||||||||||||||||||||| |||||| | ||||||||||||||| || ||| Sbjct: 91 ctgtccgaggcggagatccggcagctctacgtcgaggtcaagcgggtgctcctatcgcag 150 Query: 279 cc--------caacctcctccgcatccaggcccccgtcaagatctgcg 318 || ||||||||| |||||||| ||||||||||||||||||| Sbjct: 151 cccaagtgcacaacctcctgcgcatccacgcccccgtcaagatctgcg 198
>dbj|AK102278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089E02, full insert sequence Length = 1559 Score = 69.9 bits (35), Expect = 6e-09 Identities = 104/127 (81%) Strand = Plus / Plus Query: 223 ccgaggcggagatccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagccca 282 |||| ||||||||||| ||||||||| || ||||||| || |||| |||||||||| Sbjct: 237 ccgacgcggagatccgcaagctctgcgccgccgccaaggacgtcttcctctcccagccca 296 Query: 283 acctcctccgcatccaggcccccgtcaagatctgcggtgatatccatggtcagtttgttg 342 |||||||| || |||||||| |||| |||||||| ||||||||||| |||| | || Sbjct: 297 acctcctcgagctcgaggcccccatcaaaatctgcggagatatccatggccagtattctg 356 Query: 343 atcttct 349 ||||||| Sbjct: 357 atcttct 363
>dbj|AK064345.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H10, full insert sequence Length = 1631 Score = 69.9 bits (35), Expect = 6e-09 Identities = 104/127 (81%) Strand = Plus / Plus Query: 223 ccgaggcggagatccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagccca 282 |||| ||||||||||| ||||||||| || ||||||| || |||| |||||||||| Sbjct: 237 ccgacgcggagatccgcaagctctgcgccgccgccaaggacgtcttcctctcccagccca 296 Query: 283 acctcctccgcatccaggcccccgtcaagatctgcggtgatatccatggtcagtttgttg 342 |||||||| || |||||||| |||| |||||||| ||||||||||| |||| | || Sbjct: 297 acctcctcgagctcgaggcccccatcaaaatctgcggagatatccatggccagtattctg 356 Query: 343 atcttct 349 ||||||| Sbjct: 357 atcttct 363
>dbj|AP005065.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0046H03 Length = 137020 Score = 63.9 bits (32), Expect = 3e-07 Identities = 77/91 (84%), Gaps = 7/91 (7%) Strand = Plus / Plus Query: 234 atccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagcccaacctcctccgc 293 ||||| ||||||| |||||| | |||||||||| |||||||||| ||||||| ||| Sbjct: 27402 atccgacagctctacgtcgaggtcaagcgggtgttcctgtccca-----acctcctgcgc 27456 Query: 294 atccaggcccccgtc--aagatctgcggtga 322 ||||| ||||||||| |||||||||||||| Sbjct: 27457 atccacgcccccgtcaaaagatctgcggtga 27487
>dbj|AP004787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0403C01 Length = 145635 Score = 63.9 bits (32), Expect = 3e-07 Identities = 77/91 (84%), Gaps = 7/91 (7%) Strand = Plus / Plus Query: 234 atccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagcccaacctcctccgc 293 ||||| ||||||| |||||| | |||||||||| |||||||||| ||||||| ||| Sbjct: 133307 atccgacagctctacgtcgaggtcaagcgggtgttcctgtccca-----acctcctgcgc 133361 Query: 294 atccaggcccccgtc--aagatctgcggtga 322 ||||| ||||||||| |||||||||||||| Sbjct: 133362 atccacgcccccgtcaaaagatctgcggtga 133392
>gb|BT017875.1| Zea mays clone EL01N0513C06.c mRNA sequence Length = 1350 Score = 60.0 bits (30), Expect = 5e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 231 gagatccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagcccaacctcctc 290 |||||||||| ||||||| || ||||||| ||| |||| ||||||||||||||||| Sbjct: 270 gagatccggcgcctctgcgccgccgccaaggatgtgttcctctcccagcccaacctcctg 329 Query: 291 cgcatccaggcccccgtcaagatctgcggtgatatccatggtcagt 336 || |||||||| ||||||| ||||| ||| |||||||||||| Sbjct: 330 gagctcgaggcccccatcaagatatgcggggatgtccatggtcagt 375
>gb|AY109281.1| Zea mays PCO126319 mRNA sequence Length = 699 Score = 60.0 bits (30), Expect = 5e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 231 gagatccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagcccaacctcctc 290 |||||||||| ||||||| || ||||||| ||| |||| ||||||||||||||||| Sbjct: 334 gagatccggcgcctctgcgccgccgccaaggatgtgttcctctcccagcccaacctcctg 393 Query: 291 cgcatccaggcccccgtcaagatctgcggtgatatccatggtcagt 336 || |||||||| ||||||| ||||| ||| |||||||||||| Sbjct: 394 gagctcgaggcccccatcaagatatgcggggatgtccatggtcagt 439
>ref|XM_482750.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1325 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 211 aggtgcagctgtccgaggcggagatccggcagctctgcgtc 251 |||||||||| |||||||||||||||||||||||||||| Sbjct: 200 aggtgcagctcagcgaggcggagatccggcagctctgcgtc 240
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 2e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 211 aggtgcagctgtccgaggcggagatccggcagctctgcgtcgacgccaagcgggtgctcc 270 |||||||||| |||||||||||||||||||||||||||| || |||| | ||| Sbjct: 22327564 aggtgcagctcagcgaggcggagatccggcagctctgcgtcaccggcaaggacatcttcc 22327623 Query: 271 tgtcccagcccaacctcctccgcatccaggcccccgtcaagatctgcggtgat 323 | |||||||||||||||||| || |||||||| |||| ||||||||||| Sbjct: 22327624 tctcccagcccaacctcctcgagctcgaggcccccatcaacgtctgcggtgat 22327676 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 ggcggtggacgaggtggtgcggcg 181 ||||||||||||||||| |||||| Sbjct: 26346108 ggcggtggacgaggtggggcggcg 26346131
