ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart52b01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450643.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1731 Score = 192 bits (97), Expect = 7e-46 Identities = 169/193 (87%) Strand = Plus / Plus Query: 240 actgggacatcagctaccagttcacgcactcggactgcgtgcgcaagctggccgtgacca 299 |||||||||||||||||||||||||| | |||||||| |||||||||||||| |||| Sbjct: 86 actgggacatcagctaccagttcacgtcgcccgactgcgtacgcaagctggccgtcacca 145 Query: 300 tcaacgggggcaccccgggccccaccatccgcgccgtccagggcgacaccgtggtggtga 359 ||||||| ||| ||||||||||||||||||||||||||||| |||||| | || || | Sbjct: 146 tcaacggccacacgccgggccccaccatccgcgccgtccagggggacaccatcgtcgtca 205 Query: 360 ccgtcaagaacctcctgatgacggagaacgtggccatccactggcacggcatccggcagc 419 |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 206 acgtcaagaactcgctgctgacggagaacgtcgccatccactggcacggcatccggcaga 265 Query: 420 tgggcacgccgtg 432 | ||||||||||| Sbjct: 266 tcggcacgccgtg 278
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 192 bits (97), Expect = 7e-46 Identities = 169/193 (87%) Strand = Plus / Minus Query: 240 actgggacatcagctaccagttcacgcactcggactgcgtgcgcaagctggccgtgacca 299 |||||||||||||||||||||||||| | |||||||| |||||||||||||| |||| Sbjct: 11981222 actgggacatcagctaccagttcacgtcgcccgactgcgtacgcaagctggccgtcacca 11981163 Query: 300 tcaacgggggcaccccgggccccaccatccgcgccgtccagggcgacaccgtggtggtga 359 ||||||| ||| ||||||||||||||||||||||||||||| |||||| | || || | Sbjct: 11981162 tcaacggccacacgccgggccccaccatccgcgccgtccagggggacaccatcgtcgtca 11981103 Query: 360 ccgtcaagaacctcctgatgacggagaacgtggccatccactggcacggcatccggcagc 419 |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 11981102 acgtcaagaactcgctgctgacggagaacgtcgccatccactggcacggcatccggcaga 11981043 Query: 420 tgggcacgccgtg 432 | ||||||||||| Sbjct: 11981042 tcggcacgccgtg 11981030 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 284 aagctggccgtgaccatcaacgggggcaccccgggccccaccatccgcgccgtccagggc 343 ||||| ||||||||||||||||| | |||| || || ||||||||||||| ||||||| Sbjct: 19368069 aagctcgccgtgaccatcaacggcgagtcccccgggccgaccatccgcgccgcccagggc 19368128 Query: 344 gacaccgtggtggtgaccgtcaagaacctcctgatgacggagaacgtggccatccactgg 403 |||||| | || || |||||| | ||| | || || |||||| |||||||||||| Sbjct: 19368129 gacaccctcgtcgtcaccgtccacaacatgctcgacaccgagaacaccgccatccactgg 19368188 Query: 404 cacggcatccg 414 ||||||||||| Sbjct: 19368189 cacggcatccg 19368199
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 192 bits (97), Expect = 7e-46 Identities = 169/193 (87%) Strand = Plus / Minus Query: 240 actgggacatcagctaccagttcacgcactcggactgcgtgcgcaagctggccgtgacca 299 |||||||||||||||||||||||||| | |||||||| |||||||||||||| |||| Sbjct: 85702 actgggacatcagctaccagttcacgtcgcccgactgcgtacgcaagctggccgtcacca 85643 Query: 300 tcaacgggggcaccccgggccccaccatccgcgccgtccagggcgacaccgtggtggtga 359 ||||||| ||| ||||||||||||||||||||||||||||| |||||| | || || | Sbjct: 85642 tcaacggccacacgccgggccccaccatccgcgccgtccagggggacaccatcgtcgtca 85583 Query: 360 ccgtcaagaacctcctgatgacggagaacgtggccatccactggcacggcatccggcagc 419 |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 85582 acgtcaagaactcgctgctgacggagaacgtcgccatccactggcacggcatccggcaga 85523 Query: 420 tgggcacgccgtg 432 | ||||||||||| Sbjct: 85522 tcggcacgccgtg 85510
