ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart52c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474411.1| Oryza sativa (japonica cultivar-group), predic... 230 3e-57
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
3emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 198 1e-47
4emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 198 1e-47
5ref|XM_479651.1| Oryza sativa (japonica cultivar-group), mRNA 113 5e-22
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
7dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
8dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
9gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
11gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 48 0.026
12ref|NM_193686.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
13gb|AC101391.15| Mus musculus chromosome 5, clone RP23-119E13, co... 42 1.6
14gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.6
15gb|BT015224.1| Drosophila melanogaster RE33368 full insert cDNA 42 1.6
16gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 42 1.6
17gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.6
18gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 1.6
19ref|XM_755648.1| Ustilago maydis 521 hypothetical protein (UM045... 42 1.6
20gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosom... 42 1.6
21gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, comple... 42 1.6
22gb|AC151985.2| Mus musculus BAC clone RP23-381C14 from chromosom... 42 1.6
23emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
24dbj|AP004611.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25gb|AC073534.4| Homo sapiens chromosome 19 clone CTD-2027I19, com... 42 1.6
26ref|NM_170166.2| Drosophila melanogaster CG13627-RB, transcript ... 42 1.6
27ref|NM_143022.2| Drosophila melanogaster CG13627-RA, transcript ... 42 1.6
28gb|AC073535.3| Homo sapiens chromosome 19 clone CTD-2037K13, com... 42 1.6
29gb|AC090736.5| Homo sapiens chromosome 8, clone RP11-1126C1, com... 42 1.6
30gb|AC011512.8| Homo sapiens chromosome 19 clone LLNLF-101G11, co... 42 1.6
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
32gb|AC008205.7|AC008205 Drosophila melanogaster, chromosome 3R, r... 42 1.6
33gb|AC009916.5|AC009916 Drosophila melanogaster, chromosome 3R, r... 42 1.6
34gb|AC011550.5| Homo sapiens chromosome 19 clone LLNLR-274G1, com... 42 1.6
35dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
36dbj|AK111464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
37gb|AE003749.3| Drosophila melanogaster chromosome 3R, section 87... 42 1.6
38gb|BT001611.1| Drosophila melanogaster RE32656 full insert cDNA 42 1.6
39dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.6
40emb|AL606986.27| Mouse DNA sequence from clone RP23-258K3 on chr... 42 1.6
41gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 6.3
42ref|XM_508934.1| PREDICTED: Pan troglodytes similar to TEA domai... 40 6.3
43gb|AC161218.10| Mus musculus chromosome 7, clone RP24-161J8, com... 40 6.3
44ref|XM_472751.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
45gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 6.3
46gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosom... 40 6.3
47ref|XM_868951.1| PREDICTED: Bos taurus similar to DNA polymerase... 40 6.3
48gb|AE009110.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 6.3
49gb|AY180139.1| Phytomonas sp. Ascl.cu.Vz small subunit ribosomal... 40 6.3
50gb|AY033495.1| Homo sapiens keratin protein K6irs (KRT6) mRNA, c... 40 6.3
51gb|AY033496.1| Homo sapiens keratin protein K6irs (KRT6) gene, c... 40 6.3
52gb|AC148477.3| Homo sapiens 12 BAC RP13-895J2 (Roswell Park Canc... 40 6.3
53gb|AF525691.2| Chlamydomonas reinhardtii RNA polymerase sigma fa... 40 6.3
54gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.3
55gb|DQ400445.1| Ictalurus punctatus immunoglobulin heavy chain ge... 40 6.3
56emb|AL390755.5| Human DNA sequence from clone RP11-472K17 on chr... 40 6.3
57emb|AL354944.22| Human DNA sequence from clone RP11-106H5 on chr... 40 6.3
58gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 6.3
59gb|AC112649.9| Homo sapiens 3 BAC RP11-65J14 (Roswell Park Cance... 40 6.3
60emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.3
61emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.3
62emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.3
63emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 40 6.3
64emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 40 6.3
65emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4,... 40 6.3
66emb|AJ627180.1| Chlamydomonas reinhardtii sig1 gene for sigma-li... 40 6.3
67emb|AJ001224.1|AEALEO Ralstonia sp. CH34 aleO gene and orf333 40 6.3
68dbj|AB211543.1| Sphingomonas sp. A1 p7 gene for alginate-binding... 40 6.3
69dbj|AK093060.1| Homo sapiens cDNA FLJ35741 fis, clone TESTI20041... 40 6.3
70gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 6.3
71gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.3
72gb|AC055715.13|AC055715 Homo sapiens 12 BAC RP11-593B8 (Roswell ... 40 6.3
73gb|AF361547.1|AF361547 Homo sapiens undulin gene, promoter regio... 40 6.3
74ref|NM_080747.1| Homo sapiens keratin protein K6irs (K6IRS2), mRNA 40 6.3
75dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.3
76dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.3
77dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.3
78emb|Z24588.1|HS349XC5 H. sapiens (D3S1617) DNA segment containin... 40 6.3
79gb|AF118856.1|AF118856 Streptomyces noursei putative pleitropic ... 40 6.3
80gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.3
81emb|AL049734.11|HSJ154J13 Human DNA sequence from clone RP1-154J... 40 6.3
82gb|M26549.1|HUMCOL1A13 Human alpha-1 collagen type IV gene, exon 19 40 6.3 
>ref|XM_474411.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 675

