ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart52b03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein, complete cds Length = 1053 Score = 670 bits (338), Expect = 0.0 Identities = 406/426 (95%), Gaps = 2/426 (0%) Strand = Plus / Plus Query: 38 aggagaaggagcaggcggcgggggtgcccgaagaggagaagcacggcgacctagcccgag 97 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct: 27 aggagaaggagcaggcggcggcggtgcgcgaagagaagaagcacggcgacctagcccgag 86 Query: 98 ctcgcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcat 157 || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 87 cttgcaaccatggcgaggggtttgaagaagcatctcaagaggctcaatgccccgtctcac 146 Query: 158 tggatgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 217 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 tggatgctggacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 206 Query: 218 gccagggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacg 277 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 gccagggagtgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacc 266 Query: 278 taccgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgc 337 ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 267 taccgtgaagtgcaatctatcctgatgcagcgtcacatcatggttgatggaaaggtccga 326 Query: 338 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 397 |||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| Sbjct: 327 actgacaagacctaccctgctggtttcatggatatcatttccattcccaagactggtgag 386 Query: 398 aactacaggcttctgtatngacacc-agggccgcttccgccttcactctgtcagggatga 456 |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| Sbjct: 387 aactacaggcttctgtat-gacaccaagggccgcttccgcctgcactctgtcagggatga 445 Query: 457 ggatgc 462 |||||| Sbjct: 446 ggatgc 451
>dbj|AK103949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B09, full insert sequence Length = 1016 Score = 412 bits (208), Expect = e-112 Identities = 352/398 (88%), Gaps = 2/398 (0%) Strand = Plus / Plus Query: 77 agcacggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaag 136 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 66 agcacggcgacctagcccgacctcgcaaccatggcaaggggtttgaagaagcatctgaag 125 Query: 137 aggctcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaag 196 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 126 aggctcaatgcgcccaagcattggatgctcgacaagcttggtggagcttttgcccccaag 185 Query: 197 ccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaac 256 ||||| ||||||||||||||| ||||||| |||||||||||||||||||| | |||||| Sbjct: 186 ccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcattatcaggaac 245 Query: 257 agactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgtcatatt 316 || || || |||||||| || |||||||| || |||||||| |||||||| ||| | Sbjct: 246 aggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcagcgccatgtc 305 Query: 317 atggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatt 376 |||||||||| |||||| | ||||||||||||||||| |||||||||||||| | ||| Sbjct: 306 ttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatggatgtcatt 365 Query: 377 tctattcccaagactggtgagaactacaggcttctgtatngacacc-agggccgcttccg 435 || || |||||||||||||||||||||||||||||||| |||||| |||| || ||||| Sbjct: 366 tccatccccaagactggtgagaactacaggcttctgta-cgacaccaagggacgtttccg 424 Query: 436 ccttcactctgtcagggatgaggatgctaagntcaagc 473 |||||| ||||||| |||||||||||||||| |||||| Sbjct: 425 ccttcagtctgtcaaggatgaggatgctaagttcaagc 462
>dbj|AK102423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093E13, full insert sequence Length = 1157 Score = 412 bits (208), Expect = e-112 Identities = 352/398 (88%), Gaps = 2/398 (0%) Strand = Plus / Plus Query: 77 agcacggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaag 136 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 70 agcacggcgacctagcccgacctcgcaaccatggcaaggggtttgaagaagcatctgaag 129 Query: 137 aggctcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaag 196 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 130 aggctcaatgcgcccaagcattggatgctcgacaagcttggtggagcttttgcccccaag 189 Query: 197 ccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaac 256 ||||| ||||||||||||||| ||||||| |||||||||||||||||||| | |||||| Sbjct: 190 ccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcattatcaggaac 249 Query: 257 agactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgtcatatt 316 || || || |||||||| || |||||||| || |||||||| |||||||| ||| | Sbjct: 250 aggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcagcgccatgtc 309 Query: 317 atggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatt 376 |||||||||| |||||| | ||||||||||||||||| |||||||||||||| | ||| Sbjct: 310 ttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatggatgtcatt 369 Query: 377 tctattcccaagactggtgagaactacaggcttctgtatngacacc-agggccgcttccg 435 || || |||||||||||||||||||||||||||||||| |||||| |||| || ||||| Sbjct: 370 tccatccccaagactggtgagaactacaggcttctgta-cgacaccaagggacgtttccg 428 Query: 436 ccttcactctgtcagggatgaggatgctaagntcaagc 473 |||||| ||||||| |||||||||||||||| |||||| Sbjct: 429 ccttcagtctgtcaaggatgaggatgctaagttcaagc 466
>dbj|AK061776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D06, full insert sequence Length = 1079 Score = 412 bits (208), Expect = e-112 Identities = 352/398 (88%), Gaps = 2/398 (0%) Strand = Plus / Plus Query: 77 agcacggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaag 136 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 62 agcacggcgacctagcccgacctcgcaaccatggcaaggggtttgaagaagcatctgaag 121 Query: 137 aggctcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaag 196 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122 aggctcaatgcgcccaagcattggatgctcgacaagcttggtggagcttttgcccccaag 181 Query: 197 ccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaac 256 ||||| ||||||||||||||| ||||||| |||||||||||||||||||| | |||||| Sbjct: 182 ccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcattatcaggaac 241 Query: 257 agactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgtcatatt 316 || || || |||||||| || |||||||| || |||||||| |||||||| ||| | Sbjct: 242 aggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcagcgccatgtc 301 Query: 317 atggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatt 376 |||||||||| |||||| | ||||||||||||||||| |||||||||||||| | ||| Sbjct: 302 ttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatggatgtcatt 361 Query: 377 tctattcccaagactggtgagaactacaggcttctgtatngacacc-agggccgcttccg 435 || || |||||||||||||||||||||||||||||||| |||||| |||| || ||||| Sbjct: 362 tccatccccaagactggtgagaactacaggcttctgta-cgacaccaagggacgtttccg 420 Query: 436 ccttcactctgtcagggatgaggatgctaagntcaagc 473 |||||| ||||||| |||||||||||||||| |||||| Sbjct: 421 ccttcagtctgtcaaggatgaggatgctaagttcaagc 458
>emb|Y15009.1|OSY15009 Oryza sativa mRNA for ribosomal protein S4 Length = 1148 Score = 404 bits (204), Expect = e-109 Identities = 351/398 (88%), Gaps = 2/398 (0%) Strand = Plus / Plus Query: 77 agcacggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaag 136 ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 36 agcacggtgacctagcccgacctcgcaaccatggcaaggggtttgaagaagcatctgaag 95 Query: 137 aggctcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaag 196 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 96 aggctcaatgcgcccaagcattggatgctcgacaagcttggtggagcttttgcccccaag 155 Query: 197 ccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaac 256 ||||| ||||||||||||||| ||||||| |||||||||||||||||||| | |||||| Sbjct: 156 ccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcattatcaggaac 215 Query: 257 agactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgtcatatt 316 || || || |||||||| || |||||||| || |||||||| |||||||| ||| | Sbjct: 216 aggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcagcgccatgtc 275 Query: 317 atggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatt 376 |||||||||| |||||| | ||||||||||||||||| |||||||||||||| | ||| Sbjct: 276 ttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatggatgtcatt 335 Query: 377 tctattcccaagactggtgagaactacaggcttctgtatngacacc-agggccgcttccg 435 || || |||||||||||||||||||||||||||||||| |||||| |||| || ||||| Sbjct: 336 tccatccccaagactggtgagaactacaggcttctgta-cgacaccaagggacgtttccg 394 Query: 436 ccttcactctgtcagggatgaggatgctaagntcaagc 473 |||||| ||||||| |||||||||||||||| |||||| Sbjct: 395 ccttcagtctgtcaaggatgaggatgctaagttcaagc 432
>dbj|AK061826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C06, full insert sequence Length = 1035 Score = 347 bits (175), Expect = 2e-92 Identities = 341/394 (86%), Gaps = 2/394 (0%) Strand = Plus / Plus Query: 81 cggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaagaggc 140 ||||||| |||| |||||||||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 62 cggcgacgtagctcgagctcgcaaccatggcgaggggattgaagaagcatctcaagaggc 121 Query: 141 tcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaagccat 200 ||||||| || || |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 122 tcaatgcgcccaagcactggatgctcgacaagctcggcggagcttttgcccccaagccat 181 Query: 201 catctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagac 260 | ||||| ||||||||| |||||||||||||||| |||||||||||| | |||||||| Sbjct: 182 cgtctggacctcacaagtccagggaatgcctgcccctgatcctcatcatcaggaacaggt 241 Query: 261 tgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgtcatattatgg 320 |||| ||||| || || |||||||| || |||||||| |||||||| ||| | ||| Sbjct: 242 tgaagtatgcgctgacataccgtgaggttatctctatcctgatgcagcggcatgtcttgg 301 Query: 321 ttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatttcta 380 ||||||| |||||| | |||||||||||||||||||||||||||||||| | ||||| | Sbjct: 302 ttgatgggaaggtcaggactgacaagacctaccctgctggtttcatggatgtgatttcca 361 Query: 381 ttcccaagactggtgagaactacaggcttctgtatngacacc-agggccgcttccgcctt 439 |||| |||||||||||||||||||||||||| ||| |||||| |||| |||||||||||| Sbjct: 362 ttccaaagactggtgagaactacaggcttctctat-gacaccaagggtcgcttccgcctt 420 Query: 440 cactctgtcagggatgaggatgctaagntcaagc 473 || || |||| |||||||||||| ||| |||||| Sbjct: 421 cagtccgtcaaggatgaggatgccaagttcaagc 454
>ref|NM_193994.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 768 Score = 303 bits (153), Expect = 3e-79 Identities = 308/357 (86%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 107 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 166 ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| Sbjct: 1 atggcgaggggattgaagaagcatctcaagaggctcaatgcgcccaagcactggatgctc 60 Query: 167 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 226 |||||||| || ||||||||||||||||||||||| ||||| ||||||||| |||||||| Sbjct: 61 gacaagctcggcggagcttttgcccccaagccatcgtctggacctcacaagtccagggaa 120 Query: 227 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 286 |||||||| |||||||||||| | |||||||| |||| ||||| || || |||||||| Sbjct: 121 tgcctgcccctgatcctcatcatcaggaacaggttgaagtatgcgctgacataccgtgag 180 Query: 287 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 346 || |||||||| |||||||| ||| | |||||||||| |||||| | ||||||||| Sbjct: 181 gttatctctatcctgatgcagcggcatgtcttggttgatgggaaggtcaggactgacaag 240 Query: 347 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 406 ||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||| Sbjct: 241 acctaccctgctggtttcatggatgtgatttccattccaaagactggtgagaactacagg 300 Query: 407 cttctgtatngacacc-agggccgcttccgccttcactctgtcagggatgaggatgc 462 ||||| ||| |||||| |||| |||||||||||||| || |||| |||||||||||| Sbjct: 301 cttctctat-gacaccaagggtcgcttccgccttcagtccgtcaaggatgaggatgc 356
>gb|AF013487.1|AF013487 Zea mays ribosomal protein S4 type I (rps4) mRNA, complete cds Length = 1013 Score = 268 bits (135), Expect = 2e-68 Identities = 321/381 (84%), Gaps = 2/381 (0%) Strand = Plus / Plus Query: 94 cgagctcgcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtc 153 |||||| || ||||||||||| || |||||||||||| ||||||||||||||||||| Sbjct: 61 cgagcttgccaccatggctagaggattgaagaagcatttgaagaggctcaatgcccccaa 120 Query: 154 tcattggatgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctca 213 ||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 121 gcattggatgctggacaagcttggcggagcttttgctcccaagccatcttctggacctca 180 Query: 214 caaggccagggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctct 273 |||| | ||||| |||||||| |||||||||||| | |||||||| || || |||||||| Sbjct: 181 caagtctagggagtgcctgccactgatcctcatcatcaggaacaggctcaagtatgctct 240 Query: 274 cacgtaccgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggt 333 || |||||||| || || ||||| ||||| || ||| | | |||||||| ||||| Sbjct: 241 tacataccgtgaggtcatttccatcctgatgcaacgccatgtacttgttgatggcaaggt 300 Query: 334 ccgcactgacaagacctaccctgctggtttcatggacattatttctattcccaagactgg 393 | | || |||||||||||||||||||| |||||||| | ||||| || |||||||| Sbjct: 301 caggacagacaagacctaccctgctgggttcatggatgtcatttccatccccaagaccaa 360 Query: 394 tgagaactacaggcttctgtatngacacc-agggccgcttccgccttcactctgtcaggg 452 ||||||||||||||| ||||| || ||| |||||||||||||||||||| | |||||| Sbjct: 361 tgagaactacaggctgctgta-cgataccaagggccgcttccgccttcacccaatcaggg 419 Query: 453 atgaggatgctaagntcaagc 473 |||||||||||||| |||||| Sbjct: 420 atgaggatgctaagttcaagc 440
>gb|AY525608.1| Zea mays ribosomal protein S4 mRNA, complete cds Length = 1037 Score = 260 bits (131), Expect = 4e-66 Identities = 320/381 (83%), Gaps = 2/381 (0%) Strand = Plus / Plus Query: 94 cgagctcgcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtc 153 |||||| || ||||||||||| || |||||||||||| |||||||||||||||| || Sbjct: 59 cgagcttgccaccatggctagaggattgaagaagcatttgaagaggctcaatgcgcccaa 118 Query: 154 tcattggatgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctca 213 ||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 119 gcattggatgctggacaagcttggcggagcttttgctcccaagccatcttctggacctca 178 Query: 214 caaggccagggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctct 273 |||| | ||||| |||||||| |||||||||||| | |||||||| || || |||||||| Sbjct: 179 caagtctagggagtgcctgccactgatcctcatcatcaggaacaggctcaagtatgctct 238 Query: 274 cacgtaccgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggt 333 || |||||||| || || ||||| ||||| || ||| | | |||||||| ||||| Sbjct: 239 tacataccgtgaggtcatttccatcctgatgcaacgccatgtacttgttgatggcaaggt 298 Query: 334 ccgcactgacaagacctaccctgctggtttcatggacattatttctattcccaagactgg 393 | | || |||||||||||||||||||| |||||||| | ||||| || |||||||| Sbjct: 299 caggacagacaagacctaccctgctgggttcatggatgtcatttccatccccaagaccaa 358 Query: 394 tgagaactacaggcttctgtatngacacc-agggccgcttccgccttcactctgtcaggg 452 ||||||||||||||| ||||| || ||| |||||||||||||||||||| | |||||| Sbjct: 359 tgagaactacaggctgctgta-cgataccaagggccgcttccgccttcacccaatcaggg 417 Query: 453 atgaggatgctaagntcaagc 473 |||||||||||||| |||||| Sbjct: 418 atgaggatgctaagttcaagc 438
>gb|AF015522.1|AF015522 Zea mays ribsomal protein S4 (rps4) mRNA, complete cds Length = 1090 Score = 260 bits (131), Expect = 4e-66 Identities = 315/374 (84%), Gaps = 2/374 (0%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 ||||||||||||||||| ||||||||||| |||||||||||||||| || |||||| Sbjct: 79 gcaaccatggctaggggattgaagaagcacttgaagaggctcaatgcgcccaagcattgg 138 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| || Sbjct: 139 atgctcgacaagcttggcggagcttttgctcccaagccatcttctggacctcacaagtcc 198 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||| ||||| ||||||||||||||| | |||||||| || || |||||||| | ||| Sbjct: 199 agggagtgccttcctctgatcctcatcatcaggaacaggctcaagtatgctctgaactac 258 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 ||||| || |||||||| ||||| || ||| | | |||||||| |||||| | ||| Sbjct: 259 cgtgaggtcatttctatcctgatgcaacgccatgtacttgttgatggcaaggtcaggact 318 Query: 341 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 400 |||||||||||||||||||| |||||||| | ||||| || |||||||| |||||| Sbjct: 319 gacaagacctaccctgctgggttcatggatgtcatttccatccccaagacaatggagaac 378 Query: 401 tacaggcttctgtatngacacc-agggccgcttccgccttcactctgtcagggatgagga 459 |||||||| || ||| |||||| ||||||||||||| |||||| | ||||||||||||| Sbjct: 379 tacaggctgctttat-gacaccaagggccgcttccgtcttcacccaatcagggatgagga 437 Query: 460 tgctaagntcaagc 473 ||| ||| |||||| Sbjct: 438 tgccaagttcaagc 451