>ref|NM_187932.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1008 Score = 131 bits (66), Expect = 2e-27 Identities = 160/190 (84%), Gaps = 1/190 (0%) Strand = Plus / Plus Query: 240 actgggacatcagctaccagttcacgcactcggactgcgtgcgcaagctggccgtgacca 299 |||||||||||||||||||||||||| || ||||| ||| |||||||||||||| |||| Sbjct: 96 actgggacatcagctaccagttcacgtcct-ggactacgtccgcaagctggccgtcacca 154 Query: 300 tcaacgggggcaccccgggccccaccatccgcgccgtccagggcgacaccgtggtggtga 359 ||||||| ||| |||||||||||||| |||||||||||| |||||| | || || | Sbjct: 155 tcaacggccacacgttgggccccaccatccacgccgtccagggggacaccatcgtcgtca 214 Query: 360 ccgtcaagaacctcctgatgacggagaacgtggccatccactggcacggcatccggcagc 419 |||||||||| || |||||||||||| |||||||||||||| | |||||||||| Sbjct: 215 acgtcaagaactcgttgccgacggagaacgtcgccatccactggcaagacatccggcaga 274 Query: 420 tgggcacgcc 429 | |||||||| Sbjct: 275 tcggcacgcc 284
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 131 bits (66), Expect = 2e-27 Identities = 160/190 (84%), Gaps = 1/190 (0%) Strand = Plus / Minus Query: 240 actgggacatcagctaccagttcacgcactcggactgcgtgcgcaagctggccgtgacca 299 |||||||||||||||||||||||||| || ||||| ||| |||||||||||||| |||| Sbjct: 8639526 actgggacatcagctaccagttcacgtcct-ggactacgtccgcaagctggccgtcacca 8639468 Query: 300 tcaacgggggcaccccgggccccaccatccgcgccgtccagggcgacaccgtggtggtga 359 ||||||| ||| |||||||||||||| |||||||||||| |||||| | || || | Sbjct: 8639467 tcaacggccacacgttgggccccaccatccacgccgtccagggggacaccatcgtcgtca 8639408 Query: 360 ccgtcaagaacctcctgatgacggagaacgtggccatccactggcacggcatccggcagc 419 |||||||||| || |||||||||||| |||||||||||||| | |||||||||| Sbjct: 8639407 acgtcaagaactcgttgccgacggagaacgtcgccatccactggcaagacatccggcaga 8639348 Query: 420 tgggcacgcc 429 | |||||||| Sbjct: 8639347 tcggcacgcc 8639338 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ggcacggcatccggcagctg 421 |||||||||||||||||||| Sbjct: 36172780 ggcacggcatccggcagctg 36172761
>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0462H08 Length = 139152 Score = 131 bits (66), Expect = 2e-27 Identities = 160/190 (84%), Gaps = 1/190 (0%) Strand = Plus / Minus Query: 240 actgggacatcagctaccagttcacgcactcggactgcgtgcgcaagctggccgtgacca 299 |||||||||||||||||||||||||| || ||||| ||| |||||||||||||| |||| Sbjct: 71721 actgggacatcagctaccagttcacgtcct-ggactacgtccgcaagctggccgtcacca 71663 Query: 300 tcaacgggggcaccccgggccccaccatccgcgccgtccagggcgacaccgtggtggtga 359 ||||||| ||| |||||||||||||| |||||||||||| |||||| | || || | Sbjct: 71662 tcaacggccacacgttgggccccaccatccacgccgtccagggggacaccatcgtcgtca 71603 Query: 360 ccgtcaagaacctcctgatgacggagaacgtggccatccactggcacggcatccggcagc 419 |||||||||| || |||||||||||| |||||||||||||| | |||||||||| Sbjct: 71602 acgtcaagaactcgttgccgacggagaacgtcgccatccactggcaagacatccggcaga 71543 Query: 420 tgggcacgcc 429 | |||||||| Sbjct: 71542 tcggcacgcc 71533
>gb|AC133931.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013M05 map C3, complete sequence Length = 131117 Score = 97.6 bits (49), Expect = 3e-17 Identities = 157/193 (81%) Strand = Plus / Minus Query: 240 actgggacatcagctaccagttcacgcactcggactgcgtgcgcaagctggccgtgacca 299 |||||||||||| ||||||||||||| | ||||| |||| |||||||||||||| |||| Sbjct: 36170 actgggacatcacctaccagttcacgtccccggacagcgtccgcaagctggccgtcacca 36111 Query: 300 tcaacgggggcaccccgggccccaccatccgcgccgtccagggcgacaccgtggtggtga 359 ||||||| ||| ||| ||| ||||||| ||| |||| |||| ||||| | || | | Sbjct: 36110 tcaacggccacacgccgagccgcaccatcagcgtcgtctagggggacactatcgtcatca 36051 Query: 360 ccgtcaagaacctcctgatgacggagaacgtggccatccactggcacggcatccggcagc 419 |||||||||| ||| | ||||||||| | |||||||||||||| ||||||||||| Sbjct: 36050 acgtcaagaactcgctgctaacggagaacatcaccatccactggcacagcatccggcaga 35991 Query: 420 tgggcacgccgtg 432 | |||||||||| Sbjct: 35990 tcagcacgccgtg 35978
