Clone Information

BLAST Search Result

Clone Name	bart52b06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FBX17_RAT (Q6AY27) F-box only protein 17	39	0.002
2	FBX17_MOUSE (Q9QZM8) F-box only protein 17 (F-box only protein 26)	39	0.003
3	FBX44_MOUSE (Q8BK26) F-box only protein 44 (F-box only protein 6a)	35	0.056
4	FBX6_HUMAN (Q9NRD1) F-box only protein 6 (F-box/G-domain protein 2)	35	0.056
5	FBX17_HUMAN (Q96EF6) F-box only protein 17 (F-box only protein 26)	34	0.073
6	FBX6_MOUSE (Q9QZN4) F-box only protein 6 (F-box only protein 6b)	34	0.073
7	FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leuci...	34	0.073
8	FBX44_HUMAN (Q9H4M3) F-box only protein 44 (F-box protein FBX30)...	33	0.12
9	FBX6_RAT (Q923V4) F-box only protein 6 (F-box only protein 6b) (...	33	0.16
10	IF2_PROAC (Q6A7M5) Translation initiation factor IF-2	33	0.21
11	FBX27_MACFA (Q9N0C8) F-box only protein 27	32	0.28
12	ERYA1_SACER (Q03131) Erythronolide synthase, modules 1 and 2 (EC...	32	0.47
13	FBX27_HUMAN (Q8NI29) F-box only protein 27 (F-box/G-domain prote...	31	0.62
14	FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leuc...	31	0.62
15	IF2_CORGL (Q8NP40) Translation initiation factor IF-2	31	0.62
16	IF2_PASMU (P57873) Translation initiation factor IF-2	31	0.62
17	FBX2_MOUSE (Q80UW2) F-box only protein 2	31	0.62
18	FBX27_MOUSE (Q6DIA9) F-box only protein 27	30	1.1
19	NEST_RAT (P21263) Nestin	30	1.1
20	CSP_PLACL (P08675) Circumsporozoite protein precursor (CS)	30	1.1
21	IE68_SHV21 (Q01042) Immediate-early protein	30	1.4
22	FBX2_HUMAN (Q9UK22) F-box only protein 2	30	1.4
23	GAK_RAT (P97874) Cyclin G-associated kinase (EC 2.7.11.1)	30	1.8
24	FGD3_MOUSE (O88842) FYVE, RhoGEF and PH domain-containing protein 3	30	1.8
25	MUC1_YEAST (P08640) Mucin-like protein 1 precursor	30	1.8
26	REG1_PYRAB (Q9V2M0) Putative HTH-type transcriptional regulator ...	30	1.8
27	IF2_CORJK (Q4JV51) Translation initiation factor IF-2	29	2.3
28	TRPA_HALVO (P18284) Tryptophan synthase alpha chain (EC 4.2.1.20)	29	3.1
29	VG48_SHV21 (Q01033) Hypothetical gene 48 protein	29	3.1
30	XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG pr...	29	3.1
31	TMPS9_RAT (P69526) Transmembrane protease, serine 9 (EC 3.4.21.-...	29	3.1
32	PGCA_PIG (Q29011) Aggrecan core protein (Cartilage-specific prot...	29	3.1
33	AMPH_HUMAN (P49418) Amphiphysin	28	4.0
34	MST1_SCHPO (O94446) Protein mst1	28	4.0
35	GPX42_RAT (Q91XR8) Phospholipid hydroperoxide glutathione peroxi...	28	4.0
36	CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)	28	4.0
37	EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear a...	28	4.0
38	YACK_RHIME (Q9X447) Hypothetical 80.6 kDa protein in ackA 5'regi...	28	4.0
39	LRC41_MOUSE (Q8K1C9) Leucine-rich repeat-containing protein 41 (...	28	4.0
40	SOP2_CAEEL (Q965H3) Polycomb protein sop-2 (Suppressor of pal-1 ...	28	4.0
41	GPX42_MOUSE (Q91XR9) Phospholipid hydroperoxide glutathione pero...	28	5.2
42	CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor	28	5.2
43	CAC1C_RABIT (P15381) Voltage-dependent L-type calcium channel al...	28	5.2
44	STAR8_HUMAN (Q92502) StAR-related lipid transfer protein 8 (StAR...	28	5.2
45	IF2_BURPS (Q63TP8) Translation initiation factor IF-2	28	5.2
46	IF2_BURP1 (Q3JSY9) Translation initiation factor IF-2	28	5.2
47	IF2_BURMA (Q62KK9) Translation initiation factor IF-2	28	5.2
48	IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2	28	6.8
49	PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakar...	28	6.8
50	CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel al...	28	6.8
51	CJ095_HUMAN (Q9H7T3) Protein C10orf95	28	6.8
52	CBX8_HUMAN (Q9HC52) Chromobox protein homolog 8 (Polycomb 3 homo...	28	6.8
53	TNNT2_BOVIN (P13789) Troponin T, cardiac muscle (TnTc) (Cardiac ...	28	6.8
54	SC5A5_MOUSE (Q99PN0) Sodium/iodide cotransporter (Na(+)/I(-) cot...	28	6.8
55	IF2_XANOR (Q5GXU9) Translation initiation factor IF-2	28	6.8
56	CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor	28	6.8
57	THLA_CLOAB (P45359) Acetyl-CoA acetyltransferase (EC 2.3.1.9) (A...	28	6.8
58	COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor	28	6.8
59	ADRM1_HUMAN (Q16186) Adhesion-regulating molecule 1 precursor (1...	28	6.8
60	SBCC_RHOCA (O68032) Nuclease sbcCD subunit C	28	6.8
61	CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? ...	28	6.8
62	LRC27_HUMAN (Q9C0I9) Leucine-rich repeat-containing protein 27	28	6.8
63	SLT_HAEIN (P44888) Putative soluble lytic murein transglycosylas...	27	8.9
64	CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)	27	8.9
65	IKBL_MACMU (Q5TM19) NF-kappa-B inhibitor-like protein 1 (Inhibit...	27	8.9
66	MMP9_CANFA (O18733) Matrix metalloproteinase-9 precursor (EC 3.4...	27	8.9
67	SSB_NEIMB (P66849) Single-stranded DNA-binding protein (SSB) (He...	27	8.9
68	SSB_NEIMA (P66848) Single-stranded DNA-binding protein (SSB) (He...	27	8.9
69	CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor	27	8.9
70	TESK2_RAT (Q924U5) Dual specificity testis-specific protein kina...	27	8.9
71	H1B_CHITE (P40276) Histone H1B	27	8.9