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1144B06 Length = 133689 Score = 58.0 bits (29), Expect = 2e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 211 aggtgcagctgtccgaggcggagatccggcagctctgcgtcgacgccaagcgggtgctcc 270 |||||||||| |||||||||||||||||||||||||||| || |||| | ||| Sbjct: 24547 aggtgcagctcagcgaggcggagatccggcagctctgcgtcaccggcaaggacatcttcc 24606 Query: 271 tgtcccagcccaacctcctccgcatccaggcccccgtcaagatctgcggtgat 323 | |||||||||||||||||| || |||||||| |||| ||||||||||| Sbjct: 24607 tctcccagcccaacctcctcgagctcgaggcccccatcaacgtctgcggtgat 24659
>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048G02 Length = 155542 Score = 58.0 bits (29), Expect = 2e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 211 aggtgcagctgtccgaggcggagatccggcagctctgcgtcgacgccaagcgggtgctcc 270 |||||||||| |||||||||||||||||||||||||||| || |||| | ||| Sbjct: 143940 aggtgcagctcagcgaggcggagatccggcagctctgcgtcaccggcaaggacatcttcc 143999 Query: 271 tgtcccagcccaacctcctccgcatccaggcccccgtcaagatctgcggtgat 323 | |||||||||||||||||| || |||||||| |||| ||||||||||| Sbjct: 144000 tctcccagcccaacctcctcgagctcgaggcccccatcaacgtctgcggtgat 144052
>dbj|AK121378.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127F14, full insert sequence Length = 1325 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 211 aggtgcagctgtccgaggcggagatccggcagctctgcgtc 251 |||||||||| |||||||||||||||||||||||||||| Sbjct: 200 aggtgcagctcagcgaggcggagatccggcagctctgcgtc 240
>ref|NM_187476.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1122 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 209 gcaggtgcagctgtccgaggcggagatccggcagctctgc 248 |||||||||||| |||||| |||||||||| ||||||||| Sbjct: 111 gcaggtgcagctctccgagtcggagatccgccagctctgc 150
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 209 gcaggtgcagctgtccgaggcggagatccggcagctctgc 248 |||||||||||| |||||| |||||||||| ||||||||| Sbjct: 8856713 gcaggtgcagctctccgagtcggagatccgccagctctgc 8856752 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 ccgaggcggagatccggcagctct 246 ||||||||||||||||| |||||| Sbjct: 1302621 ccgaggcggagatccgggagctct 1302644
>emb|AJ000241.1|HVJ000241 Hordeum vulgare mRNA for expressed sequence tag Length = 395 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 277 agcccaacctcctccgcatccaggcccccgtcaagatctgcggtgatatccatggtcagt 336 |||||||||||||| || |||| ||| ||||||||||||||||||| |||||||||| Sbjct: 1 agcccaacctcctcgagctcgaggcgcccatcaagatctgcggtgatattcatggtcagt 60
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02, complete sequence Length = 126027 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 209 gcaggtgcagctgtccgaggcggagatccggcagctctgc 248 |||||||||||| |||||| |||||||||| ||||||||| Sbjct: 47601 gcaggtgcagctctccgagtcggagatccgccagctctgc 47640
>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02, complete sequence Length = 112265 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 209 gcaggtgcagctgtccgaggcggagatccggcagctctgc 248 |||||||||||| |||||| |||||||||| ||||||||| Sbjct: 99866 gcaggtgcagctctccgagtcggagatccgccagctctgc 99905
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 209 gcaggtgcagctgtccgaggcggagatccggcagctctgc 248 |||||||||||| |||||| |||||||||| ||||||||| Sbjct: 8854548 gcaggtgcagctctccgagtcggagatccgccagctctgc 8854587 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 ccgaggcggagatccggcagctct 246 ||||||||||||||||| |||||| Sbjct: 1302619 ccgaggcggagatccgggagctct 1302642
>dbj|AK073140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022I01, full insert sequence Length = 1621 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 209 gcaggtgcagctgtccgaggcggagatccggcagctctgc 248 |||||||||||| |||||| |||||||||| ||||||||| Sbjct: 239 gcaggtgcagctctccgagtcggagatccgccagctctgc 278 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 298 aggcccccgtcaagatctgcggtgatatccatggtcagt 336 |||| ||| |||||||||||||||| ||||||||||||| Sbjct: 328 aggcgcccatcaagatctgcggtgacatccatggtcagt 366
>gb|BT024094.1| Zea mays clone EL01N0530G01 mRNA sequence Length = 1888 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 275 ccagcccaacctcctccgcatccaggcccccgtcaagatctgcggtgatatccatggtca 334 |||||||||||||||| || |||| ||| |||||||||||||||| ||||||||||| Sbjct: 441 ccagcccaacctcctcgagctcgaggcgcccatcaagatctgcggtgacatccatggtca 500 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 209 gcaggtgcagctgtccgaggcggagatccggcagct 244 |||||||||||| || ||| |||||||||| ||||| Sbjct: 375 gcaggtgcagctctctgagtcggagatccgccagct 410
>gb|AY109296.1| Zea mays PCO117045 mRNA sequence Length = 1884 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 275 ccagcccaacctcctccgcatccaggcccccgtcaagatctgcggtgatatccatggtca 334 |||||||||||||||| || |||| ||| |||||||||||||||| ||||||||||| Sbjct: 302 ccagcccaacctcctcgagctcgaggcgcccatcaagatctgcggtgacatccatggtca 361 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 209 gcaggtgcagctgtccgaggcggagatccggcagct 244 |||||||||||| || ||| |||||||||| ||||| Sbjct: 236 gcaggtgcagctctctgagtcggagatccgccagct 271
>gb|U31773.1|OSU31773 Oryza sativa protein phosphatase 1 mRNA, complete cds Length = 954 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 298 aggcccccgtcaagatctgcggtgatatccatggtcagt 336 |||| ||| |||||||||||||||| ||||||||||||| Sbjct: 185 aggcgcccatcaagatctgcggtgacatccatggtcagt 223
