ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart52a08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 295 bits (149), Expect = 5e-77 Identities = 247/280 (88%), Gaps = 6/280 (2%) Strand = Plus / Plus Query: 64 ggcgcacgcgatgatgttcccgttcccgtgctcgggccacatcaacccgacgctgaagct 123 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6216515 ggcgcacgcgatgctgttcccgttcccgtgctcggggcacatcaacccgacgctgaagct 6216574 Query: 124 ggcggagctgctgcactcgcgcggggtgcacgtcaccttcgtcaacacggagcacaacca 183 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6216575 ggccgagctgctgcactcgcgcggggtgcacgtcacgttcgtcaacacggagcacaacca 6216634 Query: 184 cgagcggctgctgcggacg------ggcggcgcgcggctccgcggccgcgacgggttccg 237 |||||| ||||||||| | ||||||| | ||| ||||| || || |||||||| Sbjct: 6216635 cgagcgcctgctgcggcggcgcggcggcggcggggcgctgcgcgggcgggaggggttccg 6216694 Query: 238 gttcgagtccgtacccgacgggctggacgacgccgaccgcgccgcccccgacaagacggt 297 ||||||| | || |||||||||||| ||||| ||| |||||||| || |||| ||||| Sbjct: 6216695 gttcgaggcggtgcccgacgggctgcgcgacgacgagcgcgccgcgccggacagcacggt 6216754 Query: 298 gaggctgtacctgtcgctgcgcaggagctgcggcccgccg 337 ||||||||||||||||||||| |||||||||||| ||||| Sbjct: 6216755 gaggctgtacctgtcgctgcggaggagctgcggcgcgccg 6216794 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 caggagctagagctagagctag 22 |||||||||||||||||||||| Sbjct: 23361032 caggagctagagctagagctag 23361011 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 caggagctagagctagagctag 22 |||||||||||||||||||||| Sbjct: 9023904 caggagctagagctagagctag 9023925
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 295 bits (149), Expect = 5e-77 Identities = 247/280 (88%), Gaps = 6/280 (2%) Strand = Plus / Plus Query: 64 ggcgcacgcgatgatgttcccgttcccgtgctcgggccacatcaacccgacgctgaagct 123 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130334 ggcgcacgcgatgctgttcccgttcccgtgctcggggcacatcaacccgacgctgaagct 130393 Query: 124 ggcggagctgctgcactcgcgcggggtgcacgtcaccttcgtcaacacggagcacaacca 183 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130394 ggccgagctgctgcactcgcgcggggtgcacgtcacgttcgtcaacacggagcacaacca 130453 Query: 184 cgagcggctgctgcggacg------ggcggcgcgcggctccgcggccgcgacgggttccg 237 |||||| ||||||||| | ||||||| | ||| ||||| || || |||||||| Sbjct: 130454 cgagcgcctgctgcggcggcgcggcggcggcggggcgctgcgcgggcgggaggggttccg 130513 Query: 238 gttcgagtccgtacccgacgggctggacgacgccgaccgcgccgcccccgacaagacggt 297 ||||||| | || |||||||||||| ||||| ||| |||||||| || |||| ||||| Sbjct: 130514 gttcgaggcggtgcccgacgggctgcgcgacgacgagcgcgccgcgccggacagcacggt 130573 Query: 298 gaggctgtacctgtcgctgcgcaggagctgcggcccgccg 337 ||||||||||||||||||||| |||||||||||| ||||| Sbjct: 130574 gaggctgtacctgtcgctgcggaggagctgcggcgcgccg 130613
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 295 bits (149), Expect = 5e-77 Identities = 247/280 (88%), Gaps = 6/280 (2%) Strand = Plus / Plus Query: 64 ggcgcacgcgatgatgttcccgttcccgtgctcgggccacatcaacccgacgctgaagct 123 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 10591 ggcgcacgcgatgctgttcccgttcccgtgctcggggcacatcaacccgacgctgaagct 10650 Query: 124 ggcggagctgctgcactcgcgcggggtgcacgtcaccttcgtcaacacggagcacaacca 183 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 10651 ggccgagctgctgcactcgcgcggggtgcacgtcacgttcgtcaacacggagcacaacca 10710 Query: 184 cgagcggctgctgcggacg------ggcggcgcgcggctccgcggccgcgacgggttccg 237 |||||| ||||||||| | ||||||| | ||| ||||| || || |||||||| Sbjct: 10711 cgagcgcctgctgcggcggcgcggcggcggcggggcgctgcgcgggcgggaggggttccg 10770 Query: 238 gttcgagtccgtacccgacgggctggacgacgccgaccgcgccgcccccgacaagacggt 297 ||||||| | || |||||||||||| ||||| ||| |||||||| || |||| ||||| Sbjct: 10771 gttcgaggcggtgcccgacgggctgcgcgacgacgagcgcgccgcgccggacagcacggt 10830 Query: 298 gaggctgtacctgtcgctgcgcaggagctgcggcccgccg 337 ||||||||||||||||||||| |||||||||||| ||||| Sbjct: 10831 gaggctgtacctgtcgctgcggaggagctgcggcgcgccg 10870
>dbj|AK063324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H05, full insert sequence Length = 1808 Score = 295 bits (149), Expect = 5e-77 Identities = 247/280 (88%), Gaps = 6/280 (2%) Strand = Plus / Plus Query: 64 ggcgcacgcgatgatgttcccgttcccgtgctcgggccacatcaacccgacgctgaagct 123 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 86 ggcgcacgcgatgctgttcccgttcccgtgctcggggcacatcaacccgacgctgaagct 145 Query: 124 ggcggagctgctgcactcgcgcggggtgcacgtcaccttcgtcaacacggagcacaacca 183 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 146 ggccgagctgctgcactcgcgcggggtgcacgtcacgttcgtcaacacggagcacaacca 205 Query: 184 cgagcggctgctgcgg------acgggcggcgcgcggctccgcggccgcgacgggttccg 237 |||||| ||||||||| | ||||||| | ||| ||||| || || |||||||| Sbjct: 206 cgagcgcctgctgcggcggcgcagcggcggcggggcgctgcgcgggcgggaggggttccg 265 Query: 238 gttcgagtccgtacccgacgggctggacgacgccgaccgcgccgcccccgacaagacggt 297 ||||||| | || |||||||||||| ||||| ||| |||||||| || |||| ||||| Sbjct: 266 gttcgaggcggtgcccgacgggctgcgcgacgacgagcgcgccgcgccggacagcacggt 325 Query: 298 gaggctgtacctgtcgctgcgcaggagctgcggcccgccg 337 ||||||||||||||||||||| |||||||||||| ||||| Sbjct: 326 gaggctgtacctgtcgctgcggaggagctgcggcgcgccg 365
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 192 bits (97), Expect = 5e-46 Identities = 142/157 (90%) Strand = Plus / Plus Query: 43 ggccatggcggaggagaagagggcgcacgcgatgatgttcccgttcccgtgctcgggcca 102 |||||||| |||| || ||| ||||||||||| ||||||||||||||||||| || || Sbjct: 13853918 ggccatgggagaggggaggagagcgcacgcgatactgttcccgttcccgtgctcagggca 13853977 Query: 103 catcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgtcacctt 162 ||||||||||||| |||||||||| |||||||||||||||||| |||||| |||||| || Sbjct: 13853978 catcaacccgacgttgaagctggccgagctgctgcactcgcgcagggtgcccgtcacgtt 13854037 Query: 163 cgtcaacacggagcacaaccacgagcggctgctgcgg 199 |||||||||||||||||||||||||||||||| |||| Sbjct: 13854038 cgtcaacacggagcacaaccacgagcggctgcggcgg 13854074 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 293 acggtgaggctgtacctgtcgctgcgcaggagctgcg 329 ||||||||||||||||||||| |||| |||||||||| Sbjct: 13854130 acggtgaggctgtacctgtcgttgcggaggagctgcg 13854166
