ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart52d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 52 3e-04
2dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic D... 52 3e-04
3dbj|AK101821.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 3e-04
4dbj|AK100247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 3e-04
5gb|U55873.1|OSU55873 Oryza sativa asparagine synthetase mRNA, co... 52 3e-04
6dbj|D83378.1|RICAS Oryza sativa (japonica cultivar-group) mRNA f... 52 3e-04
7dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.069
8gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 42 0.27
9ref|XM_957061.1| Neurospora crassa OR74A hypothetical protein (N... 40 1.1
10gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genom... 40 1.1
11ref|XM_327585.1| Neurospora crassa OR74A hypothetical protein (N... 40 1.1
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 1.1
13gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome... 40 1.1
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.1
15dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 1.1
16dbj|AK100408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.1
17dbj|AK067797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.1
18ref|XM_465743.1| Oryza sativa (japonica cultivar-group), mRNA 38 4.3
19ref|NM_191299.1| Oryza sativa (japonica cultivar-group), predic... 38 4.3
20ref|XM_469427.1| Oryza sativa (japonica cultivar-group), mRNA 38 4.3
21ref|XM_472195.1| Oryza sativa (japonica cultivar-group), predic... 38 4.3
22gb|AC145323.3| Oryza sativa (japonica cultivar-group) chromosome... 38 4.3
23gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome... 38 4.3
24gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 38 4.3
25gb|AY224532.1| Oryza sativa (japonica cultivar-group) isolate 22... 38 4.3
26gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genom... 38 4.3
27gb|AY232125.1| Drosophila yakuba clone yak-ad_CG9894 mRNA sequence 38 4.3
28gb|AY231858.1| Drosophila yakuba clone yak-em_CG9894 mRNA sequence 38 4.3
29gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 38 4.3
30emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome... 38 4.3
31emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 38 4.3
32emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 38 4.3
33emb|AJ632203.2| Streptomyces antibioticus oviedomycin biosynthet... 38 4.3
34gb|AY071349.1| Drosophila melanogaster RE38782 full insert cDNA 38 4.3
35ref|NM_164498.1| Drosophila melanogaster CG9894-RA, transcript v... 38 4.3
36ref|NM_134862.2| Drosophila melanogaster CG9894-RB, transcript v... 38 4.3
37gb|AC009392.6| Drosophila melanogaster, chromosome 2L, region 23... 38 4.3
38dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.3
39dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.3
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.3
41dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.3
42dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic D... 38 4.3
43gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 38 4.3
44dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic D... 38 4.3
45dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic D... 38 4.3
46dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.3
47dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.3
48dbj|AK121682.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.3
49dbj|AK119905.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.3
50dbj|AK105398.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.3
51dbj|AK105149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.3
52dbj|AK101933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.3
53dbj|AK063307.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.3
54gb|AE003582.4| Drosophila melanogaster chromosome 2L, section 9 ... 38 4.3
55emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 38 4.3
56gb|AC005558.1|AC005558 Drosophila melanogaster DNA sequence (P1s... 38 4.3
57gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 4.3
58emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4,... 38 4.3
59gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipie... 38 4.3 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 61      accatgtgcggcatcctcgccgtcctcggcgtcg 94
               |||||||| |||||||||||||| ||||||||||
Sbjct: 8776379 accatgtgtggcatcctcgccgtgctcggcgtcg 8776346
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>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1001_B06
          Length = 134810

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 61    accatgtgcggcatcctcgccgtcctcggcgtcg 94
             |||||||| |||||||||||||| ||||||||||
Sbjct: 46700 accatgtgtggcatcctcgccgtgctcggcgtcg 46667
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>dbj|AK101821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067G13, full
           insert sequence
          Length = 2879

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 61  accatgtgcggcatcctcgccgtcctcggcgtcg 94
           |||||||| |||||||||||||| ||||||||||
Sbjct: 144 accatgtgtggcatcctcgccgtgctcggcgtcg 177
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>dbj|AK100247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058E10, full
           insert sequence
          Length = 2265

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 61  accatgtgcggcatcctcgccgtcctcggcgtcg 94
           |||||||| |||||||||||||| ||||||||||
Sbjct: 120 accatgtgtggcatcctcgccgtgctcggcgtcg 153
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>gb|U55873.1|OSU55873 Oryza sativa asparagine synthetase mRNA, complete cds
          Length = 2172

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 61  accatgtgcggcatcctcgccgtcctcggcgtcg 94
           |||||||| |||||||||||||| ||||||||||
Sbjct: 131 accatgtgtggcatcctcgccgtgctcggcgtcg 164
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>dbj|D83378.1|RICAS Oryza sativa (japonica cultivar-group) mRNA for asparagine
           synthetase, complete cds
          Length = 2141