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 97.6 bits (49), Expect = 3e-17 Identities = 157/193 (81%) Strand = Plus / Minus Query: 240 actgggacatcagctaccagttcacgcactcggactgcgtgcgcaagctggccgtgacca 299 |||||||||||| ||||||||||||| | ||||| |||| |||||||||||||| |||| Sbjct: 13451611 actgggacatcacctaccagttcacgtccccggacagcgtccgcaagctggccgtcacca 13451552 Query: 300 tcaacgggggcaccccgggccccaccatccgcgccgtccagggcgacaccgtggtggtga 359 ||||||| ||| ||| ||| ||||||| ||| |||| |||| ||||| | || | | Sbjct: 13451551 tcaacggccacacgccgagccgcaccatcagcgtcgtctagggggacactatcgtcatca 13451492 Query: 360 ccgtcaagaacctcctgatgacggagaacgtggccatccactggcacggcatccggcagc 419 |||||||||| ||| | ||||||||| | |||||||||||||| ||||||||||| Sbjct: 13451491 acgtcaagaactcgctgctaacggagaacatcaccatccactggcacagcatccggcaga 13451432 Query: 420 tgggcacgccgtg 432 | |||||||||| Sbjct: 13451431 tcagcacgccgtg 13451419
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 97.6 bits (49), Expect = 3e-17 Identities = 157/193 (81%) Strand = Plus / Minus Query: 240 actgggacatcagctaccagttcacgcactcggactgcgtgcgcaagctggccgtgacca 299 |||||||||||| ||||||||||||| | ||||| |||| |||||||||||||| |||| Sbjct: 13531790 actgggacatcacctaccagttcacgtccccggacagcgtccgcaagctggccgtcacca 13531731 Query: 300 tcaacgggggcaccccgggccccaccatccgcgccgtccagggcgacaccgtggtggtga 359 ||||||| ||| ||| ||| ||||||| ||| |||| |||| ||||| | || | | Sbjct: 13531730 tcaacggccacacgccgagccgcaccatcagcgtcgtctagggggacactatcgtcatca 13531671 Query: 360 ccgtcaagaacctcctgatgacggagaacgtggccatccactggcacggcatccggcagc 419 |||||||||| ||| | ||||||||| | |||||||||||||| ||||||||||| Sbjct: 13531670 acgtcaagaactcgctgctaacggagaacatcaccatccactggcacagcatccggcaga 13531611 Query: 420 tgggcacgccgtg 432 | |||||||||| Sbjct: 13531610 tcagcacgccgtg 13531598
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 93.7 bits (47), Expect = 4e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 240 actgggacatcagctaccagttcacgcactcggactgcgtgcgcaagctggccgtgacca 299 |||||||||||| ||||||||||||| | |||||||||| |||||||||||||| |||| Sbjct: 11430915 actgggacatcacctaccagttcacgtccccggactgcgtccgcaagctggccgtcacca 11430974 Query: 300 tcaacgggggcaccccgggccccaccatccgcgccgtccagggcgacaccgtggtggtga 359 ||||||| ||| ||| ||| ||||||| ||| |||| || | |||| | || | | Sbjct: 11430975 tcaacggccacacgccgagccgcaccatcagcgtcgtctagagggacagtatcgtcatca 11431034 Query: 360 ccgtcaagaacctcctgatgacggagaacgtggccatccactggcacggcatccggcag 418 | |||||||| ||| |||||||||| || ||||||||||||||| ||||||||||| Sbjct: 11431035 acatcaagaactcgctgctgacggagaaagtcgccatccactggcacagcatccggcag 11431093
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 93.7 bits (47), Expect = 4e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 240 actgggacatcagctaccagttcacgcactcggactgcgtgcgcaagctggccgtgacca 299 |||||||||||| ||||||||||||| | |||||||||| |||||||||||||| |||| Sbjct: 11430586 actgggacatcacctaccagttcacgtccccggactgcgtccgcaagctggccgtcacca 11430645 Query: 300 tcaacgggggcaccccgggccccaccatccgcgccgtccagggcgacaccgtggtggtga 359 ||||||| ||| ||| ||| ||||||| ||| |||| || | |||| | || | | Sbjct: 11430646 tcaacggccacacgccgagccgcaccatcagcgtcgtctagagggacagtatcgtcatca 11430705 Query: 360 ccgtcaagaacctcctgatgacggagaacgtggccatccactggcacggcatccggcag 418 | |||||||| ||| |||||||||| || ||||||||||||||| ||||||||||| Sbjct: 11430706 acatcaagaactcgctgctgacggagaaagtcgccatccactggcacagcatccggcag 11430764
>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167806 Score = 93.7 bits (47), Expect = 4e-16 Identities = 146/179 (81%) Strand = Plus / Minus Query: 240 actgggacatcagctaccagttcacgcactcggactgcgtgcgcaagctggccgtgacca 299 |||||||||||| ||||||||||||| | |||||||||| |||||||||||||| |||| Sbjct: 106049 actgggacatcacctaccagttcacgtccccggactgcgtccgcaagctggccgtcacca 105990 Query: 300 tcaacgggggcaccccgggccccaccatccgcgccgtccagggcgacaccgtggtggtga 359 ||||||| ||| ||| ||| ||||||| ||| |||| || | |||| | || | | Sbjct: 105989 tcaacggccacacgccgagccgcaccatcagcgtcgtctagagggacagtatcgtcatca 105930 Query: 360 ccgtcaagaacctcctgatgacggagaacgtggccatccactggcacggcatccggcag 418 | |||||||| ||| |||||||||| || ||||||||||||||| ||||||||||| Sbjct: 105929 acatcaagaactcgctgctgacggagaaagtcgccatccactggcacagcatccggcag 105871