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12 Length = 132736 Score = 192 bits (97), Expect = 5e-46 Identities = 142/157 (90%) Strand = Plus / Plus Query: 43 ggccatggcggaggagaagagggcgcacgcgatgatgttcccgttcccgtgctcgggcca 102 |||||||| |||| || ||| ||||||||||| ||||||||||||||||||| || || Sbjct: 103402 ggccatgggagaggggaggagagcgcacgcgatactgttcccgttcccgtgctcagggca 103461 Query: 103 catcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgtcacctt 162 ||||||||||||| |||||||||| |||||||||||||||||| |||||| |||||| || Sbjct: 103462 catcaacccgacgttgaagctggccgagctgctgcactcgcgcagggtgcccgtcacgtt 103521 Query: 163 cgtcaacacggagcacaaccacgagcggctgctgcgg 199 |||||||||||||||||||||||||||||||| |||| Sbjct: 103522 cgtcaacacggagcacaaccacgagcggctgcggcgg 103558 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 293 acggtgaggctgtacctgtcgctgcgcaggagctgcg 329 ||||||||||||||||||||| |||| |||||||||| Sbjct: 103614 acggtgaggctgtacctgtcgttgcggaggagctgcg 103650
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 192 bits (97), Expect = 5e-46 Identities = 142/157 (90%) Strand = Plus / Plus Query: 43 ggccatggcggaggagaagagggcgcacgcgatgatgttcccgttcccgtgctcgggcca 102 |||||||| |||| || ||| ||||||||||| ||||||||||||||||||| || || Sbjct: 7595 ggccatgggagaggggaggagagcgcacgcgatactgttcccgttcccgtgctcagggca 7654 Query: 103 catcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgtcacctt 162 ||||||||||||| |||||||||| |||||||||||||||||| |||||| |||||| || Sbjct: 7655 catcaacccgacgttgaagctggccgagctgctgcactcgcgcagggtgcccgtcacgtt 7714 Query: 163 cgtcaacacggagcacaaccacgagcggctgctgcgg 199 |||||||||||||||||||||||||||||||| |||| Sbjct: 7715 cgtcaacacggagcacaaccacgagcggctgcggcgg 7751 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 293 acggtgaggctgtacctgtcgctgcgcaggagctgcg 329 ||||||||||||||||||||| |||| |||||||||| Sbjct: 7807 acggtgaggctgtacctgtcgttgcggaggagctgcg 7843
>dbj|AK102386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092D13, full insert sequence Length = 1904 Score = 192 bits (97), Expect = 5e-46 Identities = 142/157 (90%) Strand = Plus / Minus Query: 43 ggccatggcggaggagaagagggcgcacgcgatgatgttcccgttcccgtgctcgggcca 102 |||||||| |||| || ||| ||||||||||| ||||||||||||||||||| || || Sbjct: 1219 ggccatgggagaggggaggagagcgcacgcgatactgttcccgttcccgtgctcagggca 1160 Query: 103 catcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgtcacctt 162 ||||||||||||| |||||||||| |||||||||||||||||| |||||| |||||| || Sbjct: 1159 catcaacccgacgttgaagctggccgagctgctgcactcgcgcagggtgcccgtcacgtt 1100 Query: 163 cgtcaacacggagcacaaccacgagcggctgctgcgg 199 |||||||||||||||||||||||||||||||| |||| Sbjct: 1099 cgtcaacacggagcacaaccacgagcggctgcggcgg 1063 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 293 acggtgaggctgtacctgtcgctgcgcaggagctgcg 329 ||||||||||||||||||||| |||| |||||||||| Sbjct: 1007 acggtgaggctgtacctgtcgttgcggaggagctgcg 971
>ref|XM_482293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1494 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| | |||||| ||| |||||||| | ||||| Sbjct: 84 gggccacgtcacgccgatgctgaagctggccgtgctgctccacgcgcgcgggttccacgt 143 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 144 caccttcgtcaaca 157
>ref|XM_471830.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1428 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| | |||||| ||| |||||||| | ||||| Sbjct: 84 gggccacgtcacgccgatgctgaagctggccgtgctgctccacgcgcgcgggttccacgt 143 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 144 caccttcgtcaaca 157
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| | |||||| ||| |||||||| | ||||| Sbjct: 14830408 gggccacgtcacgccgatgctgaagctggccgtgctgctccacgcgcgcgggttccacgt 14830467 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 14830468 caccttcgtcaaca 14830481 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| ||||||| ||| ||||||| | ||||| Sbjct: 15152242 gggccacgtcacgccgatgctgaagctggccaagctgctccacgcgcgcggcttccacgt 15152183 Query: 157 caccttcgtcaacacggagcacaaccac 184 ||||||||||||||| ||| ||||||| Sbjct: 15152182 caccttcgtcaacaccgagttcaaccac 15152155 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| ||||||| ||| ||||||| | ||||| Sbjct: 14735643 gggccacgtcacgccgatgctgaagctggccaagctgctccacgcgcgcggcttccacgt 14735702 Query: 157 caccttcgtcaacacggagcacaaccac 184 ||||||||||||||| ||| ||||||| Sbjct: 14735703 caccttcgtcaacaccgagttcaaccac 14735730 Score = 56.0 bits (28), Expect = 8e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||||||| |||| | |||||||||| ||||||| ||| |||| || | ||||| Sbjct: 15164856 gggccacatcacgccgatgatgaagctggccaagctgctccacgcgcgtggcttccacgt 15164797 Query: 157 caccttcgtcaacacggagcacaaccac 184 ||||||||||||||| ||| ||||||| Sbjct: 15164796 caccttcgtcaacaccgagttcaaccac 15164769 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Minus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| ||||| ||||||| ||||||| |||| ||||| | ||||| Sbjct: 14787148 gggccacgtcacgccgatgctgacgctggcgaagctgctatactcccgcggcttccacgt 14787089 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 14787088 caccttcgtcaaca 14787075 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||||| ||| ||||||| Sbjct: 15013017 cacgtcaccttcgtcaacaccgagttcaaccac 15013049 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||||| ||| ||||||| Sbjct: 14723193 cacgtcaccttcgtcaacaccgagttcaaccac 14723225
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| | |||||| ||| |||||||| | ||||| Sbjct: 19285663 gggccacgtcacgccgatgctgaagctggccgtgctgctccacgcgcgcgggttccacgt 19285722 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 19285723 caccttcgtcaaca 19285736 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 218 cgcggccgcgacgggttccggttcgag 244 ||||||||||||||||||||||||||| Sbjct: 4007936 cgcggccgcgacgggttccggttcgag 4007962 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 156 tcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| |||||||||||| Sbjct: 4007871 tcaccttcgtcaacaccgagcacaaccac 4007899 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 156 tcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| |||||||||||| Sbjct: 4005127 tcaccttcgtcaacaccgagcacaaccac 4005155 Score = 48.1 bits (24), Expect = 0.018 Identities = 60/72 (83%) Strand = Plus / Plus Query: 218 cgcggccgcgacgggttccggttcgagtccgtacccgacgggctggacgacgccgaccgc 277 ||||||||||||||||||| ||||||| | | || ||||| ||| |||||| |||||| Sbjct: 4005192 cgcggccgcgacgggttccagttcgagacgatcccggacggcctgctcgacgcggaccgc 4005251 Query: 278 gccgcccccgac 289 | |||| ||||| Sbjct: 4005252 gacgccgccgac 4005263 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 accacgagcggctgctgcgg 199 |||||||||||||||||||| Sbjct: 24586494 accacgagcggctgctgcgg 24586475