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 61  accatgtgcggcatcctcgccgtcctcggcgtcg 94
           |||||||| |||||||||||||| ||||||||||
Sbjct: 131 accatgtgtggcatcctcgccgtgctcggcgtcg 164
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.069
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 68      gcggcatcctcgccgtcctcggcgtc 93
               ||||| ||||||||||||||||||||
Sbjct: 7615209 gcggcgtcctcgccgtcctcggcgtc 7615184



 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 75      cctcgccgtcctcggcgtcggcg 97
               ||||| |||||||||||||||||
Sbjct: 4765186 cctcgacgtcctcggcgtcggcg 4765208
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 42.1 bits (21), Expect = 0.27
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 68     gcggcatcctcgccgtcctcggcgt 92
              |||||||||||||| ||||||||||
Sbjct: 668248 gcggcatcctcgccatcctcggcgt 668272



 Score = 40.1 bits (20), Expect = 1.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 67     tgcggcatcctcgccgtcctcggcgtcg 94
              ||||||||| ||||| ||||||||||||
Sbjct: 244281 tgcggcatcgtcgccctcctcggcgtcg 244254
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>ref|XM_957061.1| Neurospora crassa OR74A hypothetical protein (NCU07300.1) partial
          mRNA
          Length = 1752

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 64 atgtgcggcatcctcgccgtcctc 87
          ||||||||||||| ||||||||||
Sbjct: 1  atgtgcggcatccacgccgtcctc 24
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>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete
             sequence
          Length = 130272

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    cctcgccgtcctcggcgtcg 94
             ||||||||||||||||||||
Sbjct: 30713 cctcgccgtcctcggcgtcg 30694
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>ref|XM_327585.1| Neurospora crassa OR74A hypothetical protein (NCU07300.1) partial
          mRNA
          Length = 1752

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 64 atgtgcggcatcctcgccgtcctc 87
          ||||||||||||| ||||||||||
Sbjct: 1  atgtgcggcatccacgccgtcctc 24
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 75       cctcgccgtcctcggcgtcg 94
                ||||||||||||||||||||
Sbjct: 35029812 cctcgccgtcctcggcgtcg 35029793



 Score = 40.1 bits (20), Expect = 1.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 52       ccggccgcaaccatgtgcggcatcctcgccgtcctcggcg 91
                |||| ||| ||||||||||| ||||| ||||| |||||||
Sbjct: 10096283 ccgggcgccaccatgtgcgggatcctggccgtgctcggcg 10096244
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>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0078C05, complete sequence
          Length = 122116

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 52    ccggccgcaaccatgtgcggcatcctcgccgtcctcggcg 91
             |||| ||| ||||||||||| ||||| ||||| |||||||
Sbjct: 41904 ccgggcgccaccatgtgcgggatcctggccgtgctcggcg 41865
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 75       cctcgccgtcctcggcgtcg 94
                ||||||||||||||||||||
Sbjct: 35119884 cctcgccgtcctcggcgtcg 35119865



 Score = 40.1 bits (20), Expect = 1.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 52       ccggccgcaaccatgtgcggcatcctcgccgtcctcggcg 91
                |||| ||| ||||||||||| ||||| ||||| |||||||
Sbjct: 10094404 ccgggcgccaccatgtgcgggatcctggccgtgctcggcg 10094365



 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 70       ggcatcctcgccgtcctcg 88
                |||||||||||||||||||
Sbjct: 27994607 ggcatcctcgccgtcctcg 27994625
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 74      tcctcgccgtcctcggcgtcggcg 97
               ||||||||||||||| ||||||||
Sbjct: 1211378 tcctcgccgtcctcgtcgtcggcg 1211401
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>dbj|AK100408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087F22, full
            insert sequence
          Length = 2287

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   cctcgccgtcctcggcgtcg 94
            ||||||||||||||||||||
Sbjct: 1579 cctcgccgtcctcggcgtcg 1560
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>dbj|AK067797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D11, full
            insert sequence
          Length = 2307

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   cctcgccgtcctcggcgtcg 94
            ||||||||||||||||||||
Sbjct: 1606 cctcgccgtcctcggcgtcg 1587
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>ref|XM_465743.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1162

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 75  cctcgccgtcctcggcgtcggcg 97
           |||||||||||||||| ||||||
Sbjct: 386 cctcgccgtcctcggcttcggcg 408
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>ref|NM_191299.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1083

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 74  tcctcgccgtcctcggcgtcggc 96
           |||||||||||||||||| ||||
Sbjct: 791 tcctcgccgtcctcggcgccggc 769
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>ref|XM_469427.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2319