>ref|XM_468432.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1525 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 298 aggcccccgtcaagatctgcggtgatatccatggtcagtttgttgatcttctgaggttgt 357 |||||||| |||| |||||||||||| | ||||| |||| | |||||| |||||| ||| Sbjct: 411 aggcccccatcaaaatctgcggtgatgttcatggacagtattctgatctcctgaggctgt 470 Query: 358 ttgatt 363 |||||| Sbjct: 471 ttgatt 476
>gb|BT014500.1| Lycopersicon esculentum clone 133871R, mRNA sequence Length = 1419 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||| |||||||||||||||| Sbjct: 259 tcaagatctgcggggatatccatggtcagt 288
>emb|AJ781055.1| Drosophila melanogaster Pp1Y2 gene Length = 4612 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 309 aagatctgcggtgatatccatggtcagttt 338 ||||||||||||||||| |||||||||||| Sbjct: 2669 aagatctgcggtgatatacatggtcagttt 2640
>gb|AF427494.1|AF427494 Drosophila melanogaster protein phosphatase 1 catalytic subunit (Pp1Y2) mRNA, complete cds Length = 930 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 309 aagatctgcggtgatatccatggtcagttt 338 ||||||||||||||||| |||||||||||| Sbjct: 172 aagatctgcggtgatatacatggtcagttt 201
>gb|AF383877.1|AF383877 Oryza sativa protein phosphatase mRNA, complete cds Length = 1428 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 298 aggcccccgtcaagatctgcggtgatatccatggtcagtttgttgatcttctgaggttgt 357 |||||||| |||| |||||||||||| | ||||| |||| | |||||| |||||| ||| Sbjct: 439 aggcccccatcaaaatctgcggtgatgttcatggacagtattctgatctcctgaggctgt 498 Query: 358 ttgatt 363 |||||| Sbjct: 499 ttgatt 504
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.001 Identities = 80/98 (81%) Strand = Plus / Minus Query: 223 ccgaggcggagatccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagccca 282 |||| ||||||||||| ||||||||| || ||||||| || |||| |||||||||| Sbjct: 3266061 ccgacgcggagatccgcaagctctgcgccgccgccaaggacgtcttcctctcccagccca 3266002 Query: 283 acctcctccgcatccaggcccccgtcaagatctgcggt 320 |||||||| || |||||||| |||| ||||||||| Sbjct: 3266001 acctcctcgagctcgaggcccccatcaaaatctgcggt 3265964
>ref|NM_001015497.1| Drosophila melanogaster CG40448-PA.3 (CG40448), mRNA Length = 837 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 309 aagatctgcggtgatatccatggtcagttt 338 ||||||||||||||||| |||||||||||| Sbjct: 172 aagatctgcggtgatatacatggtcagttt 201
>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14 Length = 150650 Score = 52.0 bits (26), Expect = 0.001 Identities = 80/98 (81%) Strand = Plus / Minus Query: 223 ccgaggcggagatccggcagctctgcgtcgacgccaagcgggtgctcctgtcccagccca 282 |||| ||||||||||| ||||||||| || ||||||| || |||| |||||||||| Sbjct: 53424 ccgacgcggagatccgcaagctctgcgccgccgccaaggacgtcttcctctcccagccca 53365 Query: 283 acctcctccgcatccaggcccccgtcaagatctgcggt 320 |||||||| || |||||||| |||| ||||||||| Sbjct: 53364 acctcctcgagctcgaggcccccatcaaaatctgcggt 53327
>dbj|AK120439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098H20, full insert sequence Length = 1525 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 298 aggcccccgtcaagatctgcggtgatatccatggtcagtttgttgatcttctgaggttgt 357 |||||||| |||| |||||||||||| | ||||| |||| | |||||| |||||| ||| Sbjct: 411 aggcccccatcaaaatctgcggtgatgttcatggacagtattctgatctcctgaggctgt 470 Query: 358 ttgatt 363 |||||| Sbjct: 471 ttgatt 476
>ref|XM_652922.1| Aspergillus nidulans FGSC A4 serine/threonine protein phosphatase PP1 (AN0410.2), mRNA Length = 972 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatgg 331 ||||||||||||||||||||||||| Sbjct: 173 tcaagatctgcggtgatatccatgg 197
>gb|BT009603.1| Triticum aestivum clone wre1n.pk0081.a4:fis, full insert mRNA sequence Length = 1322 Score = 50.1 bits (25), Expect = 0.005 Identities = 94/117 (80%) Strand = Plus / Plus Query: 215 gcagctgtccgaggcggagatccggcagctctgcgtcgacgccaagcgggtgctcctgtc 274 ||||||||||||| |||||||| ||||||||||| || | ||||| | | |||| | Sbjct: 10 gcagctgtccgagtcggagatcaagcagctctgcgccgcctccaaggagatcttcctcgc 69 Query: 275 ccagcccaacctcctccgcatccaggcccccgtcaagatctgcggtgatatccatgg 331 |||||||||||||| || |||||||| |||| |||||||||||| ||||||| Sbjct: 70 gcagcccaacctcctggagctcgaggcccccatcaaaatctgcggtgatgtccatgg 126
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 306 gtcaagatctgcggtgatatccatggtcagttt 338 |||| |||||| ||||||||||||||||||||| Sbjct: 833845 gtcacgatctgtggtgatatccatggtcagttt 833877
>gb|M27067.1|EMEBIMG Aspergillus nidulans phosphoprotein phosphatase 1 mRNA, complete cds Length = 2248 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatgg 331 ||||||||||||||||||||||||| Sbjct: 1058 tcaagatctgcggtgatatccatgg 1082
>gb|BC072730.1| Xenopus laevis MGC79074 protein, mRNA (cDNA clone MGC:79074 IMAGE:4963300), complete cds Length = 1171 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 309 aagatctgcggtgatatccatggtcagt 336 ||||||||||||||||||||||| |||| Sbjct: 192 aagatctgcggtgatatccatggacagt 219
