>gb|AY466010.2| Triticum turgidum subsp. durum putative ribokinase (7H8) gene,
           complete cds
          Length = 3671

 Score =  272 bits (137), Expect = 7e-70
 Identities = 143/145 (98%)
 Strand = Plus / Plus

                                                                       
Query: 96  ttcctcttccctccccccaggccggcaaggcggacccgccggcggtggtggggctgcagg 155
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35  ttcctcttcccttcccccaggccggcaaggcggacccgccggcggtggtggggctgcagg 94

                                                                       
Query: 156 tgtcggcgctgatcgaccacgtcgcacacgtcgactggtccctcctcgaccgcgtccccg 215
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 95  tgtcggcgctgatcgaccacgtcgcacgcgtcgactggtccctcctcgaccgcgtccccg 154

                                    
Query: 216 gcgaccgcggcggctcgcagcaggt 240
           |||||||||||||||||||||||||
Sbjct: 155 gcgaccgcggcggctcgcagcaggt 179



 Score =  184 bits (93), Expect = 1e-43
 Identities = 103/105 (98%), Gaps = 1/105 (0%)
 Strand = Plus / Plus

                                                                        
Query: 236  caggtatcttttgaggagttggatcatattctgaatgaagtgaatgcccttatccttcct 295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1876 caggtatcttttgaggagttggatcatattctgaatgaagtgaatgcccttatccttcct 1935

                                                         
Query: 296  tccccatgacgacccctctccagtcagaactatggctggtggtag 340
            | |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1936 t-cccatgacgacccctctccagtaagaactatggctggtggtag 1979

>ref|XM_549842.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1549

 Score =  159 bits (80), Expect = 7e-36
 Identities = 128/144 (88%)
 Strand = Plus / Plus

                                                                       
Query: 139 ggtggtggggctgcaggtgtcggcgctgatcgaccacgtcgcacacgtcgactggtccct 198
           |||| |||| |||||| |||||||||| |||||||||||||| | |||||||||||||||
Sbjct: 206 ggtgctgggcctgcagctgtcggcgctcatcgaccacgtcgcgcgcgtcgactggtccct 265

                                                                       
Query: 199 cctcgaccgcgtccccggcgaccgcggcggctcgcagcaggtatcttttgaggagttgga 258
           |||| ||||| ||||||||||||||||||| || |||||||| | | ||||||||||| |
Sbjct: 266 cctcaaccgcatccccggcgaccgcggcggttcacagcaggtctgtattgaggagttgaa 325

                                   
Query: 259 tcatattctgaatgaagtgaatgc 282
           ||||||||||  ||||||||||||
Sbjct: 326 tcatattctggctgaagtgaatgc 349

>dbj|AK066907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092I02, full
           insert sequence
          Length = 1549

 Score =  151 bits (76), Expect = 2e-33
 Identities = 127/144 (88%)
 Strand = Plus / Plus

                                                                       
Query: 139 ggtggtggggctgcaggtgtcggcgctgatcgaccacgtcgcacacgtcgactggtccct 198
           |||| |||| |||||| |||||||||| |||||||||||||| | |||||||||||||||
Sbjct: 206 ggtgctgggcctgcagctgtcggcgctcatcgaccacgtcgcgcgcgtcgactggtccct 265

                                                                       
Query: 199 cctcgaccgcgtccccggcgaccgcggcggctcgcagcaggtatcttttgaggagttgga 258
           |||| ||||| |||||||||||| |||||| || |||||||| | | ||||||||||| |
Sbjct: 266 cctcaaccgcatccccggcgacctcggcggttcacagcaggtctgtattgaggagttgaa 325

                                   
Query: 259 tcatattctgaatgaagtgaatgc 282
           ||||||||||  ||||||||||||
Sbjct: 326 tcatattctggctgaagtgaatgc 349

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score =  125 bits (63), Expect = 1e-25
 Identities = 93/103 (90%)
 Strand = Plus / Minus

                                                                          
Query: 139    ggtggtggggctgcaggtgtcggcgctgatcgaccacgtcgcacacgtcgactggtccct 198
              |||| |||| |||||| |||||||||| |||||||||||||| | |||||||||||||||
Sbjct: 311966 ggtgctgggcctgcagctgtcggcgctcatcgaccacgtcgcgcgcgtcgactggtccct 311907

