ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart52e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470955.1| Oryza sativa (japonica cultivar-group), predic... 105 8e-20
2gb|AY106961.1| Zea mays PCO078813 mRNA sequence 100 5e-18
3gb|AY106065.1| Zea mays PCO096468 mRNA sequence 86 7e-14
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 76 7e-11
5emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4,... 76 7e-11
6ref|NM_125842.2| Arabidopsis thaliana unknown protein AT5G64460 ... 50 0.004
7ref|NM_180935.1| Arabidopsis thaliana unknown protein AT5G64460 ... 50 0.004
8ref|NM_001037062.1| Arabidopsis thaliana unknown protein AT5G644... 50 0.004
9ref|NM_001037061.1| Arabidopsis thaliana unknown protein AT5G644... 50 0.004
10ref|NM_001037063.1| Arabidopsis thaliana unknown protein AT5G644... 50 0.004
11gb|BT000924.1| Arabidopsis thaliana clone C105117 putative ZW10 ... 50 0.004
12gb|AY035144.1| Arabidopsis thaliana At5g64460 mRNA sequence 50 0.004
13ref|NM_104608.2| Arabidopsis thaliana unknown protein AT1G58280 ... 44 0.25
14ref|NM_179495.1| Arabidopsis thaliana catalytic AT1G58280 transc... 44 0.25
15gb|AC154379.2| Mus musculus BAC clone RP23-52B1 from chromosome ... 44 0.25
16ref|NM_001014678.1| Drosophila melanogaster Darkener of apricot ... 44 0.25
17gb|AC006170.11|AC006170 Drosophila melanogaster, chromosome 3R, ... 44 0.25
18gb|AC007854.4|AC007854 Drosophila melanogaster, chromosome 3R, r... 44 0.25
19gb|BT024208.1| Drosophila melanogaster RE41602 full insert cDNA 44 0.25
20dbj|AB028195.1| Arabidopsis thaliana ZW10 mRNA, partial cds 44 0.25
21gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 10... 44 0.25
22emb|AL031984.13|HS173D1 Human DNA sequence from clone RP1-173D1 ... 42 0.99
23gb|AC134662.11| Mus musculus chromosome 15, clone RP24-445D14, c... 40 3.9
24ref|XM_630546.1| Dictyostelium discoideum hypothetical protein (... 40 3.9
25ref|XM_483613.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.9
26gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.9
27gb|AC140799.6| Mus musculus chromosome 15, clone RP24-147N23, co... 40 3.9
28gb|AC153529.7| Mus musculus 10 BAC RP23-239G23 (Roswell Park Can... 40 3.9
29emb|AL121827.34|HSA261N11 Human DNA sequence from clone RP11-261... 40 3.9
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
32dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
33dbj|AK109237.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.9
34gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 3.9
35gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 3.9
36gb|U63930.1|CFU63930 Choristoneura fumiferana hormone receptor 7... 40 3.9 
>ref|XM_470955.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 828

 Score =  105 bits (53), Expect = 8e-20
 Identities = 65/69 (94%)
 Strand = Plus / Plus

                                                                       
Query: 93  caccgatgcaaaaccatatacctggtcaggcatgcccagggtattcacaacgtggaaggc 152
           ||||| ||||||||||| |||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 40  caccgctgcaaaaccatctacctggtcaggcatgcccagggtgttcacaatgtggaaggc 99

                    
Query: 153 gagaaggat 161
           |||||||||
Sbjct: 100 gagaaggat 108



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                       
Query: 201 cttacccctttgggctggagccaagttgataccctgcgagagcatgtgacaaaatctgga 260
           ||||| || |||||||||| |||||||||   |||||| ||||| |||| ||||  ||||
Sbjct: 148 cttactccattgggctggaaccaagttgactgcctgcgtgagcacgtgaaaaaaagtgga 207

                                                 
Query: 261 ctggcaaaaaagattgagttggttgttgtttcccctct 298
           || ||| ||||||||||| ||||| ||  |||||||||
Sbjct: 208 cttgcacaaaagattgagctggttattacttcccctct 245
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>gb|AY106961.1| Zea mays PCO078813 mRNA sequence
          Length = 1308

