>YA03_SCHPO (Q09676) Hypothetical protein C5H10.03 in chromosome I|
          Length = 219

 Score = 35.4 bits (80), Expect = 0.037
 Identities = 22/65 (33%), Positives = 33/65 (50%)
 Frame = +3

Query: 102 KTIYLVRHAQGIHNVEGEKDFAAYKSHALLDAQLTPLGWSQVDTLREHVTKSGLAKKIEL 281
           KT+YL+RH Q  HNV  ++D      H + D  LT  G  Q + L + +    +   I+ 
Sbjct: 7   KTVYLIRHGQAQHNVGPDED------HNIRDPVLTSEGIEQCEALAKELESKQI--PIDG 58

Query: 282 VVVSP 296
           +V SP
Sbjct: 59  IVCSP 63

>YKM8_YEAST (P36069) Hypothetical 33.8 kDa protein in MYO3-PGM1 intergenic|
           region
          Length = 295

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
 Frame = +3

Query: 102 KTIYLVRHAQGIHNVE----GEKDFAAYKS-------HALLDAQLTPLGWSQV 227
           K + L RH QG HN      G + + AY S          LD++LTPLG  QV
Sbjct: 54  KLLILARHGQGYHNAAILRYGMEKWDAYWSLLSGDEHGEWLDSKLTPLGKDQV 106

>RBL_METAC (Q8THG2) Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO)|
          Length = 428

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 156 KDFAAYKSHALLDAQLTPLGWSQVDTLREHVTKSGLA 266
           KD  A  S+A++D  + P GW+ + TLRE     GLA
Sbjct: 234 KDLGA--SYAMID--IVPTGWTALQTLREAAADEGLA 266

>RBL_METMA (Q8PXG9) Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO)|
          Length = 428

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 156 KDFAAYKSHALLDAQLTPLGWSQVDTLREHVTKSGLA 266
           KD  A  S+ ++D  + P GW+ + TLRE    +GLA
Sbjct: 234 KDLGA--SYVMVD--IVPAGWTAIQTLREEAEDAGLA 266

>Y1541_METJA (Q58936) Hypothetical protein MJ1541|
          Length = 420

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 293 GNNNQLNLFCQSRFCHMLSQGINLAP 216
           G+NN LNLF + +   +L +G+NL P
Sbjct: 295 GSNNNLNLFEEIKVSAILHKGVNLNP 320

>TRMD_TREPA (O83878) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)|
           (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
          Length = 250

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = +1

Query: 49  PQKWRPALAQLCTLRTDAKPYTWSGMPRVFTTWKARRILQRTSHMRCLMLSLPLWAGAKL 228
           PQ  RP     C    D  P   SG      TW+  R +++T   R  +LS    + A  
Sbjct: 175 PQYTRPR----CFHNRDVPPVLLSGHHAHIRTWRLARQIEKTRRNRPDLLSAARASAAWT 230

Query: 229 IPCESM*QNLDWQ 267
              ES+ + LD++
Sbjct: 231 QEAESLLKELDYE 243

>IPMK_RAT (Q99NI4) Inositol polyphosphate multikinase (EC 2.7.1.151)|
           (Inositol 1,3,4,6-tetrakisphosphate 5-kinase)
          Length = 396

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -2

Query: 252 LSHALAGYQLGSSPKG*AEHQAAHVTCTLQNPSRLPR 142
           LSH +AG+  G    G  +H    V   LQ P R PR
Sbjct: 32  LSHQVAGHMYGKDKVGILQHPDGTVLKQLQPPPRGPR 68

>IPMK_MOUSE (Q7TT16) Inositol polyphosphate multikinase (EC 2.7.1.151)|
           (Inositol 1,3,4,6-tetrakisphosphate 5-kinase)
          Length = 396

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -2

Query: 252 LSHALAGYQLGSSPKG*AEHQAAHVTCTLQNPSRLPR 142
           LSH +AG+  G    G  +H    V   LQ P R PR
Sbjct: 32  LSHQVAGHMYGKDKVGILQHPDGTVLKQLQPPPRGPR 68