 Score =  230 bits (116), Expect = 3e-57
 Identities = 188/212 (88%)
 Strand = Plus / Plus

                                                                       
Query: 255 accgcggcagccggtgcatggcgttcctcgacttcctgctgaggatcgcggcgttcgggc 314
           ||||||||||||||||| | ||||||||||||||| | ||| ||||||| || ||||| |
Sbjct: 170 accgcggcagccggtgcctcgcgttcctcgacttcatcctgcggatcgccgccttcggcc 229

                                                                       
Query: 315 cggcgctcgcggcggccatcgccaccggcacgtccgacgagacgctctccgtcttcaccg 374
           | || || |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ccgcactggcggcggccatctccaccggcacgtccgacgagacgctctccgtcttcaccg 289

                                                                       
Query: 375 agttcttccagttccgcgcccgtttcgacgacttcccagccttcctgttcctcatggtgg 434
           |||||| ||||||||||||| | ||||| |||||||| |||||||||||| || ||||||
Sbjct: 290 agttctaccagttccgcgccagattcgatgacttcccggccttcctgttcttcttggtgg 349

                                           
Query: 435 cgagcgcgatcgccgcggggtacctgctgctg 466
           ||| ||||||||  || ||||||||| |||||
Sbjct: 350 cgaacgcgatcgtggcagggtacctggtgctg 381
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  198 bits (100), Expect = 1e-47
 Identities = 151/168 (89%)
 Strand = Plus / Plus

                                                                            
Query: 255      accgcggcagccggtgcatggcgttcctcgacttcctgctgaggatcgcggcgttcgggc 314
                ||||||||||||||||| | ||||||||||||||| | ||| ||||||| || ||||| |
Sbjct: 34985864 accgcggcagccggtgcctcgcgttcctcgacttcatcctgcggatcgccgccttcggcc 34985923

                                                                            
Query: 315      cggcgctcgcggcggccatcgccaccggcacgtccgacgagacgctctccgtcttcaccg 374
                | || || |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 34985924 ccgcactggcggcggccatctccaccggcacgtccgacgagacgctctccgtcttcaccg 34985983

                                                                
Query: 375      agttcttccagttccgcgcccgtttcgacgacttcccagccttcctgt 422
                |||||| ||||||||||||| | ||||| |||||||| ||||||||||
Sbjct: 34985984 agttctaccagttccgcgccagattcgatgacttcccggccttcctgt 34986031



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                            
Query: 329      gccatcgccaccggcacgtccgacgagacgctctccgtcttcaccgagttcttccagttc 388
                ||||||||||  |||||  || ||||||||||| || |||||||  ||||| ||||||||
Sbjct: 22957329 gccatcgccatgggcaccaccaacgagacgctccccttcttcacgcagttcatccagttc 22957388
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>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete
             sequence
          Length = 94152

 Score =  198 bits (100), Expect = 1e-47
 Identities = 151/168 (89%)
 Strand = Plus / Plus