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 113/134 (84%)
 Strand = Plus / Plus

                                                                       
Query: 116 ggtcaggcatgcccagggtattcacaacgtggaaggcgagaaggattttgcagcgtacaa 175
           |||||||||||||||||| ||||||||||| | |||||||||||| || |  || |||| 
Sbjct: 214 ggtcaggcatgcccagggcattcacaacgtcgcaggcgagaaggacttcggcgcctacat 273

                                                                       
Query: 176 gtcacatgcgctgcttgatgctcagcttacccctttgggctggagccaagttgataccct 235
           ||||||||  ||| | ||||||||||| ||||||||||| |||| |||||| |||   ||
Sbjct: 274 gtcacatgaactgttcgatgctcagctcacccctttgggttggaaccaagtcgatggtct 333

                         
Query: 236 gcgagagcatgtga 249
           ||| ||||||||||
Sbjct: 334 gcgggagcatgtga 347



 Score = 42.1 bits (21), Expect = 0.99
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 81  ctgtaccctgcgcaccgatgcaaaaccatatacctgg 117
           |||||||||  |||||| ||||||||||| |||||||
Sbjct: 153 ctgtaccctctgcaccgctgcaaaaccatttacctgg 189
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>gb|AY106065.1| Zea mays PCO096468 mRNA sequence
          Length = 1347

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                       
Query: 92  gcaccgatgcaaaaccatatacctggtcaggcatgcccagggtattcacaacgtggaagg 151
           ||||||||||||||||||| ||||||| ||||||||||| ||| | ||||||||||||||
Sbjct: 205 gcaccgatgcaaaaccatacacctggtgaggcatgcccaaggtgtccacaacgtggaagg 264

              
Query: 152 cga 154
           |||
Sbjct: 265 cga 267



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                       
Query: 210 ttgggctggagccaagttgataccctgcgagagcatgtgacaaaatctggactggcaaaa 269
           |||||||||| ||| |||||   |||||||||||||||||   ||||||| || ||| ||
Sbjct: 323 ttgggctggaaccaggttgacctcctgcgagagcatgtgaaggaatctgggcttgcagaa 382

                          
Query: 270 aagattgagttggtt 284
           ||||||||| |||||
Sbjct: 383 aagattgagctggtt 397
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                            
Query: 116    ggtcaggcatgcccagggtattcacaacgtggaaggcgagaaggat 161
              ||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 168589 ggtcaggcatgcccagggtgttcacaatgtggaaggcgagaaggat 168634



 Score = 44.1 bits (22), Expect = 0.25
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                          
Query: 233    cctgcgagagcatgtgacaaaatctggactggcaaaaaagattgagttggttgttgtttc 292
              |||||| ||||| |||| ||||  |||||| ||| ||||||||||| ||||| ||  |||
Sbjct: 169670 cctgcgtgagcacgtgaaaaaaagtggacttgcacaaaagattgagctggttattacttc 169729

                    
Query: 293    ccctct 298
              ||||||
Sbjct: 169730 ccctct 169735
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>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06,
             complete sequence
          Length = 145517

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                           
Query: 116   ggtcaggcatgcccagggtattcacaacgtggaaggcgagaaggat 161
             ||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 99876 ggtcaggcatgcccagggtgttcacaatgtggaaggcgagaaggat 99921



 Score = 44.1 bits (22), Expect = 0.25
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                          
Query: 233    cctgcgagagcatgtgacaaaatctggactggcaaaaaagattgagttggttgttgtttc 292
              |||||| ||||| |||| ||||  |||||| ||| ||||||||||| ||||| ||  |||
Sbjct: 100957 cctgcgtgagcacgtgaaaaaaagtggacttgcacaaaagattgagctggttattacttc 101016

                    
Query: 293    ccctct 298
              ||||||
Sbjct: 101017 ccctct 101022
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>ref|NM_125842.2| Arabidopsis thaliana unknown protein AT5G64460 transcript variant
           AT5G64460.2 mRNA, complete cds
          Length = 1032