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 155 cgcggcggtggacgaggtggtgcg 178 |||||||||||||||||||||||| Sbjct: 2293140 cgcggcggtggacgaggtggtgcg 2293117 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 165 gacgaggtggtgcggcggctgg 186 |||||||||||||||||||||| Sbjct: 1642483 gacgaggtggtgcggcggctgg 1642462 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 cggcggtggacgaggtggtg 176 |||||||||||||||||||| Sbjct: 2670019 cggcggtggacgaggtggtg 2670000 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 gaggtggtgcggcggctggt 187 |||||||||||||||||||| Sbjct: 1319404 gaggtggtgcggcggctggt 1319385 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ggtgcggcggctggtcgagg 192 |||||||||||||||||||| Sbjct: 1068874 ggtgcggcggctggtcgagg 1068855
>ref|NM_114549.2| Arabidopsis thaliana TOPP5; protein phosphatase type 1 AT3G46820 (TOPP5) mRNA, complete cds Length = 1581 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 300 gcccccgtcaagatctgcggtgatatccatggtca 334 ||||| || ||||||||||||||||| |||||||| Sbjct: 472 gcccctgttaagatctgcggtgatattcatggtca 506
>emb|Z93769.1|NTNPP2 N.tabacum npp2 mRNA for protein phosphatase type 1 Length = 1685 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagtttgttgatcttctgagg 353 |||||||||| ||||| || ||||| |||| || ||||||||||||| Sbjct: 573 tcaagatctgtggtgacattcatggacagtatggtgatcttctgagg 619
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 179 gcggctggtcgagggcggccgcggcgg 205 ||||||||||||||||||||| ||||| Sbjct: 1539012 gcggctggtcgagggcggccgtggcgg 1538986
>gb|AY062037.1| Canis familiaris protein phosphatase type 1 alpha catalytic subunit mRNA, complete cds Length = 1106 Score = 46.1 bits (23), Expect = 0.081 Identities = 35/39 (89%) Strand = Plus / Plus Query: 298 aggcccccgtcaagatctgcggtgatatccatggtcagt 336 |||| ||| |||||||||||||||| |||||||| |||| Sbjct: 169 aggcacccctcaagatctgcggtgacatccatggccagt 207
>gb|BT024715.1| Arabidopsis thaliana At3g46820 mRNA, complete cds Length = 939 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 300 gcccccgtcaagatctgcggtgatatccatggtca 334 ||||| || ||||||||||||||||| |||||||| Sbjct: 187 gcccctgttaagatctgcggtgatattcatggtca 221
>emb|BX823610.1|CNS0A6JL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZF10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1486 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 300 gcccccgtcaagatctgcggtgatatccatggtca 334 ||||| || ||||||||||||||||| |||||||| Sbjct: 454 gcccctgttaagatctgcggtgatattcatggtca 488
>ref|NM_001003064.1| Canis familiaris protein phosphatase 1, catalytic subunit, alpha isoform (PPP1CA), mRNA Length = 1106 Score = 46.1 bits (23), Expect = 0.081 Identities = 35/39 (89%) Strand = Plus / Plus Query: 298 aggcccccgtcaagatctgcggtgatatccatggtcagt 336 |||| ||| |||||||||||||||| |||||||| |||| Sbjct: 169 aggcacccctcaagatctgcggtgacatccatggccagt 207
>gb|AY087200.1| Arabidopsis thaliana clone 32787 mRNA, complete sequence Length = 1579 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 300 gcccccgtcaagatctgcggtgatatccatggtca 334 ||||| || ||||||||||||||||| |||||||| Sbjct: 475 gcccctgttaagatctgcggtgatattcatggtca 509
>gb|BT024175.1| Zea mays clone EL01N0421F03 mRNA sequence Length = 1673 Score = 46.1 bits (23), Expect = 0.081 Identities = 35/39 (89%) Strand = Plus / Plus Query: 298 aggcccccgtcaagatctgcggtgatatccatggtcagt 336 |||||||| |||| |||||||||||| ||||||| |||| Sbjct: 574 aggcccccatcaaaatctgcggtgatgtccatggccagt 612
>gb|M60215.1|MZEZMPP1 Z.mays protein phosphatase-1 (ZmPP1) mRNA, complete cds Length = 1644 Score = 46.1 bits (23), Expect = 0.081 Identities = 35/39 (89%) Strand = Plus / Plus Query: 298 aggcccccgtcaagatctgcggtgatatccatggtcagt 336 |||||||| |||| |||||||||||| ||||||| |||| Sbjct: 556 aggcccccatcaaaatctgcggtgatgtccatggccagt 594
>gb|M93412.1|ATHPPHAD Arabidopsis thaliana phosphoprotein phosphatase-type 1 catalytic site mRNA, complete cds Length = 1289 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 300 gcccccgtcaagatctgcggtgatatccatggtca 334 ||||| || ||||||||||||||||| |||||||| Sbjct: 187 gcccctgttaagatctgcggtgatattcatggtca 221
>ref|NM_122666.3| Arabidopsis thaliana TOPP8; protein phosphatase type 1 AT5G27840 (TOPP8) transcript variant AT5G27840.2 mRNA, complete cds Length = 1639 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagtttgttgatcttctgaggttgtttga 361 |||||||||||||| |||||||| | | |||||| ||||||||||||| Sbjct: 388 atctgcggtgatattcatggtcaatatcaagatcttttgaggttgtttga 437
>ref|NM_180754.2| Arabidopsis thaliana TOPP8; protein phosphatase type 1 AT5G27840 (TOPP8) transcript variant AT5G27840.1 mRNA, complete cds Length = 1549 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagtttgttgatcttctgaggttgtttga 361 |||||||||||||| |||||||| | | |||||| ||||||||||||| Sbjct: 392 atctgcggtgatattcatggtcaatatcaagatcttttgaggttgtttga 441
>ref|NM_128494.3| Arabidopsis thaliana TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1); protein phosphatase type 1 AT2G29400 (TOPP1) mRNA, complete cds Length = 1403 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||||||||| ||||| |||| Sbjct: 330 tcaagatctgcggtgatattcatgggcagt 359
>gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete sequence Length = 183316 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||| ||||||||||| |||| Sbjct: 19020 tcaagatctgcggcgatatccatggccagt 19049