                                                                         
Query: 255   accgcggcagccggtgcatggcgttcctcgacttcctgctgaggatcgcggcgttcgggc 314
             ||||||||||||||||| | ||||||||||||||| | ||| ||||||| || ||||| |
Sbjct: 16020 accgcggcagccggtgcctcgcgttcctcgacttcatcctgcggatcgccgccttcggcc 16079

                                                                         
Query: 315   cggcgctcgcggcggccatcgccaccggcacgtccgacgagacgctctccgtcttcaccg 374
             | || || |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 16080 ccgcactggcggcggccatctccaccggcacgtccgacgagacgctctccgtcttcaccg 16139

                                                             
Query: 375   agttcttccagttccgcgcccgtttcgacgacttcccagccttcctgt 422
             |||||| ||||||||||||| | ||||| |||||||| ||||||||||
Sbjct: 16140 agttctaccagttccgcgccagattcgatgacttcccggccttcctgt 16187
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>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
             complete sequence
          Length = 145391

 Score =  198 bits (100), Expect = 1e-47
 Identities = 151/168 (89%)
 Strand = Plus / Plus

                                                                         
Query: 255   accgcggcagccggtgcatggcgttcctcgacttcctgctgaggatcgcggcgttcgggc 314
             ||||||||||||||||| | ||||||||||||||| | ||| ||||||| || ||||| |
Sbjct: 44914 accgcggcagccggtgcctcgcgttcctcgacttcatcctgcggatcgccgccttcggcc 44973

                                                                         
Query: 315   cggcgctcgcggcggccatcgccaccggcacgtccgacgagacgctctccgtcttcaccg 374
             | || || |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 44974 ccgcactggcggcggccatctccaccggcacgtccgacgagacgctctccgtcttcaccg 45033

                                                             
Query: 375   agttcttccagttccgcgcccgtttcgacgacttcccagccttcctgt 422
             |||||| ||||||||||||| | ||||| |||||||| ||||||||||
Sbjct: 45034 agttctaccagttccgcgccagattcgatgacttcccggccttcctgt 45081
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>ref|XM_479651.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 714

 Score =  113 bits (57), Expect = 5e-22
 Identities = 111/129 (86%)
 Strand = Plus / Plus

                                                                       
Query: 329 gccatcgccaccggcacgtccgacgagacgctctccgtcttcaccgagttcttccagttc 388
           |||||| ||| |||||| |||||||||| |||||||||||||||| | | ||||||||||
Sbjct: 265 gccatctccatcggcacctccgacgagaggctctccgtcttcaccaactacttccagttc 324

                                                                       
Query: 389 cgcgcccgtttcgacgacttcccagccttcctgttcctcatggtggcgagcgcgatcgcc 448
           |||||| | |||||||||||||| || |||  |||| |||| |||||||  |||||||| 
Sbjct: 325 cgcgccagattcgacgacttcccggctttcgagttcttcattgtggcgaatgcgatcgcg 384

                    
Query: 449 gcggggtac 457
           |||||||||
Sbjct: 385 gcggggtac 393
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                          
Query: 329    gccatcgccaccggcacgtccgacgagacgctctccgtcttcaccgagttcttccagttc 388
              |||||| ||| |||||| |||||||||| |||||||||||||||| | | ||||||||||
Sbjct: 102364 gccatctccatcggcacctccgacgagaggctctccgtcttcaccaactacttccagttc 102423

                                     
Query: 389    cgcgcccgtttcgacgacttccc 411
              |||||| | ||||||||||||||
Sbjct: 102424 cgcgccagattcgacgacttccc 102446
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>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0015C07
          Length = 149079

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                         
Query: 329   gccatcgccaccggcacgtccgacgagacgctctccgtcttcaccgagttcttccagttc 388
             |||||| ||| |||||| |||||||||| |||||||||||||||| | | ||||||||||
Sbjct: 17699 gccatctccatcggcacctccgacgagaggctctccgtcttcaccaactacttccagttc 17758

                                    
Query: 389   cgcgcccgtttcgacgacttccc 411
             |||||| | ||||||||||||||
Sbjct: 17759 cgcgccagattcgacgacttccc 17781
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>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1147B12
          Length = 127902