>FBX17_RAT (Q6AY27) F-box only protein 17|
          Length = 250

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +3

Query: 12  MRDPEAPSLVRLPEHVLLEILARVPGVADLFRCAAARKRWRDLVTEPS 155
           M + +  +L  LP  +LL++L+ VP  A + RC    + WRDLV  PS
Sbjct: 10  MTEAQHMALAELPPELLLQVLSHVPPRALVTRCRPVCRAWRDLVDGPS 57

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>FBX17_MOUSE (Q9QZM8) F-box only protein 17 (F-box only protein 26)|
          Length = 286

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = +3

Query: 9   EMRDPEAPSLVRLPEHVLLEILARVPGVADLFRCAAARKRWRDLVTEPS 155
           +M +    +L +LP  +L+++L+ VP  A + RC    + WRDLV  PS
Sbjct: 9   QMTEARRLALTKLPPELLVQVLSHVPPRALVTRCRPVCRAWRDLVDGPS 57

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>FBX44_MOUSE (Q8BK26) F-box only protein 44 (F-box only protein 6a)|
          Length = 255

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 45  LPEHVLLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 170
           LPE++LLE+   +P    L RC      WRDL+   +  +R+
Sbjct: 9   LPENILLELFIHIPARQLLLRCRPVCSLWRDLIDLVTLWKRK 50

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>FBX6_HUMAN (Q9NRD1) F-box only protein 6 (F-box/G-domain protein 2)|
          Length = 293

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 33  SLVRLPEHVLLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 170
           S+  LPE++LLE+   VP    L  C      WRDL+   +  +R+
Sbjct: 12  SINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRK 57

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>FBX17_HUMAN (Q96EF6) F-box only protein 17 (F-box only protein 26)|
          Length = 278

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +3

Query: 15  RDPEAPSLV--RLPEHVLLEILARVPGVADLFRCAAARKRWRDLVTEPS 155
           R P  PSL    LP  +L+++L+ VP  + + RC    + WRD+V  P+
Sbjct: 9   RLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPT 57

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>FBX6_MOUSE (Q9QZN4) F-box only protein 6 (F-box only protein 6b)|
          Length = 295

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 45  LPEHVLLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 170
           LPE++LLE+   +P    L  C    + WRDL+   S  +R+
Sbjct: 7   LPENILLELFIHIPAPQLLRNCRLVCRLWRDLIDVVSLWKRK 48

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>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat|
           protein 7) (F-box protein FBL6/FBL7)
          Length = 491

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 24  EAPSLVRLPEHVLLEILARVPGVADLFRCAAARKRWRDLVTEPSFLR 164
           E  S+ RLP+H +++I + +P    L RCA   +RW +L  +P   R
Sbjct: 110 EQASIDRLPDHSMVQIFSFLP-TNQLCRCARVCRRWYNLAWDPRLWR 155

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>FBX44_HUMAN (Q9H4M3) F-box only protein 44 (F-box protein FBX30)|
           (F-box/G-domain protein 3)
          Length = 255

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 45  LPEHVLLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 170
           LPE++LLE+   VP    L  C      WRDL+   +  +R+
Sbjct: 9   LPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRK 50

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>FBX6_RAT (Q923V4) F-box only protein 6 (F-box only protein 6b)|
           (F-box/G-domain protein 2)
          Length = 284

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 45  LPEHVLLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 170
           LPE++LLE+   VP    L  C      WRDL+   +  +R+
Sbjct: 7   LPENILLELFTHVPAPQLLRNCRLVCSLWRDLIDVMTLWKRK 48

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>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2|
          Length = 964

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
 Frame = -3

Query: 403 SAPKRTRSAPRCEASGTTRSSKRPAAPGTKE------PSRGRPGPRTDHGART 263
           + PK    AP+ +    ++S K  A PG +       PS  RPGPR   G RT
Sbjct: 155 NVPKPHAPAPKPKPGAPSKSPKPGARPGPRPGGSAGLPSAARPGPRPGAGRRT 207

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>FBX27_MACFA (Q9N0C8) F-box only protein 27|
          Length = 280