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 284 aagctggccgtgaccatcaacgggggcaccccgggccccaccatccgcgccgtccagggc 343 ||||| ||||||||||||||||| | |||| || || ||||||||||||| ||||||| Sbjct: 87295 aagctcgccgtgaccatcaacggcgagtcccccgggccgaccatccgcgccgcccagggc 87354 Query: 344 gacaccgtggtggtgaccgtcaagaacctcctgatgacggagaacgtggccatccactgg 403 |||||| | || || |||||| | ||| | || || |||||| |||||||||||| Sbjct: 87355 gacaccctcgtcgtcaccgtccacaacatgctcgacaccgagaacaccgccatccactgg 87414 Query: 404 cacggcatccg 414 ||||||||||| Sbjct: 87415 cacggcatccg 87425
>dbj|AK110881.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-G09, full insert sequence Length = 2047 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 284 aagctggccgtgaccatcaacgggggcaccccgggccccaccatccgcgccgtccagggc 343 ||||| ||||||||||||||||| | |||| || || ||||||||||||| ||||||| Sbjct: 257 aagctcgccgtgaccatcaacggcgagtcccccgggccgaccatccgcgccgcccagggc 316 Query: 344 gacaccgtggtggtgaccgtcaagaacctcctgatgacggagaacgtggccatccactgg 403 |||||| | || || |||||| | ||| | || || |||||| |||||||||||| Sbjct: 317 gacaccctcgtcgtcaccgtccacaacatgctcgacaccgagaacaccgccatccactgg 376 Query: 404 cacggcatccg 414 ||||||||||| Sbjct: 377 cacggcatccg 387
>ref|NM_190556.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1734 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 394 catccactggcacggcatccggcagctg 421 |||||||||||||||||||||||||||| Sbjct: 249 catccactggcacggcatccggcagctg 276
>dbj|AK066513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068J22, full insert sequence Length = 2212 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 394 catccactggcacggcatccggcagctg 421 |||||||||||||||||||||||||||| Sbjct: 330 catccactggcacggcatccggcagctg 357
>emb|AM086216.1| Zea mays mRNA for putative laccase (lac4 gene) Length = 2192 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 398 cactggcacggcatccggcagctgggcacg 427 |||||||||||||||||||||||| ||||| Sbjct: 427 cactggcacggcatccggcagctgcgcacg 456
>dbj|AK068047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B16, full insert sequence Length = 2161 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 394 catccactggcacggcatccggcagctg 421 ||||||||||||||| |||||||||||| Sbjct: 315 catccactggcacgggatccggcagctg 342
>gb|AC149430.1| Populus trichocarpa clone Pop1-116F13, complete sequence Length = 114875 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Minus Query: 392 gccatccactggcacggcatccggcag 418 ||||||||||||||||| ||||||||| Sbjct: 25315 gccatccactggcacggaatccggcag 25289
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 337 ccagggcgacaccgtggtggtgaccgtcaag 367 ||||||||||||||| ||||||| ||||||| Sbjct: 1510073 ccagggcgacaccgttgtggtgaacgtcaag 1510103
>gb|AF548614.1| Lolium perenne laccase LAC11 mRNA, partial cds Length = 703 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 398 cactggcacggcatccggcagct 420 ||||||||||||||||||||||| Sbjct: 329 cactggcacggcatccggcagct 351
>gb|AE011760.1| Xanthomonas axonopodis pv. citri str. 306, section 138 of 469 of the complete genome Length = 11677 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 337 ccagggcgacaccgtggtggtgaccgtcaag 367 ||||||||||||||| ||||||| ||||||| Sbjct: 177 ccagggcgacaccgttgtggtgaacgtcaag 207
>gb|AE012219.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 127 of 460 of the complete genome Length = 11476 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 337 ccagggcgacaccgtggtggtgaccgtcaag 367 ||||||||||||||| ||||||| ||||||| Sbjct: 4850 ccagggcgacaccgtcgtggtgaacgtcaag 4880