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  tgtaccctgcgcaccgatgcaaaaccatatacctggtcaggcatgcccagggtattcaca 141
           ||||||||  ||| || ||||||||||| ||||| || || ||||| ||||| |||||||
Sbjct: 90  tgtaccctttgcatcgctgcaaaaccatttacctagtgagacatgctcaggggattcaca 149

                            
Query: 142 acgtggaaggcgagaag 158
           | ||||| || ||||||
Sbjct: 150 atgtggatggggagaag 166
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>ref|NM_180935.1| Arabidopsis thaliana unknown protein AT5G64460 transcript variant
           AT5G64460.1 mRNA, complete cds
          Length = 1056

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  tgtaccctgcgcaccgatgcaaaaccatatacctggtcaggcatgcccagggtattcaca 141
           ||||||||  ||| || ||||||||||| ||||| || || ||||| ||||| |||||||
Sbjct: 114 tgtaccctttgcatcgctgcaaaaccatttacctagtgagacatgctcaggggattcaca 173

                            
Query: 142 acgtggaaggcgagaag 158
           | ||||| || ||||||
Sbjct: 174 atgtggatggggagaag 190
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>ref|NM_001037062.1| Arabidopsis thaliana unknown protein AT5G64460 transcript variant
           AT5G64460.4 mRNA, complete cds
          Length = 1046

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  tgtaccctgcgcaccgatgcaaaaccatatacctggtcaggcatgcccagggtattcaca 141
           ||||||||  ||| || ||||||||||| ||||| || || ||||| ||||| |||||||
Sbjct: 63  tgtaccctttgcatcgctgcaaaaccatttacctagtgagacatgctcaggggattcaca 122

                            
Query: 142 acgtggaaggcgagaag 158
           | ||||| || ||||||
Sbjct: 123 atgtggatggggagaag 139
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>ref|NM_001037061.1| Arabidopsis thaliana unknown protein AT5G64460 transcript variant
           AT5G64460.3 mRNA, complete cds
          Length = 1071

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  tgtaccctgcgcaccgatgcaaaaccatatacctggtcaggcatgcccagggtattcaca 141
           ||||||||  ||| || ||||||||||| ||||| || || ||||| ||||| |||||||
Sbjct: 88  tgtaccctttgcatcgctgcaaaaccatttacctagtgagacatgctcaggggattcaca 147

                            
Query: 142 acgtggaaggcgagaag 158
           | ||||| || ||||||
Sbjct: 148 atgtggatggggagaag 164
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>ref|NM_001037063.1| Arabidopsis thaliana unknown protein AT5G64460 transcript variant
           AT5G64460.5 mRNA, complete cds
          Length = 1146

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  tgtaccctgcgcaccgatgcaaaaccatatacctggtcaggcatgcccagggtattcaca 141
           ||||||||  ||| || ||||||||||| ||||| || || ||||| ||||| |||||||
Sbjct: 90  tgtaccctttgcatcgctgcaaaaccatttacctagtgagacatgctcaggggattcaca 149

                            
Query: 142 acgtggaaggcgagaag 158
           | ||||| || ||||||
Sbjct: 150 atgtggatggggagaag 166
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>gb|BT000924.1| Arabidopsis thaliana clone C105117 putative ZW10 protein
           (At5g64460) mRNA, complete cds
          Length = 880

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  tgtaccctgcgcaccgatgcaaaaccatatacctggtcaggcatgcccagggtattcaca 141
           ||||||||  ||| || ||||||||||| ||||| || || ||||| ||||| |||||||
Sbjct: 26  tgtaccctttgcatcgctgcaaaaccatttacctagtgagacatgctcaggggattcaca 85

                            
Query: 142 acgtggaaggcgagaag 158
           | ||||| || ||||||
Sbjct: 86  atgtggatggggagaag 102
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>gb|AY035144.1| Arabidopsis thaliana At5g64460 mRNA sequence
          Length = 1021