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +3

Query: 3   EIEMRDPEAPSLVRLPEHVLLEILARVPGVADLFRCAAARKRWRDLV 143
           E E    EA  L +LP  +LL +L+ VP    L RC    + WR LV
Sbjct: 17  EPESEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALV 63

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>ERYA1_SACER (Q03131) Erythronolide synthase, modules 1 and 2 (EC 2.3.1.94) (ORF|
            1) (6-deoxyerythronolide B synthase I) (DEBS 1)
          Length = 3491

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 29/78 (37%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = -2

Query: 293  GAEDRPR-RADEAGARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALAR 117
            G+ED+   RAD   ARR  PA  T  +E A  GG               LG EVA  LA 
Sbjct: 3024 GSEDQVAVRADAVRARRLSPAHVTATSEYAVPGGTILVTGGTAG-----LGAEVARWLA- 3077

Query: 116  GRAAEEVGDAGHAGQDLQ 63
            GR AE +      G D +
Sbjct: 3078 GRGAEHLALVSRRGPDTE 3095

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>FBX27_HUMAN (Q8NI29) F-box only protein 27 (F-box/G-domain protein 5)|
          Length = 283

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 9   EMRDPEAPSLVRLPEHVLLEILARVPGVADLFRCAAARKRWRDLV 143
           E    EA  L +LP  +LL +L+ VP    L RC    + WR LV
Sbjct: 17  EPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALV 61

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>FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat|
           protein 12) (F-box protein FBL12)
          Length = 326

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 33  SLVRLPEHVLLEILARVPGVADLFRCAAARKRWRDLVTE 149
           +LV LP+ VLLEI + +P V D  R +    RW+ LV +
Sbjct: 3   TLVELPDSVLLEIFSYLP-VRDRIRISRVCHRWKRLVDD 40

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>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 27/106 (25%), Positives = 37/106 (34%), Gaps = 5/106 (4%)
 Frame = -2

Query: 377 AAVRGERHDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPAL-----ATLPAE 213
           A   G R     +   G+R +G      GA+  P +  + G RRP PA+       +PA+
Sbjct: 270 AGAGGPRPQGGPRPQGGSRPQGGS--AQGAQGAPSQERQGGGRRPSPAMMPPTPGQMPAK 327

Query: 212 EADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDAGHAG 75
              +GG              R G     A   GR     G  G  G
Sbjct: 328 APGKGGRGGQAGGGAGGGFNRGGGTGGGAGRGGRRGGTAGAFGRPG 373

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>IF2_PASMU (P57873) Translation initiation factor IF-2|
          Length = 833

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -2

Query: 386 EERAAVRGER-HDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPALATLPAEE 210
           EE+A +  E+   A  +EA  A+   A       E   RRA+EA  RR    LA   AEE
Sbjct: 79  EEKARLEAEKAKQAKAEEAKKAQAVSAPTKAVDVEKEKRRAEEAELRRKADELARQKAEE 138

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>FBX2_MOUSE (Q80UW2) F-box only protein 2|
          Length = 297

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 36  LVRLPEHVLLEILARVPGVADLFRCAAARKRWRDLVT-EPSFLRRRWPEG 182
           L  LPE +LL +LA +P    +  C     RW++LV   P +L +   EG
Sbjct: 51  LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEG 100

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>FBX27_MOUSE (Q6DIA9) F-box only protein 27|
          Length = 280

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 18  DP-EAPSLVRLPEHVLLEILARVPGVADLFRCAAARKRWRDLV 143
           DP E   L RLP  +LL +L+ VP    L  C    + WR LV
Sbjct: 16  DPQEVLDLSRLPPELLLLVLSHVPPRTLLMHCRRVCRAWRALV 58

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>NEST_RAT (P21263) Nestin|
          Length = 1805

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 32/124 (25%), Positives = 44/124 (35%), Gaps = 18/124 (14%)
 Frame = -2

Query: 392  AHEERAAVRGERHDAVVQEA-SGAR--DEGAKQGTTGAEDRPRRADEA------------ 258
            A EE +   GE  DA  + A SGA+    GA  G    +D  +R D              
Sbjct: 1602 ADEEESGEEGEEEDADEEGAESGAQWWGSGASGGGCKVQDIAQRGDPVQESVGVSGLWDD 1661

Query: 257  ---GARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDA 87
               GA    PAL  +  + A+  G           +EG++ D +            VGDA
Sbjct: 1662 GLRGAAANVPALEMVSQDSAEPSGSEESESASLEGEEGQVTDHLDAPQEVTSMVPGVGDA 1721

Query: 86   GHAG 75
               G
Sbjct: 1722 FDIG 1725

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>CSP_PLACL (P08675) Circumsporozoite protein precursor (CS)|
          Length = 378

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 37/113 (32%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
 Frame = -2

Query: 401 GAEAHEERAAVRGERHDAVVQEASGARDEGAKQGTTG--AEDRPRRADEAGARRPFPALA 228
           GA A +   A  G R     + A GAR E   +   G  AED  R AD  GAR    A A
Sbjct: 118 GARAEDGARAADGARAADGARAADGARAEDGARAEDGARAEDGARAAD--GARAADGARA 175

Query: 227 TLPAEEAD--EGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDAGHAG 75
              A  AD               A +G   ++ APA  R     E G AG  G
Sbjct: 176 ADGARAADGARAADGARAADGARAADGARAEDGAPAGNR-----EGGQAGAGG 223