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Minus Query: 337 ccagggcgacaccgtggtggtgaccgtcaag 367 ||||||||||||||| ||||||| ||||||| Sbjct: 3641163 ccagggcgacaccgtcgtggtgaacgtcaag 3641133
>dbj|AK105605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A11, full insert sequence Length = 2191 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 394 catccactggcacggcatccggcagctgggcacgccgtg 432 ||||||||||||||||||| | ||| | ||||||||||| Sbjct: 346 catccactggcacggcatcagacagtttggcacgccgtg 384
>gb|AC137120.22| Mus musculus chromosome 15, clone RP23-255G14, complete sequence Length = 203811 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 ggtggtggtggagcaatggagt 146 |||||||||||||||||||||| Sbjct: 42118 ggtggtggtggagcaatggagt 42139
>ref|NM_190416.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1704 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 393 ccatccactggcacggcatccggcag 418 ||||||| |||||||||||||||||| Sbjct: 239 ccatccattggcacggcatccggcag 264
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 393 ccatccactggcacggcatccg 414 |||||||||||||||||||||| Sbjct: 5679811 ccatccactggcacggcatccg 5679790
>gb|AE004795.1| Pseudomonas aeruginosa PAO1, section 356 of 529 of the complete genome Length = 10978 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 393 ccatccactggcacggcatccg 414 |||||||||||||||||||||| Sbjct: 10594 ccatccactggcacggcatccg 10573
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 cggcgctcgccgccgtcgcgca 219 |||||||||||||||||||||| Sbjct: 4221322 cggcgctcgccgccgtcgcgca 4221301 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gccgccgtcgcgcaggccaa 225 |||||||||||||||||||| Sbjct: 2216602 gccgccgtcgcgcaggccaa 2216621
>dbj|AK071929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072C02, full insert sequence Length = 2023 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 393 ccatccactggcacggcatccggcag 418 ||||||| |||||||||||||||||| Sbjct: 351 ccatccattggcacggcatccggcag 376
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 cggcgctcgccgccgtcgcgcaggcc 223 |||||| ||||||||||||||||||| Sbjct: 183890 cggcgcgcgccgccgtcgcgcaggcc 183915 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 gccgccgtcgcgcaggccaagacg 229 |||||| ||||||||||||||||| Sbjct: 2962141 gccgccatcgcgcaggccaagacg 2962118
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 393 ccatccactggcacggcatccg 414 |||||||||||||||||||||| Sbjct: 1181253 ccatccactggcacggcatccg 1181274 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 ccatccactggcacggcatc 412 |||||||||||||||||||| Sbjct: 6133550 ccatccactggcacggcatc 6133531
>emb|AM086217.1| Zea mays mRNA for putative laccase (lac5 gene) Length = 2044 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 396 tccactggcacggcatccggcagctg 421 |||||||||||||| ||||||||||| Sbjct: 337 tccactggcacggcgtccggcagctg 362
>emb|AM086214.1| Zea mays mRNA for putative laccase (lac2 gene) Length = 2188 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 396 tccactggcacggcatccggcagctg 421 |||||||||||||| ||||||||||| Sbjct: 371 tccactggcacggcgtccggcagctg 396
>ref|NM_102805.2| Arabidopsis thaliana transporter AT1G30690 transcript variant AT1G30690.1 mRNA, complete cds Length = 1984 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 accttctcctctgctgcctcttcct 189 ||||||||||||||||| ||||||| Sbjct: 505 accttctcctctgctgcttcttcct 481
>ref|NM_001036042.1| Arabidopsis thaliana transporter AT1G30690 transcript variant AT1G30690.2 mRNA, complete cds Length = 2034 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 accttctcctctgctgcctcttcct 189 ||||||||||||||||| ||||||| Sbjct: 538 accttctcctctgctgcttcttcct 514
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 198 cggcgctcgccgccgtcgcgcaggc 222 ||||||||||||||| ||||||||| Sbjct: 2034642 cggcgctcgccgccggcgcgcaggc 2034618