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 70   ggcatcctcgccgtcctcg 88
            |||||||||||||||||||
Sbjct: 1716 ggcatcctcgccgtcctcg 1698
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>ref|XM_472195.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1683

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 75  cctcgccgtcctcggcgtcggcg 97
           ||||| |||||||||||||||||
Sbjct: 406 cctcgacgtcctcggcgtcggcg 384
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>gb|AC145323.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0018N12, complete sequence
          Length = 137127

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    ggcatcctcgccgtcctcg 88
             |||||||||||||||||||
Sbjct: 56951 ggcatcctcgccgtcctcg 56969
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>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08
             map R2847, complete sequence
          Length = 100918

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    ggcatcctcgccgtcctcg 88
             |||||||||||||||||||
Sbjct: 35445 ggcatcctcgccgtcctcg 35463
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 78      cgccgtcctcggcgtcggc 96
               |||||||||||||||||||
Sbjct: 2550536 cgccgtcctcggcgtcggc 2550554
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>gb|AY224532.1| Oryza sativa (japonica cultivar-group) isolate 22824 myosin heavy
           chain-like protein mRNA, partial cds
          Length = 1503

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 74  tcctcgccgtcctcggcgtcggc 96
           |||||||||||||||||| ||||
Sbjct: 911 tcctcgccgtcctcggcgccggc 889
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>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete
              sequence
          Length = 133889

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 70     ggcatcctcgccgtcctcg 88
              |||||||||||||||||||
Sbjct: 125309 ggcatcctcgccgtcctcg 125291
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>gb|AY232125.1| Drosophila yakuba clone yak-ad_CG9894 mRNA sequence
          Length = 429

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 68  gcggcatcctcgccgtcct 86
           |||||||||||||||||||
Sbjct: 158 gcggcatcctcgccgtcct 140
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>gb|AY231858.1| Drosophila yakuba clone yak-em_CG9894 mRNA sequence
          Length = 456

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 68  gcggcatcctcgccgtcct 86
           |||||||||||||||||||
Sbjct: 185 gcggcatcctcgccgtcct 167
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 79     gccgtcctcggcgtcggcg 97
              |||||||||||||||||||
Sbjct: 593803 gccgtcctcggcgtcggcg 593821
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>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13
          Length = 348247

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 78     cgccgtcctcggcgtcggc 96
              |||||||||||||||||||
Sbjct: 129851 cgccgtcctcggcgtcggc 129869
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>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             9/14
          Length = 306550

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 78    cgccgtcctcggcgtcggc 96
             |||||||||||||||||||
Sbjct: 21286 cgccgtcctcggcgtcggc 21304
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 75     cctcgccgtcctcggcgtc 93
              |||||||||||||||||||
Sbjct: 250861 cctcgccgtcctcggcgtc 250879
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>emb|AJ632203.2| Streptomyces antibioticus oviedomycin biosynthetic gene cluster, strain
             ATCC 11891
          Length = 24720

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 71    gcatcctcgccgtcctcggcgtcggcg 97
             ||||||||| || ||||||||||||||
Sbjct: 21849 gcatcctcgtcggcctcggcgtcggcg 21823
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>gb|AY071349.1| Drosophila melanogaster RE38782 full insert cDNA
          Length = 927

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 68  gcggcatcctcgccgtcct 86
           |||||||||||||||||||
Sbjct: 268 gcggcatcctcgccgtcct 250
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>ref|NM_164498.1| Drosophila melanogaster CG9894-RA, transcript variant A (CG9894),
           mRNA
          Length = 952

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 68  gcggcatcctcgccgtcct 86
           |||||||||||||||||||
Sbjct: 366 gcggcatcctcgccgtcct 348
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>ref|NM_134862.2| Drosophila melanogaster CG9894-RB, transcript variant B (CG9894),
           mRNA
          Length = 856

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 68  gcggcatcctcgccgtcct 86
           |||||||||||||||||||
Sbjct: 270 gcggcatcctcgccgtcct 252
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>gb|AC009392.6| Drosophila melanogaster, chromosome 2L, region 23A-23E, BAC clone
             BACR42J13, complete sequence
          Length = 179125

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 68    gcggcatcctcgccgtcct 86
             |||||||||||||||||||
Sbjct: 29440 gcggcatcctcgccgtcct 29422
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 75       cctcgccgtcctcggcgtcggcg 97
                ||||| |||||||||||||||||
Sbjct: 18389188 cctcgacgtcctcggcgtcggcg 18389166
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 70      ggcatcctcgccgtcctcg 88
               |||||||||||||||||||
Sbjct: 5100762 ggcatcctcgccgtcctcg 5100744
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 75       cctcgccgtcctcggcgtcggcg 97
                |||||||||||||||| ||||||
Sbjct: 17140143 cctcgccgtcctcggcttcggcg 17140165
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 74       tcctcgccgtcctcggcgtcggc 96
                |||||||||||||||||| ||||
Sbjct: 31809067 tcctcgccgtcctcggcgccggc 31809089