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                          
Query: 329    gccatcgccaccggcacgtccgacgagacgctctccgtcttcaccgagttcttccagttc 388
              |||||| ||| |||||| |||||||||| |||||||||||||||| | | ||||||||||
Sbjct: 102364 gccatctccatcggcacctccgacgagaggctctccgtcttcaccaactacttccagttc 102423

                                     
Query: 389    cgcgcccgtttcgacgacttccc 411
              |||||| | ||||||||||||||
Sbjct: 102424 cgcgccagattcgacgacttccc 102446
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>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15,
              complete sequence
          Length = 168519

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                             
Query: 350    gacgagacgctctccgtcttcaccgagttct 380
              |||||||||||||||||||||||||||||||
Sbjct: 115593 gacgagacgctctccgtcttcaccgagttct 115563
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                               
Query: 350      gacgagacgctctccgtcttcaccgagttct 380
                |||||||||||||||||||||||||||||||
Sbjct: 23430057 gacgagacgctctccgtcttcaccgagttct 23430027
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 288     tcctgctgaggatcgcggcgttcgggccggcgctcg 323
               |||||||| ||||||||||||||||  |||||||||
Sbjct: 4509171 tcctgctggggatcgcggcgttcggcgcggcgctcg 4509136
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>ref|NM_193686.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1305

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 177 cgcctccggctgccgccccagccgcggccgcga 209
           |||||||||||||||  |||||||| |||||||
Sbjct: 678 cgcctccggctgccgtgccagccgccgccgcga 710
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>gb|AC101391.15| Mus musculus chromosome 5, clone RP23-119E13, complete sequence
          Length = 209590

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 51    cttctctcctcctcctcaccc 71
             |||||||||||||||||||||
Sbjct: 94838 cttctctcctcctcctcaccc 94818
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 154     ggcccccgcggcggcgccttc 174
               |||||||||||||||||||||
Sbjct: 1895220 ggcccccgcggcggcgccttc 1895200
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>gb|BT015224.1| Drosophila melanogaster RE33368 full insert cDNA
          Length = 2540

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 60   tcctcctcaccccgtccccagacat 84
            ||||||||| |||||||||||||||
Sbjct: 1029 tcctcctcagcccgtccccagacat 1053
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 433     ggcgagcgcgatcgccgcggg 453
               |||||||||||||||||||||
Sbjct: 3125648 ggcgagcgcgatcgccgcggg 3125628
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 154     ggcccccgcggcggcgccttc 174
               |||||||||||||||||||||
Sbjct: 1534676 ggcccccgcggcggcgccttc 1534696
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 162   cggcggcgccttccgcgcctccggc 186
             ||||||||||| |||||||||||||
Sbjct: 64828 cggcggcgcctgccgcgcctccggc 64804
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>ref|XM_755648.1| Ustilago maydis 521 hypothetical protein (UM04594.1) partial mRNA
          Length = 1704

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 agccgcggccgcgacgacagc 216
           |||||||||||||||||||||
Sbjct: 114 agccgcggccgcgacgacagc 94
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>gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosome 12, complete
             sequence
          Length = 175727

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    ccccccaccttctctcctcct 63
             |||||||||||||||||||||
Sbjct: 20155 ccccccaccttctctcctcct 20175
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>gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, complete sequence
          Length = 179390

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 43     ccccccaccttctctcctcct 63
              |||||||||||||||||||||
Sbjct: 136379 ccccccaccttctctcctcct 136399
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>gb|AC151985.2| Mus musculus BAC clone RP23-381C14 from chromosome 5, complete sequence
          Length = 204862

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 51    cttctctcctcctcctcaccc 71
             |||||||||||||||||||||
Sbjct: 24188 cttctctcctcctcctcaccc 24168
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 154     ggcccccgcggcggcgccttc 174
               |||||||||||||||||||||
Sbjct: 1421764 ggcccccgcggcggcgccttc 1421784
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>dbj|AP004611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1005_B10
          Length = 142680

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 177    cgcctccggctgccgccccagccgcggccgcga 209
              |||||||||||||||  |||||||| |||||||
Sbjct: 133806 cgcctccggctgccgtgccagccgccgccgcga 133838
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>gb|AC073534.4| Homo sapiens chromosome 19 clone CTD-2027I19, complete sequence
          Length = 106169