                                                         
Query: 199    cctcgaccgcgtccccggcgaccgcggcggctcgcagcaggta 241
              |||| ||||| ||||||||||||||||||| || |||||||||
Sbjct: 311906 cctcaaccgcatccccggcgaccgcggcggttcacagcaggta 311864



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 246    ttgaggagttggatcatattctgaatgaagtgaatgc 282
              ||||||||||| |||||||||||  ||||||||||||
Sbjct: 310419 ttgaggagttgaatcatattctggctgaagtgaatgc 310383

>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0005A05
          Length = 190834

 Score =  125 bits (63), Expect = 1e-25
 Identities = 93/103 (90%)
 Strand = Plus / Minus

                                                                         
Query: 139   ggtggtggggctgcaggtgtcggcgctgatcgaccacgtcgcacacgtcgactggtccct 198
             |||| |||| |||||| |||||||||| |||||||||||||| | |||||||||||||||
Sbjct: 63804 ggtgctgggcctgcagctgtcggcgctcatcgaccacgtcgcgcgcgtcgactggtccct 63745

                                                        
Query: 199   cctcgaccgcgtccccggcgaccgcggcggctcgcagcaggta 241
             |||| ||||| ||||||||||||||||||| || |||||||||
Sbjct: 63744 cctcaaccgcatccccggcgaccgcggcggttcacagcaggta 63702



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 246   ttgaggagttggatcatattctgaatgaagtgaatgc 282
             ||||||||||| |||||||||||  ||||||||||||
Sbjct: 62257 ttgaggagttgaatcatattctggctgaagtgaatgc 62221

>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 5      gggggtgggcgcggagggaggagggccgcgggcc 38
              ||||| |||||||||||  |||||||||||||||
Sbjct: 120726 gggggcgggcgcggaggcgggagggccgcgggcc 120693



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 5    gggggtgggcgcggagggaggagggccgcgggcc 38
            ||||| |||||||||||  |||||||||||||||
Sbjct: 5132 gggggcgggcgcggaggcgggagggccgcgggcc 5165

>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 8      ggtgggcgcggagggaggagggccg 32
              ||||||||||||| |||||||||||
Sbjct: 144227 ggtgggcgcggagcgaggagggccg 144251



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 8      ggtgggcgcggagggaggagggccg 32
              ||||||||||||| |||||||||||
Sbjct: 129782 ggtgggcgcggagcgaggagggccg 129758

>ref|XM_470717.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 795

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 210 tccccggcgaccgcggcggct 230
           |||||||||||||||||||||
Sbjct: 362 tccccggcgaccgcggcggct 382

>gb|AF394556.1| Oryza sativa alpha-expansin OsEXPA21 (EXPA21) gene, complete cds
          Length = 3929

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 210  tccccggcgaccgcggcggct 230
            |||||||||||||||||||||
Sbjct: 2634 tccccggcgaccgcggcggct 2654

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 210      tccccggcgaccgcggcggct 230
                |||||||||||||||||||||
Sbjct: 14733427 tccccggcgaccgcggcggct 14733447

>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16
          Length = 349635

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 148   gctgcaggtgtcggcgctgatcgac 172
             ||||| |||||||||||||||||||
Sbjct: 36753 gctgctggtgtcggcgctgatcgac 36777

>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete
             sequence
          Length = 130306

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 210   tccccggcgaccgcggcggct 230
             |||||||||||||||||||||
Sbjct: 72339 tccccggcgaccgcggcggct 72359

>gb|DQ061062.1| Oryza sativa (japonica cultivar-group) alpha-expansin 21 (EXPA21)
           mRNA, partial cds
          Length = 727

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 210 tccccggcgaccgcggcggct 230
           |||||||||||||||||||||
Sbjct: 339 tccccggcgaccgcggcggct 359

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 210      tccccggcgaccgcggcggct 230
                |||||||||||||||||||||
Sbjct: 14727961 tccccggcgaccgcggcggct 14727981

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 200     ctcgaccgcgtccccggcgaccgcg 224
               ||||||| |||||||||||||||||
Sbjct: 3930813 ctcgacctcgtccccggcgaccgcg 3930837