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 82  tgtaccctgcgcaccgatgcaaaaccatatacctggtcaggcatgcccagggtattcaca 141
           ||||||||  ||| || ||||||||||| ||||| || || ||||| ||||| |||||||
Sbjct: 114 tgtaccctttgcatcgctgcaaaaccatttacctagtgagacatgctcaggggattcaca 173

                            
Query: 142 acgtggaaggcgagaag 158
           | ||||| || ||||||
Sbjct: 174 atgtggatggggagaag 190
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>ref|NM_104608.2| Arabidopsis thaliana unknown protein AT1G58280 transcript variant
           AT1G58280.1 mRNA, complete cds
          Length = 1068

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 93  caccgatgcaaaaccatatacctggtcaggcatgcccagggtattcacaacgtggaaggc 152
           ||||| |||||||||||| | ||||| || ||||| || || |||||||| || ||||| 
Sbjct: 108 caccgttgcaaaaccatacatctggtgagacatgctcaagggattcacaatgttgaagga 167

                 
Query: 153 gagaag 158
           ||||||
Sbjct: 168 gagaag 173
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>ref|NM_179495.1| Arabidopsis thaliana catalytic AT1G58280 transcript variant
           AT1G58280.2 mRNA, complete cds
          Length = 1183

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 93  caccgatgcaaaaccatatacctggtcaggcatgcccagggtattcacaacgtggaaggc 152
           ||||| |||||||||||| | ||||| || ||||| || || |||||||| || ||||| 
Sbjct: 148 caccgttgcaaaaccatacatctggtgagacatgctcaagggattcacaatgttgaagga 207

                 
Query: 153 gagaag 158
           ||||||
Sbjct: 208 gagaag 213
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>gb|AC154379.2| Mus musculus BAC clone RP23-52B1 from chromosome 17, complete sequence
          Length = 234939

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 41    ctccttgtcctcagaaatggag 62
             ||||||||||||||||||||||
Sbjct: 99287 ctccttgtcctcagaaatggag 99308
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>ref|NM_001014678.1| Drosophila melanogaster Darkener of apricot CG33553-RE, transcript
            variant E (Doa), mRNA
          Length = 4316

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 182  tgcgctgcttgatgctcagctt 203
            ||||||||||||||||||||||
Sbjct: 1184 tgcgctgcttgatgctcagctt 1163
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>gb|AC006170.11|AC006170 Drosophila melanogaster, chromosome 3R, region 98E2-98F2, BAC clone
              BACR48K07, complete sequence
          Length = 168471

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 182    tgcgctgcttgatgctcagctt 203
              ||||||||||||||||||||||
Sbjct: 109978 tgcgctgcttgatgctcagctt 109957
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>gb|AC007854.4|AC007854 Drosophila melanogaster, chromosome 3R, region 98F-98F, BAC clone
             BACR13H19, complete sequence
          Length = 155666

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 182   tgcgctgcttgatgctcagctt 203
             ||||||||||||||||||||||
Sbjct: 45809 tgcgctgcttgatgctcagctt 45788
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>gb|BT024208.1| Drosophila melanogaster RE41602 full insert cDNA
          Length = 4337

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 182  tgcgctgcttgatgctcagctt 203
            ||||||||||||||||||||||
Sbjct: 1184 tgcgctgcttgatgctcagctt 1163
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>dbj|AB028195.1| Arabidopsis thaliana ZW10 mRNA, partial cds
          Length = 1066

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 93  caccgatgcaaaaccatatacctggtcaggcatgcccagggtattcacaacgtggaaggc 152
           ||||| |||||||||||| | ||||| || ||||| || || |||||||| || ||||| 
Sbjct: 108 caccgttgcaaaaccatacatctggtgagacatgctcaagggattcacaatgttgaagga 167

                 
Query: 153 gagaag 158
           ||||||
Sbjct: 168 gagaag 173
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>gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 105 of 118 of the
             complete sequence
          Length = 231562

