ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart51g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase... 38 0.012
2DSX_DROME (P23023) Protein doublesex 35 0.059
3GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and bra... 35 0.077
4LTK_HUMAN (P29376) Leukocyte tyrosine kinase receptor precursor ... 32 0.85
5LCMT1_CRYNE (Q5KLL9) Leucine carboxyl methyltransferase 1 (EC 2.... 32 0.85
6KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3... 31 1.1
7CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6 31 1.1
8AGO1_ARATH (O04379) Argonaute protein 31 1.5
9MEGF6_HUMAN (O75095) Multiple epidermal growth factor-like domai... 30 2.5
10PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4... 30 3.2
11DHX57_HUMAN (Q6P158) Putative ATP-dependent RNA helicase DHX57 (... 30 3.2
12DNJA3_MOUSE (Q99M87) DnaJ homolog subfamily A member 3, mitochon... 30 3.2
13SALL2_HUMAN (Q9Y467) Sal-like protein 2 (Zinc finger protein SAL... 29 4.2
14ADA2C_RAT (P22086) Alpha-2C adrenergic receptor (Alpha-2C adreno... 29 4.2
15ADA2C_MOUSE (Q01337) Alpha-2C adrenergic receptor (Alpha-2C adre... 29 4.2
16DNJA3_HUMAN (Q96EY1) DnaJ homolog subfamily A member 3, mitochon... 29 4.2
17XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG pr... 29 4.2
18CTND2_MOUSE (O35927) Catenin delta-2 (Neural plakophilin-related... 29 5.5
19NOSZ_RALEU (Q59105) Nitrous-oxide reductase precursor (EC 1.7.99... 29 5.5
20IF2_CORDI (Q6NGN2) Translation initiation factor IF-2 29 5.5
21DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (... 29 5.5
22MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial pre... 29 5.5
23SDK1_CHICK (Q8AV58) Protein sidekick-1 precursor 29 5.5
24HXD3_CHICK (O93353) Homeobox protein Hox-D3 29 5.5
25HXA3_CHICK (Q7T3J5) Homeobox protein Hox-A3 29 5.5
26WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family mem... 25 7.1
27NUT1_MAGGR (Q01168) Nitrogen regulatory protein NUT1 28 7.2
28MURG_RALSO (Q8XVI7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe... 28 7.2
29PRTC_STRGR (P52320) Serine protease C precursor (EC 3.4.21.-) (S... 28 7.2
30RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine syntha... 28 7.2
31SEF1_ASHGO (Q74Z37) Suppressor protein SEF1 homolog 28 9.4
32MI43_MYCIT (Q03490) 27 kDa lipoprotein antigen precursor (Mi43 a... 28 9.4
33FTR_RHOBA (Q7UKZ8) Formylmethanofuran--tetrahydromethanopterin f... 28 9.4

>PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase (EC 3.1.2.-)|
           (Protein X) (ORF-1)
          Length = 361

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 178 CANRTRLPLRPSARTTERTDLPPHHFVRDPGRQRRRPATTKDES 309
           CA+R R P+RP  RT    D PP +  R    +R  P TT D++
Sbjct: 69  CADRHRCPVRPGPRTRGPADPPPANTDRRQNHRRDSPVTTADDT 112



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>DSX_DROME (P23023) Protein doublesex|
          Length = 549

 Score = 35.4 bits (80), Expect = 0.059
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -2

Query: 167 PETRDVTQPSVRQP---SRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGG 18
           P  +  TQ ++R P     GG+ G    S GG  P  +   +A S+NG+ GGG
Sbjct: 223 PHQQPATQTALRSPPHSDHGGSVGPATSSSGGGAPSSSNAAAATSSNGSSGGG 275



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>GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and brain-specific|
           homeobox protein 2)
          Length = 340

 Score = 35.0 bits (79), Expect = 0.077
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = -2

Query: 128 PSRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGGPSRTP 3
           P  GG  G+D ++ GG  P PAA     S  GA  GGP   P
Sbjct: 136 PDGGGGGGDDGKTGGGLLPFPAADAVHASLAGALRGGPKDDP 177



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>LTK_HUMAN (P29376) Leukocyte tyrosine kinase receptor precursor (EC 2.7.10.1)|
           (Protein tyrosine kinase 1)
          Length = 864

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
 Frame = -3

Query: 310 GTRPSSLLAAGVACRDRERSDAEAGLCVPWCERWGGEGGEYGSRSVHCRRREM*LNPAYA 131
           G+  S L+  G +    E +  +    VP   RW G GG  G  +   R R   L P   
Sbjct: 171 GSPESQLVCLGESRAVEEHAAMDGSEGVPGSRRWAGGGGGGGGATYVFRVRAGELEPLLV 230