>gb|BT016261.1| Zea mays clone Contig94 mRNA sequence Length = 1116 Score = 252 bits (127), Expect = 9e-64 Identities = 314/374 (83%), Gaps = 2/374 (0%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 ||||||||||||||||| ||||||||||| |||||||||||||||| || |||||| Sbjct: 100 gcaaccatggctaggggattgaagaagcacttgaagaggctcaatgcgcccaagcattgg 159 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| || Sbjct: 160 atgctcgacaagcttggcggagcttttgctcccaagccatcttctggacctcacaagtcc 219 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||| ||||| ||||||||||||||| | |||||||| || || |||||||| | ||| Sbjct: 220 agggagtgccttcctctgatcctcatcatcaggaacaggctcaagtatgctctgaactac 279 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 ||||| || |||||||| ||||| || ||| | | |||||||| |||||| | ||| Sbjct: 280 cgtgaggtcatttctatcctgatgcaacgccatgtacttgttgatggcaaggtcaggact 339 Query: 341 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 400 |||||||||||||||||||| |||||||| | ||||| || || ||||| |||||| Sbjct: 340 gacaagacctaccctgctgggttcatggatgtcatttccatccctaagacaatggagaac 399 Query: 401 tacaggcttctgtatngacacc-agggccgcttccgccttcactctgtcagggatgagga 459 |||||||| || ||| |||||| ||||||||||||| |||||| | ||||||||||||| Sbjct: 400 tacaggctgctttat-gacaccaagggccgcttccgtcttcacccaatcagggatgagga 458 Query: 460 tgctaagntcaagc 473 ||| ||| |||||| Sbjct: 459 tgccaagttcaagc 472
>dbj|AK071862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123J20, full insert sequence Length = 1162 Score = 216 bits (109), Expect = 5e-53 Identities = 305/368 (82%), Gaps = 2/368 (0%) Strand = Plus / Plus Query: 107 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 166 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct: 99 atggcgaggggtttgaagaagcatctgaagaggctcaatgcccccagccattggatgttt 158 Query: 167 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 226 ||||||||||||||||| ||||| |||||||| || |||||||| ||||| || |||| Sbjct: 159 gacaagcttggtggagcatttgcacccaagccttcttctggtccccacaaagctcgggag 218 Query: 227 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 286 ||| ||||| ||||||| ||||| |||||||| |||| |||||||| || |||||||| Sbjct: 219 tgcttgcctttgatccttatcctcaggaacaggttgaagtatgctctgacctaccgtgag 278 Query: 287 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 346 || || ||| | |||||||| ||| |||||||||||||||||||| | ||||||||| Sbjct: 279 gttatttccatcttgatgcagcggcatgttatggttgatggaaaggtcaggactgacaag 338 Query: 347 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 406 || || || ||||| ||||||||| || | || ||| | |||||||| ||||| | | | Sbjct: 339 acttatccggctggattcatggacgttgtgtcaattgcaaagactggggagaatttccgc 398 Query: 407 cttctgtatngacacc-agggccgcttccgccttcactctgtcagggatgaggatgctaa 465 ||||||||| |||||| |||| |||||||| || ||| ||| ||||||||| ||||| Sbjct: 399 cttctgtat-gacaccaagggtcgcttccgtctccacagcatcaaggatgaggacgctaa 457 Query: 466 gntcaagc 473 | |||||| Sbjct: 458 gttcaagc 465
>emb|X79300.1|GHRS4E G.hirsutum (DPL 62) mRNA for ribosomal protein small subunit 4e Length = 1090 Score = 206 bits (104), Expect = 5e-50 Identities = 226/264 (85%), Gaps = 2/264 (0%) Strand = Plus / Plus Query: 107 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 166 |||||||| || |||||||| ||| ||||||||||||||||||| |||||||||||| Sbjct: 56 atggctagagggttgaagaaacatttgaagaggctcaatgcccctaggcattggatgctt 115 Query: 167 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 226 |||||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| Sbjct: 116 gacaagcttggtggtgcttttgcacccaagccatcatctggtcctcacaagtctagggaa 175 Query: 227 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 286 ||| |||| |||||||||| ||| | |||||| ||||||||||||| || || | ||| Sbjct: 176 tgcttgccattgatcctcattctgcgaaacagattgaaatatgctctgacctatagagaa 235 Query: 287 gtgcaat-ctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 345 || || | |||| || |||||| | ||| ||||||| ||||| ||||| | ||||| || Sbjct: 236 gt-cattgctattctcatgcagaggcatgttatggtagatgggaaggttagaactgataa 294 Query: 346 gacctaccctgctggtttcatgga 369 |||||||||||||||||||||||| Sbjct: 295 gacctaccctgctggtttcatgga 318
>gb|AF071891.1|AF071891 Prunus armeniaca 40S ribosomal protein S4 (RPS4) mRNA, complete cds Length = 1086 Score = 200 bits (101), Expect = 3e-48 Identities = 191/221 (86%) Strand = Plus / Plus Query: 107 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 166 |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 47 atggctagaggattgaagaagcatctgaagaggctcaatgccccaaagcattggatgctc 106 Query: 167 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 226 ||||||||||| || |||||||| ||||||||||||||||| |||||||| | ||||| Sbjct: 107 gacaagcttgggggtgcttttgctcccaagccatcatctgggcctcacaaatctagggag 166 Query: 227 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 286 ||||| || ||||||||||||||||||||||| |||| ||||||||||| |||||||| Sbjct: 167 tgccttccactgatcctcatcctgaggaacaggttgaagtatgctctcacataccgtgag 226 Query: 287 gtgcaatctatccttatgcagcgtcatattatggttgatgg 327 || || || || ||||||||||||||| |||||||||| Sbjct: 227 gtcgtttccattctcatgcagcgtcatattttggttgatgg 267
>gb|BT017558.1| Zea mays clone EL01N0424H12.c mRNA sequence Length = 1145 Score = 196 bits (99), Expect = 5e-47 Identities = 231/275 (84%) Strand = Plus / Minus Query: 94 cgagctcgcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtc 153 |||||| || ||||||||||| || |||||||||||| |||||||||||||||| || Sbjct: 1063 cgagcttgccaccatggctagaggattgaagaagcatttgaagaggctcaatgcgcccaa 1004 Query: 154 tcattggatgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctca 213 ||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 1003 gcattggatgctggacaagcttggcggagcttttgctcccaagccatcttctggacctca 944 Query: 214 caaggccagggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctct 273 |||| | ||||| |||||||| ||||||||||| | |||||||| || || |||||||| Sbjct: 943 caagtctagggagtgcctgccactgatcctcattatcaggaacaggctcaagtatgctct 884 Query: 274 cacgtaccgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggt 333 || |||||||| || || ||||| ||||| || ||| | | |||||||| ||||| Sbjct: 883 tacataccgtgaggtcatttccatcctgatgcaacgccatgtacttgttgatggcaaggt 824 Query: 334 ccgcactgacaagacctaccctgctggtttcatgg 368 | | || |||||||||||||||||||||||||||| Sbjct: 823 caggacagacaagacctaccctgctggtttcatgg 789 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/80 (88%), Gaps = 2/80 (2%) Strand = Plus / Minus Query: 395 gagaactacaggcttctgtatngacacca-gggccgcttccgccttcactctgtcaggga 453 |||||||||||||| ||||| || |||| ||||||||||||||||||| | ||||||| Sbjct: 680 gagaactacaggctgctgta-cgataccaagggccgcttccgccttcacccaatcaggga 622 Query: 454 tgaggatgctaagntcaagc 473 ||||||||||||| |||||| Sbjct: 621 tgaggatgctaagttcaagc 602
>dbj|D25237.1|RICSS620B Oryza sativa SS620 mRNA for scar protein, partial cds Length = 293 Score = 174 bits (88), Expect = 2e-40 Identities = 160/182 (87%), Gaps = 2/182 (1%) Strand = Plus / Plus Query: 293 tctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctac 352 |||||||| |||||||| ||| | |||||||||| |||||| | ||||||||||||||| Sbjct: 32 tctatcctcatgcagcgccatgtcttggttgatggcaaggtcaggactgacaagacctac 91 Query: 353 cctgctggtttcatggacattatttctattcccaagactggtgagaactacaggcttctg 412 || |||||||||||||| | ||||| || |||||||||||||||||||||||||||||| Sbjct: 92 ccagctggtttcatggatgtcatttccatccccaagactggtgagaactacaggcttctg 151 Query: 413 tatngacacc-agggccgcttccgccttcactctgtcagggatgaggatgctaagntcaa 471 || |||||| |||| || ||||||||||| ||||||| |||||||||||||||| |||| Sbjct: 152 ta-cgacaccaagggacgtttccgccttcagtctgtcaaggatgaggatgctaagttcaa 210 Query: 472 gc 473 || Sbjct: 211 gc 212
>dbj|AB232685.1| Panax ginseng mRNA for ribosomal protein S4, complete cds Length = 1105 Score = 172 bits (87), Expect = 7e-40 Identities = 240/291 (82%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 |||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 82 gcaaccatggctagaggtttgaagaagcatttgaagaggctcaatgcccctaagcattgg 141 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 ||||| || || |||||||| || ||||| |||||||| |||||||| || || || || Sbjct: 142 atgctcgataaacttggtggtgcatttgctcccaagccttcatctggaccccataaatcc 201 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||||||||||||| |||| || || || | ||||| ||||| |||||||| || ||| Sbjct: 202 agggaatgcctgcctttgattcttattttgcgaaacaggctgaagtatgctctaacttac 261 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 |||||||| ||||| ||| | ||||| || ||| || | |||||||| ||||| | || Sbjct: 262 cgtgaagtccaatccatcttgatgcaacgacatgttcttgttgatgggaaggttaggacg 321 Query: 341 gacaagacctaccctgctggtttcatggacattatttctattcccaagact 391 || |||||||| || |||||||||||||| || | || |||||||||||| Sbjct: 322 gataagacctatccagctggtttcatggatgttgtatcaattcccaagact 372
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Minus Query: 188 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 247 |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 318017 gcccccaagccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcatt 317958 Query: 248 ctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcag 307 | |||||||| || || |||||||| || |||||||| || |||||||| |||||| Sbjct: 317957 atcaggaacaggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcag 317898 Query: 308 cgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatg 367 || ||| | |||||||||| |||||| | ||||||||||||||||| |||||||||||| Sbjct: 317897 cgccatgtcttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatg 317838 Query: 368 g 368 | Sbjct: 317837 g 317837 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 113 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 172 ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 318196 aggggtttgaagaagcatctgaagaggctcaatgcgcccaagcattggatgctcgacaag 318137 Query: 173 cttggtggagcttttg 188 |||||||||||||||| Sbjct: 318136 cttggtggagcttttg 318121 Score = 101 bits (51), Expect = 2e-18 Identities = 85/94 (90%), Gaps = 2/94 (2%) Strand = Plus / Minus Query: 374 atttctattcccaagactggtgagaactacaggcttctgtatngacacc-agggccgctt 432 ||||| || |||||||||||||||||||||||||||||||| |||||| |||| || || Sbjct: 317739 atttccatccccaagactggtgagaactacaggcttctgta-cgacaccaagggacgttt 317681 Query: 433 ccgccttcactctgtcagggatgaggatgctaag 466 ||||||||| ||||||| |||||||||||||||| Sbjct: 317680 ccgccttcagtctgtcaaggatgaggatgctaag 317647 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 77 agcacggcgacctagcccgagctcgcaaccatgg 110 |||||||||||||||||||| ||||||||||||| Sbjct: 319055 agcacggcgacctagcccgacctcgcaaccatgg 319022
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Plus Query: 188 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 247 |||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 14497061 gcccccaagccatcgtctggacctcacaagtccagggaatgcctgcccctgatcctcatc 14497120 Query: 248 ctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcag 307 | |||||||| |||| ||||| || || |||||||| || |||||||| |||||| Sbjct: 14497121 atcaggaacaggttgaagtatgcgctgacataccgtgaggttatctctatcctgatgcag 14497180 Query: 308 cgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatg 367 || ||| | |||||||||| |||||| | |||||||||||||||||||||||||||||| Sbjct: 14497181 cggcatgtcttggttgatgggaaggtcaggactgacaagacctaccctgctggtttcatg 14497240 Query: 368 g 368 | Sbjct: 14497241 g 14497241 Score = 91.7 bits (46), Expect = 2e-15 Identities = 81/90 (90%), Gaps = 2/90 (2%) Strand = Plus / Plus Query: 374 atttctattcccaagactggtgagaactacaggcttctgtatngacacc-agggccgctt 432 ||||| ||||| |||||||||||||||||||||||||| ||| |||||| |||| ||||| Sbjct: 14497353 atttccattccaaagactggtgagaactacaggcttctctat-gacaccaagggtcgctt 14497411 Query: 433 ccgccttcactctgtcagggatgaggatgc 462 ||||||||| || |||| |||||||||||| Sbjct: 14497412 ccgccttcagtccgtcaaggatgaggatgc 14497441 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 113 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 172 ||||| |||||||||||||| |||||||||||||| || || |||||||| |||||| Sbjct: 14496878 aggggattgaagaagcatctcaagaggctcaatgcgcccaagcactggatgctcgacaag 14496937 Query: 173 cttggtggagcttttg 188 || || |||||||||| Sbjct: 14496938 ctcggcggagcttttg 14496953 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 81 cggcgacctagcccgagctcgcaaccatgg 110 ||||||| |||| ||||||||||||||||| Sbjct: 14496272 cggcgacgtagctcgagctcgcaaccatgg 14496301
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Minus Query: 188 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 247 |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 46801 gcccccaagccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcatt 46742 Query: 248 ctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcag 307 | |||||||| || || |||||||| || |||||||| || |||||||| |||||| Sbjct: 46741 atcaggaacaggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcag 46682 Query: 308 cgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatg 367 || ||| | |||||||||| |||||| | ||||||||||||||||| |||||||||||| Sbjct: 46681 cgccatgtcttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatg 46622 Query: 368 g 368 | Sbjct: 46621 g 46621 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 113 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 172 ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 46980 aggggtttgaagaagcatctgaagaggctcaatgcgcccaagcattggatgctcgacaag 46921 Query: 173 cttggtggagcttttg 188 |||||||||||||||| Sbjct: 46920 cttggtggagcttttg 46905 Score = 101 bits (51), Expect = 2e-18 Identities = 85/94 (90%), Gaps = 2/94 (2%) Strand = Plus / Minus Query: 374 atttctattcccaagactggtgagaactacaggcttctgtatngacacc-agggccgctt 432 ||||| || |||||||||||||||||||||||||||||||| |||||| |||| || || Sbjct: 46523 atttccatccccaagactggtgagaactacaggcttctgta-cgacaccaagggacgttt 46465 Query: 433 ccgccttcactctgtcagggatgaggatgctaag 466 ||||||||| ||||||| |||||||||||||||| Sbjct: 46464 ccgccttcagtctgtcaaggatgaggatgctaag 46431 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 77 agcacggcgacctagcccgagctcgcaaccatgg 110 |||||||||||||||||||| ||||||||||||| Sbjct: 47839 agcacggcgacctagcccgacctcgcaaccatgg 47806
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Plus Query: 188 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 247 |||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 56374 gcccccaagccatcgtctggacctcacaagtccagggaatgcctgcccctgatcctcatc 56433 Query: 248 ctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcag 307 | |||||||| |||| ||||| || || |||||||| || |||||||| |||||| Sbjct: 56434 atcaggaacaggttgaagtatgcgctgacataccgtgaggttatctctatcctgatgcag 56493 Query: 308 cgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatg 367 || ||| | |||||||||| |||||| | |||||||||||||||||||||||||||||| Sbjct: 56494 cggcatgtcttggttgatgggaaggtcaggactgacaagacctaccctgctggtttcatg 56553 Query: 368 g 368 | Sbjct: 56554 g 56554 Score = 91.7 bits (46), Expect = 2e-15 Identities = 81/90 (90%), Gaps = 2/90 (2%) Strand = Plus / Plus Query: 374 atttctattcccaagactggtgagaactacaggcttctgtatngacacc-agggccgctt 432 ||||| ||||| |||||||||||||||||||||||||| ||| |||||| |||| ||||| Sbjct: 56666 atttccattccaaagactggtgagaactacaggcttctctat-gacaccaagggtcgctt 56724 Query: 433 ccgccttcactctgtcagggatgaggatgc 462 ||||||||| || |||| |||||||||||| Sbjct: 56725 ccgccttcagtccgtcaaggatgaggatgc 56754 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 113 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 172 ||||| |||||||||||||| |||||||||||||| || || |||||||| |||||| Sbjct: 56191 aggggattgaagaagcatctcaagaggctcaatgcgcccaagcactggatgctcgacaag 56250 Query: 173 cttggtggagcttttg 188 || || |||||||||| Sbjct: 56251 ctcggcggagcttttg 56266 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 81 cggcgacctagcccgagctcgcaaccatgg 110 ||||||| |||| ||||||||||||||||| Sbjct: 55585 cggcgacgtagctcgagctcgcaaccatgg 55614