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>IE68_SHV21 (Q01042) Immediate-early protein|
          Length = 407

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 33/134 (24%), Positives = 47/134 (35%), Gaps = 12/134 (8%)
 Frame = -2

Query: 398 AEAHEERAAVRGERHDAVVQEASGARDEGAKQGTTGAEDRP------------RRADEAG 255
           AEA EE A    E  +A  +EA  A +E A++    AE+                A+E  
Sbjct: 126 AEAEEEEA----EEEEAEEEEAEEAEEEEAEEAEEEAEEEEAEEEAEEEAEEAEEAEEEA 181

Query: 254 ARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDAGHAG 75
                 A     AEEA+E             +E    +E   A     A EE  +A    
Sbjct: 182 EEEAEEAEEAEEAEEAEEEAEEAEEEAEEAEEEAEEAEEAEEA---EEAEEEAEEAEEEE 238

Query: 74  QDLQQDMLRQPHQR 33
           ++      R PH +
Sbjct: 239 EEAGPSTPRLPHYK 252

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>FBX2_HUMAN (Q9UK22) F-box only protein 2|
          Length = 296

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 27  APSLVRLPEHVLLEILARVPGVADLFRCAAARKRWRDLVT-EPSFLRRRWPEG 182
           A  L  LPE +LL +LA +P    +  C     RW++LV   P +L +   EG
Sbjct: 44  AAYLDELPEPLLLRVLAALPAAELVQACRLVCLRWKELVDGAPLWLLKCQQEG 96

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>GAK_RAT (P97874) Cyclin G-associated kinase (EC 2.7.11.1)|
          Length = 1305

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 361  SGTTRSSKRPAAPGTKEPSRGRPGPRTDHGART 263
            S ++  + RP APGT  P + +P PR     R+
Sbjct: 1114 SNSSWQTTRPTAPGTSWPPQAKPAPRASEQLRS 1146

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>FGD3_MOUSE (O88842) FYVE, RhoGEF and PH domain-containing protein 3|
          Length = 733

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
 Frame = -2

Query: 404 LGAEAHEERAAVRGERHDAVVQEASGA-----RDEGAKQGTTGAEDRPRRADEAGARRPF 240
           +G  AH    +      D+  +E SGA     RD G    ++         +E+    P 
Sbjct: 38  IGPGAHRGAHSSSAPAGDSSTREPSGAMKIPNRDSGIDSPSSSVASENFPCEESSEGSPS 97

Query: 239 PALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEV 96
           PA+  LP+E A +             ++  +G+E  P +   R  E+V
Sbjct: 98  PAILGLPSETASD--SRVPQDNPQEEEDSGVGEEPDPKVTLFRPQEDV 143

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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 292 PVVPCLAPSSRAPLASWTTASCRSPRTAARSSCASAP 402
           PV      SS AP+ S TT S  +P T++ +  +SAP
Sbjct: 421 PVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAP 457



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 292 PVVPCLAPSSRAPLASWTTASCRSPRTAARSSCASAP 402
           PV      SS AP+ S TT S  +P T++ +  +SAP
Sbjct: 409 PVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAP 445

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>REG1_PYRAB (Q9V2M0) Putative HTH-type transcriptional regulator PYRAB00550|
          Length = 155

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
 Frame = +3

Query: 3   EIEMRDPEAPSLVRLPEHVLLEILARVPGVADLFRCA-----AARKRWRDLVTEPSFLR 164
           E+E+ DPEAP L +     +L+ + R+  ++D+++ +     A R  +RD+ +  SFL+
Sbjct: 71  EVELVDPEAPDLAK-----VLQPILRMRNISDVYKKSGEFQLAIRGTFRDVDSLNSFLK 124

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>IF2_CORJK (Q4JV51) Translation initiation factor IF-2|
          Length = 922

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 7/116 (6%)
 Frame = -2

Query: 401 GAEAHEERAAVRGERHDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPAL--- 231
           GA A       RG +         G+R  GAK+    A  +P  A + G RRP PA+   
Sbjct: 179 GAPAERPAPRPRGGQAGPGDMPRPGSRPGGAKK----AGPKPGGAKQGGGRRPSPAMMPS 234

Query: 230 ----ATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDAGHAG 75
               A +P++  + GG           + GR G    P    G      G  G  G
Sbjct: 235 HPNPAQMPSKSDNFGG--------GRGRGGRHGGPGGPGGPGGPGGPRGGRGGRRG 282

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>TRPA_HALVO (P18284) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 277

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 25/97 (25%), Positives = 34/97 (35%), Gaps = 4/97 (4%)
 Frame = -2

Query: 368 RGERHDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARR----PFPALATLPAEEADE 201
           RGER D ++++ SG     A+ GTTGA+       ++   R      P        + D 
Sbjct: 154 RGERLDRIMEQVSGYVYVQARLGTTGAQSSVSDQTDSSLERLTDYDVPKAVGFGISDGDH 213

Query: 200 GGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGD 90
                            L D VA     G  AE V D
Sbjct: 214 AERIVASGADGIIVGSALVDIVAEGHENGDDAETVAD 250

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>VG48_SHV21 (Q01033) Hypothetical gene 48 protein|
          Length = 797

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/91 (24%), Positives = 30/91 (32%)
 Frame = -2