>gb|BC070008.1| Danio rerio zgc:85729, mRNA (cDNA clone MGC:85729 IMAGE:6970086), complete cds Length = 2224 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 |||||||||| |||||| |||||||||||| Sbjct: 582 tcaagatctgtggtgatgtccatggtcagt 611
>ref|XM_958189.1| Neurospora crassa OR74A hypothetical protein (NCU08410.1) partial mRNA Length = 825 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 267 ctcctgtcccagcccaacctcctccg 292 ||||||||||||||||| |||||||| Sbjct: 777 ctcctgtcccagcccaaactcctccg 752
>ref|XM_329455.1| Neurospora crassa OR74A hypothetical protein (NCU08410.1) partial mRNA Length = 825 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 267 ctcctgtcccagcccaacctcctccg 292 ||||||||||||||||| |||||||| Sbjct: 777 ctcctgtcccagcccaaactcctccg 752
>gb|U80922.2|ATU80922 Arabidopsis thaliana serine/threonine protein phosphatase type one (TOPP8) gene, complete cds Length = 1502 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagtttgttgatcttctgaggttgtttga 361 |||||||||||||| |||||||| | | |||||| ||||||||||||| Sbjct: 329 atctgcggtgatattcatggtcaatatcaagatcttttgaggttgtttga 378
>emb|X63558.1|BOBOPP1 B.oleracea mRNA for type 1 protein serine/threonine phosphatase Length = 1530 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||||||||| ||||| |||| Sbjct: 459 tcaagatctgcggtgatattcatgggcagt 488
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 ggcggctggtcgagggcggccg 199 |||||||||||||||||||||| Sbjct: 1284761 ggcggctggtcgagggcggccg 1284782
>gb|AY142593.1| Arabidopsis thaliana putative phosphoprotein phosphatase type 1 catalytic subunit (At2g29400) mRNA, complete cds Length = 988 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||||||||| ||||| |||| Sbjct: 215 tcaagatctgcggtgatattcatgggcagt 244
>gb|AY080871.1| Arabidopsis thaliana putative phosphoprotein phosphatase type 1 catalytic subunit (At2g29400) mRNA, complete cds Length = 1389 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||||||||| ||||| |||| Sbjct: 321 tcaagatctgcggtgatattcatgggcagt 350
>emb|X69974.1|DMPP113C D.melanogaster PP1 13C gene for protein phosphatase 1 13C Length = 1884 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||| ||||||||||| |||| Sbjct: 692 tcaagatctgcggcgatatccatggccagt 721
>emb|X64328.1|ATPP1ATM A.thaliana PP1-At mRNA for protein phosphatase-1 Length = 1349 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||||||||| ||||| |||| Sbjct: 285 tcaagatctgcggtgatattcatgggcagt 314
>gb|DQ099088.1| Arachis stenosperma clone AS1RN15B10 microsatellite sequence Length = 643 Score = 44.1 bits (22), Expect = 0.32 Identities = 40/46 (86%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagtttgttgatcttctgag 352 |||||||||| || |||||||||||||| | | |||||||||||| Sbjct: 305 tcaagatctgtggggatatccatggtcaatattatgatcttctgag 350
>gb|AY081492.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1066 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagtttgttgatcttctgaggttgtttga 361 |||||||||||||| |||||||| | | |||||| ||||||||||||| Sbjct: 187 atctgcggtgatattcatggtcaatatcaagatcttttgaggttgtttga 236
>ref|NM_080182.2| Drosophila melanogaster Protein phosphatase 1 at 13C CG9156-RA (Pp1-13C), mRNA Length = 1894 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||| ||||||||||| |||| Sbjct: 825 tcaagatctgcggcgatatccatggccagt 854
>gb|AY060272.1| Drosophila melanogaster GH10637 full length cDNA Length = 1910 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||| ||||||||||| |||| Sbjct: 825 tcaagatctgcggcgatatccatggccagt 854
>ref|XM_692775.1| PREDICTED: Danio rerio similar to protein phosphatase 1, catalytic subunit, alpha (LOC573730), mRNA Length = 2220 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 |||||||||| |||||| |||||||||||| Sbjct: 612 tcaagatctgtggtgatgtccatggtcagt 641
>gb|AY042854.1| Arabidopsis thaliana serine/threonine protein phosphatase (MOJ9.27) mRNA, complete cds Length = 1546 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagtttgttgatcttctgaggttgtttga 361 |||||||||||||| |||||||| | | |||||| ||||||||||||| Sbjct: 390 atctgcggtgatattcatggtcaatatcaagatcttttgaggttgtttga 439
>emb|BX819531.1|CNS0A9W2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB87ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1212 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||||||||| ||||| |||| Sbjct: 306 tcaagatctgcggtgatattcatgggcagt 335
>emb|BX819520.1|CNS0AA1T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB86ZD09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1350 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||||||||| ||||| |||| Sbjct: 307 tcaagatctgcggtgatattcatgggcagt 336
>emb|BX819638.1|CNS0A9GO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS10ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1290 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||||||||| ||||| |||| Sbjct: 294 tcaagatctgcggtgatattcatgggcagt 323
