Clone Name | bart52e04 |
---|---|
Clone Library Name | barley_pub |
>PPA1_LYCES (P27061) Acid phosphatase 1 precursor (EC 3.1.3.2) (Apase-1(1))| Length = 255 Score = 80.5 bits (197), Expect = 2e-15 Identities = 34/77 (44%), Positives = 49/77 (63%) Frame = +1 Query: 226 CDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDSKVVIDQALAYVDSLKLAGNG 405 C +W VE +N+ WKT+P C YV YM+G ++ + V D+A Y S+ L +G Sbjct: 43 CTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEYAKSVDLGDDG 102 Query: 406 KEVWVFDIDETTLSNLP 456 ++VW+FD+DET LSNLP Sbjct: 103 RDVWIFDVDETLLSNLP 119
>VSP2_ARATH (O82122) Vegetative storage protein 2 precursor| Length = 265 Score = 74.3 bits (181), Expect = 1e-13 Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Frame = +1 Query: 226 CDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGS-HFRRDSKVVIDQALAYVDSLKLAGN 402 C SW LGVE N+ D+ TVPA+C+ YV Y++ S ++ DSK V +A Y L L + Sbjct: 52 CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALKND 111 Query: 403 GKEVWVFDIDETTLSNLP 456 VW+FD+D+T LS++P Sbjct: 112 TVNVWIFDLDDTLLSSIP 129
>VSP1_ARATH (O49195) Vegetative storage protein 1 precursor| Length = 270 Score = 71.6 bits (174), Expect = 9e-13 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Frame = +1 Query: 226 CDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGS-HFRRDSKVVIDQALAYVDSLKLAGN 402 C SW LGVE N+ ++ TVPA+C+ YV Y++ S ++ DSK V +A Y L L + Sbjct: 57 CRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKND 116 Query: 403 GKEVWVFDIDETTLSNLP 456 VW+FD+D+T LS++P Sbjct: 117 TINVWIFDLDDTLLSSIP 134
>VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein B) Length = 254 Score = 67.8 bits (164), Expect = 1e-11 Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 1/92 (1%) Frame = +1 Query: 184 LRPLLGSGKHAG-VACDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDSKVVID 360 LR G G+ + V C S+ L VEAHN+R +KT+P C Y+ G FR DSK V Sbjct: 28 LRMKTGYGERSSEVKCASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQ 87 Query: 361 QALAYVDSLKLAGNGKEVWVFDIDETTLSNLP 456 QA Y ++ N ++++F ID T LSN+P Sbjct: 88 QAFFYASEREVHHN--DIFIFGIDNTVLSNIP 117
>S25K_SOYBN (P10742) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein VSP25) (Fragment) Length = 291 Score = 66.2 bits (160), Expect = 4e-11 Identities = 34/79 (43%), Positives = 46/79 (58%) Frame = +1 Query: 220 VACDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDSKVVIDQALAYVDSLKLAG 399 V C SW L VEAHN+ ++T+P C Y+ G +R DSK V QA Y L++ Sbjct: 37 VKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV-- 94 Query: 400 NGKEVWVFDIDETTLSNLP 456 + K+ +VF ID T LSN+P Sbjct: 95 HPKDTFVFSIDGTVLSNIP 113
>VSPA_SOYBN (P15490) Stem 28 kDa glycoprotein precursor (Vegetative storage| protein A) Length = 254 Score = 66.2 bits (160), Expect = 4e-11 Identities = 34/79 (43%), Positives = 46/79 (58%) Frame = +1 Query: 220 VACDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDSKVVIDQALAYVDSLKLAG 399 V C SW L VEAHN+ ++T+P C Y+ G +R DSK V QA Y L++ Sbjct: 40 VKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV-- 97 Query: 400 NGKEVWVFDIDETTLSNLP 456 + K+ +VF ID T LSN+P Sbjct: 98 HPKDTFVFSIDGTVLSNIP 116
>CYF_PSINU (Q8WI07) Apocytochrome f precursor| Length = 321 Score = 33.9 bits (76), Expect = 0.20 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%) Frame = +1 Query: 115 VNIRMPTSAAD--VDEAVVA-PLIHALRPLLGSGKHAGVACDSWVLGVEAHNVRDWKTVP 285 V+I +P S V EAVV P ++ +LG+GK G+ + ++ E + + +P Sbjct: 66 VDIEVPQSVFPNTVFEAVVKIPYDKQIKQVLGNGKKGGINVGAVLILPEGFELAPYNRIP 125 Query: 286 ASCEGYVGHYMLGSHFRRDSKVVI 357 A + +G L ++R D + +I Sbjct: 126 AEMKDKIGDLALFQNYRPDKRNII 149
>MMPL8_MYCTU (O07800) Putative membrane protein mmpL8| Length = 1089 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = +1 Query: 244 GVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDSKVVIDQALAYVDSLKL 393 G+ +N D KT+PAS E +G+ L HF S ++I + L S L Sbjct: 418 GLARYNYDDRKTLPASVESSIGYAALDKHF--PSNLIIPEYLFIQSSTDL 465
>RPOB_GRATL (Q6B8R8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1120 Score = 30.0 bits (66), Expect = 2.9 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = +1 Query: 169 PLIHALRPLLGSGKHAGVACDSWVLGVEAHN-----VRDWKTVPASCEGYVGHYMLGSHF 333 PL+ + ++G+G A +A DS + + N V K + EGY HY L ++ Sbjct: 591 PLLFPEKSIVGTGLEAKIAKDSGMTIISRTNGTVSYVSGTKIGIQNKEGYTIHYRLKKYY 650 Query: 334 RRDSKVVIDQ 363 R + I+Q Sbjct: 651 RSNQDTCINQ 660
>RPOB_CYACA (Q9TM35) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1081 Score = 29.3 bits (64), Expect = 5.0 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 169 PLIHALRPLLGSGKHAGVACDSWVLGVEAHN 261 PLI RPL+G+G A +A DS ++ + N Sbjct: 552 PLIFPERPLVGTGLEAQIAKDSGIMAISRSN 582
>PLB3_CANAL (Q9UVX1) Lysophospholipase 3 precursor (EC 3.1.1.5) (Phospholipase| B 3) Length = 754 Score = 28.9 bits (63), Expect = 6.6 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Frame = +1 Query: 178 HALRPLLGSGKHA-GVACDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDSKVV 354 H L LL S + G++ +W++G A N DW +V G + L S + Sbjct: 209 HGLGGLLDSSTYVVGLSGGNWLVGSLALN--DWLSVGDIVNGKSTIWQLQDSILNPSGMR 266 Query: 355 IDQALAYVDSLKLAGNGKE 411 ID+ +AY L A KE Sbjct: 267 IDKTIAYYYGLAQAVQAKE 285
>THII_PSEPK (Q88CY4) Thiamine biosynthesis protein thiI| Length = 484 Score = 28.5 bits (62), Expect = 8.6 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +1 Query: 241 LGVEAHNVRDWKTVPASCEGYVGHYMLGSHF 333 L VE + + D+ + A C+ + GH + G HF Sbjct: 79 LQVEEYPLGDFDDIVAKCKHHFGHLLAGKHF 109 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.130 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,164,644 Number of Sequences: 219361 Number of extensions: 811427 Number of successful extensions: 3029 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2921 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3017 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)