Query: 341 QEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPALATLPAEEADEGGXXXXXXXXXXA 162
           +E     D+G  +G    ED     DE               +E ++ G           
Sbjct: 432 EEGEDEGDDGEDEGEDEGEDEGDEGDEG--------------DEGEDEGEDEDDEEDEGE 477

Query: 161 QEGRLGDEVAPALARGRAAEEVGDAGHAGQD 69
            EG  GDE       G   E+ GD G  G+D
Sbjct: 478 DEGDEGDEGEDEGDEGDEGEDEGDEGDEGKD 508

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>XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG protein)|
          Length = 439

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 30/107 (28%), Positives = 33/107 (30%)
 Frame = -2

Query: 398 AEAHEERAAVRGERHDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPALATLP 219
           AE      A  G    A  +  + A  EG       AE       + GA  P PA    P
Sbjct: 32  AEGVAPAPAEGGAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADGGAPAPAPAEGGAP 91

Query: 218 AEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDAGHA 78
           A    EGG          A     G   APA A G A       G A
Sbjct: 92  APAPAEGGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPAPAEGEA 138

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>TMPS9_RAT (P69526) Transmembrane protease, serine 9 (EC 3.4.21.-)|
           (Polyserase-1) (Polyserine protease 1) (Polyserase-I)
           [Contains: Serase-1; Serase-2; Serase-3]
          Length = 1061

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +1

Query: 292 PVVPCLAPSSRAPLASW-TTASCRSPRTAARSSCASAP 402
           PVVP  AP+   P   W T+   R P T A+ + A  P
Sbjct: 443 PVVPTEAPAPITPSTPWPTSPESRVPNTTAKPTVAPTP 480

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>PGCA_PIG (Q29011) Aggrecan core protein (Cartilage-specific proteoglycan|
           core protein) (CSPCP) (Fragments)
          Length = 537

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 353 DAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPALATLPAEE 210
           D VVQ  S A +EG  +G +  E      +   + +PFP+    P+EE
Sbjct: 447 DLVVQVTSAATEEGT-EGPSATEAPSTSEEPFPSEKPFPSEEPFPSEE 493

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>AMPH_HUMAN (P49418) Amphiphysin|
          Length = 695

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = -2

Query: 395 EAHEERAAVRGER--HDAVVQEASGARDEGAKQGTTGAEDRPRRADEA--GARRPFPALA 228
           EA E  A V  E+     V++ AS   +EG  + T GAE +    D A  G     P LA
Sbjct: 526 EAEELEATVPQEKVIPSVVIEPASNHEEEGENEITIGAEPKETTEDAAPPGPTSETPELA 585

Query: 227 T 225
           T
Sbjct: 586 T 586

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>MST1_SCHPO (O94446) Protein mst1|
          Length = 463

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 394 KRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPGPRTDHGA 269
           KR ++  R   S T  S   P+ P T++P    P   +DHG+
Sbjct: 97  KRPKAVDR-RRSITAPSKTEPSTPSTEKPEPSTPSGESDHGS 137

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>GPX42_RAT (Q91XR8) Phospholipid hydroperoxide glutathione peroxidase, nuclear|
           (EC 1.11.1.12) (GPX-4)
          Length = 253

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 385 RSAPRCEASGTTRSSKRPAAPGTKEPSRGRPGPR 284
           R   RC   G +   +R   PG + P R RPGPR
Sbjct: 7   RKRGRCRQRGRSPGGRRRREPGRQSP-RKRPGPR 39

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>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)|
          Length = 1027

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 25/94 (26%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
 Frame = -2

Query: 335 ASGARDEGAKQGTTGAEDRPRRADEAGARRPFPALATLPAEEADEGGXXXXXXXXXXAQE 156
           A G + +  K G TGA   P  A   GAR P       P     +G            + 
Sbjct: 434 AHGEQGDAGKDGETGAAGPPGAAGPTGARGP-------PGPRGQQGFQGLAGAQGTPGEA 486

Query: 155 GRLGDEVA-----PALARGRAAEE--VGDAGHAG 75
           G+ G+  A     P+   G   E    GD G+ G
Sbjct: 487 GKTGERGAVGATGPSGPAGPGGERGAPGDRGNVG 520

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>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)|
           (EBNA-1)
          Length = 641

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -3

Query: 391 RTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPGPRTDHGAR 266
           R  S  R    G  R  KRP +P ++  S G P  R   G R
Sbjct: 362 RGGSRERARGRGRGRGEKRPRSPSSQSSSSGSPPRRPPPGRR 403

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>YACK_RHIME (Q9X447) Hypothetical 80.6 kDa protein in ackA 5'region (ORFA)|
          Length = 733

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 264 VRAPWSVLGPGRPLLGSFVPGAAGLLDDRVVPLA 365
           +R  + V GPG P++ ++V  AAGL+ D   P+A
Sbjct: 488 LRLQYEVFGPGNPVM-AWVEAAAGLIRDARQPVA 520

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>LRC41_MOUSE (Q8K1C9) Leucine-rich repeat-containing protein 41 (Protein Muf1)|
          Length = 785

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
 Frame = -3

Query: 382 SAPRCEASGTTRSSKRPAAPGTKEP--------SRGRPGPRTDHGARTKLE 254
           SAP   ++ ++ SSKR  A    +P        + G+ GPRT  G+  + E
Sbjct: 334 SAPAAASASSSTSSKRAPASSASQPKPLKRFKRAAGKKGPRTRQGSGAESE 384

