Clone Name | bart52e09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor | 46 | 6e-05 | 2 | UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor | 44 | 2e-04 | 3 | UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein... | 42 | 8e-04 |
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>UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor| Length = 287 Score = 45.8 bits (107), Expect = 6e-05 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 4/108 (3%) Frame = +1 Query: 151 SGVDAIGTYCAK---NGTSAET-QASIDQVLAALVPXXXXXXXXXXXXXXXXXXVWGLAQ 318 S D + T+C K N TS T +++ +L+ L V G+ Sbjct: 24 SDPDDMETFCMKSSRNTTSNTTYNKNLNTLLSTLSNQSSFANYYNLTTGLASDTVHGMFL 83 Query: 319 CRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTANFI 462 C GDV R C+ C+ A E+A +C + ++ C++RYS F+ Sbjct: 84 CTGDVNRTTCNACVKNATIEIAKNCTNHREAIIYNVDCMVRYSDKFFL 131 Score = 31.6 bits (70), Expect = 1.1 Identities = 12/49 (24%), Positives = 24/49 (48%) Frame = +1 Query: 310 LAQCRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTAN 456 + QC D+ ++C+ CL A +E+ C ++ C++ + T N Sbjct: 197 IVQCTPDLDPRNCTTCLKLALQELTECCGNQVWAFIYTPNCMVSFDTYN 245
>UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor| Length = 286 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = +1 Query: 301 VWGLAQCRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTANFI 462 V G+ C GDV R C+ C+ A E+A +C + ++Y C++RYS F+ Sbjct: 79 VHGMFLCIGDVNRTTCNACVKNATIEIAKNCTNHREAIIYYFSCMVRYSDKFFL 132 Score = 31.2 bits (69), Expect = 1.4 Identities = 13/49 (26%), Positives = 24/49 (48%) Frame = +1 Query: 310 LAQCRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTAN 456 + QC + ++C+ CL A +E+ C +F CL+ + T+N Sbjct: 198 VVQCSPHLDPKNCTTCLKLALQELTQCCGDQLWAFIFTPKCLVSFDTSN 246
>UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein 3 precursor| Length = 287 Score = 42.0 bits (97), Expect = 8e-04 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 4/108 (3%) Frame = +1 Query: 151 SGVDAIGTYC---AKNGTSAET-QASIDQVLAALVPXXXXXXXXXXXXXXXXXXVWGLAQ 318 S D + T+C ++N T T +++ +L+ V+G+ Sbjct: 28 SETDHMDTFCIDSSRNTTGNTTYNKNLNTMLSTFRNQSSIVNNYNLTTGLASDTVYGMFL 87 Query: 319 CRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTANFI 462 C GDV C+ C+ A E+ +C + ++Y C++RYS F+ Sbjct: 88 CTGDVNITTCNNCVKNATIEIVKNCTNHREAIIYYIDCMVRYSDKFFL 135 Score = 30.4 bits (67), Expect = 2.4 Identities = 12/45 (26%), Positives = 21/45 (46%) Frame = +1 Query: 310 LAQCRGDVPRQDCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRY 444 L QC + ++C++CL A +E+ C +F C + Y Sbjct: 201 LVQCSPHLNPENCTICLEYALQEIIDCCSDKFWAMIFTPNCFVNY 245 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,948,896 Number of Sequences: 219361 Number of extensions: 317535 Number of successful extensions: 886 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 875 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 886 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)