 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 70      ggcatcctcgccgtcctcg 88
               |||||||||||||||||||
Sbjct: 6940419 ggcatcctcgccgtcctcg 6940437
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>dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1414_E05
          Length = 105222

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 74    tcctcgccgtcctcggcgtcggc 96
             |||||||||||||||||| ||||
Sbjct: 87105 tcctcgccgtcctcggcgccggc 87127
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 75      cctcgccgtcctcggcgtc 93
               |||||||||||||||||||
Sbjct: 3739848 cctcgccgtcctcggcgtc 3739866
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>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0492F05
          Length = 159242

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 70     ggcatcctcgccgtcctcg 88
              |||||||||||||||||||
Sbjct: 108143 ggcatcctcgccgtcctcg 108161
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>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0443E07
          Length = 159440

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    ggcatcctcgccgtcctcg 88
             |||||||||||||||||||
Sbjct: 62237 ggcatcctcgccgtcctcg 62255
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>dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0483C08
          Length = 143855

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 75     cctcgccgtcctcggcgtcggcg 97
              |||||||||||||||| ||||||
Sbjct: 121516 cctcgccgtcctcggcttcggcg 121538
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>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0048K16
          Length = 159891

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 75    cctcgccgtcctcggcgtcggcg 97
             |||||||||||||||| ||||||
Sbjct: 10910 cctcgccgtcctcggcttcggcg 10932
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>dbj|AK121682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070B15, full
           insert sequence
          Length = 1510

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 70  ggcatcctcgccgtcctcg 88
           |||||||||||||||||||
Sbjct: 832 ggcatcctcgccgtcctcg 814
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>dbj|AK119905.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-D10, full
           insert sequence
          Length = 1750

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 70  ggcatcctcgccgtcctcg 88
           |||||||||||||||||||
Sbjct: 909 ggcatcctcgccgtcctcg 891
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>dbj|AK105398.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-C05, full
           insert sequence
          Length = 1639

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 70  ggcatcctcgccgtcctcg 88
           |||||||||||||||||||
Sbjct: 805 ggcatcctcgccgtcctcg 787
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>dbj|AK105149.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-D03, full
           insert sequence
          Length = 1162

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 75  cctcgccgtcctcggcgtcggcg 97
           |||||||||||||||| ||||||
Sbjct: 386 cctcgccgtcctcggcttcggcg 408
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>dbj|AK101933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073K22, full
           insert sequence
          Length = 1587

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 74  tcctcgccgtcctcggcgtcggc 96
           |||||||||||||||||| ||||
Sbjct: 751 tcctcgccgtcctcggcgccggc 729
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>dbj|AK063307.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F11, full
           insert sequence
          Length = 1689

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 70  ggcatcctcgccgtcctcg 88
           |||||||||||||||||||
Sbjct: 617 ggcatcctcgccgtcctcg 635
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>gb|AE003582.4| Drosophila melanogaster chromosome 2L, section 9 of 83 of the complete
              sequence
          Length = 295132

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 68     gcggcatcctcgccgtcct 86
              |||||||||||||||||||
Sbjct: 218915 gcggcatcctcgccgtcct 218897
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 79     gccgtcctcggcgtcggcg 97
              |||||||||||||||||||
Sbjct: 662943 gccgtcctcggcgtcggcg 662925
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>gb|AC005558.1|AC005558 Drosophila melanogaster DNA sequence (P1s DS08923 (D95) and DS06400
             (D74)), complete sequence
          Length = 124700

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 68    gcggcatcctcgccgtcct 86
             |||||||||||||||||||
Sbjct: 54261 gcggcatcctcgccgtcct 54279
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 70      ggcatcctcgccgtcctcg 88
               |||||||||||||||||||
Sbjct: 5167239 ggcatcctcgccgtcctcg 5167221
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>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15,
             complete sequence
          Length = 133413

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 75    cctcgccgtcctcggcgtcggcg 97
             ||||| |||||||||||||||||
Sbjct: 91111 cctcgacgtcctcggcgtcggcg 91089
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>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940127D9, complete sequence
          Length = 102832

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 69    cggcatcctcgccgtcctc 87
             |||||||||||||||||||
Sbjct: 50916 cggcatcctcgccgtcctc 50934


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 441,089
Number of Sequences: 3902068
Number of extensions: 441089
Number of successful extensions: 34742
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33136
Number of HSP's gapped (non-prelim): 1606
length of query: 97
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 76
effective length of database: 17,151,101,840
effective search space: 1303483739840
effective search space used: 1303483739840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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