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 182   tgcgctgcttgatgctcagctt 203
             ||||||||||||||||||||||
Sbjct: 93079 tgcgctgcttgatgctcagctt 93058
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>emb|AL031984.13|HS173D1 Human DNA sequence from clone RP1-173D1 on chromosome 1p36.21-36.33
             Contains the 5' UTR of the gene for a novel protein
             (FLJ34970, FLJ20321) and a CpG island, complete sequence
          Length = 117338

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   cttacccctttgggctggagc 221
             |||||||||||||||||||||
Sbjct: 72118 cttacccctttgggctggagc 72098
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>gb|AC134662.11| Mus musculus chromosome 15, clone RP24-445D14, complete sequence
          Length = 177038

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 259  gactggcaaaaaagattgag 278
            ||||||||||||||||||||
Sbjct: 5144 gactggcaaaaaagattgag 5163
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>ref|XM_630546.1| Dictyostelium discoideum hypothetical protein (DDB0188942), partial
           mRNA
          Length = 1398

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 aagattgagttggttgttgt 289
           ||||||||||||||||||||
Sbjct: 100 aagattgagttggttgttgt 81
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>ref|XM_483613.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 592

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 2   tcgccgtcgccgccgcgctt 21
           ||||||||||||||||||||
Sbjct: 214 tcgccgtcgccgccgcgctt 195
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>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21,
              complete sequence
          Length = 135750

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      gtcgccgtcgccgccgcgct 20
              ||||||||||||||||||||
Sbjct: 115327 gtcgccgtcgccgccgcgct 115346
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>gb|AC140799.6| Mus musculus chromosome 15, clone RP24-147N23, complete sequence
          Length = 162329

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    gactggcaaaaaagattgag 278
              ||||||||||||||||||||
Sbjct: 158868 gactggcaaaaaagattgag 158887
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>gb|AC153529.7| Mus musculus 10 BAC RP23-239G23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 153084

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   aaaagattgagttggttgtt 287
             ||||||||||||||||||||
Sbjct: 42709 aaaagattgagttggttgtt 42728
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>emb|AL121827.34|HSA261N11 Human DNA sequence from clone RP11-261N11 on chromosome 20, complete
             sequence
          Length = 184223

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    gaggccagcgctggcacagc 79
             ||||||||||||||||||||
Sbjct: 61514 gaggccagcgctggcacagc 61495
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 2        tcgccgtcgccgccgcgctt 21
                ||||||||||||||||||||
Sbjct: 27285420 tcgccgtcgccgccgcgctt 27285401
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 1        gtcgccgtcgccgccgcgct 20
                ||||||||||||||||||||
Sbjct: 21862918 gtcgccgtcgccgccgcgct 21862937
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>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0623F08
          Length = 154540

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      tcgccgtcgccgccgcgctt 21
              ||||||||||||||||||||
Sbjct: 108623 tcgccgtcgccgccgcgctt 108604
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>dbj|AK109237.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-F09, full
           insert sequence
          Length = 592

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 2   tcgccgtcgccgccgcgctt 21
           ||||||||||||||||||||
Sbjct: 214 tcgccgtcgccgccgcgctt 195
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       gtcgccgtcgccgccgcgct 20
               ||||||||||||||||||||
Sbjct: 1142224 gtcgccgtcgccgccgcgct 1142205
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 1       gtcgccgtcgccgccgcgct 20
               ||||||||||||||||||||
Sbjct: 1465708 gtcgccgtcgccgccgcgct 1465727
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>gb|U63930.1|CFU63930 Choristoneura fumiferana hormone receptor 75 mRNA, complete cds
          Length = 2797

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    gtcgccgtcgccgccgcgct 20
            ||||||||||||||||||||
Sbjct: 2399 gtcgccgtcgccgccgcgct 2418


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,732,618
Number of Sequences: 3902068
Number of extensions: 2732618
Number of successful extensions: 65827
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65408
Number of HSP's gapped (non-prelim): 419
length of query: 298
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 276
effective length of database: 17,147,199,772
effective search space: 4732627137072
effective search space used: 4732627137072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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