Query: 130 SRRGGAR-------EGRTNGAEE 83
           +  GG R        GRT  + E
Sbjct: 231 AAGGGGRAYLRPRDRGRTQASPE 253



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>LCMT1_CRYNE (Q5KLL9) Leucine carboxyl methyltransferase 1 (EC 2.1.1.-) (Protein|
           phosphatase methyltransferase 1)
          Length = 398

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +2

Query: 2   PASSTDHRPLLRSCSLRCAPPRAGGTHLLCSVRPPLSRP 118
           P ++  HRP  R    RC PP      L   VRPP+S P
Sbjct: 27  PNAAPAHRPAPRPALGRCRPPHRRRRRLRPPVRPPVSLP 65



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>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -2

Query: 167 PETRDVTQPSVRQPSRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGGPSRT 6
           P TRDVT    R+P+R G  G  +  + G        R+  ++ G  GG  S++
Sbjct: 126 PPTRDVTS---RRPARAGQTGTRKSPQDGAWARGPTTRTGPASRGGRGGATSKS 176



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>CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6|
          Length = 704

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = -2

Query: 155 DVTQPSVRQPSRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGGPSRTP 3
           +V  P   +P   GA G +     G      A R A +   A GGGP R P
Sbjct: 19  EVPAPLAERPGEPGAAGGEAEGPEGSEGAEEAPRGAAAVKEAGGGGPDRGP 69



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>AGO1_ARATH (O04379) Argonaute protein|
          Length = 1048

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/52 (36%), Positives = 21/52 (40%)
 Frame = -2

Query: 158 RDVTQPSVRQPSRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGGPSRTP 3
           R   QP  +Q   GG +    R RGG    P      G   G  GGGPS  P
Sbjct: 62  RGYGQPPQQQQQYGGPQEYQGRGRGG----PPHQGGRGGYGGGRGGGPSSGP 109



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>MEGF6_HUMAN (O75095) Multiple epidermal growth factor-like domains 6 precursor|
           (EGF-like domain-containing protein 3) (Multiple
           EGF-like domain protein 3)
          Length = 1229

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 7/84 (8%)
 Frame = -3

Query: 292 LLAAGVACRDRERSDAEAGLCVPWCERWGGE-------GGEYGSRSVHCRRREM*LNPAY 134
           L A G AC D +   A    C   C    G        G E G+    C R EM +  + 
Sbjct: 171 LAADGKACEDVDECAAGLAQCAHGCLNTQGSFKCVCHAGYELGADGRQCYRIEMEIVNSC 230

Query: 133 ASRRGGAREGRTNGAEEVSAPCPR 62
            +  GG   G ++ +      CPR
Sbjct: 231 EANNGGCSHGCSHTSAGPLCTCPR 254



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>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of|
           Numb-protein X 4) (SEMACAP3-like protein)
          Length = 1036

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
 Frame = -2

Query: 143 PSVRQPSRGGAR----GEDERSRGGECPLPAAVRSAGSTNGAEGG--GPSRTP 3
           P+ R  SRGG      G +  +RGG  P P A R  G+  G  GG  G  R P
Sbjct: 108 PARRLRSRGGCASGLGGGEVPARGGCGPTPRAGRGGGARGGPPGGRWGRGRGP 160



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>DHX57_HUMAN (Q6P158) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)|
           (DEAH box protein 57)
          Length = 1386

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 131 QPSRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGG 18
           +P +GG +G     RGG      +  S G   G  GGG
Sbjct: 10  KPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGG 47



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>DNJA3_MOUSE (Q99M87) DnaJ homolog subfamily A member 3, mitochondrial precursor|
           (Tumorous imaginal discs protein Tid56 homolog) (DnaJ
           protein Tid-1) (mTid-1)
          Length = 480

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 22/71 (30%), Positives = 29/71 (40%)
 Frame = -3

Query: 220 CERWGGEGGEYGSRSVHCRRREM*LNPAYASRRGGAREGRTNGAEEVSAPCPRRCAAQGA 41
           CER  G+G E G++  HC          Y    G   E    G   + + C RRC  +G+
Sbjct: 236 CERCDGKGNEPGTKVQHCH---------YCG--GSGMETINTGPFVMRSTC-RRCGGRGS 283

Query: 40  RTEQRAVVRRG 8
                 VV RG
Sbjct: 284 IITNPCVVCRG 294



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>SALL2_HUMAN (Q9Y467) Sal-like protein 2 (Zinc finger protein SALL2) (HSal2)|
          Length = 1007

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = -1

Query: 270 AGIANEVMRRQVCAFRGAS---AGAEREASTVRAASTAGDERCNSTQRT 133
           AG  +E    +  + RG S   +GAE E  TV AA+TAG E  ++ + T
Sbjct: 784 AGRGSESGGEKAISVRGDSEEASGAEEEVGTVAAAATAGKEMDSNEKTT 832



