>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 32.0 bits (71), Expect(2) = 0.002
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = -2

Query: 312 RGRHGEGRIRAFTSFRI*SNSSKDTCCEPPRSPGTRSRRDQSTCATWSISADTCSPTTAG 133
           R R GEG +R    F   S+S  D+   P RSP   + R  +  A  S S+ + S +++ 
Sbjct: 332 RRRAGEGALRRGRGFSSSSSSGSDSDLSPARSPS--APRAPAAAARRSASSSSSSSSSSS 389

Query: 132 GSALPAWGEG 103
            S+  +  EG
Sbjct: 390 SSSSSSSSEG 399



 Score = 26.9 bits (58), Expect(2) = 0.002
 Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -1

Query: 61  GFLSGAPWAR-GPPPSAPTP 5
           G   GAP AR GPPPS P P
Sbjct: 404 GVRPGAPLARAGPPPSPPAP 423

>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 28.9 bits (63), Expect(2) = 0.013
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = -2

Query: 312 RGRHGEGRIRAFTSFRI*SNSSKDTCCEPPRSPGT-RSRRDQSTCATWSISADTCSPTTA 136
           R R GEG +R    F   S+   D+   P RSP   R+    +  A  S S+ + S +++
Sbjct: 340 RRRAGEGALRRGRGFSSSSSGGSDSDLSPARSPSAPRAPAAAAAAARRSASSSSSSSSSS 399

Query: 135 GGSALPAWGEGRG 97
             S+     E  G
Sbjct: 400 SSSSSSEGEEDEG 412



 Score = 26.9 bits (58), Expect(2) = 0.013
 Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -1

Query: 61  GFLSGAPWAR-GPPPSAPTP 5
           G   GAP AR GPPPS P P
Sbjct: 412 GVRPGAPLARAGPPPSPPAP 431

>ADA1B_CANFA (P11615) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor) (Fragment)
          Length = 417

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 225 PRSPGTRSRRDQSTCATWSISADTCSPTTAGGSALPA 115
           P+ PG R RRD     T+ + A+  SP    G+  PA
Sbjct: 360 PQPPGRRGRRDSGPLFTFRLLAERGSPAAGDGACRPA 396

>GDF6_HUMAN (Q6KF10) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 455

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 6   GVGAEGGGPRAQGAPERKPW 65
           G GAEG  P   GAP+ +PW
Sbjct: 306 GAGAEGSWPPPSGAPDARPW 325

>HIS7_RHOBA (Q7UNC2) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 202

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -1

Query: 313 EGSSWGRKDKGIHFIQNMIQLLKRYLL 233
           +GS  G++D GI F+ +M+ LL ++ L
Sbjct: 30  DGSGAGKRDSGIGFLDHMLDLLAKHAL 56

>GUN4_THEFU (P26221) Endoglucanase E-4 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase E-4) (Cellulase E-4) (Cellulase
           E4)
          Length = 880

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = -2

Query: 228 PPRSPGTRSRRD---QSTCATWSISADTCSPTTAGGSALPAWGEGR 100
           PP +PG+ + RD    S   TWS S+DT     AG       G G+
Sbjct: 675 PPSAPGSPAVRDVTSTSAVLTWSASSDTGGSGVAGYDVFLRAGTGQ 720

>GAT14_ARATH (Q9FH57) GATA transcription factor 14|
          Length = 339

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = -2

Query: 249 SKDTCCEPPRSPGTRSRRDQSTCATWSISADTCSPTTAGGS 127
           +++TC + P     RS+R+++    WS+ + + S  ++ GS
Sbjct: 155 TEETCFKSPVPAKARSKRNRNGLKVWSLGSSSSSGPSSSGS 195

>CU069_HUMAN (P58556) Protein C21orf69|
          Length = 163

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -3

Query: 77 LPRRPWFPLRGS-LGPRPSSLRAHP 6
          L  RPW P +   LGP P S R HP
Sbjct: 9  LKPRPWAPAQAQGLGPEPHSARPHP 33

>DCDA_MYCSM (Q9X5M1) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP|
           decarboxylase)
          Length = 474

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +3

Query: 285 LSFLPHDDPSPVRTMA 332
           +S+LPHDDP P++ +A
Sbjct: 286 ISYLPHDDPPPMKELA 301

>MTHR_HUMAN (P42898) Methylenetetrahydrofolate reductase (EC 1.5.1.20)|
          Length = 656

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 255 NSSKDTCCEPPRSPGTRSRRDQSTCAT 175
           NSS + C E   S G+ S +D S C+T
Sbjct: 8   NSSLNPCLEGSASSGSESSKDSSRCST 34

>ADA1B_HUMAN (P35368) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 519

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 225 PRSPGTRSRRDQSTCATWSISADTCSPTTAGGSA 124
           P  PG R R D     T+ +  +  SP T GG++
Sbjct: 458 PEPPGRRGRHDSGPLFTFKLLTEPESPGTDGGAS 491

>G3P_ONCMY (O42259) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)|
           (GAPDH)
          Length = 335

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -2

Query: 276 TSFRI*SNSSKDTCCEPPRSPGTRSRRDQSTCATWSISADTCSPTTAGGSALPAWGEGRG 97
           +S  I SN+S  T C  P +               ++ A T +  T  G +  AW +GRG
Sbjct: 142 SSMTIVSNASCTTNCLAPLAKVIHDNFGIEEALMTTVHAYTATQKTVDGPSAKAWRDGRG 201


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,129,198
Number of Sequences: 219361
Number of extensions: 499193
Number of successful extensions: 2426
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2424
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)