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 gctggccgtgaccatcaacgg 306 ||||||||||||||||||||| Sbjct: 381401 gctggccgtgaccatcaacgg 381421
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 cggcgctcgccgccgtcgcgcaggc 222 ||||||||||||||| ||||||||| Sbjct: 1398549 cggcgctcgccgccggcgcgcaggc 1398573
>gb|AC159994.7| Mus musculus chromosome 7, clone RP23-368F23, complete sequence Length = 181238 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 ccttctcctctgctgcctcttcctc 190 ||||||||||| ||||||||||||| Sbjct: 126173 ccttctcctcttctgcctcttcctc 126149
>gb|BT000959.1| Arabidopsis thaliana clone C104710 unknown protein (At1g30690) mRNA, complete cds Length = 1654 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 accttctcctctgctgcctcttcct 189 ||||||||||||||||| ||||||| Sbjct: 374 accttctcctctgctgcttcttcct 350
>gb|AC098733.2| Mus musculus BAC clone RP23-103C10 from 19, complete sequence Length = 214382 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 ctcctctgctgcctcttcctc 190 ||||||||||||||||||||| Sbjct: 124809 ctcctctgctgcctcttcctc 124789
>gb|AY035162.1| Arabidopsis thaliana unknown protein (At1g30690) mRNA, complete cds Length = 1911 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 accttctcctctgctgcctcttcct 189 ||||||||||||||||| ||||||| Sbjct: 507 accttctcctctgctgcttcttcct 483
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 tgcccttgcccattccgacgc 46 ||||||||||||||||||||| Sbjct: 2269097 tgcccttgcccattccgacgc 2269077 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ctcggcgctcgccgccgtcg 215 |||||||||||||||||||| Sbjct: 1702493 ctcggcgctcgccgccgtcg 1702512
>emb|AJ005019.1|SEAJ5019 Sagitta elegans mRNA for intermediate filament protein IF2 Length = 2089 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 ttccatgagcggtggtggtgg 135 ||||||||||||||||||||| Sbjct: 1813 ttccatgagcggtggtggtgg 1833
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 cggcgctcgccgccgtcgcgcaggc 222 ||||||||||||||| ||||||||| Sbjct: 1270473 cggcgctcgccgccggcgcgcaggc 1270497
>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence Length = 96183 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 accttctcctctgctgcctcttcct 189 ||||||||||||||||| ||||||| Sbjct: 63908 accttctcctctgctgcttcttcct 63884
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 gcctcggcgctcgccgccgtc 214 ||||||||||||||||||||| Sbjct: 8759609 gcctcggcgctcgccgccgtc 8759629 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tcgccgccgtcgcgcaggcc 223 |||||||||||||||||||| Sbjct: 7255175 tcgccgccgtcgcgcaggcc 7255156
>gb|AF440828.1| Streptomyces avermitilis Imp1 (imp1) gene, partial cds; Imp2 (imp2) gene, complete cds; and unknown genes Length = 7996 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 gcctcggcgctcgccgccgtc 214 ||||||||||||||||||||| Sbjct: 7300 gcctcggcgctcgccgccgtc 7320
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 cggcgctcgccgccgtcgcgcaggc 222 ||||||||||||||| ||||||||| Sbjct: 1093197 cggcgctcgccgccggcgcgcaggc 1093221
>gb|AY123253.3| Klebsiella pneumoniae plasmid pRMH760, partial sequence Length = 45325 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 4856 agggcgacaccgtggtggtg 4837
>gb|AY378100.1| Klebsiella pneumoniae plasmid pLVPK, complete sequence Length = 219385 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 152013 agggcgacaccgtggtggtg 151994
>gb|U12338.2|PAU12338 Pseudomonas aeruginosa plasmid R1033 transposon Tn1696, partial sequence Length = 13587 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 3406 agggcgacaccgtggtggtg 3387