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>ADA2C_RAT (P22086) Alpha-2C adrenergic receptor (Alpha-2C adrenoceptor)|
           (Alpha-2C adrenoreceptor) (Alpha-2 adrenergic receptor
           subtype C4)
          Length = 458

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 133 ASRRGGAR-EGRTNGAEEVSAPCPRRCAAQGARTEQRAVVRRGR 5
           A RRGG R EG          P P   A QGART  R+    GR
Sbjct: 297 ALRRGGRRREGAEGDTGSADGPGPGLAAEQGARTASRSPGPGGR 340



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>ADA2C_MOUSE (Q01337) Alpha-2C adrenergic receptor (Alpha-2C adrenoceptor)|
           (Alpha-2C adrenoreceptor) (Alpha-2 adrenergic receptor
           subtype C4)
          Length = 458

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 133 ASRRGGAR-EGRTNGAEEVSAPCPRRCAAQGARTEQRAVVRRGR 5
           A RRGG R EG          P P   A QGART  R+    GR
Sbjct: 297 ALRRGGRRREGAEGDTGSADGPGPGLAAEQGARTASRSPGPGGR 340



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>DNJA3_HUMAN (Q96EY1) DnaJ homolog subfamily A member 3, mitochondrial precursor|
           (Tumorous imaginal discs protein Tid56 homolog) (DnaJ
           protein Tid-1) (hTid-1)
          Length = 480

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 22/71 (30%), Positives = 29/71 (40%)
 Frame = -3

Query: 220 CERWGGEGGEYGSRSVHCRRREM*LNPAYASRRGGAREGRTNGAEEVSAPCPRRCAAQGA 41
           CER  G+G E G++  HC          Y    G   E    G   + + C RRC  +G+
Sbjct: 236 CERCNGKGNEPGTKVQHCH---------YCG--GSGMETINTGPFVMRSTC-RRCGGRGS 283

Query: 40  RTEQRAVVRRG 8
                 VV RG
Sbjct: 284 IIISPCVVCRG 294



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>XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG protein)|
          Length = 439

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 12/72 (16%)
 Frame = -2

Query: 182 AQRPLPETRDVTQPSVRQ---PSRGGARGEDERSRGGECPLPA---------AVRSAGST 39
           A  P P   +   P+  +   P+   A GE      GE P PA         A    G+ 
Sbjct: 258 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEGEAPAPAPAEGGAP 317

Query: 38  NGAEGGGPSRTP 3
           + AEGG P+  P
Sbjct: 318 SPAEGGAPAAAP 329



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>CTND2_MOUSE (O35927) Catenin delta-2 (Neural plakophilin-related ARM-repeat|
           protein) (NPRAP) (Neurojungin)
          Length = 1247

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +3

Query: 33  SVRAPCAAHRRGQGALTSSAPFVLPSRAPPRRLAYAGLSYISRLRQWTL--REPYSPPSP 206
           S + P + H     AL  +AP  LP+R+   R A    S  +  R   L   EP  PP P
Sbjct: 165 SFQYPASYHSNQTLALGDTAPSQLPARSTQARAAGQSFSQGTTGRAGHLAGSEPAPPPPP 224

Query: 207 PQ 212
           P+
Sbjct: 225 PR 226



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>NOSZ_RALEU (Q59105) Nitrous-oxide reductase precursor (EC 1.7.99.6) (N(2)OR)|
           (N2O reductase)
          Length = 643

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
 Frame = -3

Query: 313 LGTRPSSLLAAGVACRDRERSDAEAGLCVPWCERWGGEGGEYGS-RSVHCRRREM*LNPA 137
           LGT   + LA  VAC D+  + A A +  P     G  G  +G+  SVH +  E  L+  
Sbjct: 21  LGTAALAGLAGVVACTDKGAAPAAAAVGAP---ASGAHGAAHGAGASVHLKPGE--LDTY 75

Query: 136 YASRRGGARE-----GRTNGAEEVSAPC--PRRCAAQGARTEQRAVV 17
           Y    GG        G  +G E +  PC  P      G   E + V+
Sbjct: 76  YGLWSGGHTGDMRVLGLPSGREILRIPCFVPDALVGWGITNESKKVM 122



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>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2|
          Length = 953

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 11/54 (20%)
 Frame = -2

Query: 146 QPSVRQPSRGGARGEDERSRGGECPLPAAV-----------RSAGSTNGAEGGG 18
           QP  +  SR    G  ER  GG  P PA +           RS GS NG  G G
Sbjct: 233 QPRPQGGSRSQQSGGQERQGGGRRPSPAMMPTHPNPGQMPSRSNGSRNGRGGAG 286



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>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent|
           RNA helicase deaD)
          Length = 642