>ref|XM_475130.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 738 Score = 157 bits (79), Expect = 4e-35 Identities = 257/314 (81%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 ||||||||||||||||||||||| ||||| |||||||| || |||||||| ||||| || Sbjct: 1 atgcttgacaagcttggtggagcatttgcacccaagccttcttctggtccccacaaagct 60 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 |||| ||| ||||| ||||||| ||||| |||||||| |||| |||||||| || ||| Sbjct: 61 cgggagtgcttgcctttgatccttatcctcaggaacaggttgaagtatgctctgacctac 120 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 ||||| || || ||| | |||||||| ||| |||||||||||||||||||| | ||| Sbjct: 121 cgtgaggttatttccatcttgatgcagcggcatgttatggttgatggaaaggtcaggact 180 Query: 341 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 400 |||||||| || || ||||| ||||||||| || | || ||| | |||||||| ||||| Sbjct: 181 gacaagacttatccggctggattcatggacgttgtgtcaattgcaaagactggggagaat 240 Query: 401 tacaggcttctgtatngacacc-agggccgcttccgccttcactctgtcagggatgagga 459 | | | ||||||||| |||||| |||| |||||||| || ||| ||| ||||||||| Sbjct: 241 ttccgccttctgtat-gacaccaagggtcgcttccgtctccacagcatcaaggatgagga 299 Query: 460 tgctaagntcaagc 473 |||||| |||||| Sbjct: 300 cgctaagttcaagc 313
>dbj|D21302.1|RICSS536 Oryza sativa SS536 mRNA for ribosomal protein S4, partial sequence Length = 347 Score = 157 bits (79), Expect = 4e-35 Identities = 150/173 (86%), Gaps = 2/173 (1%) Strand = Plus / Plus Query: 302 atgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggt 361 |||||||| ||| | |||||||||| |||||| | ||||||||||||||||| |||||| Sbjct: 4 atgcagcgccatgtnttggttgatggcaaggtcaggactgacaagacctacccagctggt 63 Query: 362 ttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatngacac 421 |||||||| | ||||| || ||||||||||||||||||||||||||||| || ||||| Sbjct: 64 ttcatggatgtnatttccatccccaagactggtgagaactacaggcttctnta-cgacac 122 Query: 422 c-agggccgcttccgccttcactctgtcagggatgaggatgctaagntcaagc 473 | |||| || |||| |||||| ||||||| |||||||||||||||| |||||| Sbjct: 123 caagggacgtttccnccttcagtctgtcaaggatgaggatgctaagttcaagc 175
>ref|NM_125228.3| Arabidopsis thaliana structural constituent of ribosome AT5G58420 mRNA, complete cds Length = 1080 Score = 137 bits (69), Expect = 4e-29 Identities = 231/285 (81%) Strand = Plus / Plus Query: 106 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 165 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 93 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 152 Query: 166 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 225 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 153 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 212 Query: 226 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 285 ||||| || || |||| ||| | |||||||| |||| |||||||| || |||||||| Sbjct: 213 gtgccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 272 Query: 286 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 345 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 273 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 332 Query: 346 gacctaccctgctggtttcatggacattatttctattcccaagac 390 |||||||||||||||||||||||| || | ||||| |||||||| Sbjct: 333 gacctaccctgctggtttcatggatgttgtgtctatccccaagac 377
>gb|AF428285.1|AF428285 Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, complete cds Length = 1005 Score = 137 bits (69), Expect = 4e-29 Identities = 231/285 (81%) Strand = Plus / Plus Query: 106 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 165 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 84 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 143 Query: 166 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 225 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 144 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 203 Query: 226 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 285 ||||| || || |||| ||| | |||||||| |||| |||||||| || |||||||| Sbjct: 204 gtgccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 263 Query: 286 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 345 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 264 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 323 Query: 346 gacctaccctgctggtttcatggacattatttctattcccaagac 390 |||||||||||||||||||||||| || | ||||| |||||||| Sbjct: 324 gacctaccctgctggtttcatggatgttgtgtctatccccaagac 368
>emb|BX832274.1|CNS09ZPH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 978 Score = 137 bits (69), Expect = 4e-29 Identities = 231/285 (81%) Strand = Plus / Plus Query: 106 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 165 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 93 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 152 Query: 166 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 225 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 153 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 212 Query: 226 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 285 ||||| || || |||| ||| | |||||||| |||| |||||||| || |||||||| Sbjct: 213 gtgccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 272 Query: 286 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 345 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 273 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 332 Query: 346 gacctaccctgctggtttcatggacattatttctattcccaagac 390 |||||||||||||||||||||||| || | ||||| |||||||| Sbjct: 333 gacctaccctgctggtttcatggatgttgtgtctatccccaagac 377
>gb|AY086206.1| Arabidopsis thaliana clone 22434 mRNA, complete sequence Length = 1010 Score = 137 bits (69), Expect = 4e-29 Identities = 231/285 (81%) Strand = Plus / Plus Query: 106 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 165 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 88 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 147 Query: 166 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 225 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 148 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 207 Query: 226 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 285 ||||| || || |||| ||| | |||||||| |||| |||||||| || |||||||| Sbjct: 208 gtgccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 267 Query: 286 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 345 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 268 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 327 Query: 346 gacctaccctgctggtttcatggacattatttctattcccaagac 390 |||||||||||||||||||||||| || | ||||| |||||||| Sbjct: 328 gacctaccctgctggtttcatggatgttgtgtctatccccaagac 372
>gb|AF528526.1| Glycine max 40S ribosomal S4 protein mRNA, complete cds Length = 1054 Score = 133 bits (67), Expect = 6e-28 Identities = 214/263 (81%) Strand = Plus / Plus Query: 107 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 166 ||||||||||| |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 98 atggctaggggattgaagaagcatctcaagaggctcaatgctcctaagcattggatgctt 157 Query: 167 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 226 ||||| || ||||| || ||||| ||||| || |||||||| || ||||| | ||||| Sbjct: 158 gacaaactgggtggtgcatttgcgcccaaaccctcatctggaccacacaaatctagggag 217 Query: 227 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 286 ||||| || || || |||||||| | ||| | || || |||||||| || ||||||||| Sbjct: 218 tgccttcccctcatactcatcctacgaaaccggctaaagtatgctctgacttaccgtgaa 277 Query: 287 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 346 || |||| || |||||| | ||| || | ||||||||||| ||| | ||||||||| Sbjct: 278 gtcatcgctattctgatgcagagacatgttcttgttgatggaaaagtcaggactgacaag 337 Query: 347 acctaccctgctggtttcatgga 369 || |||||||||||||||||||| Sbjct: 338 acttaccctgctggtttcatgga 360
>emb|X76651.1|STRPS4 S.tuberosum (Desiree) mRNA for ribosomal protein S4 Length = 966 Score = 133 bits (67), Expect = 6e-28 Identities = 214/263 (81%) Strand = Plus / Plus Query: 107 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 166 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 50 atggctagaggtttgaagaagcatctgaagaggctcaatgccccaaagcattggatgctt 109 Query: 167 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 226 || || ||||||||||| ||||||||||||||||| ||||| || ||||| | ||||| Sbjct: 110 gataaacttggtggagcatttgcccccaagccatcctctgggccacacaaatcaagggag 169 Query: 227 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 286 ||| |||| || || | ||| || | ||||| |||| ||||||||||| ||||| || Sbjct: 170 tgcttgccattggtcattatcatgcgaaacaggttgaagtatgctctcacataccgagag 229 Query: 287 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 346 ||| || || || ||||| || || ||||||||||||| || || | || || ||| Sbjct: 230 gtgatctcaattctgatgcaacgacaagttatggttgatgggaaagttaggacagataag 289 Query: 347 acctaccctgctggtttcatgga 369 || || ||||||||||||||||| Sbjct: 290 acatatcctgctggtttcatgga 312
>gb|AY070467.1| Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, complete cds Length = 995 Score = 129 bits (65), Expect = 9e-27 Identities = 230/285 (80%) Strand = Plus / Plus Query: 106 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 165 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 73 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 132 Query: 166 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 225 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 133 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 192 Query: 226 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 285 ||||| || || |||| ||| | |||||||| || | |||||||| || |||||||| Sbjct: 193 gtgccttcccctcgtccttatcatcaggaacaggttggagtatgctcttacctaccgtga 252 Query: 286 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 345 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 253 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 312 Query: 346 gacctaccctgctggtttcatggacattatttctattcccaagac 390 |||||||||||||||||||||||| || | ||||| |||||||| Sbjct: 313 gacctaccctgctggtttcatggatgttgtgtctatccccaagac 357
>emb|BX830283.1|CNS09ZZO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 988 Score = 129 bits (65), Expect = 9e-27 Identities = 230/285 (80%) Strand = Plus / Plus Query: 106 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 165 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 64 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 123 Query: 166 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 225 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 124 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 183 Query: 226 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 285 | ||| || || |||| ||| | |||||||| |||| |||||||| || |||||||| Sbjct: 184 gttccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 243 Query: 286 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 345 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 244 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 303 Query: 346 gacctaccctgctggtttcatggacattatttctattcccaagac 390 |||||||||||||||||||||||| || | ||||| |||||||| Sbjct: 304 gacctaccctgctggtttcatggatgttgtgtctatccccaagac 348
>emb|BX832264.1|CNS09ZM6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 997 Score = 129 bits (65), Expect = 9e-27 Identities = 230/285 (80%) Strand = Plus / Plus Query: 106 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 165 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 73 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 132 Query: 166 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 225 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 133 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 192 Query: 226 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 285 | ||| || || |||| ||| | |||||||| |||| |||||||| || |||||||| Sbjct: 193 gttccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 252 Query: 286 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 345 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 253 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 312 Query: 346 gacctaccctgctggtttcatggacattatttctattcccaagac 390 |||||||||||||||||||||||| || | ||||| |||||||| Sbjct: 313 gacctaccctgctggtttcatggatgttgtgtctatccccaagac 357
>gb|AY085205.1| Arabidopsis thaliana clone 13813 mRNA, complete sequence Length = 1011 Score = 129 bits (65), Expect = 9e-27 Identities = 218/269 (81%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 |||| |||||| || || |||||||||||||| ||||||||||||||||| |||||| Sbjct: 22 gcaaacatggcaagaggattgaagaagcatctaaagaggctcaatgcccctaagcattgg 81 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 ||||||||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | Sbjct: 82 atgcttgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcg 141 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||| || || ||||| |||| ||| | |||||||| |||| |||||| | || ||| Sbjct: 142 agggagtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttac 201 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 |||||||| |||||| | ||||| | ||||| |||||||| || ||| | ||| Sbjct: 202 cgtgaagttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggact 261 Query: 341 gacaagacctaccctgctggtttcatgga 369 |||||||| |||||||||||||||||||| Sbjct: 262 gacaagacttaccctgctggtttcatgga 290
>gb|AY143834.1| Arabidopsis thaliana At5g58420/mqj2_10 mRNA, complete cds Length = 789 Score = 127 bits (64), Expect = 4e-26 Identities = 229/284 (80%) Strand = Plus / Plus Query: 107 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 166 ||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||| Sbjct: 1 atggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgctt 60 Query: 167 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 226 ||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 61 gacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaagggag 120 Query: 227 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 286 ||||| || || |||| ||| | |||||||| || | |||||||| || ||||||||| Sbjct: 121 tgccttcccctcgtccttatcatcaggaacaggttggagtatgctcttacctaccgtgaa 180 Query: 287 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 346 ||| || ||| | ||||| | ||||| |||||||| || ||| | || |||||| Sbjct: 181 gtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaag 240 Query: 347 acctaccctgctggtttcatggacattatttctattcccaagac 390 ||||||||||||||||||||||| || | ||||| |||||||| Sbjct: 241 acctaccctgctggtttcatggatgttgtgtctatccccaagac 284
>gb|DQ268839.1| Solanum tuberosum clone 130D11 40S ribosomal protein S4-like protein mRNA, complete cds Length = 1052 Score = 127 bits (64), Expect = 4e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 107 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 166 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 33 atggctagaggtttgaagaagcatctgaagaggctcaatgccccaaagcattggatgctt 92 Query: 167 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 226 || || ||||||||||| ||||| ||||||||||| ||||| || |||||| | ||||| Sbjct: 93 gataaacttggtggagcatttgctcccaagccatcctctgggccacacaagtcaagggag 152 Query: 227 tgcctgcc 234 ||| |||| Sbjct: 153 tgcttgcc 160