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06, complete sequence Length = 107014 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| | |||||| ||| |||||||| | ||||| Sbjct: 84346 gggccacgtcacgccgatgctgaagctggccgtgctgctccacgcgcgcgggttccacgt 84405 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 84406 caccttcgtcaaca 84419 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Minus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| ||||| ||||||| ||||||| |||| ||||| | ||||| Sbjct: 41086 gggccacgtcacgccgatgctgacgctggcgaagctgctatactcccgcggcttccacgt 41027 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 41026 caccttcgtcaaca 41013
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0685B10 Length = 148544 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| | |||||| ||| |||||||| | ||||| Sbjct: 15106 gggccacgtcacgccgatgctgaagctggccgtgctgctccacgcgcgcgggttccacgt 15165 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 15166 caccttcgtcaaca 15179
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| | |||||| ||| |||||||| | ||||| Sbjct: 58676 gggccacgtcacgccgatgctgaagctggccgtgctgctccacgcgcgcgggttccacgt 58735 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 58736 caccttcgtcaaca 58749
>ref|XM_471859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| ||||||| ||| ||||||| | ||||| Sbjct: 63 gggccacgtcacgccgatgctgaagctggccaagctgctccacgcgcgcggcttccacgt 122 Query: 157 caccttcgtcaacacggagcacaaccac 184 ||||||||||||||| ||| ||||||| Sbjct: 123 caccttcgtcaacaccgagttcaaccac 150
>ref|XM_471823.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| ||||||| ||| ||||||| | ||||| Sbjct: 63 gggccacgtcacgccgatgctgaagctggccaagctgctccacgcgcgcggcttccacgt 122 Query: 157 caccttcgtcaacacggagcacaaccac 184 ||||||||||||||| ||| ||||||| Sbjct: 123 caccttcgtcaacaccgagttcaaccac 150
>emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033P05, complete sequence Length = 120635 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| ||||||| ||| ||||||| | ||||| Sbjct: 45137 gggccacgtcacgccgatgctgaagctggccaagctgctccacgcgcgcggcttccacgt 45078 Query: 157 caccttcgtcaacacggagcacaaccac 184 ||||||||||||||| ||| ||||||| Sbjct: 45077 caccttcgtcaacaccgagttcaaccac 45050 Score = 56.0 bits (28), Expect = 8e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||||||| |||| | |||||||||| ||||||| ||| |||| || | ||||| Sbjct: 57751 gggccacatcacgccgatgatgaagctggccaagctgctccacgcgcgtggcttccacgt 57692 Query: 157 caccttcgtcaacacggagcacaaccac 184 ||||||||||||||| ||| ||||||| Sbjct: 57691 caccttcgtcaacaccgagttcaaccac 57664
>emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04, complete sequence Length = 129563 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| |||||||||||| ||||||| ||| ||||||| | ||||| Sbjct: 75297 gggccacgtcacgccgatgctgaagctggccaagctgctccacgcgcgcggcttccacgt 75356 Query: 157 caccttcgtcaacacggagcacaaccac 184 ||||||||||||||| ||| ||||||| Sbjct: 75357 caccttcgtcaacaccgagttcaaccac 75384 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Minus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| ||||| ||||||| ||||||| |||| ||||| | ||||| Sbjct: 126802 gggccacgtcacgccgatgctgacgctggcgaagctgctatactcccgcggcttccacgt 126743 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 126742 caccttcgtcaaca 126729 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||||| ||| ||||||| Sbjct: 62847 cacgtcaccttcgtcaacaccgagttcaaccac 62879
>ref|XM_471860.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1479 Score = 56.0 bits (28), Expect = 8e-05 Identities = 73/88 (82%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||||||| |||| | |||||||||| ||||||| ||| |||| || | ||||| Sbjct: 48 gggccacatcacgccgatgatgaagctggccaagctgctccacgcgcgtggcttccacgt 107 Query: 157 caccttcgtcaacacggagcacaaccac 184 ||||||||||||||| ||| ||||||| Sbjct: 108 caccttcgtcaacaccgagttcaaccac 135
>ref|XM_480272.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1434 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 218 cgcggccgcgacgggttccggttcgag 244 ||||||||||||||||||||||||||| Sbjct: 166 cgcggccgcgacgggttccggttcgag 192 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 156 tcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| |||||||||||| Sbjct: 101 tcaccttcgtcaacaccgagcacaaccac 129
>ref|NM_195670.1| Oryza sativa (japonica cultivar-group) putative glucosyltransferase (OSJNAa0053D03.20), mRNA Length = 549 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 154 cgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||| |||||||||||| Sbjct: 138 cgtcaccttcgtcaacaccgagcacaaccac 168
>gb|AC131968.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0053D03, complete sequence Length = 150496 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 154 cgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||| |||||||||||| Sbjct: 142591 cgtcaccttcgtcaacaccgagcacaaccac 142621
>gb|AC098682.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0004A10, from chromosome 10, complete sequence Length = 144271 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 154 cgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||| |||||||||||| Sbjct: 92177 cgtcaccttcgtcaacaccgagcacaaccac 92147
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 154 cgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||| |||||||||||| Sbjct: 8339069 cgtcaccttcgtcaacaccgagcacaaccac 8339099 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Minus Query: 154 cgtcaccttcgtcaacacggagcacaaccacg 185 |||||||||||||||||||||| |||||||| Sbjct: 8918999 cgtcaccttcgtcaacacggagttcaaccacg 8918968 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Minus Query: 154 cgtcaccttcgtcaacacggagcacaaccacg 185 |||||||||||||||||||||| |||||||| Sbjct: 8913232 cgtcaccttcgtcaacacggagttcaaccacg 8913201 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 203 ggcggcgcgcggctccgcggccg 225 ||||||||||||||||||||||| Sbjct: 17742977 ggcggcgcgcggctccgcggccg 17742955 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Minus Query: 154 cgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||||||| ||||||| Sbjct: 8992364 cgtcaccttcgtcaacacggagttcaaccac 8992334