>emb|BX829841.1|CNS0A1AR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB40ZC02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1464 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagtttgttgatcttctgaggttgtttga 361 |||||||||||||| |||||||| | | |||||| ||||||||||||| Sbjct: 375 atctgcggtgatattcatggtcaatatcaagatcttttgaggttgtttga 424
>emb|BX832480.1|CNS0A10M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZH07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1460 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagtttgttgatcttctgaggttgtttga 361 |||||||||||||| |||||||| | | |||||| ||||||||||||| Sbjct: 324 atctgcggtgatattcatggtcaatatcaagatcttttgaggttgtttga 373
>emb|BX831124.1|CNS0A0TO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1516 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagtttgttgatcttctgaggttgtttga 361 |||||||||||||| |||||||| | | |||||| ||||||||||||| Sbjct: 392 atctgcggtgatattcatggtcaatatcaagatcttttgaggttgtttga 441
>gb|AC133589.24| Mus musculus chromosome 1, clone RP24-475M18, complete sequence Length = 167647 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 20 tcccaatcccccaccctttctctctc 45 |||| ||||||||||||||||||||| Sbjct: 92818 tccccatcccccaccctttctctctc 92793
>gb|AY087823.1| Arabidopsis thaliana clone 38656 mRNA, complete sequence Length = 1526 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagtttgttgatcttctgaggttgtttga 361 |||||||||||||| |||||||| | | |||||| ||||||||||||| Sbjct: 388 atctgcggtgatattcatggtcaatatcaagatcttttgaggttgtttga 437
>ref|NM_214811.1| Danio rerio zgc:85729 (zgc:85729), mRNA Length = 2224 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 |||||||||| |||||| |||||||||||| Sbjct: 582 tcaagatctgtggtgatgtccatggtcagt 611
>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete sequence Length = 341520 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||| ||||||||||| |||| Sbjct: 296721 tcaagatctgcggcgatatccatggccagt 296692
>gb|M93408.1|ATH1PPHA Arabidopsis thaliana phosphoprotein phosphatase-type 1 catalytic subunit mRNA, complete cds Length = 1340 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatggtcagt 336 ||||||||||||||||||| ||||| |||| Sbjct: 273 tcaagatctgcggtgatattcatgggcagt 302
>ref|NM_111431.2| Arabidopsis thaliana protein phosphatase type 1/ protein serine/threonine phosphatase AT3G05580 mRNA, complete cds Length = 1465 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagt 336 |||||||||||||||||||| |||| Sbjct: 326 atctgcggtgatatccatggacagt 350
>ref|NM_180887.2| Arabidopsis thaliana TOPP2; protein serine/threonine phosphatase AT5G59160 (TOPP2) transcript variant AT5G59160.1 mRNA, complete cds Length = 1447 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatgg 331 ||||||||||||||||||| ||||| Sbjct: 394 tcaagatctgcggtgatattcatgg 418
>ref|NM_125306.2| Arabidopsis thaliana TOPP2; protein serine/threonine phosphatase AT5G59160 (TOPP2) transcript variant AT5G59160.2 mRNA, complete cds Length = 1671 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatgg 331 ||||||||||||||||||| ||||| Sbjct: 424 tcaagatctgcggtgatattcatgg 448
>ref|NM_001037026.1| Arabidopsis thaliana TOPP2; protein serine/threonine phosphatase AT5G59160 (TOPP2) transcript variant AT5G59160.3 mRNA, complete cds Length = 1424 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatgg 331 ||||||||||||||||||| ||||| Sbjct: 424 tcaagatctgcggtgatattcatgg 448
>gb|AC165347.4| Mus musculus BAC clone RP23-348B21 from chromosome 13, complete sequence Length = 205783 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 acaccccattcccaatcccccaccc 35 |||||||| |||||||||||||||| Sbjct: 46472 acaccccactcccaatcccccaccc 46448
>gb|BT010532.1| Arabidopsis thaliana At3g05580 gene, complete cds Length = 957 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagt 336 |||||||||||||||||||| |||| Sbjct: 187 atctgcggtgatatccatggacagt 211
>emb|Z12163.1|ATPPHOS1 A.thaliana mRNA encoding protein phosphatase 1A Length = 1436 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatgg 331 ||||||||||||||||||| ||||| Sbjct: 403 tcaagatctgcggtgatattcatgg 427
>gb|BT024861.1| Arabidopsis thaliana At5g59160 gene, complete cds Length = 939 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatgg 331 ||||||||||||||||||| ||||| Sbjct: 194 tcaagatctgcggtgatattcatgg 218
>emb|BX829528.1|CNS0A07D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZC06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1336 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatgg 331 ||||||||||||||||||| ||||| Sbjct: 357 tcaagatctgcggtgatattcatgg 381
>gb|BT002401.1| Arabidopsis thaliana phosphoprotein phosphatase 1 catalytic chain (At5g59160) mRNA, complete cds Length = 1393 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatgg 331 ||||||||||||||||||| ||||| Sbjct: 401 tcaagatctgcggtgatattcatgg 425
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 gcggccgcggcggtcggcagg 213 ||||||||||||||||||||| Sbjct: 5000047 gcggccgcggcggtcggcagg 5000027
>dbj|AK175443.1| Arabidopsis thaliana mRNA for putative serine/threonine protein phosphatase type one, complete cds, clone: RAFL21-87-E07 Length = 1568 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagt 336 |||||||||||||||||||| |||| Sbjct: 457 atctgcggtgatatccatggacagt 481