>gb|DQ437742.1| Pseudomonas aeruginosa strain 6077 ExoU Island A, complete sequence Length = 81751 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 34614 agggcgacaccgtggtggtg 34595
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 tccgcgccgtccagggcgac 346 |||||||||||||||||||| Sbjct: 396929 tccgcgccgtccagggcgac 396948
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 tggtggtggagcaatggagt 146 |||||||||||||||||||| Sbjct: 11416531 tggtggtggagcaatggagt 11416512
>emb|Y09025.1|ECMERTREL Enterobacter cloacae DNA, mosaic mercury resistance transposable element (mer-operon) Length = 8012 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 4607 agggcgacaccgtggtggtg 4626
>emb|AJ746361.2| Salmonella typhimurium virulence plasmid t-ST4, In-t7 and In-t8 integrons Length = 16409 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 11514 agggcgacaccgtggtggtg 11495
>gb|AC127413.3| Mus musculus BAC clone RP23-236A4 from 15, complete sequence Length = 194448 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttccatgagcggtggtggtg 134 |||||||||||||||||||| Sbjct: 115856 ttccatgagcggtggtggtg 115875
>emb|Y10102.1|ECTREMER2 Escherichia coli partial merA gene, merD gene and 3 ORF's Length = 3624 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 2285 agggcgacaccgtggtggtg 2304
>emb|Y08993.1|ASMMRTRAN Alcaligenes sp. pMER610 incomplete unit of mosaic mercury resistance transposon Length = 5629 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 5052 agggcgacaccgtggtggtg 5071
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 tccgcgccgtccagggcgac 346 |||||||||||||||||||| Sbjct: 1716403 tccgcgccgtccagggcgac 1716422
>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08, complete sequence Length = 130521 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tggtggtggagcaatggagt 146 |||||||||||||||||||| Sbjct: 90612 tggtggtggagcaatggagt 90631
>emb|AL513383.1|STYPPHCM1 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1 Length = 218160 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 122525 agggcgacaccgtggtggtg 122544
>emb|AJ567348.1|SFR567348 Sinorhizobium fredii partial cobN gene, cobO gene, smc01259 gene, smc04286 gene, cobE gene, cobA gene and partial cobB gene Length = 4662 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tcgccgccgtcgcgcaggcc 223 |||||||||||||||||||| Sbjct: 3527 tcgccgccgtcgcgcaggcc 3508
>gb|AE005748.1| Caulobacter crescentus CB15 section 74 of 359 of the complete genome Length = 5664 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cggcgctcgccgccgtcgcg 217 |||||||||||||||||||| Sbjct: 3512 cggcgctcgccgccgtcgcg 3493
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 cggcatccggcagctgggca 425 |||||||||||||||||||| Sbjct: 3515295 cggcatccggcagctgggca 3515314
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cggcgctcgccgccgtcgcg 217 |||||||||||||||||||| Sbjct: 90856 cggcgctcgccgccgtcgcg 90837
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 2284616 agggcgacaccgtggtggtg 2284635
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 tccgcgccgtccagggcgac 346 |||||||||||||||||||| Sbjct: 1166533 tccgcgccgtccagggcgac 1166552
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tggtggtggagcaatggagt 146 |||||||||||||||||||| Sbjct: 15904047 tggtggtggagcaatggagt 15904066
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggtggtggtggagcaatgga 144 |||||||||||||||||||| Sbjct: 26110090 ggtggtggtggagcaatgga 26110071
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 tggtggtggagcaatggagt 146 |||||||||||||||||||| Sbjct: 11413294 tggtggtggagcaatggagt 11413275
>gb|AF322013.1|AF322012S2 Bradyrhizobium japonicum symbiotic gene region, part 2 of 2 Length = 230573 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gccgccgtcgcgcaggccaa 225 |||||||||||||||||||| Sbjct: 158117 gccgccgtcgcgcaggccaa 158136