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0462E11 Length = 166115 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 218 cgcggccgcgacgggttccggttcgag 244 ||||||||||||||||||||||||||| Sbjct: 95233 cgcggccgcgacgggttccggttcgag 95259 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 156 tcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| |||||||||||| Sbjct: 95168 tcaccttcgtcaacaccgagcacaaccac 95196 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 156 tcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| |||||||||||| Sbjct: 92424 tcaccttcgtcaacaccgagcacaaccac 92452 Score = 48.1 bits (24), Expect = 0.018 Identities = 60/72 (83%) Strand = Plus / Plus Query: 218 cgcggccgcgacgggttccggttcgagtccgtacccgacgggctggacgacgccgaccgc 277 ||||||||||||||||||| ||||||| | | || ||||| ||| |||||| |||||| Sbjct: 92489 cgcggccgcgacgggttccagttcgagacgatcccggacggcctgctcgacgcggaccgc 92548 Query: 278 gccgcccccgac 289 | |||| ||||| Sbjct: 92549 gacgccgccgac 92560
>dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0458D06 Length = 166038 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 218 cgcggccgcgacgggttccggttcgag 244 ||||||||||||||||||||||||||| Sbjct: 1049 cgcggccgcgacgggttccggttcgag 1075 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 156 tcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| |||||||||||| Sbjct: 984 tcaccttcgtcaacaccgagcacaaccac 1012
>dbj|AK106038.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D10, full insert sequence Length = 1666 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 154 cgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||| |||||||||||| Sbjct: 174 cgtcaccttcgtcaacaccgagcacaaccac 204
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 154 cgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||| |||||||||||| Sbjct: 8344168 cgtcaccttcgtcaacaccgagcacaaccac 8344198 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Minus Query: 154 cgtcaccttcgtcaacacggagcacaaccacg 185 |||||||||||||||||||||| |||||||| Sbjct: 8924138 cgtcaccttcgtcaacacggagttcaaccacg 8924107 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Minus Query: 154 cgtcaccttcgtcaacacggagcacaaccacg 185 |||||||||||||||||||||| |||||||| Sbjct: 8918371 cgtcaccttcgtcaacacggagttcaaccacg 8918340 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 203 ggcggcgcgcggctccgcggccg 225 ||||||||||||||||||||||| Sbjct: 17752230 ggcggcgcgcggctccgcggccg 17752208 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Minus Query: 154 cgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||||||| ||||||| Sbjct: 8997503 cgtcaccttcgtcaacacggagttcaaccac 8997473
>ref|XM_471827.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| ||||| ||||||| ||||||| |||| ||||| | ||||| Sbjct: 66 gggccacgtcacgccgatgctgacgctggcgaagctgctatactcccgcggcttccacgt 125 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 126 caccttcgtcaaca 139
>dbj|AK119530.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C07, full insert sequence Length = 1673 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| ||||| ||||||| ||||||| |||| ||||| | ||||| Sbjct: 161 gggccacgtcacgccgatgctgacgctggcgaagctgctatactcccgcggcttccacgt 220 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 221 caccttcgtcaaca 234
>dbj|AK105966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E07, full insert sequence Length = 1665 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| ||||| ||||||| ||||||| |||| ||||| | ||||| Sbjct: 158 gggccacgtcacgccgatgctgacgctggcgaagctgctatactcccgcggcttccacgt 217 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 218 caccttcgtcaaca 231
>dbj|AK105783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G07, full insert sequence Length = 1640 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 97 gggccacatcaacccgacgctgaagctggcggagctgctgcactcgcgcggggtgcacgt 156 ||||||| ||| |||| ||||| ||||||| ||||||| |||| ||||| | ||||| Sbjct: 102 gggccacgtcacgccgatgctgacgctggcgaagctgctatactcccgcggcttccacgt 161 Query: 157 caccttcgtcaaca 170 |||||||||||||| Sbjct: 162 caccttcgtcaaca 175
>ref|XM_480271.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 156 tcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| |||||||||||| Sbjct: 101 tcaccttcgtcaacaccgagcacaaccac 129 Score = 48.1 bits (24), Expect = 0.018 Identities = 60/72 (83%) Strand = Plus / Plus Query: 218 cgcggccgcgacgggttccggttcgagtccgtacccgacgggctggacgacgccgaccgc 277 ||||||||||||||||||| ||||||| | | || ||||| ||| |||||| |||||| Sbjct: 166 cgcggccgcgacgggttccagttcgagacgatcccggacggcctgctcgacgcggaccgc 225 Query: 278 gccgcccccgac 289 | |||| ||||| Sbjct: 226 gacgccgccgac 237
>ref|NM_195768.1| Oryza sativa (japonica cultivar-group) putative glucosyltransferase (OSJNBa0027A14.2), mRNA Length = 1479 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 154 cgtcaccttcgtcaacacggagcacaaccacg 185 |||||||||||||||||||||| |||||||| Sbjct: 114 cgtcaccttcgtcaacacggagttcaaccacg 145
>ref|NM_195767.1| Oryza sativa (japonica cultivar-group) putative glucosyltransferase (OSJNBa0027A14.1), mRNA Length = 543 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Plus Query: 154 cgtcaccttcgtcaacacggagcacaaccacg 185 |||||||||||||||||||||| |||||||| Sbjct: 114 cgtcaccttcgtcaacacggagttcaaccacg 145
>ref|XM_324147.1| Neurospora crassa OR74A predicted protein (NCU04791.1) partial mRNA Length = 1011 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Minus Query: 33 cgatgggagcggccatggcggaggagaagagg 64 ||||||||||||||||| |||||| ||||||| Sbjct: 808 cgatgggagcggccatgtcggaggggaagagg 777
>ref|XM_955324.1| Neurospora crassa OR74A hypothetical protein (NCU04791.1) partial mRNA Length = 1011 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Minus Query: 33 cgatgggagcggccatggcggaggagaagagg 64 ||||||||||||||||| |||||| ||||||| Sbjct: 808 cgatgggagcggccatgtcggaggggaagagg 777
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Minus Query: 154 cgtcaccttcgtcaacacggagcacaaccacg 185 |||||||||||||||||||||| |||||||| Sbjct: 123606 cgtcaccttcgtcaacacggagttcaaccacg 123575 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Minus Query: 154 cgtcaccttcgtcaacacggagcacaaccacg 185 |||||||||||||||||||||| |||||||| Sbjct: 117839 cgtcaccttcgtcaacacggagttcaaccacg 117808
>gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0027A14, from chromosome 10, complete sequence Length = 175667 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Minus Query: 154 cgtcaccttcgtcaacacggagcacaaccacg 185 |||||||||||||||||||||| |||||||| Sbjct: 7222 cgtcaccttcgtcaacacggagttcaaccacg 7191 Score = 48.1 bits (24), Expect = 0.018 Identities = 30/32 (93%) Strand = Plus / Minus Query: 154 cgtcaccttcgtcaacacggagcacaaccacg 185 |||||||||||||||||||||| |||||||| Sbjct: 1455 cgtcaccttcgtcaacacggagttcaaccacg 1424 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Minus Query: 154 cgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||||||| ||||||| Sbjct: 80587 cgtcaccttcgtcaacacggagttcaaccac 80557
>ref|NM_195782.1| Oryza sativa (japonica cultivar-group) hypothetical protein similar to putative retroelements (OSJNBa0027A14.16), mRNA Length = 2778 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Plus Query: 154 cgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||||||| ||||||| Sbjct: 120 cgtcaccttcgtcaacacggagttcaaccac 150
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 46.1 bits (23), Expect = 0.072 Identities = 29/31 (93%) Strand = Plus / Plus Query: 155 gtcaccttcgtcaacacggagcacaaccacg 185 ||||||||||||||||| |||| |||||||| Sbjct: 119351 gtcaccttcgtcaacaccgagctcaaccacg 119381
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 203 ggcggcgcgcggctccgcggccg 225 ||||||||||||||||||||||| Sbjct: 98097 ggcggcgcgcggctccgcggccg 98075
>dbj|AK120835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020I17, full insert sequence Length = 1971 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 203 ggcggcgcgcggctccgcggccg 225 ||||||||||||||||||||||| Sbjct: 34 ggcggcgcgcggctccgcggccg 12
>gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNOa0279P04, complete sequence Length = 32479 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Minus Query: 217 ccgcggccgcgacgggttccggttcgagtc 246 ||||||||||| ||||| |||||||||||| Sbjct: 19641 ccgcggccgcgtcgggtgccggttcgagtc 19612
>dbj|AP003612.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0457B11 Length = 144015 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 caggagctagagctagagctag 22 |||||||||||||||||||||| Sbjct: 80005 caggagctagagctagagctag 79984
>dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0084K06 Length = 177895 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 caggagctagagctagagctag 22 |||||||||||||||||||||| Sbjct: 71222 caggagctagagctagagctag 71243
>dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0486H12 Length = 179085 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 caggagctagagctagagctag 22 |||||||||||||||||||||| Sbjct: 20587 caggagctagagctagagctag 20566
>ref|XM_471848.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||||| ||| ||||||| Sbjct: 112 cacgtcaccttcgtcaacaccgagttcaaccac 144
>ref|XM_471822.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||||| ||| ||||||| Sbjct: 76 cacgtcaccttcgtcaacaccgagttcaaccac 108
>ref|XM_469828.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 gtcaccttcgtcaacacggag 175 ||||||||||||||||||||| Sbjct: 100 gtcaccttcgtcaacacggag 120
>ref|XM_469830.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1632 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 gtcaccttcgtcaacacggag 175 ||||||||||||||||||||| Sbjct: 119 gtcaccttcgtcaacacggag 139
>ref|XM_467864.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||| | ||| |||||||| Sbjct: 127 cacgtcaccttcgtcaactccgagtacaaccac 159
>ref|XM_466413.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1764 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| ||| ||| |||||||| Sbjct: 243 cacgtcaccttcgtcagcaccgagtacaaccac 275
>ref|XM_466409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||| ||||||||||| ||| |||||||| Sbjct: 112 cacgtcacgttcgtcaacaccgagtacaaccac 144
>ref|XM_466410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||| ||||||||||| ||| |||||||| Sbjct: 1228 cacgtcacgttcgtcaacaccgagtacaaccac 1196
>ref|XM_466406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1548 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 ||||||||||||||| |||| ||| |||||||| Sbjct: 142 cacgtcaccttcgtccacaccgagtacaaccac 174
>gb|DQ177333.1| Homo sapiens transient receptor potential vanilloid 1b (TRPV1) mRNA, complete cds, alternatively spliced Length = 2607 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 979 acccgacgctgaagctggaggagct 1003
>gb|DQ177332.1| Homo sapiens transient receptor potential vanilloid 1a (TRPV1) mRNA, complete cds, alternatively spliced Length = 2644 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 1049 acccgacgctgaagctggaggagct 1073
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 gtcaccttcgtcaacacggag 175 ||||||||||||||||||||| Sbjct: 30993010 gtcaccttcgtcaacacggag 30992990 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 gtcaccttcgtcaacacggag 175 ||||||||||||||||||||| Sbjct: 30978224 gtcaccttcgtcaacacggag 30978244 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ggcggaggagaagagggcgc 68 |||||||||||||||||||| Sbjct: 625740 ggcggaggagaagagggcgc 625721
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 gtcaccttcgtcaacacggag 175 ||||||||||||||||||||| Sbjct: 117840 gtcaccttcgtcaacacggag 117820 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 gtcaccttcgtcaacacggag 175 ||||||||||||||||||||| Sbjct: 103054 gtcaccttcgtcaacacggag 103074
>gb|BC017281.2| Homo sapiens hypothetical protein LOC150223, mRNA (cDNA clone IMAGE:4876099), partial cds Length = 1439 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 ggcgcgcggctccgcggccgc 226 ||||||||||||||||||||| Sbjct: 221 ggcgcgcggctccgcggccgc 241
>gb|AC146585.18| Medicago truncatula clone mth2-68o3, complete sequence Length = 124526 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 gagctagagctagagctagcg 24 ||||||||||||||||||||| Sbjct: 1358 gagctagagctagagctagcg 1378
>emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0054D14, complete sequence Length = 160587 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||||| ||| ||||||| Sbjct: 29478 cacgtcaccttcgtcaacaccgagttcaaccac 29510
>emb|AJ438325.1|TAE438325 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt3i3e Length = 612 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 156 tcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| ||| |||||||| Sbjct: 491 tcaccttcgtcaacaccgagtacaaccac 463
>emb|AJ438324.1|TAE438324 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt3i3c Length = 612 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 156 tcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| ||| |||||||| Sbjct: 491 tcaccttcgtcaacaccgagtacaaccac 463
