>SWC4_ASPFU (Q4WNY4) SWR1-complex protein 4|
          Length = 588

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = -3

Query: 355 RLTSAAASPVDAEKATSLS*SRWCSLILSPTPRASSARKALVHVLNAYPDARSVADDSST 176
           +LT A ++    + AT+L+       +L PT R     + L+H +N   DAR V++   +
Sbjct: 430 KLTQAKSNVQSQKLATALAELEIPPRLLMPTERVCKEFEKLIHSVNLLLDARKVSEKIES 489

Query: 175 TLR 167
            +R
Sbjct: 490 EIR 492

>UVRC_CHLCH (Q3AQX4) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 629

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 20/56 (35%), Positives = 28/56 (50%)
 Frame = +3

Query: 252 DALGVGDKIREHHLLYERLVAFSASTGEAAAEVSLKMQGKSGPHEIRCVKRNFLLE 419
           DA GV  KIRE  LL  + +  + + GE+ A + L+M  K     I  V    LL+
Sbjct: 279 DACGVIFKIREGKLLGSQRIYINNTNGESEASMQLRMLEKFYVESIEPVPDEILLQ 334

>MURG_XANC5 (Q3BXF2) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 431

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +2

Query: 269 GQDQGAPPALREAGGLLCIHRRGCRGSEPKDAGQKRSSRNSLREAQLPA 415
           G   G PPA++E  GL      G R  +    G  ++S N  R AQL A
Sbjct: 371 GSGDGQPPAVQERAGL------GIRNKQTHKQGSMQTSVNGDRSAQLIA 413

>CD2A2_HUMAN (Q8N726) Cyclin-dependent kinase inhibitor 2A, isoform 4 (p14ARF)|
           (p19ARF)
          Length = 173

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +2

Query: 233 QRLPRARCPRRWGQDQGAPPALREAGGLLCIHRRGCRGSEPKDAGQKRSSR 385
           QRL +   PRR G D G  P    +GG     RRG +   P+ +   R+ R
Sbjct: 94  QRLGQQPLPRRPGHDDGQRP----SGGAAAAPRRGAQLRRPRHSHPTRARR 140

>RDRP_NODAV (Q9IMM4) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA|
            replicase) (Protein A)
          Length = 1043

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +2

Query: 257  PRRWGQDQGAPPALREAGGLLCIHRRGCRGSEPKDAGQKRSSRNSLREAQLPAG 418
            P R G+ +  PPA   AGG     R G +   P     KR +    R ++ PAG
Sbjct: 988  PGRGGRRRPGPPAKTTAGGA----RDGNQARAPTSGPSKRQAEGRSRSSRGPAG 1037

>SYI_AGRT5 (Q8UHJ6) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 967

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = +3

Query: 219 FNTWTNAFRALDALGVGDKI----REHHLLYERLVAFSASTGEAAAEVSLKMQGKSGPHE 386
           F+ WTN+ R L+A G+  KI     +     E    F  S    AA V +   GK G   
Sbjct: 356 FDAWTNSVRTLEARGIDTKIPFPVDDAGFYTEDAPGFGPSAEGGAARV-MDDNGKKGDAN 414

Query: 387 IRCVK 401
            R +K
Sbjct: 415 ERVIK 419


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,807,653
Number of Sequences: 219361
Number of extensions: 795406
Number of successful extensions: 2422
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2422
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)