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>SOP2_CAEEL (Q965H3) Polycomb protein sop-2 (Suppressor of pal-1 protein 2)|
          Length = 735

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 9/47 (19%)
 Frame = -3

Query: 397 PKRTRSAPRCEASGTTRSS---------KRPAAPGTKEPSRGRPGPR 284
           PKR+ +AP   A+ TT+ +           PA P T   S  R  PR
Sbjct: 465 PKRSEAAPEVPATATTKEAPPSTSSSPPDAPATPATPASSDSRDSPR 511

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>GPX42_MOUSE (Q91XR9) Phospholipid hydroperoxide glutathione peroxidase, nuclear|
           (EC 1.11.1.12) (GPX-4)
          Length = 253

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 385 RSAPRCEASGTTRSSKRPAAPGTKEPSRGRPGPR 284
           R   RC   G +   +R   PG + P R RPGPR
Sbjct: 7   RKRGRCRQRGGSPRGRRRRGPGRQSP-RKRPGPR 39

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>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = -2

Query: 368 RGERHDAVVQEASGARDEGAKQGT---TGAEDRPRRADEAGA 252
           RGER +A +    GA+ E  K G+    GA   P  A E GA
Sbjct: 446 RGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGA 487

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>CAC1C_RABIT (P15381) Voltage-dependent L-type calcium channel alpha-1C subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.2)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 1,
            cardiac muscle) (Smooth muscle calcium channel blocker
            receptor)
          Length = 2171

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 302  GTTGAEDRPRRADEAGARRPFPALATLPAEEADEG 198
            G+   E+ P R D + ARR  P   T+P++   +G
Sbjct: 2023 GSWSGENSPCRGDSSAARRARPVSLTVPSQAGAQG 2057

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>STAR8_HUMAN (Q92502) StAR-related lipid transfer protein 8 (StARD8) (START|
           domain-containing protein 8)
          Length = 1023

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
 Frame = -2

Query: 305 QGTTGAEDRPRRADEAGARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPA 126
           Q    AE   +   EA A  P PA A    +EA  GG           +   + D VA +
Sbjct: 389 QAPAEAEPVAQEEAEAPAPAPAPAPAQDSEQEAHSGGEPTFASSLSVEEGHSISDTVASS 448

Query: 125 LARGRAAEEVGDAGHAG--QDLQQDMLRQPHQRG 30
                +   + +A  AG    LQ  M R+    G
Sbjct: 449 SELDSSGNSMNEAEAAGPLAGLQASMPRERRDSG 482

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>IF2_BURPS (Q63TP8) Translation initiation factor IF-2|
          Length = 975

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
 Frame = -3

Query: 397 PKRTRSAPRCEASGTTRSSKRPAA------PGTKEPSRGRPGP-RTDHGARTK 260
           P    +A   EA GT     +PA       P  K+P+ G P P     G RTK
Sbjct: 282 PAEPPAAKAAEAKGTLHKPAKPAGEAAAARPAAKKPASGAPAPAAAPAGDRTK 334

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>IF2_BURP1 (Q3JSY9) Translation initiation factor IF-2|
          Length = 975

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
 Frame = -3

Query: 397 PKRTRSAPRCEASGTTRSSKRPAA------PGTKEPSRGRPGP-RTDHGARTK 260
           P    +A   EA GT     +PA       P  K+P+ G P P     G RTK
Sbjct: 282 PAEPPAAKAAEAKGTLHKPAKPAGEAAAARPAAKKPASGAPAPAAAPAGDRTK 334

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>IF2_BURMA (Q62KK9) Translation initiation factor IF-2|
          Length = 975

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
 Frame = -3

Query: 397 PKRTRSAPRCEASGTTRSSKRPAA------PGTKEPSRGRPGP-RTDHGARTK 260
           P    +A   EA GT     +PA       P  K+P+ G P P     G RTK
Sbjct: 282 PAEPPAAKAAEAKGTLHKPAKPAGEAAAARPAAKKPASGAPAPAAAPAGDRTK 334

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>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2|
          Length = 954

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -3

Query: 403 SAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPGPRTDHGAR 266
           SAP  T S+    A+   ++S  PA+   + P+ G P PR   GAR
Sbjct: 71  SAPASTSSSAPTPAAPARQAS--PASAHQQAPTPGAPTPRPQGGAR 114

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>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte|
           stimulating factor) (Superficial zone proteoglycan)
           [Contains: Proteoglycan-4 C-terminal part]
          Length = 1404

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
 Frame = -3

Query: 400 APKRTRSAPRCEASGTTRSSKRPAAPGTKEP---SRGRPGPRTDHGART 263
           AP  T+SAP         ++K PA    KEP   +   P P T   A T
Sbjct: 382 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT 430

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>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = -2

Query: 392  AHEERAAVRGERHDAVVQEASGARDEGAKQGTTGAEDRPRRAD--EAGARRPFPALATLP 219
            A  E    R  RH    +E +GA+ E   +   G    PR A+  E  ARR        P
Sbjct: 928  AEREPRRHRAHRHQDPSKECAGAKGERRARHRGGPRAGPREAESGEEPARRHRARHKAQP 987