>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence Length = 253733 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 aggagctagagctagagctag 22 ||||||||||||||||||||| Sbjct: 96151 aggagctagagctagagctag 96171
>emb|CR857811.1| Pongo pygmaeus mRNA; cDNA DKFZp459E1630 (from clone DKFZp459E1630) Length = 4735 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 3705 acccgacgctgaagctggaggagct 3729
>gb|AY131289.1| Homo sapiens vanilloid receptor 1 (TRPV1) mRNA, complete cds Length = 2520 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 962 acccgacgctgaagctggaggagct 986
>emb|AL136801.1|HSM801769 Homo sapiens mRNA; cDNA DKFZp434K0220 (from clone DKFZp434K0220) Length = 4187 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 1233 acccgacgctgaagctggaggagct 1257
>ref|NM_018727.4| Homo sapiens transient receptor potential cation channel, subfamily V, member 1 (TRPV1), transcript variant 2, mRNA Length = 4046 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 1120 acccgacgctgaagctggaggagct 1144
>ref|NM_080704.2| Homo sapiens transient receptor potential cation channel, subfamily V, member 1 (TRPV1), transcript variant 1, mRNA Length = 4163 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 1237 acccgacgctgaagctggaggagct 1261
>ref|NM_080705.2| Homo sapiens transient receptor potential cation channel, subfamily V, member 1 (TRPV1), transcript variant 4, mRNA Length = 4089 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 1163 acccgacgctgaagctggaggagct 1187
>ref|NM_080706.2| Homo sapiens transient receptor potential cation channel, subfamily V, member 1 (TRPV1), transcript variant 3, mRNA Length = 4415 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 1489 acccgacgctgaagctggaggagct 1513
>gb|AE005844.1| Caulobacter crescentus CB15 section 170 of 359 of the complete genome Length = 11698 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 gacgacgccgaccgcgccgcc 283 ||||||||||||||||||||| Sbjct: 635 gacgacgccgaccgcgccgcc 655
>gb|AC027796.9| Homo sapiens chromosome 17, clone RP11-235E17, complete sequence Length = 127431 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 73013 acccgacgctgaagctggaggagct 73037
>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds Length = 99431 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 gagctagagctagagctagcg 24 ||||||||||||||||||||| Sbjct: 59874 gagctagagctagagctagcg 59854
>gb|AC009516.19| Homo sapiens chromosome 22 clone p393 map 22q11, complete sequence Length = 169237 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 ggcgcgcggctccgcggccgc 226 ||||||||||||||||||||| Sbjct: 106667 ggcgcgcggctccgcggccgc 106647
>gb|AC018751.30| Homo sapiens clone b9j16, complete sequence Length = 166447 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 ggcgcgcggctccgcggccgc 226 ||||||||||||||||||||| Sbjct: 81195 ggcgcgcggctccgcggccgc 81215
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 gtcaccttcgtcaacacggag 175 ||||||||||||||||||||| Sbjct: 31083533 gtcaccttcgtcaacacggag 31083513 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 gtcaccttcgtcaacacggag 175 ||||||||||||||||||||| Sbjct: 31068747 gtcaccttcgtcaacacggag 31068767 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ggcggaggagaagagggcgc 68 |||||||||||||||||||| Sbjct: 625738 ggcggaggagaagagggcgc 625719
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||| | ||| |||||||| Sbjct: 31807400 cacgtcaccttcgtcaactccgagtacaaccac 31807368 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| ||| ||| |||||||| Sbjct: 22249210 cacgtcaccttcgtcagcaccgagtacaaccac 22249242 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||| ||||||||||| ||| |||||||| Sbjct: 22234743 cacgtcacgttcgtcaacaccgagtacaaccac 22234775 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 ||||||||||||||| |||| ||| |||||||| Sbjct: 22222232 cacgtcaccttcgtccacaccgagtacaaccac 22222264
>gb|AF196176.1|AF196176 Homo sapiens capsaicin receptor variant mRNA, complete cds Length = 4103 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 1163 acccgacgctgaagctggaggagct 1187
>gb|AF196175.1|AF196175 Homo sapiens capsaicin receptor mRNA, complete cds Length = 4129 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 1175 acccgacgctgaagctggaggagct 1199
>gb|AY986821.1| Homo sapiens vanilloid receptor variant TRPV1b (TRPV1) mRNA, complete cds, alternatively spliced Length = 2340 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 962 acccgacgctgaagctggaggagct 986
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| ||| ||| |||||||| Sbjct: 7854 cacgtcaccttcgtcagcaccgagtacaaccac 7886
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 265 cgacgccgaccgcgccgcccccgac 289 ||||||||||||||||||| ||||| Sbjct: 3600220 cgacgccgaccgcgccgccgccgac 3600196
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| ||| ||| |||||||| Sbjct: 145054 cacgtcaccttcgtcagcaccgagtacaaccac 145086 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||| ||||||||||| ||| |||||||| Sbjct: 130587 cacgtcacgttcgtcaacaccgagtacaaccac 130619 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 ||||||||||||||| |||| ||| |||||||| Sbjct: 118076 cacgtcaccttcgtccacaccgagtacaaccac 118108
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||| | ||| |||||||| Sbjct: 103198 cacgtcaccttcgtcaactccgagtacaaccac 103166
>gb|AF168787.1|AF168787 Homo sapiens vanilloid receptor gene, partial sequence; CARKL and CTNS genes, complete cds; TIP1 gene, partial cds; P2X5b and P2X5a genes, complete cds; and HUMINAE gene, partial cds Length = 200237 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 25244 acccgacgctgaagctggaggagct 25220
>dbj|AK106366.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-B11, full insert sequence Length = 1457 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||||| ||| ||||||| Sbjct: 1240 cacgtcaccttcgtcaacaccgagttcaaccac 1208
>dbj|AK105275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-A04, full insert sequence Length = 1764 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||| ||| ||| |||||||| Sbjct: 243 cacgtcaccttcgtcagcaccgagtacaaccac 275