>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15, complete sequence Length = 159270 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 tggtggtggagcaatggagt 146 |||||||||||||||||||| Sbjct: 124828 tggtggtggagcaatggagt 124809
>dbj|AP006726.1| Klebsiella pneumoniae NTUH-K2044 plasmid pK2044 DNA, complete genome Length = 224152 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 81686 agggcgacaccgtggtggtg 81667
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ggcgacaccgtggtggtgac 360 |||||||||||||||||||| Sbjct: 2820069 ggcgacaccgtggtggtgac 2820050
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 ctcggcgctcgccgccgtcgcgca 219 |||||||| ||||||||||||||| Sbjct: 261806 ctcggcgcccgccgccgtcgcgca 261783
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406G08 Length = 144233 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ggcacggcatccggcagctg 421 |||||||||||||||||||| Sbjct: 49793 ggcacggcatccggcagctg 49774
>dbj|AB088420.1| Pseudomonas resinovorans plasmid pCAR1, complete sequence Length = 199035 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 179959 agggcgacaccgtggtggtg 179940
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02 Length = 151636 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggtggtggtggagcaatgga 144 |||||||||||||||||||| Sbjct: 89335 ggtggtggtggagcaatgga 89316
>emb|X78059.1|YERGTN2 Y.enterocolitica resolvase gene of transposon TN3926 Length = 1292 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 884 agggcgacaccgtggtggtg 903
>dbj|AK106303.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-C07, full insert sequence Length = 2585 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggtggtggtggagcaatgga 144 |||||||||||||||||||| Sbjct: 260 ggtggtggtggagcaatgga 279
>dbj|AK063675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-D11, full insert sequence Length = 965 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggtggtggtggagcaatgga 144 |||||||||||||||||||| Sbjct: 18 ggtggtggtggagcaatgga 37
>gb|AF134211.1|AF134211 Mercury resistant bacterium '96 SE13 merD (merD) gene, partial cds; Urf1 (urf1), Urf2X (urf2X), and Urf2Y (urf2Y) genes, complete cds; and resolvase (tnpR) gene, partial cds Length = 1266 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 895 agggcgacaccgtggtggtg 914
>gb|AY509004.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 plasmid pSC138, complete sequence Length = 138742 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 22954 agggcgacaccgtggtggtg 22935
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gggcgacaccgtggtggtga 359 |||||||||||||||||||| Sbjct: 3898449 gggcgacaccgtggtggtga 3898468
>gb|U61278.1|KOU61278 Klebsiella oxytoca Class B tnpR resolvase (tnpR) gene, partial cds Length = 422 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 89 agggcgacaccgtggtggtg 108
>gb|U61277.1|ECU61277 Enterobacter cloacae Class A tnpR resolvase (tnpR) gene, partial cds Length = 402 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 agggcgacaccgtggtggtg 358 |||||||||||||||||||| Sbjct: 72 agggcgacaccgtggtggtg 91 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,926,452 Number of Sequences: 3902068 Number of extensions: 2926452 Number of successful extensions: 68901 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65611 Number of HSP's gapped (non-prelim): 3278 length of query: 432 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 410 effective length of database: 17,147,199,772 effective search space: 7030351906520 effective search space used: 7030351906520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