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 50    ccttctctcctcctcctcacc 70
             |||||||||||||||||||||
Sbjct: 76866 ccttctctcctcctcctcacc 76846
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>ref|NM_170166.2| Drosophila melanogaster CG13627-RB, transcript variant B (CG13627),
           mRNA
          Length = 2403

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 60  tcctcctcaccccgtccccagacat 84
           ||||||||| |||||||||||||||
Sbjct: 915 tcctcctcagcccgtccccagacat 939
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>ref|NM_143022.2| Drosophila melanogaster CG13627-RA, transcript variant A (CG13627),
            mRNA
          Length = 2517

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 60   tcctcctcaccccgtccccagacat 84
            ||||||||| |||||||||||||||
Sbjct: 1029 tcctcctcagcccgtccccagacat 1053
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>gb|AC073535.3| Homo sapiens chromosome 19 clone CTD-2037K13, complete sequence
          Length = 150840

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 50   ccttctctcctcctcctcacc 70
            |||||||||||||||||||||
Sbjct: 7618 ccttctctcctcctcctcacc 7598
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>gb|AC090736.5| Homo sapiens chromosome 8, clone RP11-1126C1, complete sequence
          Length = 145832

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 44    cccccaccttctctcctcctcctcacccc 72
             ||||||| |||||||||||||||| ||||
Sbjct: 56982 cccccactttctctcctcctcctctcccc 56954
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>gb|AC011512.8| Homo sapiens chromosome 19 clone LLNLF-101G11, complete sequence
          Length = 39588

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 50   ccttctctcctcctcctcacc 70
            |||||||||||||||||||||
Sbjct: 5051 ccttctctcctcctcctcacc 5031
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 177      cgcctccggctgccgccccagccgcggccgcga 209
                |||||||||||||||  |||||||| |||||||
Sbjct: 18746360 cgcctccggctgccgtgccagccgccgccgcga 18746392
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>gb|AC008205.7|AC008205 Drosophila melanogaster, chromosome 3R, region 96A-96B, BAC clone
            BACR33F18, complete sequence
          Length = 215711

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 60   tcctcctcaccccgtccccagacat 84
            ||||||||| |||||||||||||||
Sbjct: 2123 tcctcctcagcccgtccccagacat 2147
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>gb|AC009916.5|AC009916 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone
             BACR35N03, complete sequence
          Length = 169271

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 60    tcctcctcaccccgtccccagacat 84
             ||||||||| |||||||||||||||
Sbjct: 27173 tcctcctcagcccgtccccagacat 27149
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>gb|AC011550.5| Homo sapiens chromosome 19 clone LLNLR-274G1, complete sequence
          Length = 39980

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 50    ccttctctcctcctcctcacc 70
             |||||||||||||||||||||
Sbjct: 10563 ccttctctcctcctcctcacc 10583
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>dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1249E06
          Length = 126534

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 177   cgcctccggctgccgccccagccgcggccgcga 209
             |||||||||||||||  |||||||| |||||||
Sbjct: 67877 cgcctccggctgccgtgccagccgccgccgcga 67909
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>dbj|AK111464.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-D04, full
           insert sequence
          Length = 1196

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 177 cgcctccggctgccgccccagccgcggccgcga 209
           |||||||||||||||  |||||||| |||||||
Sbjct: 966 cgcctccggctgccgtgccagccgccgccgcga 998
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>gb|AE003749.3| Drosophila melanogaster chromosome 3R, section 87 of 118 of the
            complete sequence
          Length = 228433

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 60   tcctcctcaccccgtccccagacat 84
            ||||||||| |||||||||||||||
Sbjct: 5693 tcctcctcagcccgtccccagacat 5717
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>gb|BT001611.1| Drosophila melanogaster RE32656 full insert cDNA
          Length = 2422

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 60  tcctcctcaccccgtccccagacat 84
           ||||||||| |||||||||||||||
Sbjct: 915 tcctcctcagcccgtccccagacat 939
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 174     ccgcgcctccggctgccgccc 194
               |||||||||||||||||||||
Sbjct: 2471338 ccgcgcctccggctgccgccc 2471358
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>emb|AL606986.27| Mouse DNA sequence from clone RP23-258K3 on chromosome 4, complete
             sequence
          Length = 219634