>ref|NM_120791.2| Arabidopsis thaliana structural constituent of ribosome AT5G07090 transcript variant AT5G07090.1 mRNA, complete cds Length = 1088 Score = 121 bits (61), Expect = 2e-24 Identities = 217/269 (80%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 |||| |||||| || || |||||||||||||| |||||||||||||| || |||||| Sbjct: 22 gcaaacatggcaagaggattgaagaagcatctaaagaggctcaatgctcctaagcattgg 81 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 ||||||||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | Sbjct: 82 atgcttgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcg 141 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||| || || ||||| |||| ||| | |||||||| |||| |||||| | || ||| Sbjct: 142 agggagtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttac 201 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 |||||||| |||||| | ||||| | ||||| |||||||| || ||| | ||| Sbjct: 202 cgtgaagttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggact 261 Query: 341 gacaagacctaccctgctggtttcatgga 369 |||||||| |||||||||||||||||||| Sbjct: 262 gacaagacttaccctgctggtttcatgga 290
>gb|AY050933.1| Arabidopsis thaliana putative 40S ribosomal protein S4 (At5g07090) mRNA, complete cds Length = 1059 Score = 121 bits (61), Expect = 2e-24 Identities = 217/269 (80%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 |||| |||||| || || |||||||||||||| |||||||||||||| || |||||| Sbjct: 19 gcaaacatggcaagaggattgaagaagcatctaaagaggctcaatgctcctaagcattgg 78 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 ||||||||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | Sbjct: 79 atgcttgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcg 138 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||| || || ||||| |||| ||| | |||||||| |||| |||||| | || ||| Sbjct: 139 agggagtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttac 198 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 |||||||| |||||| | ||||| | ||||| |||||||| || ||| | ||| Sbjct: 199 cgtgaagttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggact 258 Query: 341 gacaagacctaccctgctggtttcatgga 369 |||||||| |||||||||||||||||||| Sbjct: 259 gacaagacttaccctgctggtttcatgga 287
>gb|AY070769.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, complete cds Length = 1008 Score = 121 bits (61), Expect = 2e-24 Identities = 217/269 (80%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 |||| |||||| || || |||||||||||||| |||||||||||||| || |||||| Sbjct: 19 gcaaacatggcaagaggattgaagaagcatctaaagaggctcaatgctcctaagcattgg 78 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 ||||||||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | Sbjct: 79 atgcttgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcg 138 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||| || || ||||| |||| ||| | |||||||| |||| |||||| | || ||| Sbjct: 139 agggagtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttac 198 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 |||||||| |||||| | ||||| | ||||| |||||||| || ||| | ||| Sbjct: 199 cgtgaagttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggact 258 Query: 341 gacaagacctaccctgctggtttcatgga 369 |||||||| |||||||||||||||||||| Sbjct: 259 gacaagacttaccctgctggtttcatgga 287
>ref|NM_127291.2| Arabidopsis thaliana structural constituent of ribosome AT2G17360 mRNA, complete cds Length = 1074 Score = 117 bits (59), Expect = 3e-23 Identities = 297/374 (79%), Gaps = 2/374 (0%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 108 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 167 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| | Sbjct: 168 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtct 227 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||| || | || || |||| ||| | |||||||| |||| |||||||| || ||| Sbjct: 228 agggagtgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatac 287 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 | |||||| || ||| | ||||| | |||||| ||||||||| || || | ||| Sbjct: 288 agagaagtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggact 347 Query: 341 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 400 |||||||| |||||||||||||||||||| || | ||||| ||||| || ||||||| Sbjct: 348 gacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaac 407 Query: 401 tacaggcttctgtatngacacc-agggccgcttccgccttcactctgtcagggatgagga 459 | | | ||| ||||| |||||| |||| || ||||| || ||||| ||| ||||||||| Sbjct: 408 ttccgtcttttgtat-gacaccaagggacgtttccgtctccactccatcaaggatgagga 466 Query: 460 tgctaagntcaagc 473 |||||| |||||| Sbjct: 467 ggctaagttcaagc 480
>ref|NM_001036769.1| Arabidopsis thaliana structural constituent of ribosome AT5G07090 transcript variant AT5G07090.2 mRNA, complete cds Length = 1174 Score = 117 bits (59), Expect = 3e-23 Identities = 203/251 (80%) Strand = Plus / Plus Query: 119 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 178 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 125 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 184 Query: 179 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 238 || || || || ||||| ||||| ||||| ||||||||| | ||||| || || ||||| Sbjct: 185 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtgtcttcctctt 244 Query: 239 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 298 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 245 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 304 Query: 299 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 358 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 305 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 364 Query: 359 ggtttcatgga 369 ||||||||||| Sbjct: 365 ggtttcatgga 375
>gb|AY079417.1| Arabidopsis thaliana putative 40S ribosomal protein S4 (At5g07090) mRNA, complete cds Length = 820 Score = 117 bits (59), Expect = 3e-23 Identities = 203/251 (80%) Strand = Plus / Plus Query: 119 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 178 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 13 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 72 Query: 179 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 238 || || || || ||||| ||||| ||||| ||||||||| | ||||| || || ||||| Sbjct: 73 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtgtcttcctctt 132 Query: 239 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 298 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 133 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 192 Query: 299 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 358 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 193 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 252 Query: 359 ggtttcatgga 369 ||||||||||| Sbjct: 253 ggtttcatgga 263
>gb|AY035131.1| Arabidopsis thaliana putative ribosomal protein S4 (At2g17360) mRNA, complete cds Length = 1032 Score = 117 bits (59), Expect = 3e-23 Identities = 297/374 (79%), Gaps = 2/374 (0%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 67 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 126 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| | Sbjct: 127 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtct 186 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||| || | || || |||| ||| | |||||||| |||| |||||||| || ||| Sbjct: 187 agggagtgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatac 246 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 | |||||| || ||| | ||||| | |||||| ||||||||| || || | ||| Sbjct: 247 agagaagtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggact 306 Query: 341 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 400 |||||||| |||||||||||||||||||| || | ||||| ||||| || ||||||| Sbjct: 307 gacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaac 366 Query: 401 tacaggcttctgtatngacacc-agggccgcttccgccttcactctgtcagggatgagga 459 | | | ||| ||||| |||||| |||| || ||||| || ||||| ||| ||||||||| Sbjct: 367 ttccgtcttttgtat-gacaccaagggacgtttccgtctccactccatcaaggatgagga 425 Query: 460 tgctaagntcaagc 473 |||||| |||||| Sbjct: 426 ggctaagttcaagc 439
>gb|AY093715.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, complete cds Length = 789 Score = 117 bits (59), Expect = 3e-23 Identities = 203/251 (80%) Strand = Plus / Plus Query: 119 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 178 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 13 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 72 Query: 179 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 238 || || || || ||||| ||||| ||||| ||||||||| | ||||| || || ||||| Sbjct: 73 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtgtcttcctctt 132 Query: 239 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 298 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 133 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 192 Query: 299 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 358 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 193 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 252 Query: 359 ggtttcatgga 369 ||||||||||| Sbjct: 253 ggtttcatgga 263
>gb|AF370469.1|AF370469 Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1034 Score = 117 bits (59), Expect = 3e-23 Identities = 297/374 (79%), Gaps = 2/374 (0%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 68 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 127 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| | Sbjct: 128 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtct 187 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||| || | || || |||| ||| | |||||||| |||| |||||||| || ||| Sbjct: 188 agggagtgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatac 247 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 | |||||| || ||| | ||||| | |||||| ||||||||| || || | ||| Sbjct: 248 agagaagtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggact 307 Query: 341 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 400 |||||||| |||||||||||||||||||| || | ||||| ||||| || ||||||| Sbjct: 308 gacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaac 367 Query: 401 tacaggcttctgtatngacacc-agggccgcttccgccttcactctgtcagggatgagga 459 | | | ||| ||||| |||||| |||| || ||||| || ||||| ||| ||||||||| Sbjct: 368 ttccgtcttttgtat-gacaccaagggacgtttccgtctccactccatcaaggatgagga 426 Query: 460 tgctaagntcaagc 473 |||||| |||||| Sbjct: 427 ggctaagttcaagc 440
>emb|BX818868.1|CNS0A8UP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1007 Score = 117 bits (59), Expect = 3e-23 Identities = 297/374 (79%), Gaps = 2/374 (0%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 60 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 119 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| | Sbjct: 120 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtct 179 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||| || | || || |||| ||| | |||||||| |||| |||||||| || ||| Sbjct: 180 agggagtgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatac 239 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 | |||||| || ||| | ||||| | |||||| ||||||||| || || | ||| Sbjct: 240 agagaagtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggact 299 Query: 341 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 400 |||||||| |||||||||||||||||||| || | ||||| ||||| || ||||||| Sbjct: 300 gacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaac 359 Query: 401 tacaggcttctgtatngacacc-agggccgcttccgccttcactctgtcagggatgagga 459 | | | ||| ||||| |||||| |||| || ||||| || ||||| ||| ||||||||| Sbjct: 360 ttccgtcttttgtat-gacaccaagggacgtttccgtctccactccatcaaggatgagga 418 Query: 460 tgctaagntcaagc 473 |||||| |||||| Sbjct: 419 ggctaagttcaagc 432
>emb|BX832253.1|CNS09ZUO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 945 Score = 117 bits (59), Expect = 3e-23 Identities = 203/251 (80%) Strand = Plus / Plus Query: 119 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 178 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 11 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 70 Query: 179 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 238 || || || || ||||| ||||| ||||| ||||||||| | ||||| || || ||||| Sbjct: 71 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtgtcttcctctt 130 Query: 239 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 298 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 131 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatttctatc 190 Query: 299 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 358 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 191 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 250 Query: 359 ggtttcatgga 369 ||||||||||| Sbjct: 251 ggtttcatgga 261
>gb|AY084230.1| Arabidopsis thaliana clone 10042 mRNA, complete sequence Length = 1023 Score = 117 bits (59), Expect = 3e-23 Identities = 297/374 (79%), Gaps = 2/374 (0%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 108 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 167 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| | Sbjct: 168 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtct 227 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||| || | || || |||| ||| | |||||||| |||| |||||||| || ||| Sbjct: 228 agggagtgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatac 287 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 | |||||| || ||| | ||||| | |||||| ||||||||| || || | ||| Sbjct: 288 agagaagtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggact 347 Query: 341 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 400 |||||||| |||||||||||||||||||| || | ||||| ||||| || ||||||| Sbjct: 348 gacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaac 407 Query: 401 tacaggcttctgtatngacacc-agggccgcttccgccttcactctgtcagggatgagga 459 | | | ||| ||||| |||||| |||| || ||||| || ||||| ||| ||||||||| Sbjct: 408 ttccgtcttttgtat-gacaccaagggacgtttccgtctccactccatcaaggatgagga 466 Query: 460 tgctaagntcaagc 473 |||||| |||||| Sbjct: 467 ggctaagttcaagc 480
>gb|AY062983.1| Arabidopsis thaliana putative ribosomal protein S4 (At2g17360) mRNA, complete cds Length = 817 Score = 113 bits (57), Expect = 5e-22 Identities = 292/368 (79%), Gaps = 2/368 (0%) Strand = Plus / Plus Query: 107 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 166 ||||| || ||||||||||||||| |||||||||||||||| || |||||||||||| Sbjct: 1 atggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgctt 60 Query: 167 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 226 || || |||||||| || |||||||||||||| || ||||| || |||||| | ||||| Sbjct: 61 gataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtctagggag 120 Query: 227 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 286 || | || || |||| ||| | |||||||| |||| |||||||| || ||| | ||| Sbjct: 121 tgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatacagagaa 180 Query: 287 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 346 ||| || ||| | ||||| | |||||| ||||||||| || || | ||||||||| Sbjct: 181 gtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggactgacaag 240 Query: 347 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 406 || |||||||||||||||||||| || | ||||| ||||| || |||||||| | | Sbjct: 241 acttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaacttccgt 300 Query: 407 cttctgtatngacacc-agggccgcttccgccttcactctgtcagggatgaggatgctaa 465 ||| ||||| |||||| |||| || ||||| || ||||| ||| ||||||||| ||||| Sbjct: 301 cttttgtat-gacaccaagggacgtttccgtctccactccatcaaggatgaggaggctaa 359 Query: 466 gntcaagc 473 | |||||| Sbjct: 360 gttcaagc 367