>gb|AE005135.1| Halobacterium sp. NRC-1 section 166 of 170 of the complete genome Length = 10922 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 cgagggcggccgcggcggtcg 208 ||||||||||||||||||||| Sbjct: 7110 cgagggcggccgcggcggtcg 7090
>ref|XM_564354.1| Anopheles gambiae str. PEST ENSANGP00000026004 (ENSANGG00000019559), partial mRNA Length = 1447 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagt 336 ||||||||||| ||||||||||||| Sbjct: 130 atctgcggtgacatccatggtcagt 154
>ref|XM_564353.1| Anopheles gambiae str. PEST ENSANGP00000029683 (ENSANGG00000019559), partial mRNA Length = 1215 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagt 336 ||||||||||| ||||||||||||| Sbjct: 130 atctgcggtgacatccatggtcagt 154
>ref|XM_309483.2| Anopheles gambiae str. PEST ENSANGP00000022048 (ENSANGG00000019559), partial mRNA Length = 1352 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 atctgcggtgatatccatggtcagt 336 ||||||||||| ||||||||||||| Sbjct: 549 atctgcggtgacatccatggtcagt 573
>gb|AY104364.1| Zea mays PCO105529 mRNA sequence Length = 1358 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gggccatggagggcgcggcgg 162 ||||||||||||||||||||| Sbjct: 531 gggccatggagggcgcggcgg 551
>gb|M93409.1|ATHPPHAA Arabidopsis thaliana phosphoprotein phophatase-type 1 catalytic subunit mRNA, complete cds Length = 1666 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 tcaagatctgcggtgatatccatgg 331 ||||||||||||||||||| ||||| Sbjct: 425 tcaagatctgcggtgatattcatgg 449
>ref|XM_483462.1| Oryza sativa (japonica cultivar-group), mRNA Length = 543 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 ggcggtggacgaggtggtgcggcg 181 ||||||||||||||||| |||||| Sbjct: 156 ggcggtggacgaggtggggcggcg 179
>ref|XM_468587.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 ccgaggcggagatccggcagctct 246 ||||||||||||||||| |||||| Sbjct: 254 ccgaggcggagatccgggagctct 277
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ggtgcggcggctggtcgagg 192 |||||||||||||||||||| Sbjct: 3252 ggtgcggcggctggtcgagg 3271
>gb|AY020570.1| Oryza sativa microsatellite MRG2895 containing (GT)X16, closest to marker G1149, genomic sequence Length = 232 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 ggcggtggacgaggtggtgcggcg 181 ||||||||||||||||| |||||| Sbjct: 29 ggcggtggacgaggtggggcggcg 6
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ggcggccgcggcggtcggca 211 |||||||||||||||||||| Sbjct: 3887283 ggcggccgcggcggtcggca 3887302
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 gaggtggtgcggcggctggtcgag 191 ||||| |||||||||||||||||| Sbjct: 1860209 gaggtcgtgcggcggctggtcgag 1860232
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 gtgcggcggctggtcgagggcggc 197 ||||||||||||| |||||||||| Sbjct: 885967 gtgcggcggctgggcgagggcggc 885990
>gb|AC163770.3| Pan troglodytes BAC clone CH251-4E4 from chromosome unknown, complete sequence Length = 210071 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ctgtccgaggcggagatccg 238 |||||||||||||||||||| Sbjct: 43815 ctgtccgaggcggagatccg 43796
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cgaggtggtgcggcggctgg 186 |||||||||||||||||||| Sbjct: 1516689 cgaggtggtgcggcggctgg 1516670
>gb|AC123075.5| Mus musculus BAC clone RP23-181C16 from chromosome 3, complete sequence Length = 198063 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 attcccaatcccccaccctt 37 |||||||||||||||||||| Sbjct: 183670 attcccaatcccccaccctt 183651
>gb|BT014167.1| Lycopersicon esculentum clone 133302F, mRNA sequence Length = 1545 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 tgcggtgatatccatggtcagttt 338 ||||||||||||||||| |||||| Sbjct: 429 tgcggtgatatccatggacagttt 452
>gb|AY325817.1| Lycopersicon esculentum protein phosphatase 2A catalytic subunit (PP2Ac1) mRNA, complete cds Length = 1380 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 tgcggtgatatccatggtcagttt 338 ||||||||||||||||| |||||| Sbjct: 423 tgcggtgatatccatggacagttt 446
>ref|XM_814374.1| Trypanosoma cruzi strain CL Brener fibrillarin (Tc00.1047053506211.250) partial mRNA Length = 879 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 ggagggcgcggcggtggacgaggtggtg 176 ||||| |||||||||||||| ||||||| Sbjct: 31 ggaggtcgcggcggtggacgtggtggtg 58
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgaggtggtgcggcggctgg 186 |||||||||||||||||||| Sbjct: 3494828 cgaggtggtgcggcggctgg 3494847
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 ggtggtgcggcggctggtcgaggg 193 |||||||||||| ||||||||||| Sbjct: 2946174 ggtggtgcggcgcctggtcgaggg 2946197
>emb|AL031780.1|HS470K1 Human DNA sequence from clone RP3-470K1 on chromosome 6p22.1-23, complete sequence Length = 103613 Score = 40.1 bits (20), Expect = 5.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 97 cgggagaataag-gagggaagatgatga 123 |||||||||||| ||||||||||||||| Sbjct: 61811 cgggagaataagagagggaagatgatga 61838
>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete sequence Length = 201265 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 156 gcggcggtggacgaggtggtgcggcggc 183 ||||||| ||| |||||||||||||||| Sbjct: 16074 gcggcggcggaggaggtggtgcggcggc 16047