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 47    ccaccttctctcctcctcctc 67
             |||||||||||||||||||||
Sbjct: 67318 ccaccttctctcctcctcctc 67338
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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 306     cgttcgggccggcgctcgcg 325
               ||||||||||||||||||||
Sbjct: 1369798 cgttcgggccggcgctcgcg 1369779
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>ref|XM_508934.1| PREDICTED: Pan troglodytes similar to TEA domain family member 4
            isoform 1; related transcription enhancer factor 1B;
            transcription factor RTEF-1; transcriptional enhancer
            factor 3; transcription factor 13-like 1 (LOC451756),
            mRNA
          Length = 2964

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 62   ctcctcaccccgtccccaga 81
            ||||||||||||||||||||
Sbjct: 2678 ctcctcaccccgtccccaga 2697
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>gb|AC161218.10| Mus musculus chromosome 7, clone RP24-161J8, complete sequence
          Length = 181156

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 44    cccccaccttctctcctcctcctc 67
             ||||| ||||||||||||||||||
Sbjct: 64602 ccccctccttctctcctcctcctc 64579
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>ref|XM_472751.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 561

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 329 gccatcgccaccggcacgtccgacgagacgctctccgtcttcaccgagttcttccagttc 388
           ||||||||||  |||||  || ||||||||||| || |||||||  ||||| ||||||||
Sbjct: 127 gccatcgccatgggcaccaccaacgagacgctccccttcttcacgcagttcatccagttc 186
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 123     acgtcgcccccggccagggcgcgc 146
               |||||||||||||||| |||||||
Sbjct: 3437724 acgtcgcccccggccatggcgcgc 3437747
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>gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosome 5, complete sequence
          Length = 236084

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     cccaccttctctcctcctcc 65
              ||||||||||||||||||||
Sbjct: 142099 cccaccttctctcctcctcc 142118
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>ref|XM_868951.1| PREDICTED: Bos taurus similar to DNA polymerase zeta catalytic
           subunit (hREV3) (LOC616836), mRNA
          Length = 3429

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 433 ggcgagcgcgatcgccgcgg 452
           ||||||||||||||||||||
Sbjct: 461 ggcgagcgcgatcgccgcgg 480
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>gb|AE009110.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 136
            of 256 of the complete sequence
          Length = 12023

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   ggccgccaccgtcatccccg 116
            ||||||||||||||||||||
Sbjct: 8529 ggccgccaccgtcatccccg 8548
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>gb|AY180139.1| Phytomonas sp. Ascl.cu.Vz small subunit ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene and internal transcribed spacer 2, complete
           sequence; and large subunit ribosomal RNA gene, partial
           sequence
          Length = 1112

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 34  ccccatcaaccccccaccttctct 57
           |||||||| |||||||||||||||
Sbjct: 949 ccccatcatccccccaccttctct 926
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>gb|AY033495.1| Homo sapiens keratin protein K6irs (KRT6) mRNA, complete cds
          Length = 1982

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 64  cctcaccccgtccccagaca 83
           ||||||||||||||||||||
Sbjct: 644 cctcaccccgtccccagaca 625
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>gb|AY033496.1| Homo sapiens keratin protein K6irs (KRT6) gene, complete cds
          Length = 16212

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   cctcaccccgtccccagaca 83
            ||||||||||||||||||||
Sbjct: 2849 cctcaccccgtccccagaca 2830
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>gb|AC148477.3| Homo sapiens 12 BAC RP13-895J2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160802

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    cctcaccccgtccccagaca 83
             ||||||||||||||||||||
Sbjct: 17255 cctcaccccgtccccagaca 17274
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>gb|AF525691.2| Chlamydomonas reinhardtii RNA polymerase sigma factor (RpoD) gene,
           complete cds; nuclear gene for chloroplast product
          Length = 5013

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 187 tgccgccccagccgcggccgcgac 210
           ||||| ||||||||||||||||||
Sbjct: 538 tgccggcccagccgcggccgcgac 515
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 327     cggccatcgccaccggcacg 346
               ||||||||||||||||||||
Sbjct: 3236523 cggccatcgccaccggcacg 3236504
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>gb|DQ400445.1| Ictalurus punctatus immunoglobulin heavy chain gene locus, partial
           sequence and unknown gene
          Length = 257153