>gb|AY064625.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 813 Score = 113 bits (57), Expect = 5e-22 Identities = 292/368 (79%), Gaps = 2/368 (0%) Strand = Plus / Plus Query: 107 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 166 ||||| || ||||||||||||||| |||||||||||||||| || |||||||||||| Sbjct: 1 atggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgctt 60 Query: 167 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 226 || || |||||||| || |||||||||||||| || ||||| || |||||| | ||||| Sbjct: 61 gataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtctagggag 120 Query: 227 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 286 || | || || |||| ||| | |||||||| |||| |||||||| || ||| | ||| Sbjct: 121 tgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatacagagaa 180 Query: 287 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 346 ||| || ||| | ||||| | |||||| ||||||||| || || | ||||||||| Sbjct: 181 gtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggactgacaag 240 Query: 347 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 406 || |||||||||||||||||||| || | ||||| ||||| || |||||||| | | Sbjct: 241 acttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaacttccgt 300 Query: 407 cttctgtatngacacc-agggccgcttccgccttcactctgtcagggatgaggatgctaa 465 ||| ||||| |||||| |||| || ||||| || ||||| ||| ||||||||| ||||| Sbjct: 301 cttttgtat-gacaccaagggacgtttccgtctccactccatcaaggatgaggaggctaa 359 Query: 466 gntcaagc 473 | |||||| Sbjct: 360 gttcaagc 367
>emb|BX820506.1|CNS0A8QA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH41ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1000 Score = 113 bits (57), Expect = 5e-22 Identities = 216/269 (80%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 53 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 112 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 220 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| | Sbjct: 113 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtct 172 Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 280 ||||| || | || || |||| ||| | |||||||| |||| |||||||| || ||| Sbjct: 173 agggagtgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatac 232 Query: 281 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 340 | |||||| || ||| | ||||| | |||||| ||||||||| || || | ||| Sbjct: 233 agagaagtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggact 292 Query: 341 gacaagacctaccctgctggtttcatgga 369 |||||||| |||||||||||||||||||| Sbjct: 293 gacaagacttaccctgctggtttcatgga 321
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 113 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 172 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 79426 aggggtttgaagaagcatctgaagaggctcaatgcccccagccattggatgcttgacaag 79485 Query: 173 cttggtggagcttttg 188 ||||||||||| |||| Sbjct: 79486 cttggtggagcatttg 79501 Score = 99.6 bits (50), Expect = 8e-18 Identities = 146/178 (82%) Strand = Plus / Plus Query: 191 cccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctg 250 |||||||| || |||||||| ||||| || |||| ||| ||||| ||||||| ||||| Sbjct: 79760 cccaagccttcttctggtccccacaaagctcgggagtgcttgcctttgatccttatcctc 79819 Query: 251 aggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgt 310 |||||||| |||| |||||||| || |||||||| || || ||| | |||||||| Sbjct: 79820 aggaacaggttgaagtatgctctgacctaccgtgaggttatttccatcttgatgcagcgg 79879 Query: 311 catattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 368 ||| |||||||||||||||||||| | ||||||||||| || || ||||| ||||||| Sbjct: 79880 catgttatggttgatggaaaggtcaggactgacaagacttatccggctggattcatgg 79937
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 113 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 172 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 17549621 aggggtttgaagaagcatctgaagaggctcaatgcccccagccattggatgcttgacaag 17549680 Query: 173 cttggtggagcttttg 188 ||||||||||| |||| Sbjct: 17549681 cttggtggagcatttg 17549696 Score = 99.6 bits (50), Expect = 8e-18 Identities = 146/178 (82%) Strand = Plus / Plus Query: 191 cccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctg 250 |||||||| || |||||||| ||||| || |||| ||| ||||| ||||||| ||||| Sbjct: 17549955 cccaagccttcttctggtccccacaaagctcgggagtgcttgcctttgatccttatcctc 17550014 Query: 251 aggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgt 310 |||||||| |||| |||||||| || |||||||| || || ||| | |||||||| Sbjct: 17550015 aggaacaggttgaagtatgctctgacctaccgtgaggttatttccatcttgatgcagcgg 17550074 Query: 311 catattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 368 ||| |||||||||||||||||||| | ||||||||||| || || ||||| ||||||| Sbjct: 17550075 catgttatggttgatggaaaggtcaggactgacaagacttatccggctggattcatgg 17550132
>emb|BX832664.1|CNS09ZT5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH87ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 976 Score = 109 bits (55), Expect = 8e-21 Identities = 202/251 (80%) Strand = Plus / Plus Query: 119 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 178 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 7 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 66 Query: 179 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 238 || || || || ||||| ||||| ||||| ||||||||| | ||||| | || ||||| Sbjct: 67 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtttcttcctctt 126 Query: 239 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 298 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 127 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 186 Query: 299 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 358 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 187 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 246 Query: 359 ggtttcatgga 369 ||||||||||| Sbjct: 247 ggtttcatgga 257
>emb|BX832452.1|CNS09ZTE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 942 Score = 109 bits (55), Expect = 8e-21 Identities = 202/251 (80%) Strand = Plus / Plus Query: 119 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 178 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 11 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 70 Query: 179 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 238 || || || || ||||| ||||| ||||| ||||||||| | ||||| | || ||||| Sbjct: 71 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtttcttcctctt 130 Query: 239 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 298 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 131 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 190 Query: 299 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 358 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 191 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 250 Query: 359 ggtttcatgga 369 ||||||||||| Sbjct: 251 ggtttcatgga 261
>emb|BX832256.1|CNS09ZVR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZC05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 952 Score = 109 bits (55), Expect = 8e-21 Identities = 202/251 (80%) Strand = Plus / Plus Query: 119 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 178 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 2 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 61 Query: 179 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 238 || || || || ||||| ||||| ||||| ||||||||| | ||||| | || ||||| Sbjct: 62 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtatcttcctctt 121 Query: 239 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 298 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 122 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 181 Query: 299 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 358 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 182 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 241 Query: 359 ggtttcatgga 369 ||||||||||| Sbjct: 242 ggtttcatgga 252
>emb|BX818793.1|CNS0A8YY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB13ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 966 Score = 97.6 bits (49), Expect = 3e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 101 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 160 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 57 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 116 Query: 161 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 217 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct: 117 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaag 173 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 338 actgacaagacctaccctgctggtttcatggacattatttctattcccaa 387 ||||||||||| |||||||||||||||||||| || ||||||| ||||| Sbjct: 295 actgacaagacttaccctgctggtttcatggatgttgtttctatgcccaa 344
>gb|BT014201.1| Lycopersicon esculentum clone 133378R, mRNA sequence Length = 1292 Score = 79.8 bits (40), Expect = 7e-12 Identities = 214/272 (78%) Strand = Plus / Plus Query: 119 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 178 |||||||| ||| | |||||||||||||| || |||||||||||||| || || || Sbjct: 93 ttgaagaaacatttaaagaggctcaatgcgcctaagcattggatgcttgataaactcgga 152 Query: 179 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 238 || |||||||| |||||||| || |||||||| || || | |||||||| |||| || Sbjct: 153 ggtgcttttgctcccaagccttcttctggtccacataaatcaagggaatgtttgccattg 212 Query: 239 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 298 | | |||||||||||||| |||||||||| | ||||||||||| || |||||| Sbjct: 213 gttattatcctgaggaacaggttgaaatatgcgttgacgtaccgtgaggtcatttctatc 272 Query: 299 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 358 | ||||| || || ||||||||||||| || || | || | ||||| ||||||||| Sbjct: 273 ttgatgcaacgccaagttatggttgatgggaaagttagaacaggtaagacttaccctgct 332 Query: 359 ggtttcatggacattatttctattcccaagac 390 |||||||||||| || || ||||||| ||||| Sbjct: 333 ggtttcatggacgttgttactattccaaagac 364
>emb|BX831856.1|CNS09ZNQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH34ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 934 Score = 79.8 bits (40), Expect = 7e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 122 aagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgga 181 |||||||||||||||||||||||||| || | ||||||||||||||| |||||||| Sbjct: 14 aagaagcatctgaagaggctcaatgctcctgagcgttggatgcttgacaaacttggtggt 73 Query: 182 gcttttgcccccaagccatcatctggtcctcacaag 217 || || || ||||| ||||| ||||| ||||||||| Sbjct: 74 gccttcgctcccaaaccatcttctggacctcacaag 109 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 338 actgacaagacctaccctgctggtttcatgga 369 ||||| ||||| |||||||||||||||||||| Sbjct: 230 actgagaagacttaccctgctggtttcatgga 261
>dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ2 Length = 51440 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 113 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 172 ||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 5950 aggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgcttgacaaa 6009 Query: 173 cttggtgg 180 |||||||| Sbjct: 6010 cttggtgg 6017 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 320 gttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatttct 379 |||||||| || ||| | || ||||||||||||||||||||||||||||| || | ||| Sbjct: 6260 gttgatgggaaagtcaggacggacaagacctaccctgctggtttcatggatgttgtgtct 6319 Query: 380 attcccaagac 390 || |||||||| Sbjct: 6320 atccccaagac 6330
>gb|AC146554.5| Medicago truncatula clone mth2-9l7, complete sequence Length = 135334 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 188 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 247 ||||| ||||| |||||||| || ||||| | ||||| ||||| ||| ||||||| ||| Sbjct: 11566 gccccaaagccgtcatctggaccacacaaatctagggagtgccttcctttgatccttatc 11507 Query: 248 ctgaggaacagactgaaatatgctctcac 276 ||||||||||||| |||||||||||||| Sbjct: 11506 ttgaggaacagactaaaatatgctctcac 11478 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 116 ggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 175 ||||||||||| ||| ||||| |||||||||| || |||||||||||||| |||||| Sbjct: 11737 ggtttgaagaaacatttgaagcggctcaatgctccaaaacattggatgcttgataagctt 11678 Query: 176 ggtgg 180 ||||| Sbjct: 11677 ggtgg 11673
>gb|AC126779.19| Medicago truncatula clone mth2-34m14, complete sequence Length = 128856 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 116 ggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 175 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| | Sbjct: 82054 ggtttgaagaagcatttgaagaggctcaatgcccccaagcattggatgcttgacaaattg 82113 Query: 176 ggtggagcttttg 188 ||||| ||||||| Sbjct: 82114 ggtggtgcttttg 82126 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 200 tcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacaga 259 |||||||| || |||||| |||||||||| || || || || || ||| || | |||||| Sbjct: 82227 tcatctggaccacacaagtccagggaatgtctcccactcattctgatcttgcgaaacaga 82286 Query: 260 ctgaaatatgctctcacgtaccgtgaagt 288 |||| |||||||| || ||||||||||| Sbjct: 82287 ttgaagtatgctctaacataccgtgaagt 82315
>emb|BX833645.1|CNS0A1VP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL68ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 984 Score = 71.9 bits (36), Expect = 2e-09 Identities = 162/204 (79%) Strand = Plus / Plus Query: 166 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 225 |||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | ||||| Sbjct: 58 tgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcgaggga 117 Query: 226 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 285 || || ||||| |||| ||| | |||||||| |||| |||||| | || |||||||| Sbjct: 118 gtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtga 177 Query: 286 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 345 ||| |||||| | ||||| | ||||| |||||||| || ||| | |||||||| Sbjct: 178 agttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaa 237 Query: 346 gacctaccctgctggtttcatgga 369 ||| |||||||||||||||||||| Sbjct: 238 gacttaccctgctggtttcatgga 261
>emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, BAC clone T28J14 (ESSA project) Length = 104607 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 119 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 178 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 6994 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 7053 Query: 179 gg 180 || Sbjct: 7054 gg 7055 Score = 60.0 bits (30), Expect = 7e-06 Identities = 141/178 (79%) Strand = Plus / Plus Query: 191 cccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctg 250 ||||| ||||| ||||| ||||||||| | ||||| || || ||||| |||| ||| | Sbjct: 7174 cccaaaccatcttctggacctcacaagtcgagggagtgtcttcctcttgtcctgatcatc 7233 Query: 251 aggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgt 310 |||||||| |||| |||||| | || ||||||||||| |||||| | ||||| | Sbjct: 7234 aggaacaggttgaagtatgctttgacttaccgtgaagttatctctatcttgatgcaaagg 7293 Query: 311 catattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 368 ||||| |||||||| || ||| | ||||||||||| ||||||||||||||||||| Sbjct: 7294 catatccaagttgatggcaaagtcaggactgacaagacttaccctgctggtttcatgg 7351
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 296 atccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccct 355 ||||| |||||||||||| ||| |||||| || |||||| | ||||||| |||||||| Sbjct: 23697 atcctaatgcagcgtcatgttaaggttgacggtaaggtcagaactgacactacctaccca 23638 Query: 356 gctggtttcatgga 369 |||||||||||||| Sbjct: 23637 gctggtttcatgga 23624
>dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOJ9 Length = 86380 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 119 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 178 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 81717 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 81776 Query: 179 gg 180 || Sbjct: 81777 gg 81778 Score = 60.0 bits (30), Expect = 7e-06 Identities = 141/178 (79%) Strand = Plus / Plus Query: 191 cccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctg 250 ||||| ||||| ||||| ||||||||| | ||||| || || ||||| |||| ||| | Sbjct: 81897 cccaaaccatcttctggacctcacaagtcgagggagtgtcttcctcttgtcctgatcatc 81956 Query: 251 aggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgt 310 |||||||| |||| |||||| | || ||||||||||| |||||| | ||||| | Sbjct: 81957 aggaacaggttgaagtatgctttgacttaccgtgaagttatctctatcttgatgcaaagg 82016 Query: 311 catattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 368 ||||| |||||||| || ||| | ||||||||||| ||||||||||||||||||| Sbjct: 82017 catatccaagttgatggcaaagtcaggactgacaagacttaccctgctggtttcatgg 82074
>ref|NM_209058.1| Eremothecium gossypii ADL391Cp (ADL391C), mRNA Length = 786 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 296 atccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccct 355 ||||| |||||||||||| ||| |||||| || |||||| | ||||||| |||||||| Sbjct: 190 atcctaatgcagcgtcatgttaaggttgacggtaaggtcagaactgacactacctaccca 249 Query: 356 gctggtttcatgga 369 |||||||||||||| Sbjct: 250 gctggtttcatgga 263
>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete sequence. Sequence from clones T23A1, F5J6, MJB20 Length = 76170 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 116 ggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 175 ||||||||||||||| |||||||||||||||| || |||||||||||||| || ||| Sbjct: 47817 ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 47876 Query: 176 ggtgg 180 ||||| Sbjct: 47877 ggtgg 47881 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 338 actgacaagacctaccctgctggtttcatgg 368 ||||||||||| ||||||||||||||||||| Sbjct: 48122 actgacaagacttaccctgctggtttcatgg 48152
>emb|AL583828.4| Human DNA sequence from clone RP11-501I19 on chromosome 6 Contains a novel gene (ortholog of human ADG-90), the 5' end of a novel gene (FLJ20330), a novel gene, a ribosomal protein s4x (Rps4x) pseudogene and three CpG islands, complete sequence Length = 124659 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| |||||||| |||||||||||||| |||||||| Sbjct: 77167 gatggcaaggtccgaactgacaaaacctaccctgctggattcatgga 77213
>emb|BX830139.1|CNS09ZZ0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 737 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 320 gttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatttct 379 |||||||| || ||| | || ||||||||||||||||||||||||||||| || | ||| Sbjct: 27 gttgatgggaaagtcaggacggacaagacctaccctgctggtttcatggatgttgtgtct 86 Query: 380 attcccaagac 390 || |||||||| Sbjct: 87 atccccaagac 97
>gb|AC010305.3|AC010305 Homo sapiens chromosome 16 clone CTB-45A8, complete sequence Length = 121575 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| |||||||| |||||||||||||| |||||||| Sbjct: 38935 gatggcaaggtccgaactgacaaaacctaccctgctggattcatgga 38889
>ref|XM_986316.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC229746), mRNA Length = 908 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 126 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 185 Query: 264 aatatg 269 |||||| Sbjct: 186 aatatg 191
>ref|XM_124146.6| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC229746), mRNA Length = 908 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 126 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 185 Query: 264 aatatg 269 |||||| Sbjct: 186 aatatg 191
>gb|AC131731.4| Mus musculus BAC clone RP23-117K10 from 3, complete sequence Length = 200232 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 17770 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 17829 Query: 264 aatatg 269 |||||| Sbjct: 17830 aatatg 17835
>gb|AC140323.3| Mus musculus BAC clone RP24-325G15 from 3, complete sequence Length = 182942 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 175838 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 175897 Query: 264 aatatg 269 |||||| Sbjct: 175898 aatatg 175903
>ref|XM_657306.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4794.2), mRNA Length = 720 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 329 aaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||||||||||||| |||||||||||| ||||||||||| Sbjct: 157 aaggtccgcactgacccgacctaccctgccggtttcatgga 197
>ref|XM_536580.2| PREDICTED: Canis familiaris ribosomal protein S4, transcript variant 1 (RPS4), mRNA Length = 865 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 301 tatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctgg 360 |||||||||| ||||| | ||||||| |||||||| ||||| | |||||||||||||| Sbjct: 206 tatgcagcgttttattaagattgatggcaaggtccgaactgatatcacctaccctgctgg 265 Query: 361 tttcatgga 369 ||| ||||| Sbjct: 266 ttttatgga 274
>ref|XM_844428.1| PREDICTED: Canis familiaris ribosomal protein S4, transcript variant 2 (RPS4), mRNA Length = 1129 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 301 tatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctgg 360 |||||||||| ||||| | ||||||| |||||||| ||||| | |||||||||||||| Sbjct: 470 tatgcagcgttttattaagattgatggcaaggtccgaactgatatcacctaccctgctgg 529 Query: 361 tttcatgga 369 ||| ||||| Sbjct: 530 ttttatgga 538
>ref|XM_537399.2| PREDICTED: Canis familiaris similar to 40S ribosomal protein S4, X isoform (LOC480276), mRNA Length = 854 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 301 tatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctgg 360 |||||||||| ||||| | ||||||| |||||||| ||||| | |||||||||||||| Sbjct: 214 tatgcagcgttttattaagattgatggcaaggtccgaactgatataacctaccctgctgg 273 Query: 361 tttcatgga 369 ||| ||||| Sbjct: 274 ttttatgga 282
>emb|BX824247.1|CNS0A6X1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1168 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 320 gttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 368 |||||||| || ||| | ||||||||||| ||||||||||||||||||| Sbjct: 947 gttgatggcaaagtcaggactgacaagacttaccctgctggtttcatgg 899
>gb|U22232.1|FCU22232 Felis domesticus ribosomal protein S4 mRNA, partial cds Length = 853 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 301 tatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctgg 360 |||||||||| ||||| | ||||||| |||||||| ||||| | |||||||||||||| Sbjct: 192 tatgcagcgttttattaagattgatggcaaggtccgaactgatataacctaccctgctgg 251 Query: 361 tttcatgga 369 ||| ||||| Sbjct: 252 ttttatgga 260
>dbj|D50108.1| Canis familiaris mRNA for ribosomal protein S4, partial cds Length = 581 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 301 tatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctgg 360 |||||||||| ||||| | ||||||| |||||||| ||||| | |||||||||||||| Sbjct: 138 tatgcagcgttttattaagattgatggcaaggtccgaactgatatcacctaccctgctgg 197 Query: 361 tttcatgga 369 ||| ||||| Sbjct: 198 ttttatgga 206
>dbj|D50106.1| Felis catus mRNA for ribosomal protein S4, partial cds Length = 581 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 301 tatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctgg 360 |||||||||| ||||| | ||||||| |||||||| ||||| | |||||||||||||| Sbjct: 138 tatgcagcgttttattaagattgatggcaaggtccgaactgatataacctaccctgctgg 197 Query: 361 tttcatgga 369 ||| ||||| Sbjct: 198 ttttatgga 206
>gb|BC106152.1| Mus musculus ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:118104 IMAGE:3669367), complete cds Length = 917 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 105 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 164 Query: 264 aatatgc 270 | ||||| Sbjct: 165 agtatgc 171
>gb|BC009100.1| Mus musculus ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:6575 IMAGE:3482299), complete cds Length = 925 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 129 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 188 Query: 264 aatatgc 270 | ||||| Sbjct: 189 agtatgc 195
>ref|NM_009094.1| Mus musculus ribosomal protein S4, X-linked (Rps4x), mRNA Length = 885 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 104 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 163 Query: 264 aatatgc 270 | ||||| Sbjct: 164 agtatgc 170
>ref|XR_002810.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC670119), mRNA Length = 962 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 115 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 174 Query: 264 aatatgc 270 | ||||| Sbjct: 175 agtatgc 181
>ref|XR_004627.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC674228), mRNA Length = 959 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 115 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 174 Query: 264 aatatgc 270 | ||||| Sbjct: 175 agtatgc 181
>ref|XR_002019.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC667398), mRNA Length = 962 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 115 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 174 Query: 264 aatatgc 270 | ||||| Sbjct: 175 agtatgc 181
>ref|XM_001004419.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform, transcript variant 2 (LOC668668), mRNA Length = 876 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 110 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 169 Query: 264 aatatgc 270 | ||||| Sbjct: 170 agtatgc 176
>ref|XM_001004416.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform, transcript variant 1 (LOC668668), mRNA Length = 829 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 123 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 182 Query: 264 aatatgc 270 | ||||| Sbjct: 183 agtatgc 189
>ref|XM_916606.2| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform, transcript variant 1 (LOC637070), mRNA Length = 888 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 123 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 182 Query: 264 aatatgc 270 | ||||| Sbjct: 183 agtatgc 189
>gb|AC122379.4| Mus musculus BAC clone RP23-476A7 from chromosome 13, complete sequence Length = 171737 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 23328 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 23387 Query: 264 aatatgc 270 | ||||| Sbjct: 23388 agtatgc 23394
>gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, complete sequence Length = 195549 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 117114 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 117055 Query: 264 aatatgc 270 | ||||| Sbjct: 117054 agtatgc 117048
>emb|AL133396.2| Human DNA sequence from clone RP5-1068H6 on chromosome 20p12.1-13 Contains part of a ribosomal protein S4 pseudogene, the PRNP gene for prion protein (p27-30) (Creutzfeld-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia), the PRND gene for prion protein 2 (dublet), a novel gene, an isopentenyl-diphosphate delta isomerase 1 (IDI1) pseudogene and two CpG islands, complete sequence Length = 148497 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||||||||| | |||||||||||||| |||||||| Sbjct: 396 gatggcaaggtccgcactgatataacctaccctgctggattcatgga 350
>gb|AF402812.1| Ictalurus punctatus 40S ribosomal protein S4 mRNA, complete cds Length = 861 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||||||||||| |||||||||||||| || ||||| Sbjct: 225 gatggcaaggtccgcactgacatcacctaccctgctggatttatgga 271
>dbj|AK135369.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820407G10 product:ribosomal protein S4, X-linked, full insert sequence Length = 907 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 125 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 184 Query: 264 aatatgc 270 | ||||| Sbjct: 185 agtatgc 191
>dbj|AK153211.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830127J02 product:ribosomal protein S4, X-linked, full insert sequence Length = 897 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 116 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 175 Query: 264 aatatgc 270 | ||||| Sbjct: 176 agtatgc 182
>dbj|AK010921.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510006L12 product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus aethiops], full insert sequence Length = 903 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181 Query: 264 aatatgc 270 | ||||| Sbjct: 182 agtatgc 188
>dbj|AK010676.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410045N08 product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus aethiops], full insert sequence Length = 898 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181 Query: 264 aatatgc 270 | ||||| Sbjct: 182 agtatgc 188
>dbj|AK010624.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410030O13 product:ribosomal protein S4, X-linked, full insert sequence Length = 906 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 125 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 184 Query: 264 aatatgc 270 | ||||| Sbjct: 185 agtatgc 191
>dbj|AK088410.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430016A18 product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus aethiops], full insert sequence Length = 898 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181 Query: 264 aatatgc 270 | ||||| Sbjct: 182 agtatgc 188
>dbj|AK002445.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610010B10 product:ribosomal protein S4, X-linked, full insert sequence Length = 903 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181 Query: 264 aatatgc 270 | ||||| Sbjct: 182 agtatgc 188
>dbj|AK012429.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700054P13 product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus aethiops], full insert sequence Length = 902 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181 Query: 264 aatatgc 270 | ||||| Sbjct: 182 agtatgc 188
>ref|NG_000950.1| Homo sapiens ribosomal protein S4-like 2 (RPS4L2) pseudogene on chromosome 20 Length = 712 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||||||||| | |||||||||||||| |||||||| Sbjct: 317 gatggcaaggtccgcactgatataacctaccctgctggattcatgga 363
>dbj|AK014210.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110053C10 product:ribosomal protein S4, X-linked, full insert sequence Length = 901 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 120 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 179 Query: 264 aatatgc 270 | ||||| Sbjct: 180 agtatgc 186
>gb|AC027653.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-166J14, complete sequence Length = 174990 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 83378 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 83319 Query: 264 aatatgc 270 | ||||| Sbjct: 83318 agtatgc 83312
>gb|AC124744.3| Mus musculus BAC clone RP23-223E16 from 13, complete sequence Length = 199767 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 16416 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 16357 Query: 264 aatatgc 270 | ||||| Sbjct: 16356 agtatgc 16350
>gb|BC089349.1| Mus musculus cDNA clone MGC:102174 IMAGE:6819603, complete cds Length = 909 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 107 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 166 Query: 264 aatatgc 270 | ||||| Sbjct: 167 agtatgc 173