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 120     gcaaggcggacccgccggcggtggtggg 147
               |||| ||||||| |||||||||||||||
Sbjct: 4627577 gcaacgcggacctgccggcggtggtggg 4627550

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 116     gccggcaaggcggacccgccggcgg 140
               ||||||||||||||| |||||||||
Sbjct: 2259387 gccggcaaggcggacgcgccggcgg 2259363

>ref|XM_477950.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2717

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 206 cgcgtccccggcgaccgcggcggc 229
           ||||||||||||||| ||||||||
Sbjct: 405 cgcgtccccggcgacggcggcggc 428

>emb|AL805961.22| Human DNA sequence from clone RP11-718D19 on chromosome 1, complete
              sequence
          Length = 166258

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 5      gggggtgggcgcggagggaggagg 28
              ||||||||||| ||||||||||||
Sbjct: 101660 gggggtgggcgtggagggaggagg 101683

>gb|AC020934.9| Homo sapiens chromosome 19 clone CTD-2265O21, complete sequence
          Length = 119347

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     gggtgggcgcggagggagga 26
             ||||||||||||||||||||
Sbjct: 39270 gggtgggcgcggagggagga 39289

>gb|AC021451.8| Homo sapiens chromosome 8, clone RP11-101E19, complete sequence
          Length = 173127

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    ttcctcttccctccccccag 115
             ||||||||||||||||||||
Sbjct: 76363 ttcctcttccctccccccag 76382

>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin
             biosynthetic gene cluster, complete sequence
          Length = 95700

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   cacacgtcgactggtccctc 199
             ||||||||||||||||||||
Sbjct: 77107 cacacgtcgactggtccctc 77088

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 206      cgcgtccccggcgaccgcggcggc 229
                ||||||||||||||| ||||||||
Sbjct: 15848164 cgcgtccccggcgacggcggcggc 15848141

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 184     cgtcgactggtccctcctcg 203
               ||||||||||||||||||||
Sbjct: 1742962 cgtcgactggtccctcctcg 1742981

>gb|AC090952.3| Homo sapiens chromosome 3 clone RP11-588H7 map 3p, complete sequence
          Length = 189723

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    ggagggccgcgggcccaaggagcc 47
             ||||||||||||||||| ||||||
Sbjct: 70896 ggagggccgcgggcccagggagcc 70873

>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0027N13
          Length = 179669

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 206   cgcgtccccggcgaccgcggcggc 229
             ||||||||||||||| ||||||||
Sbjct: 87678 cgcgtccccggcgacggcggcggc 87655

>dbj|AK101301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033K06, full
           insert sequence
          Length = 2717

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 206 cgcgtccccggcgaccgcggcggc 229
           ||||||||||||||| ||||||||
Sbjct: 405 cgcgtccccggcgacggcggcggc 428

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     aggaaaccatgggcgccgag 73
              ||||||||||||||||||||
Sbjct: 245829 aggaaaccatgggcgccgag 245848

>gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, complete sequence
          Length = 248750

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    ggcggtggtggggctgcagg 155
              ||||||||||||||||||||
Sbjct: 172859 ggcggtggtggggctgcagg 172878

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     ccgcgtccccggcgaccgcg 224
               ||||||||||||||||||||
Sbjct: 2168812 ccgcgtccccggcgaccgcg 2168831

>gb|U18792.1|BBU18792 Babesia bovis glutamine-dependent carbamoyl phosphate synthase
            (CPSII) gene, complete cds
          Length = 9149

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 239  gtatcttttgaggagttgga 258
            ||||||||||||||||||||
Sbjct: 5366 gtatcttttgaggagttgga 5385

>gb|AC161466.4| Gallus gallus BAC clone CH261-104N11 from chromosome ul, complete
              sequence
          Length = 189905

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    tgaatgcccttatccttcct 295
              ||||||||||||||||||||
Sbjct: 154321 tgaatgcccttatccttcct 154340


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,203,951
Number of Sequences: 3902068
Number of extensions: 3203951
Number of successful extensions: 59375
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58566
Number of HSP's gapped (non-prelim): 808
length of query: 340
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 318
effective length of database: 17,147,199,772
effective search space: 5452809527496
effective search space used: 5452809527496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)