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 48  caccttctctcctcctcctcaccc 71
           ||||| ||||||||||||||||||
Sbjct: 447 cacctgctctcctcctcctcaccc 424
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>emb|AL390755.5| Human DNA sequence from clone RP11-472K17 on chromosome 13 Contains a
              novel gene, the 3' end of the COL4A1 gene for collagen type
              IV alpha 1 and a CpG island, complete sequence
          Length = 186120

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 44     cccccaccttctctcctcctcctc 67
              ||||| ||||||||||||||||||
Sbjct: 151567 ccccctccttctctcctcctcctc 151544
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>emb|AL354944.22| Human DNA sequence from clone RP11-106H5 on chromosome 9 Contains the
             3'end of the ZNF297B gene for zinc finger protein 297B
             (ZNF-X, FLJ22470, KIAA0414), the gene for a novel protein
             (KIAA1993) and a CpG island, complete sequence
          Length = 49144

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   ctccggctgccgccccagcc 199
             ||||||||||||||||||||
Sbjct: 24101 ctccggctgccgccccagcc 24082
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 158     cccgcggcggcgccttccgc 177
               ||||||||||||||||||||
Sbjct: 2129905 cccgcggcggcgccttccgc 2129924
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>gb|AC112649.9| Homo sapiens 3 BAC RP11-65J14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 70655

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    ttctctcctcctcctcaccc 71
             ||||||||||||||||||||
Sbjct: 67602 ttctctcctcctcctcaccc 67583
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 434     gcgagcgcgatcgccgcggg 453
               ||||||||||||||||||||
Sbjct: 3002470 gcgagcgcgatcgccgcggg 3002489
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>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13
          Length = 348676

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 123    acgtcgcccccggccagggcgcgc 146
              |||||||||||||||| |||||||
Sbjct: 322896 acgtcgcccccggccatggcgcgc 322919
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>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14
          Length = 318050

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 123    acgtcgcccccggccagggcgcgc 146
              |||||||||||||||| |||||||
Sbjct: 273480 acgtcgcccccggccatggcgcgc 273503
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 274    ggcgttcctcgacttcctgctgag 297
              |||| |||||||||||||||||||
Sbjct: 164260 ggcgctcctcgacttcctgctgag 164283
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>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    ccgcgacgacagctccgcgc 223
              ||||||||||||||||||||
Sbjct: 257085 ccgcgacgacagctccgcgc 257104
to top
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16,
             complete sequence
          Length = 176383

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                         
Query: 329   gccatcgccaccggcacgtccgacgagacgctctccgtcttcaccgagttcttccagttc 388
             ||||||||||  |||||  || ||||||||||| || |||||||  ||||| ||||||||
Sbjct: 51785 gccatcgccatgggcaccaccaacgagacgctccccttcttcacgcagttcatccagttc 51844
to top
>emb|AJ627180.1| Chlamydomonas reinhardtii sig1 gene for sigma-like transcription
            factor, exons 1-4
          Length = 6047

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 187  tgccgccccagccgcggccgcgac 210
            ||||| ||||||||||||||||||
Sbjct: 1802 tgccggcccagccgcggccgcgac 1779
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>emb|AJ001224.1|AEALEO Ralstonia sp. CH34 aleO gene and orf333
          Length = 4132

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cggccatcgccaccggcacg 346
            ||||||||||||||||||||
Sbjct: 3628 cggccatcgccaccggcacg 3609
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>dbj|AB211543.1| Sphingomonas sp. A1 p7 gene for alginate-binding flagellin,
           complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 243 tccagcggagcgaccgcggc 262
           ||||||||||||||||||||
Sbjct: 86  tccagcggagcgaccgcggc 67
to top
>dbj|AK093060.1| Homo sapiens cDNA FLJ35741 fis, clone TESTI2004163, moderately
           similar to Mus musculus mRNA for type II cytokeratin
          Length = 1792