>dbj|D11087.1|HAMRPS4 Mesocricetus sp. RPS4 mRNA for ribosomal protein S4, complete cds Length = 970 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||| ||||||||| |||||||| |||||||||||| | |||||||||||||||| | Sbjct: 119 ctggccctcacaagctgagggaatgtctgcctctgatcattttcctgaggaacagactta 178 Query: 264 aatatgc 270 | ||||| Sbjct: 179 agtatgc 185
>emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on chromosome X, complete sequence Length = 146713 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 7666 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 7607 Query: 264 aatatgc 270 | ||||| Sbjct: 7606 agtatgc 7600
>gb|BC089348.1| Mus musculus cDNA clone IMAGE:5709768, containing frame-shift errors Length = 919 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 107 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 166 Query: 264 aatatgc 270 | ||||| Sbjct: 167 agtatgc 173
>gb|M73436.1|MUSRSP4 Mouse ribosomal protein S4 (Rps4) mRNA, complete CDS Length = 885 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 104 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 163 Query: 264 aatatgc 270 | ||||| Sbjct: 164 agtatgc 170
>gb|BC086560.1| Rattus norvegicus ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:105788 IMAGE:7303578), complete cds Length = 915 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgc 270 ||||||||||||||||||||| | |||| ||||||||||| || ||||| Sbjct: 115 agggaatgcctgcctctgatcattttcctaaggaacagacttaagtatgc 164
>ref|XR_004017.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC434180), mRNA Length = 892 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 261 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 124 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 181
>ref|XM_749829.1| Aspergillus fumigatus Af293 cytosolic small ribosomal subunit S4 (Afu3g06840) partial mRNA Length = 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 329 aaggtccgcactgacaagacctaccctgctggtttcatggac 370 ||||||||||||||| |||||||| ||||||||||||||| Sbjct: 223 aaggtccgcactgaccctacctaccccgctggtttcatggac 264
>ref|NM_001007600.1| Rattus norvegicus ribosomal protein S4, X-linked (Rps4x), mRNA Length = 915 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgc 270 ||||||||||||||||||||| | |||| ||||||||||| || ||||| Sbjct: 115 agggaatgcctgcctctgatcattttcctaaggaacagacttaagtatgc 164
>emb|X14210.1|RNRPS4 Rat mRNA for ribosomal protein S4 Length = 907 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgc 270 ||||||||||||||||||||| | |||| ||||||||||| || ||||| Sbjct: 136 agggaatgcctgcctctgatcattttcctaaggaacagacttaagtatgc 185
>ref|XM_509549.1| PREDICTED: Pan troglodytes similar to 40S ribosomal protein S4, X isoform (LOC452446), mRNA Length = 535 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 321 ttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 146 ttgatggcaaggtccgaactgatataacctaccctgctgggttcatgga 194
>ref|XM_865957.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S4, X isoform (LOC614449), mRNA Length = 828 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 321 ttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||||| || ||||||||||| | ||||||||||||||||| ||||| Sbjct: 226 ttgatggcaaagtccgcactgatataacctaccctgctggttttatgga 274
>gb|AY389948.1| Protopterus dolloi ribosomal protein S4 mRNA, partial cds Length = 715 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 321 ttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||||| ||||||||||| |||| ||||| ||| ||||||||||||| Sbjct: 186 ttgatggtaaggtccgcaccgacatcacctatccttctggtttcatgga 234
>ref|XR_003920.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC635803), mRNA Length = 788 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 222 gggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctct 273 |||||||||||||| ||||| | |||| ||||||||||| || |||||||| Sbjct: 116 gggaatgcctgcctatgatcattttcctaaggaacagacttaagtatgctct 167
>ref|XR_002186.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC635803), mRNA Length = 788 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 222 gggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctct 273 |||||||||||||| ||||| | |||| ||||||||||| || |||||||| Sbjct: 116 gggaatgcctgcctatgatcattttcctaaggaacagacttaagtatgctct 167
>ref|XM_446360.1| Candida glabrata CBS138, CAGL0F09031g partial mRNA Length = 786 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 302 atgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggt 361 ||||| |||||| ||| |||||| || |||||| | |||||| |||||||| |||||| Sbjct: 196 atgcaacgtcatgttaaggttgacggtaaggtcagaactgacgctacctacccagctggt 255 Query: 362 ttcatgga 369 |||||||| Sbjct: 256 ttcatgga 263
>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence Length = 927101 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Minus Query: 302 atgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggt 361 ||||| |||||| ||| |||||| || |||||| | |||||| |||||||| |||||| Sbjct: 886108 atgcaacgtcatgttaaggttgacggtaaggtcagaactgacgctacctacccagctggt 886049 Query: 362 ttcatgga 369 |||||||| Sbjct: 886048 ttcatgga 886041
>emb|CR609307.1| full-length cDNA clone CS0DH003YG13 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 798 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 314 attatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 |||| ||||||||| ||||| || ||||| | |||||||||||||| |||||||| Sbjct: 203 attaaggttgatggcaaggtacgaactgatataacctaccctgctggattcatgga 258
>gb|AC008925.4| Homo sapiens chromosome 5 clone CTD-2284O10, complete sequence Length = 131990 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 314 attatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 |||| ||||||||| ||||| || ||||| | |||||||||||||| |||||||| Sbjct: 49760 attaaggttgatggcaaggtacgaactgatataacctaccctgctggattcatgga 49815
>gb|AC137755.5| Mus musculus chromosome 1, clone RP24-279G1, complete sequence Length = 153471 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Minus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacaga 259 |||||||||||||| ||||||||| ||||||||||| | |||| ||||||||| Sbjct: 31001 ctggtcctcacaagctgagggaatgcttgcctctgatcattttcctaaggaacaga 30946
>emb|BX539316.6| Mouse DNA sequence from clone RP24-216F23 on chromosome 7, complete sequence Length = 178673 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 222 gggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctct 273 |||||||||||||| ||||| | |||| ||||||||||| || |||||||| Sbjct: 66672 gggaatgcctgcctatgatcattttcctaaggaacagacttaagtatgctct 66723
>emb|AL627393.13| Mouse DNA sequence from clone RP23-154M2 on chromosome 4, complete sequence Length = 78456 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Minus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacaga 259 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||| Sbjct: 2094 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacaga 2039
>ref|XM_521131.1| PREDICTED: Pan troglodytes similar to 40S ribosomal protein S4, X isoform (LOC465710), mRNA Length = 863 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 226 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 272
>gb|BC000472.2| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:8636 IMAGE:2961540), complete cds Length = 889 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 225 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 271
>gb|BC007308.1| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone IMAGE:3352599), partial cds Length = 822 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 157 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 203
>ref|XR_002591.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC546380), mRNA Length = 917 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| |||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 125 ctggtcctcacaagctgagggaatgcctgcctcccatcattttcctaaggaacagactta 184 Query: 264 aatatgc 270 | ||||| Sbjct: 185 agtatgc 191
>ref|XR_002550.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC225134), mRNA Length = 936 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| |||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 121 ctggtcctcacaagctgagggaatgcctgcctcccatcattttcctaaggaacagactta 180 Query: 264 aatatgc 270 | ||||| Sbjct: 181 agtatgc 187
>ref|XR_003977.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC672743), mRNA Length = 928 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| |||||||||| |||||| ||| | |||| ||||||||||| | Sbjct: 98 ctggtcctcacaagctgagggaatgcccgcctctcatcattttcctaaggaacagactta 157 Query: 264 aatatgc 270 | ||||| Sbjct: 158 agtatgc 164
>gb|BC000236.1| Homo sapiens translin-associated factor X, mRNA (cDNA clone IMAGE:3351964), **** WARNING: chimeric clone **** Length = 2323 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 1642 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 1688
>ref|NM_001007.3| Homo sapiens ribosomal protein S4, X-linked (RPS4X), mRNA Length = 977 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 313 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 359
>gb|BC100904.1| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:119099 IMAGE:40003601), complete cds Length = 792 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 217 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 263
>gb|BC100903.1| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:119098 IMAGE:40003600), complete cds Length = 792 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 217 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 263
>emb|CR601794.1| full-length cDNA clone CS0DI031YB06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 858 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261
>emb|CR623958.1| full-length cDNA clone CS0DE004YB10 of Placenta of Homo sapiens (human) Length = 1896 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261
>emb|CR620411.1| full-length cDNA clone CS0DE011YG15 of Placenta of Homo sapiens (human) Length = 1386 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261
>dbj|AK097914.1| Homo sapiens cDNA FLJ40595 fis, clone THYMU2010705, highly similar to 40S RIBOSOMAL PROTEIN S4, X ISOFORM Length = 2747 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 2114 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 2160
>emb|CR597791.1| full-length cDNA clone CS0DI068YM24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 848 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261
>emb|CR595707.1| full-length cDNA clone CL0BB017ZH01 of Neuroblastoma of Homo sapiens (human) Length = 858 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261
>emb|CR456735.1| Homo sapiens full open reading frame cDNA clone RZPDo834G036D for gene RPS4X, ribosomal protein S4, X-linked; complete cds, incl. stopcodon Length = 792 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 217 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 263
>dbj|AK222479.1| Homo sapiens mRNA for ribosomal protein S4, X-linked X isoform variant, clone: adKA01615 Length = 900 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 242 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 288
>emb|AL929051.24| Mouse DNA sequence from clone RP23-418P21 on chromosome 2, complete sequence Length = 148072 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Minus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| |||||||||| |||||| ||| | |||| ||||||||||| | Sbjct: 62374 ctggtcctcacaagctgagggaatgcccgcctctcatcattttcctaaggaacagactta 62315 Query: 264 aatatgc 270 | ||||| Sbjct: 62314 agtatgc 62308
>gb|BC071662.1| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:87857 IMAGE:5505465), complete cds Length = 905 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 254 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 300
>gb|AC148013.3| Mus musculus BAC clone RP23-134C2 from 18, complete sequence Length = 192504 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Minus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| |||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 102468 ctggtcctcacaagctgagggaatgcctgcctcccatcattttcctaaggaacagactta 102409 Query: 264 aatatgc 270 | ||||| Sbjct: 102408 agtatgc 102402
>gb|M58458.1|HUMRPS4X Human ribosomal protein S4 (RPS4X) isoform mRNA, complete cds Length = 888 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 252 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 298
>gb|M22146.1|HUMSCAR Human scar protein mRNA, complete cds Length = 864 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 222 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 268
>dbj|AB024285.1| Macaca fuscata mRNA for ribosomal protein S4X (RPS4X), complete cds Length = 853 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 217 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 263
>dbj|D50104.1| Macaca fuscata mRNA for ribosomal protein S4, partial cds Length = 581 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 160 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 206
>dbj|AB015610.1| Chlorocebus aethiops mRNA for ribosomal protein S4X, complete cds Length = 878 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 240 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 286
>emb|AL731648.6| Mouse DNA sequence from clone RP23-35I10 on chromosome X, complete sequence Length = 119995 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Minus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 263 |||||||||||||| |||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 90006 ctggtcctcacaagctgagggaatgcctgcctcccatcattttcctaaggaacagactta 89947 Query: 264 aatatgc 270 | ||||| Sbjct: 89946 agtatgc 89940
>emb|AL135749.3|HSN14 Homo sapiens chromosome X sequence from BAC CEPHB197N14 region PHKA1-DXS227 map Xq13, complete sequence Length = 156655 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Minus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 368 ||||| |||||||| ||||| | |||||||||||||| ||||||| Sbjct: 89478 gatggcaaggtccgaactgatataacctaccctgctggattcatgg 89433
>dbj|AB226297.1| Aspergillus oryzae cDNA, contig sequence: AoEST3159 Length = 1183 Score = 44.1 bits (22), Expect = 0.41 Identities = 37/42 (88%) Strand = Plus / Plus Query: 329 aaggtccgcactgacaagacctaccctgctggtttcatggac 370 ||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 287 aaggtccgcactgaccctaccttccccgctggtttcatggac 328
>dbj|AB225754.1| Aspergillus oryzae cDNA, contig sequence: AoEST2609 Length = 644 Score = 44.1 bits (22), Expect = 0.41 Identities = 37/42 (88%) Strand = Plus / Plus Query: 329 aaggtccgcactgacaagacctaccctgctggtttcatggac 370 ||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 270 aaggtccgcactgaccctaccttccccgctggtttcatggac 311
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 44.1 bits (22), Expect = 0.41 Identities = 37/42 (88%) Strand = Plus / Minus Query: 329 aaggtccgcactgacaagacctaccctgctggtttcatggac 370 ||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 776621 aaggtccgcactgaccctaccttccccgctggtttcatggac 776580
>gb|AF511169.1| Sus scrofa clone UMNp272 microsatellite sequence Length = 299 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 aagcttggtggagcttttgccc 191 |||||||||||||||||||||| Sbjct: 203 aagcttggtggagcttttgccc 182
>gb|AF041428.1|AF041428 Homo sapiens ribosomal protein s4 X isoform gene, complete cds Length = 8542 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 368 ||||| |||||||| ||||| | |||||||||||||| ||||||| Sbjct: 3473 gatggcaaggtccgaactgatataacctaccctgctggattcatgg 3518