>emb|Z48221.1|PVD22PP1 P.vulgaris mRNA for protein phosphatase 1 (PP1) Length = 1419 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 tctgcggtgatatccatggtcagt 336 ||||||||||||| |||||||||| Sbjct: 335 tctgcggtgatatacatggtcagt 358
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ggcggccgcggcggtcggca 211 |||||||||||||||||||| Sbjct: 76274 ggcggccgcggcggtcggca 76293
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gctggtcgagggcggccgcg 201 |||||||||||||||||||| Sbjct: 327081 gctggtcgagggcggccgcg 327100
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gctggtcgagggcggccgcg 201 |||||||||||||||||||| Sbjct: 331734 gctggtcgagggcggccgcg 331753
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gctggtcgagggcggccgcg 201 |||||||||||||||||||| Sbjct: 76329 gctggtcgagggcggccgcg 76348
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 ggcggccgcggcggtcggca 211 |||||||||||||||||||| Sbjct: 88788 ggcggccgcggcggtcggca 88807
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ggttgtttgatttgggtggt 371 |||||||||||||||||||| Sbjct: 3694346 ggttgtttgatttgggtggt 3694327
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 ggcggctggtcgagggcggccgcg 201 |||||||| ||||||||||||||| Sbjct: 1374174 ggcggctgatcgagggcggccgcg 1374151
>dbj|AK155719.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730209L11 product:hypothetical Glycine-rich region profile containing protein, full insert sequence Length = 1400 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 156 gcggcggtggacgaggtggtgcggcggc 183 ||||||| ||| |||||||||||||||| Sbjct: 118 gcggcggcggaggaggtggtgcggcggc 145
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cggcggctggtcgagggcgg 196 |||||||||||||||||||| Sbjct: 3001914 cggcggctggtcgagggcgg 3001895
>gb|AY220096.1| Phaseolus acutifolius serine threonine protein phosphatase mRNA, complete cds Length = 1316 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 tctgcggtgatatccatggtcagt 336 ||||||||||||| |||||||||| Sbjct: 243 tctgcggtgatatacatggtcagt 266
>gb|AC010081.4|AC010081 Homo sapiens BAC clone RP11-65E7 from Y, complete sequence Length = 176781 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 catggtcagtttgttgatct 346 |||||||||||||||||||| Sbjct: 158273 catggtcagtttgttgatct 158254
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12, complete sequence Length = 146241 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 ccgaggcggagatccggcagctct 246 ||||||||||||||||| |||||| Sbjct: 107523 ccgaggcggagatccgggagctct 107546
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 ggcggtggacgaggtggtgcggcg 181 ||||||||||||||||| |||||| Sbjct: 75689 ggcggtggacgaggtggggcggcg 75712
>gb|AC117735.8| Mus musculus chromosome 5, clone RP24-132L16, complete sequence Length = 183861 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 caccccattcccaatcccccaccc 35 ||||||| |||||||||||||||| Sbjct: 88261 caccccactcccaatcccccaccc 88284
>dbj|AK066740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082B19, full insert sequence Length = 1092 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 ccgaggcggagatccggcagctct 246 ||||||||||||||||| |||||| Sbjct: 390 ccgaggcggagatccgggagctct 413
>gb|AC127225.5| Mus musculus BAC clone RP24-499N1 from 3, complete sequence Length = 190949 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 attcccaatcccccaccctt 37 |||||||||||||||||||| Sbjct: 189508 attcccaatcccccaccctt 189527
>emb|BX255932.4| Zebrafish DNA sequence from clone DKEY-31D8 in linkage group 20, complete sequence Length = 125028 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gcagctctgcgtcgacgcca 258 |||||||||||||||||||| Sbjct: 22091 gcagctctgcgtcgacgcca 22110
>dbj|AP000926.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-762B21, complete sequence Length = 196972 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aggagggaagatgatgatga 126 |||||||||||||||||||| Sbjct: 46849 aggagggaagatgatgatga 46868
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gcagctgtccgaggcggaga 234 |||||||||||||||||||| Sbjct: 2156095 gcagctgtccgaggcggaga 2156114
>dbj|AB038791.1| Vicia faba vfPPX-II mRNA for type X protein phosphatase-II, partial cds Length = 236 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 tgcggtgatatccatggtcagttt 338 ||||||||||| |||||||||||| Sbjct: 1 tgcggtgatattcatggtcagttt 24 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,343,161 Number of Sequences: 3902068 Number of extensions: 3343161 Number of successful extensions: 83837 Number of sequences better than 10.0: 145 Number of HSP's better than 10.0 without gapping: 137 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 81803 Number of HSP's gapped (non-prelim): 2023 length of query: 374 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 352 effective length of database: 17,147,199,772 effective search space: 6035814319744 effective search space used: 6035814319744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)