>emb|AJ331922.1|HSA331922 Homo sapiens genomic sequence surrounding NotI site, clone NL1-GP23RS Length = 585 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 ggcgcgcggctccgcggccgc 226 ||||||||||||||||||||| Sbjct: 21 ggcgcgcggctccgcggccgc 1
>emb|AJ272063.2|HSA272063 Homo sapiens mRNA for vanilloid receptor 1 (VR1 gene) Length = 3263 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 1120 acccgacgctgaagctggaggagct 1144
>emb|AJ277028.1|HSA277028 Homo sapiens mRNA for vanilloid receptor 1 (VR1 gene) Length = 3164 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 acccgacgctgaagctggcggagct 132 |||||||||||||||||| |||||| Sbjct: 1489 acccgacgctgaagctggaggagct 1513
>dbj|AK071136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078E19, full insert sequence Length = 1580 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 gtcaccttcgtcaacacggag 175 ||||||||||||||||||||| Sbjct: 136 gtcaccttcgtcaacacggag 156
>dbj|AK066301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M20, full insert sequence Length = 1596 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||||||||||||| | ||| |||||||| Sbjct: 126 cacgtcaccttcgtcaactccgagtacaaccac 158
>dbj|AK064085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B11, full insert sequence Length = 1505 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 152 cacgtcaccttcgtcaacacggagcacaaccac 184 |||||||| ||||||||||| ||| |||||||| Sbjct: 1227 cacgtcacgttcgtcaacaccgagtacaaccac 1195
>dbj|AP000553.1| Homo sapiens genomic DNA, chromosome 22q11.2, BCRL2 region, clone:KB1440D3 Length = 164946 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 ggcgcgcggctccgcggccgc 226 ||||||||||||||||||||| Sbjct: 34012 ggcgcgcggctccgcggccgc 33992
>ref|NM_102088.2| Arabidopsis thaliana transcription factor/ transferase, transferring glycosyl groups AT1G22380 mRNA, complete cds Length = 1602 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacac 171 |||||||||||||||||||| Sbjct: 121 cacgtcaccttcgtcaacac 140
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 gctgaagctggcggagctgctgca 138 |||| ||||||||||||||||||| Sbjct: 119694 gctgtagctggcggagctgctgca 119717
>ref|XM_507282.1| PREDICTED Oryza sativa (japonica cultivar-group), P0026F07.26-2 mRNA Length = 1149 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 accacgagcggctgctgcgg 199 |||||||||||||||||||| Sbjct: 718 accacgagcggctgctgcgg 737
>ref|XM_483170.1| Oryza sativa (japonica cultivar-group), mRNA Length = 612 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 accacgagcggctgctgcgg 199 |||||||||||||||||||| Sbjct: 383 accacgagcggctgctgcgg 402
>ref|XM_483169.1| Oryza sativa (japonica cultivar-group), mRNA Length = 879 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 accacgagcggctgctgcgg 199 |||||||||||||||||||| Sbjct: 650 accacgagcggctgctgcgg 669
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 gctgaagctggcggagctgctgca 138 |||| ||||||||||||||||||| Sbjct: 119505 gctgtagctggcggagctgctgca 119528
>ref|XM_322738.1| Neurospora crassa OR74A hypothetical protein (NCU03481.1) partial mRNA Length = 4035 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggagctagagctagagctag 22 |||||||||||||||||||| Sbjct: 1824 ggagctagagctagagctag 1805
>ref|XM_951277.1| Neurospora crassa OR74A hypothetical protein (NCU03481.1) partial mRNA Length = 4035 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggagctagagctagagctag 22 |||||||||||||||||||| Sbjct: 1824 ggagctagagctagagctag 1805
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 cgccgaccgcgccgcccccg 287 |||||||||||||||||||| Sbjct: 3078576 cgccgaccgcgccgcccccg 3078557
>gb|AC145070.10| Mus musculus chromosome 5, clone RP23-41I11, complete sequence Length = 180113 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gagctagagctagagctagc 23 |||||||||||||||||||| Sbjct: 53347 gagctagagctagagctagc 53328
>gb|AC131715.3| Mus musculus BAC clone RP23-180N22 from chromosome 6, complete sequence Length = 180102 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gagctagagctagagctagc 23 |||||||||||||||||||| Sbjct: 177093 gagctagagctagagctagc 177112
>ref|XM_446467.1| Candida glabrata CBS138, CAGL0G02409g partial mRNA Length = 1116 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggagctagagctagagctag 22 |||||||||||||||||||| Sbjct: 78 ggagctagagctagagctag 59
>ref|XM_843635.1| PREDICTED: Canis familiaris similar to CG12360-PA, isoform A (LOC607061), mRNA Length = 2172 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gcggacgggcggcgcgcggc 215 |||||||||||||||||||| Sbjct: 422 gcggacgggcggcgcgcggc 403
>emb|AL357395.13| Human DNA sequence from clone RP11-31L23 on chromosome 10 Contains the TLX1 gene for T-cell leukemia homeobox 1, the 5' end of a novel gene, the C10orf1 gene for chromosome 10 open reading frame 1 and four CpG islands, complete sequence Length = 51099 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ggctccgcggccgcgacggg 232 |||||||||||||||||||| Sbjct: 35460 ggctccgcggccgcgacggg 35479
>emb|AL022315.1|HS1177I5 Human DNA sequence from clone RP5-1177I5 on chromosome 22q13.1, complete sequence Length = 96256 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 cgcgcggctccgcggccgcg 227 |||||||||||||||||||| Sbjct: 63127 cgcgcggctccgcggccgcg 63108
>emb|X17251.1|CFPGKAG C.fasciculata PGK-A gene for glycosomal protein Length = 1831 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tgaagctggcggagctgctg 136 |||||||||||||||||||| Sbjct: 675 tgaagctggcggagctgctg 694
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ggagctagagctagagctag 22 |||||||||||||||||||| Sbjct: 215875 ggagctagagctagagctag 215894
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 40.1 bits (20), Expect = 4.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 265 cgacgccgaccgcgccgcccccgacaagacgg 296 ||||||||||| ||||||| || ||||||||| Sbjct: 164477 cgacgccgacctcgccgccgcctacaagacgg 164446
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 cgccgaccgcgccgcccccg 287 |||||||||||||||||||| Sbjct: 1257400 cgccgaccgcgccgcccccg 1257381
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 cgccgaccgcgccgcccccg 287 |||||||||||||||||||| Sbjct: 59252 cgccgaccgcgccgcccccg 59233
>emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II BAC contig B23H20 Length = 122151 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggagctagagctagagctag 22 |||||||||||||||||||| Sbjct: 97525 ggagctagagctagagctag 97506