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 64  cctcaccccgtccccagaca 83
           ||||||||||||||||||||
Sbjct: 578 cctcaccccgtccccagaca 559
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 97      ggccgccaccgtcatccccg 116
               ||||||||||||||||||||
Sbjct: 1507120 ggccgccaccgtcatccccg 1507139
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 324     cggcggccatcgccaccggc 343
               ||||||||||||||||||||
Sbjct: 1535016 cggcggccatcgccaccggc 1535035
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>gb|AC055715.13|AC055715 Homo sapiens 12 BAC RP11-593B8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 86800

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    cctcaccccgtccccagaca 83
             ||||||||||||||||||||
Sbjct: 51439 cctcaccccgtccccagaca 51420
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>gb|AF361547.1|AF361547 Homo sapiens undulin gene, promoter region and partial 5'UTR sequence
          Length = 2572

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 45   ccccaccttctctcctcctcctcacccc 72
            |||||| |||||||||||||||| ||||
Sbjct: 1968 ccccactttctctcctcctcctctcccc 1941
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>ref|NM_080747.1| Homo sapiens keratin protein K6irs (K6IRS2), mRNA
          Length = 1985

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 64  cctcaccccgtccccagaca 83
           ||||||||||||||||||||
Sbjct: 644 cctcaccccgtccccagaca 625
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 318     cgctcgcggcggccatcgcc 337
               ||||||||||||||||||||
Sbjct: 4902681 cgctcgcggcggccatcgcc 4902700
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 333     tcgccaccggcacgtccgacgaga 356
               |||||||||||||| |||||||||
Sbjct: 3525013 tcgccaccggcacgcccgacgaga 3525036



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 433     ggcgagcgcgatcgccgcgg 452
               ||||||||||||||||||||
Sbjct: 3433191 ggcgagcgcgatcgccgcgg 3433172



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 316    ggcgctcgcggc-ggccatcgccaccgg 342
              |||||||||||| |||||||||||||||
Sbjct: 501116 ggcgctcgcggccggccatcgccaccgg 501143
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 310     cgggccggcgctcgcggcggccatcgcc 337
               |||| ||||| |||||||||||||||||
Sbjct: 5836780 cgggtcggcgttcgcggcggccatcgcc 5836807
to top
>emb|Z24588.1|HS349XC5 H. sapiens (D3S1617) DNA segment containing (CA) repeat; clone
           AFM349xc5; single read
          Length = 393

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  ttctctcctcctcctcaccc 71
           ||||||||||||||||||||
Sbjct: 261 ttctctcctcctcctcaccc 280
to top
>gb|AF118856.1|AF118856 Streptomyces noursei putative pleitropic regulator gene, partial cds;
            SsmA (ssmA) and SsmB precursor (ssmB) genes, complete
            cds; and putative AMP binding protein gene, partial cds
          Length = 1795

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 320  ctcgcggcggccatcgccaccggc 343
            |||||||||||||||||| |||||
Sbjct: 1051 ctcgcggcggccatcgccgccggc 1074
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 125     gtcgcccccggccagggcgc 144
               ||||||||||||||||||||
Sbjct: 3354210 gtcgcccccggccagggcgc 3354191
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>emb|AL049734.11|HSJ154J13 Human DNA sequence from clone RP1-154J13 on chromosome Xq26.1-26.3
            Contains a seven transmembrane helix receptor pseudogene,
            a pseudogene similar to part of seven transmembrane helix
            receptor, a pseudogene similar to part of
            PYRIN-containing Apaf1-like protein 3 (PYPAF3) and the
            gene for a novel protein similar to seven transmembrane
            helix receptor (FLJ31393), complete sequence
          Length = 126766

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 44   cccccaccttctctcctcctcctc 67
            ||||| ||||||||||||||||||
Sbjct: 3549 ccccctccttctctcctcctcctc 3572
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>gb|M26549.1|HUMCOL1A13 Human alpha-1 collagen type IV gene, exon 19
          Length = 400

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 44  cccccaccttctctcctcctcctc 67
           ||||| ||||||||||||||||||
Sbjct: 137 ccccctccttctctcctcctcctc 160


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,188,005
Number of Sequences: 3902068
Number of extensions: 4188005
Number of successful extensions: 104815
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101099
Number of HSP's gapped (non-prelim): 3716
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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