Query: 218  AEEADE 201
            A EA E
Sbjct: 988  AHEAVE 993

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>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 292 PVVPCLAPSSRAPLASWTTASCRSPRTAARSSCASAP 402
           P   C +PS+ A        +C SP TA   +C + P
Sbjct: 199 PAPTCASPSAAASSCCRRRRACSSPTTAWSGACGAGP 235

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>CBX8_HUMAN (Q9HC52) Chromobox protein homolog 8 (Polycomb 3 homolog) (Pc3)|
           (HPC3) (Rectachrome 1)
          Length = 389

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 394 KRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPGPRTD 278
           +R R   R    GT+R   +P++PG     RG P PR +
Sbjct: 169 ERERERERERERGTSRVDDKPSSPGDSSKKRG-PKPRKE 206

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>TNNT2_BOVIN (P13789) Troponin T, cardiac muscle (TnTc) (Cardiac muscle troponin|
           T) (cTnT)
          Length = 284

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
 Frame = -2

Query: 395 EAHEERAAVRGERHDAVVQEASGARDEGAKQGTT--GAEDRPRRADEAGAR----RPFPA 234
           E +EE+     E H+  V+E +G   E  +  T   G E+  R A++        +P P 
Sbjct: 8   EEYEEQEEAAEEEHEEAVEEEAGGEAEAGEPCTAEDGEEEEGREAEDGPVEEFKPKPRPF 67

Query: 233 LATLPAEEADEG 198
           +  L   +  +G
Sbjct: 68  MPNLVPPKIPDG 79

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>SC5A5_MOUSE (Q99PN0) Sodium/iodide cotransporter (Na(+)/I(-) cotransporter)|
           (Sodium-iodide symporter) (Na(+)/I(-)-symporter)
          Length = 618

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 364 ASGTTRSSKRPAAPGTKEPSRGRPGPRTDHG 272
           A+G T +S  P+ PG    SRG P    D G
Sbjct: 480 AAGCTNASVLPSPPGAANTSRGIPSSGMDSG 510

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>IF2_XANOR (Q5GXU9) Translation initiation factor IF-2|
          Length = 906

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
 Frame = -3

Query: 403 SAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSR-----GRPGPRTDHGARTKLEXXXXX 239
           +AP  + +AP   A  +  S+ RP+ PG   P+       RP  R ++ A+ K       
Sbjct: 193 AAPTPSAAAPAARAPSSPSSAPRPSRPGGASPASRPSTPARPDDR-NNAAKHKTRGSHVM 251

Query: 238 XXXXXXXXXXXXREEQWHAPSGQRRRRKD 152
                          Q H  +  R RR +
Sbjct: 252 VAGVEDDDATKRFAGQLHLSAADRARRSN 280

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>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 37/141 (26%), Positives = 49/141 (34%), Gaps = 16/141 (11%)
 Frame = -2

Query: 401 GAEAHEERAAVRGERHDAVVQEASGARDEGAKQGT---TGAEDRPRRADEAGA--RRPFP 237
           GA  ++     +GE   A VQ   G   E  K+G     G    P  A E GA   R FP
Sbjct: 426 GAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFP 485

Query: 236 ---ALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAE--------EVGD 90
               +A       + G            + GR G+   P  A+G            + G 
Sbjct: 486 GADGIAGPKGPPGERGSPGAVGPKGSPGEAGRPGEAGLPG-AKGLTGSPGSPGPDGKTGP 544

Query: 89  AGHAGQDLQQDMLRQPHQRGR 27
            G AGQD +      P  RG+
Sbjct: 545 PGPAGQDGRPGPAGPPGARGQ 565

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>THLA_CLOAB (P45359) Acetyl-CoA acetyltransferase (EC 2.3.1.9) (Acetoacetyl-CoA|
           thiolase)
          Length = 392

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -2

Query: 215 EEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGD 90
           EE DE             + G+  DE+ P + +GR  E V D
Sbjct: 173 EEQDEFALASQKKAEEAIKSGQFKDEIVPVVIKGRKGETVVD 214

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>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 29/117 (24%), Positives = 39/117 (33%), Gaps = 5/117 (4%)
 Frame = -2

Query: 365  GERHDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPF-----PALATLPAEEADE 201
            GER     Q A G +     QG  G    P     AGA  P      P     P    ++
Sbjct: 1028 GERGLPGAQGAPGLKGGEGPQGPQGPVGSPGERGSAGAAGPIGLPGRPGPQGPPGPAGEK 1087

Query: 200  GGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDAGHAGQDLQQDMLRQPHQRG 30
            G            ++G  G    P  A        G AG  G+D  +  + +P Q+G
Sbjct: 1088 GAPGEKGPQGPAGRDGVQGPVGLPGPA--------GPAGSPGEDGDKGEIGEPGQKG 1136

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>ADRM1_HUMAN (Q16186) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110)
          Length = 407

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -3

Query: 403 SAPKRTRSAPRCEASGT--TRSSKRPAAPGTKEPSRGRPGPRTDHGART 263
           S+  R++SA    +S T  TR++  P+AP     +   P P + +GA T
Sbjct: 206 SSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGAST 254

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>SBCC_RHOCA (O68032) Nuclease sbcCD subunit C|
          Length = 1238