>emb|AL669989.1|NCB8L21 Neurospora crassa DNA linkage group II BAC clone B8L21 Length = 70704 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ggagctagagctagagctag 22 |||||||||||||||||||| Sbjct: 46259 ggagctagagctagagctag 46278
>emb|AL031825.1|SPCC757 S.pombe chromosome III cosmid c757 Length = 37228 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggagctagagctagagctag 22 |||||||||||||||||||| Sbjct: 31002 ggagctagagctagagctag 30983
>emb|AJ009794.1|HSA9794 Homo sapiens hox11 proto-oncogene, exons 1 to 3 and hug-1 gene Length = 20074 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ggctccgcggccgcgacggg 232 |||||||||||||||||||| Sbjct: 12798 ggctccgcggccgcgacggg 12817
>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent ansamitocin biosynthetic gene cluster I, partial sequence Length = 82746 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 cgacgccgaccgcgccgccc 284 |||||||||||||||||||| Sbjct: 68989 cgacgccgaccgcgccgccc 68970
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 tgtcgctgcgcaggagctgc 328 |||||||||||||||||||| Sbjct: 1218884 tgtcgctgcgcaggagctgc 1218865
>gb|S38742.1| HOX11=HOX11 homeodomain {homeobox} [human, mRNA, 1988 nt] Length = 1988 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ggctccgcggccgcgacggg 232 |||||||||||||||||||| Sbjct: 279 ggctccgcggccgcgacggg 298
>ref|NM_001022682.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC757.12), partial mRNA Length = 1878 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggagctagagctagagctag 22 |||||||||||||||||||| Sbjct: 1617 ggagctagagctagagctag 1598
>gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12K8 genomic sequence, complete sequence Length = 107200 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cacgtcaccttcgtcaacac 171 |||||||||||||||||||| Sbjct: 105823 cacgtcaccttcgtcaacac 105842
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cgccgaccgcgccgcccccg 287 |||||||||||||||||||| Sbjct: 1378003 cgccgaccgcgccgcccccg 1378022
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggagctagagctagagctag 22 |||||||||||||||||||| Sbjct: 20036546 ggagctagagctagagctag 20036527
>gb|AC158651.12| Mus musculus BAC RP24-68I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190089 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gagctagagctagagctagc 23 |||||||||||||||||||| Sbjct: 85329 gagctagagctagagctagc 85310
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggagctagagctagagctag 22 |||||||||||||||||||| Sbjct: 139455 ggagctagagctagagctag 139436
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17 Length = 139014 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggagctagagctagagctag 22 |||||||||||||||||||| Sbjct: 34508 ggagctagagctagagctag 34489
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gaagctggcggagctgctgc 137 |||||||||||||||||||| Sbjct: 3465796 gaagctggcggagctgctgc 3465815
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gacgacgccgaccgcgccgc 282 |||||||||||||||||||| Sbjct: 3061732 gacgacgccgaccgcgccgc 3061751 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tggacgacgccgaccgcgcc 280 |||||||||||||||||||| Sbjct: 2804077 tggacgacgccgaccgcgcc 2804058
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ggcggaggagaagagggcgc 68 |||||||||||||||||||| Sbjct: 11621 ggcggaggagaagagggcgc 11602
>gb|AY071906.1| Lutzomyia longipalpis period gene, partial cds Length = 921 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gatgatgttcccgttcccgt 92 |||||||||||||||||||| Sbjct: 878 gatgatgttcccgttcccgt 859
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 accacgagcggctgctgcgg 199 |||||||||||||||||||| Sbjct: 94754 accacgagcggctgctgcgg 94735
>gb|AE005079.1| Halobacterium sp. NRC-1 section 110 of 170 of the complete genome Length = 12797 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 cgcgacgggttccggttcga 243 |||||||||||||||||||| Sbjct: 12521 cgcgacgggttccggttcga 12502
>gb|AE005076.1| Halobacterium sp. NRC-1 section 107 of 170 of the complete genome Length = 12928 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 cgcgacgggttccggttcga 243 |||||||||||||||||||| Sbjct: 10405 cgcgacgggttccggttcga 10386
>dbj|AK065515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030H15, full insert sequence Length = 1466 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 accacgagcggctgctgcgg 199 |||||||||||||||||||| Sbjct: 871 accacgagcggctgctgcgg 890
>dbj|AK061757.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A06, full insert sequence Length = 1149 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 accacgagcggctgctgcgg 199 |||||||||||||||||||| Sbjct: 718 accacgagcggctgctgcgg 737
>dbj|AK060379.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-D11, full insert sequence Length = 1037 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ggcggaggagaagagggcgc 68 |||||||||||||||||||| Sbjct: 644 ggcggaggagaagagggcgc 663
>gb|AC122771.10| Mus musculus chromosome 1, clone RP24-156G20, complete sequence Length = 207446 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ggagctagagctagagctag 22 |||||||||||||||||||| Sbjct: 169497 ggagctagagctagagctag 169516
>ref|NM_005521.2| Homo sapiens T-cell leukemia homeobox 1 (TLX1), mRNA Length = 2898 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ggctccgcggccgcgacggg 232 |||||||||||||||||||| Sbjct: 1199 ggctccgcggccgcgacggg 1218
>gb|M75952.1|HUMHOX H.sapiens homeobox protein (HOX-11) mRNA, complete cds Length = 1872 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ggctccgcggccgcgacggg 232 |||||||||||||||||||| Sbjct: 193 ggctccgcggccgcgacggg 212
>gb|M62626.1|HUMTCL3 Human T lymphocyte homeobox protein mRNA, partial cds Length = 2898 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ggctccgcggccgcgacggg 232 |||||||||||||||||||| Sbjct: 1199 ggctccgcggccgcgacggg 1218 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,005,444 Number of Sequences: 3902068 Number of extensions: 2005444 Number of successful extensions: 49742 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47587 Number of HSP's gapped (non-prelim): 2155 length of query: 337 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 315 effective length of database: 17,147,199,772 effective search space: 5401367928180 effective search space used: 5401367928180 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