>ref|XM_536183.2| PREDICTED: Canis familiaris similar to 40S ribosomal protein S4, X isoform, transcript variant 1 (LOC479033), mRNA Length = 884 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 321 ttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||||| ||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 230 ttgatggcaaggtccaaactgatatcacctaccctgctggttttatgga 278
>ref|XM_854470.1| PREDICTED: Canis familiaris similar to 40S ribosomal protein S4, X isoform, transcript variant 2 (LOC479033), mRNA Length = 751 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 321 ttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 369 ||||||| ||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 217 ttgatggcaaggtccaaactgatatcacctaccctgctggttttatgga 265
>gb|AC016587.9| Homo sapiens chromosome 19 clone CTD-2632B17, complete sequence Length = 155221 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 96136 tcctgaggaacagacttaaatatgc 96112
>emb|CR626797.1| full-length cDNA clone CS0DI054YI11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 833 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 135 tcctgaggaacagacttaaatatgc 159
>emb|CR625616.1| full-length cDNA clone CS0DI069YN19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 833 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 135 tcctgaggaacagacttaaatatgc 159
>emb|CR622909.1| full-length cDNA clone CS0DE004YN04 of Placenta of Homo sapiens (human) Length = 805 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 142 tcctgaggaacagacttaaatatgc 166
>emb|CR620106.1| full-length cDNA clone CS0DC024YK24 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 833 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 135 tcctgaggaacagacttaaatatgc 159
>emb|CR619631.1| full-length cDNA clone CS0DF020YI03 of Fetal brain of Homo sapiens (human) Length = 804 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 135 tcctgaggaacagacttaaatatgc 159
>emb|CR618319.1| full-length cDNA clone CS0DI014YL14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 826 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 128 tcctgaggaacagacttaaatatgc 152
>emb|CR617295.1| full-length cDNA clone CS0DA002YL24 of Neuroblastoma of Homo sapiens (human) Length = 829 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 135 tcctgaggaacagacttaaatatgc 159
>emb|CR609771.1| full-length cDNA clone CS0DE006YJ15 of Placenta of Homo sapiens (human) Length = 831 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 135 tcctgaggaacagacttaaatatgc 159
>emb|CR606605.1| full-length cDNA clone CS0DJ012YL04 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 835 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 135 tcctgaggaacagacttaaatatgc 159
>emb|CR603462.1| full-length cDNA clone CS0DJ007YB09 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 831 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 142 tcctgaggaacagacttaaatatgc 166
>emb|CR602023.1| full-length cDNA clone CS0DL001YJ20 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 853 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 171 tcctgaggaacagacttaaatatgc 195
>emb|CR597212.1| full-length cDNA clone CS0DF028YL05 of Fetal brain of Homo sapiens (human) Length = 833 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 135 tcctgaggaacagacttaaatatgc 159
>emb|CR594080.1| full-length cDNA clone CS0DE007YF24 of Placenta of Homo sapiens (human) Length = 800 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 tcctgaggaacagactgaaatatgc 270 |||||||||||||||| |||||||| Sbjct: 135 tcctgaggaacagacttaaatatgc 159
>gb|DQ333035.1| Synthetic construct Saccharomyces cerevisiae clone FLH115330.01X RPS4B gene, complete sequence Length = 1055 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 338 actgacaagacctaccctgctggtttcatggac 370 ||||||| |||||||| ||||||||||||||| Sbjct: 501 actgacaccacctacccagctggtttcatggac 533
>gb|U48451.1|HUMRYR03 Human skeletal muscle ryanodine receptor gene (RYR1), exon 3 Length = 954 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 36 agaggagaaggagcaggcggcgggg 60 ||||||||||||||||||| ||||| Sbjct: 869 agaggagaaggagcaggcgtcgggg 845
>gb|U00030.1|YSCH9998 Saccharomyces cerevisiae chromosome VIII cosmid 9998 Length = 35600 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 338 actgacaagacctaccctgctggtttcatggac 370 ||||||| |||||||| ||||||||||||||| Sbjct: 31858 actgacaccacctacccagctggtttcatggac 31826
>gb|M64294.1|YSCRPS7A S.cerevisiae ribosomal protein S7 gene, exons 1 and 2 Length = 1169 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 338 actgacaagacctaccctgctggtttcatggac 370 ||||||| |||||||| ||||||||||||||| Sbjct: 575 actgacaccacctacccagctggtttcatggac 607
>dbj|D50110.1| Porcine mRNA for ribosomal protein S4, partial cds Length = 581 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 329 aaggtccgcactgacaagacctaccctgctggtttcatgga 369 |||||||||||||| | |||||||| |||||||| ||||| Sbjct: 166 aaggtccgcactgatataacctaccccgctggttttatgga 206
>dbj|D50109.1| Equus caballus mRNA for ribosomal protein S4, partial cds Length = 581 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 329 aaggtccgcactgacaagacctaccctgctggtttcatgga 369 |||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 166 aaggtccgaactgatataacctaccctgctggttttatgga 206
>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence Length = 178764 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 ccaagccatcatctggtcct 211 |||||||||||||||||||| Sbjct: 127679 ccaagccatcatctggtcct 127660
>gb|AC110035.8| Mus musculus chromosome 1, clone RP23-237M24, complete sequence Length = 172559 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 ccaagccatcatctggtcct 211 |||||||||||||||||||| Sbjct: 1512 ccaagccatcatctggtcct 1493
>gb|BC081584.1| Danio rerio ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:92076 IMAGE:7046733), complete cds Length = 888 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccc 354 ||||| |||||||||||||||| |||||||| Sbjct: 224 gatggcaaggtccgcactgacatcacctaccc 255
>gb|AC169500.3| Mus musculus chromosome 5, clone wi1-1024F3, complete sequence Length = 45013 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gggtttgaagaagcatctga 134 |||||||||||||||||||| Sbjct: 30049 gggtttgaagaagcatctga 30068
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gatggaaaggtccgcactga 342 |||||||||||||||||||| Sbjct: 2447214 gatggaaaggtccgcactga 2447195
>ref|XM_529275.1| PREDICTED: Pan troglodytes similar to RPS4Y2 (LOC473900), mRNA Length = 2259 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 taccctgctggtttcatggacatt 373 ||||||||||| |||||||||||| Sbjct: 1564 taccctgctggattcatggacatt 1587
>ref|XM_523868.1| PREDICTED: Pan troglodytes similar to 40S ribosomal protein S4, X isoform (LOC468479), mRNA Length = 1281 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 acctaccctgctggtttcatggac 370 |||||||||||||| ||||||||| Sbjct: 541 acctaccctgctggattcatggac 564
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gatggaaaggtccgcactga 342 |||||||||||||||||||| Sbjct: 2448079 gatggaaaggtccgcactga 2448060
>ref|XM_959158.1| Neurospora crassa OR74A ribosomal protein YS7 (NCU02181.1) partial mRNA Length = 450 Score = 40.1 bits (20), Expect = 6.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatggac 370 ||||| ||||||||||| |||| |||||||| || || ||||||||| Sbjct: 226 gatggcaaggtccgcaccgacatcacctaccccgccggcttcatggac 273
>ref|XM_329370.1| Neurospora crassa OR74A hypothetical protein ( ribosomal protein YS7 homolog - Emericella nidulans ) (NCU02181.1) partial mRNA Length = 450 Score = 40.1 bits (20), Expect = 6.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccctgctggtttcatggac 370 ||||| ||||||||||| |||| |||||||| || || ||||||||| Sbjct: 226 gatggcaaggtccgcaccgacatcacctaccccgccggcttcatggac 273
>gb|AC132344.3| Mus musculus BAC clone RP24-177A17 from chromosome 13, complete sequence Length = 169661 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacaga 259 |||||||||||| | ||||||||||||||||| ||| | |||| ||||||||| Sbjct: 23522 ctggtcctcacaggctgagggaatgcctgcctctcatcattttcctaaggaacaga 23577
>ref|XM_752878.1| Ustilago maydis 521 hypothetical protein (UM01824.1) partial mRNA Length = 924 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 gcggcgcgtagcagaggaga 43 |||||||||||||||||||| Sbjct: 258 gcggcgcgtagcagaggaga 277
>gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome 13, complete sequence Length = 186870 Score = 40.1 bits (20), Expect = 6.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 204 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacaga 259 |||||||||||| | ||||||||||||||||| ||| | |||| ||||||||| Sbjct: 169016 ctggtcctcacaggctgagggaatgcctgcctctcatcattttcctaaggaacaga 169071
>ref|XM_815772.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508479.280) partial mRNA Length = 1104 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tagcagaggagaaggagcag 51 |||||||||||||||||||| Sbjct: 695 tagcagaggagaaggagcag 714
>ref|NM_001005589.1| Danio rerio ribosomal protein S4, X-linked (rps4x), mRNA Length = 888 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 323 gatggaaaggtccgcactgacaagacctaccc 354 ||||| |||||||||||||||| |||||||| Sbjct: 224 gatggcaaggtccgcactgacatcacctaccc 255
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ggagaaggagcaggcggcgg 58 |||||||||||||||||||| Sbjct: 27373 ggagaaggagcaggcggcgg 27392
>emb|AL023594.2|SPBC19F8 S.pombe chromosome II cosmid c19F8 Length = 16999 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 294 ctatccttatgcagcgtcatattatggttgatggaaaggt 333 ||||||||||||| |||| |||| ||| ||||||||||| Sbjct: 16107 ctatccttatgcaacgtctcattaaggtagatggaaaggt 16146
>emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 in linkage group 20, complete sequence Length = 86384 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tcatggacattatttctatt 382 |||||||||||||||||||| Sbjct: 3419 tcatggacattatttctatt 3400
>dbj|AK148570.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120409G09 product:unclassifiable, full insert sequence Length = 2900 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 ccaagccatcatctggtcct 211 |||||||||||||||||||| Sbjct: 243 ccaagccatcatctggtcct 224
>emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in linkage group 15, complete sequence Length = 164720 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 tttcatggacattatttcta 380 |||||||||||||||||||| Sbjct: 93781 tttcatggacattatttcta 93800
>gb|AY857461.1| Suberites domuncula S4 mRNA, complete cds Length = 786 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cattggatgcttgacaagct 174 |||||||||||||||||||| Sbjct: 49 cattggatgcttgacaagct 68
>emb|CR391662.1| Gallus gallus finished cDNA, clone ChEST418k16 Length = 856 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaa 264 ||||||||||| || |||||| || ||||| ||||||| ||||| Sbjct: 123 agggaatgcctcccgctgatcatcttcctgcggaacaggctgaa 166
>ref|NM_001022270.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC19F8.08), partial mRNA Length = 789 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 294 ctatccttatgcagcgtcatattatggttgatggaaaggt 333 ||||||||||||| |||| |||| ||| ||||||||||| Sbjct: 188 ctatccttatgcaacgtctcattaaggtagatggaaaggt 227
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 36 agaggagaaggagcaggcggcgggggtg 63 |||||||||||||| |||||||| |||| Sbjct: 7214543 agaggagaaggagccggcggcggcggtg 7214516
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaagaggagaagcacggcga 86 |||||||||||||||||||| Sbjct: 16168156 gaagaggagaagcacggcga 16168137
>gb|AC012592.10| Homo sapiens BAC clone RP11-381F16 from 2, complete sequence Length = 155682 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 aagtgcaatctatccttatg 304 |||||||||||||||||||| Sbjct: 129009 aagtgcaatctatccttatg 129028
>emb|BX930717.1| Gallus gallus finished cDNA, clone ChEST374l2 Length = 805 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaa 264 ||||||||||| || |||||| || ||||| ||||||| ||||| Sbjct: 120 agggaatgcctcccgctgatcatcttcctgcggaacaggctgaa 163
>ref|NM_205108.1| Gallus gallus ribosomal protein S4 (LOC396001), mRNA Length = 852 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaa 264 ||||||||||| || |||||| || ||||| ||||||| ||||| Sbjct: 119 agggaatgcctcccgctgatcatcttcctgcggaacaggctgaa 162
>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0040M10 Length = 162790 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaagaggagaagcacggcga 86 |||||||||||||||||||| Sbjct: 72949 gaagaggagaagcacggcga 72930
>emb|BX510368.7| Zebrafish DNA sequence from clone DKEY-190P19 in linkage group 20, complete sequence Length = 84687 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tcatggacattatttctatt 382 |||||||||||||||||||| Sbjct: 29 tcatggacattatttctatt 10
>dbj|AP005899.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-143J12, complete sequence Length = 155671 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 acctaccctgctggtttcatggac 370 |||||||||||||| ||||||||| Sbjct: 54386 acctaccctgctggattcatggac 54409
>emb|CR388097.9| Zebrafish DNA sequence from clone CH211-10J9 in linkage group 3, complete sequence Length = 195927 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 tttcatggacattatttcta 380 |||||||||||||||||||| Sbjct: 193565 tttcatggacattatttcta 193584
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 36 agaggagaaggagcaggcggcgggggtg 63 |||||||||||||| |||||||| |||| Sbjct: 7214422 agaggagaaggagccggcggcggcggtg 7214395
>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121243 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 36 agaggagaaggagcaggcggcgggggtg 63 |||||||||||||| |||||||| |||| Sbjct: 41568 agaggagaaggagccggcggcggcggtg 41595
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 36 agaggagaaggagcaggcggcgggggtg 63 |||||||||||||| |||||||| |||| Sbjct: 70856 agaggagaaggagccggcggcggcggtg 70829
>gb|U97374.1|SPU97374 Schizosaccharomyces pombe ribosomal protein S4 homolog mRNA, partial cds Length = 250 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 294 ctatccttatgcagcgtcatattatggttgatggaaaggt 333 ||||||||||||| |||| |||| ||| ||||||||||| Sbjct: 193 ctatccttatgcaacgtctcattaaggtagatggaaaggt 232
>gb|L24368.1|CHKRPS4A Gallus gallus (clone pDP1435) domesticus ribosomal protein S4 mRNA, complete cds Length = 852 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 221 agggaatgcctgcctctgatcctcatcctgaggaacagactgaa 264 ||||||||||| || |||||| || ||||| ||||||| ||||| Sbjct: 119 agggaatgcctcccgctgatcatcttcctgcggaacaggctgaa 162
>gb|AC131574.4| Homo sapiens chromosome 11, clone RP11-957H15, complete sequence Length = 166214 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 atggacattatttctattcc 384 |||||||||||||||||||| Sbjct: 8813 atggacattatttctattcc 8832
>emb|AL831753.5| Mouse DNA sequence from clone RP23-384M14 on chromosome 2, complete sequence Length = 180573 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 cactctgtcagggatgagga 459 |||||||||||||||||||| Sbjct: 169062 cactctgtcagggatgagga 169043 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,590,963 Number of Sequences: 3902068 Number of extensions: 4590963 Number of successful extensions: 81920 Number of sequences better than 10.0: 223 Number of HSP's better than 10.0 without gapping: 223 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81133 Number of HSP's gapped (non-prelim): 694 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