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = -2

Query: 404 LGAEAHEERAAVRGERHDA--VVQEASGARDEGAKQGTTGAEDRPRRADEAGARR 246
           L      ++AA RG    A   +  A GAR     +GT  AED+ R    A A R
Sbjct: 633 LAERLRADQAAARGAAQAARDALTAAQGARATAEARGTQAAEDQRRAQTRAEAAR 687

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>CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)|
           (Zinc finger protein Cezanne 2) (OTU domain-containing
           protein 7)
          Length = 926

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
 Frame = -3

Query: 394 KRTRSAPRCEASGTT-----RSSKRPAAPGTKEPSRGRPGP 287
           +R R A    A+ T      R ++RP A G   P R  PGP
Sbjct: 674 QRRRDAAAAAAAATATATVKRPARRPEAEGAPGPERASPGP 714

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>LRC27_HUMAN (Q9C0I9) Leucine-rich repeat-containing protein 27|
          Length = 530

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 282 VLGPGRPLLGSFVPGAAGLLDDRVVPL 362
           +L P R ++ S +P A  L+D+R VPL
Sbjct: 383 LLPPRRSMVASKIPSATDLIDNRKVPL 409

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>SLT_HAEIN (P44888) Putative soluble lytic murein transglycosylase precursor|
           (EC 3.2.1.-)
          Length = 593

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +3

Query: 9   EMRDPEAPSLVRLPEHVLLEILARVPGVADLFRCAAARKRWRDLVTEPSF 158
           ++  P APS  +  +    ++ A +  + +L R   A++RWR L+    F
Sbjct: 339 QLNVPIAPSFTQAEQLPFKQVFAMITELRELGRNGLAKQRWRILLDNVDF 388

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>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)|
          Length = 779

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 26/97 (26%), Positives = 34/97 (35%), Gaps = 9/97 (9%)
 Frame = -2

Query: 332 SGARDEGAKQGTTGAEDRPRRADEAGAR--RPFPALATLPAEEADEGGXXXXXXXXXXAQ 159
           +G   E  ++G  GAE  P R    GA+  R     A  P      G             
Sbjct: 568 AGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGAPGPPGAPGAPGPVGPAGKSGD 627

Query: 158 EGRLG-----DEVAPALARGRAAEE--VGDAGHAGQD 69
            G  G       V PA ARG A  +   G+ G  G++
Sbjct: 628 RGETGPAGPIGPVGPAGARGPAGPQGPRGBKGZTGZZ 664

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>IKBL_MACMU (Q5TM19) NF-kappa-B inhibitor-like protein 1 (Inhibitor of kappa|
           B-like) (I-kappa-B-like) (IkappaBL) (Nuclear factor of
           kappa light polypeptide gene enhancer in B-cells
           inhibitor-like 1)
          Length = 381

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 391 RTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPGPRTDH 275
           R R+  + E    +R+ +   A G +EP   R GPR +H
Sbjct: 247 RERARVKEEELRESRARRAQEALGDREPKPARAGPRAEH 285

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>MMP9_CANFA (O18733) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)|
           (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase)
           (Gelatinase B) (GELB)
          Length = 704

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 355 TTRSSKRPAAPGTKEPSRGRPGPRT 281
           TTR S+RP A  T  P+ G  GP T
Sbjct: 471 TTRPSERPTAGPTGPPAAGPTGPPT 495

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>SSB_NEIMB (P66849) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 174

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -2

Query: 341 QEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPALATLPAEEADE 201
           QEA     + ++Q  + A   P+ A  A  R+P PA A  P E+ D+
Sbjct: 126 QEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVPAAA--PVEDIDD 170

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>SSB_NEIMA (P66848) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 174

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -2

Query: 341 QEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPALATLPAEEADE 201
           QEA     + ++Q  + A   P+ A  A  R+P PA A  P E+ D+
Sbjct: 126 QEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVPAAA--PVEDIDD 170

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>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor|
          Length = 1355

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 28/101 (27%), Positives = 33/101 (32%)
 Frame = -2

Query: 377 AAVRGERHDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPALATLPAEEADEG 198
           A + GER  A      G + +    G  G   R      AGA    P  A  P +  + G
Sbjct: 630 AGIPGERGTAGTPGTKGEKGDAGNSGDYGNPGRDGARGPAGAAGA-PGPAGGPGDRGESG 688

Query: 197 GXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDAGHAG 75
                         G  G E  PA   G A    G AGH G
Sbjct: 689 PAGPSGVAGPRGAPGERG-EAGPAGPTGFAGPP-GAAGHTG 727

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>TESK2_RAT (Q924U5) Dual specificity testis-specific protein kinase 2 (EC|
           2.7.12.1) (Testicular protein kinase 2)
          Length = 570

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
 Frame = +3

Query: 57  VLLEILARVPGVADLFRC----AAARKRWRDLVTEPSFLRRRWPEGAC 188
           ++ ++ A  PG   L  C    A + +RWR L   P FL +  P   C
Sbjct: 426 LVFDLDAPGPGTVSLADCQEPLAPSSRRWRSLPGSPEFLHQACPFVGC 473

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>H1B_CHITE (P40276) Histone H1B|
          Length = 232

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -3

Query: 403 SAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPS 305
           +APK  ++AP+ +A+ T    KR AAP  K+P+
Sbjct: 185 AAPK-PKAAPKPKAAKTETKPKRAAAPKAKKPA 216


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,866,764
Number of Sequences: 219361
Number of extensions: 668383
Number of successful extensions: 3704
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 3324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3681
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result