>IPMK_HUMAN (Q8NFU5) Inositol polyphosphate multikinase (EC 2.7.1.151)|
           (Inositol 1,3,4,6-tetrakisphosphate 5-kinase)
          Length = 416

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -2

Query: 252 LSHALAGYQLGSSPKG*AEHQAAHVTCTLQNPSRLPR 142
           LSH +AG+  G    G  +H    V   LQ P R PR
Sbjct: 49  LSHQVAGHMYGKDKVGILQHPDGTVLKQLQPPPRGPR 85

>EZH1_MOUSE (P70351) Enhancer of zeste homolog 1 (ENX-2)|
          Length = 747

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 52  QKWRPALAQLCTLRTDAKPYTWSG 123
           QK  PA AQLC +   ++P  W+G
Sbjct: 413 QKASPAPAQLCVVEAPSEPVEWTG 436

>MAD1_SCHPO (P87169) Spindle assembly checkpoint component mad1 (Mitotic arrest|
           deficient protein 1)
          Length = 689

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +3

Query: 135 IHNVEGEKDFAAYKSHALLDAQLTPLGWSQVDTLREHVTKS--GLAKKIELVVVS 293
           I  V  EK+    K H LLDA+     W ++  L+  + K+   L++K   V+VS
Sbjct: 121 IEEVRNEKEATQVKIHELLDAK-----WKEIAELKTQIEKNDQALSEKNHEVMVS 170

>P3F2A_XENLA (P31365) POU domain, class 3, transcription factor 2-A|
           (Transcription factor POU3-A) (XLPOU3)
          Length = 382

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = -2

Query: 183 HVTCTLQNPSRLPRCEYPGHA---*PGIWFCIGA 91
           HV+ TLQ+ SR P   +P H     PG W   G+
Sbjct: 92  HVSGTLQHQSRAPHLVHPAHGNHHGPGAWRSTGS 125

>CASR_RAT (P48442) Extracellular calcium-sensing receptor precursor (CaSR)|
           (Parathyroid Cell calcium-sensing receptor)
          Length = 1079

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/48 (33%), Positives = 19/48 (39%)
 Frame = +2

Query: 110 IPGQACPGYSQRGRREGFCSVQVTCAA*CSAYPFGLEPS*YPARACDK 253
           +P   C    Q G R+G    + TC   C   P G       A ACDK
Sbjct: 537 VPFSNCSRDCQAGTRKGIIEGEPTCCFECVECPDGEYSGETDASACDK 584

>CASR_MOUSE (Q9QY96) Extracellular calcium-sensing receptor precursor (CaSR)|
           (Parathyroid Cell calcium-sensing receptor)
          Length = 1079

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/48 (33%), Positives = 19/48 (39%)
 Frame = +2

Query: 110 IPGQACPGYSQRGRREGFCSVQVTCAA*CSAYPFGLEPS*YPARACDK 253
           +P   C    Q G R+G    + TC   C   P G       A ACDK
Sbjct: 537 VPFSNCSRDCQAGTRKGIIEGEPTCCFECVECPDGEYSGETDASACDK 584

>NR1D2_RAT (Q63504) Orphan nuclear receptor NR1D2 (Rev-erb-beta) (EAR4)|
          Length = 578

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 20/64 (31%), Positives = 26/64 (40%)
 Frame = +2

Query: 74  HSSVPCAPMQNHIPGQACPGYSQRGRREGFCSVQVTCAA*CSAYPFGLEPS*YPARACDK 253
           HS  PC+  Q H+ GQ    Y  R     + +    C +      F    S YP R CD+
Sbjct: 305 HSHFPCSESQQHLSGQ----YKGRNMMH-YPNGHTVCISNGHCVNFS---SAYPQRVCDR 356

Query: 254 IWTG 265
           I  G
Sbjct: 357 IPVG 360


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,424,563
Number of Sequences: 219361
Number of extensions: 845063
Number of successful extensions: 2243
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2242
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)