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 24/72 (33%), Positives = 25/72 (34%)
 Frame = -3

Query: 226 PWCERWGGEGGEYGSRSVHCRRREM*LNPAYASRRGGAREGRTNGAEEVSAPCPRRCAAQ 47
           P  ER GG     G R     RRE         R GG  EGR    E      P R  A 
Sbjct: 566 PRTERRGGGERREGGRGFGGERREGGRGFGGERREGGRGEGRRFSGERREGRAPGRDDAS 625

Query: 46  GARTEQRAVVRR 11
             R +  A  RR
Sbjct: 626 APRRDDSAGRRR 637



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>MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial precursor (PTP)|
           (Solute carrier family 25 member 3)
          Length = 357

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +3

Query: 105 PSRAPPRRLAYAGLSYISRLRQWTLREPYSPPSPPQRSHH 224
           P  AP  +L + GLS            P SPP+PP+RS H
Sbjct: 13  PFNAPHLQLVHDGLS-----------GPRSPPAPPRRSRH 41



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>SDK1_CHICK (Q8AV58) Protein sidekick-1 precursor|
          Length = 2169

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
 Frame = +3

Query: 48  CAAHRRGQGALTSSAPFVL----PSRAPPRRLAYAGLSYISRLRQWTLREPYSPPSPPQR 215
           CA ++ G+G  +S    ++    P  APP+ +  +G +  S + QW          PP+ 
Sbjct: 696 CAVNQVGKGQYSSETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQW--------QPPPES 747

Query: 216 SHHG 227
            H+G
Sbjct: 748 EHNG 751



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>HXD3_CHICK (O93353) Homeobox protein Hox-D3|
          Length = 413

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 60  RRGQGALTSSAPFVLPSRAPPRRLAYAGLSYISRLRQWTLREPYSPPSPP--QRSHHGTH 233
           ++G+G +TSS     PSR+P   +  A   Y++ +       PY P SPP   + H  T+
Sbjct: 232 QKGKGMMTSSGG-QSPSRSP---VPPAAGGYLNSMHSLVNSVPYEPQSPPPFNKPHQNTY 287



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>HXA3_CHICK (Q7T3J5) Homeobox protein Hox-A3|
          Length = 413

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 60  RRGQGALTSSAPFVLPSRAPPRRLAYAGLSYISRLRQWTLREPYSPPSPP--QRSHHGTH 233
           ++G+G +TSS     PSR+P   +  A   Y++ +       PY P SPP   + H  T+
Sbjct: 232 QKGKGMMTSSGG-QSPSRSP---VPPAAGGYLNSMHSLVNSVPYEPQSPPPFNKPHQNTY 287



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>WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family member 3|
           (WASP-family protein member 3) (WAVE-3 protein)
           (Verprolin homology domain-containing protein 3)
          Length = 502

 Score = 25.0 bits (53), Expect(2) = 7.1
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +2

Query: 44  SLRCAPPRAGGTHLLCSVRPPLSRPPSTAG 133
           S   APP    T LL +  PP   PP   G
Sbjct: 377 STHAAPPHPPSTGLLVTAPPPPGPPPPPPG 406



 Score = 21.9 bits (45), Expect(2) = 7.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 19  PPPSAPFVLPALRTA 63
           PPP  P V+P+ +TA
Sbjct: 344 PPPPPPPVIPSAQTA 358



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>NUT1_MAGGR (Q01168) Nitrogen regulatory protein NUT1|
          Length = 956

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 152 VTQPSVRQPSRGGARGEDERSRGGECPLPAAVRSAGS 42
           +T+   R P R  A G D  S   + PLPA++R   S
Sbjct: 5   ITEHDFRFPRRPAAPGRDPGSDSSDDPLPASLRELNS 41



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>MURG_RALSO (Q8XVI7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 365

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
 Frame = -1

Query: 270 AGIANEVMRRQ----VCAFRGASAGAEREASTVRA 178
           AG+AN V+ R     +CAF GA  GAE   + +RA
Sbjct: 135 AGLANRVLARVADRVLCAFPGALPGAEWVGNPIRA 169



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>PRTC_STRGR (P52320) Serine protease C precursor (EC 3.4.21.-) (SGPC)|
          Length = 457

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -1

Query: 273 PAGIANEVMRRQVCAFRGASAGAEREASTVRAASTAGDERCNS 145
           P G  + V R  VCA  G S G+    S  +  ++ G   C+S
Sbjct: 328 PEGTISGVTRTSVCAEPGDSGGSYISGSQAQGVTSGGSGNCSS 370



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>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 550

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 19/57 (33%), Positives = 22/57 (38%)
 Frame = -2

Query: 173 PLPETRDVTQPSVRQPSRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGGPSRTP 3
           P    R   +PS  +P  GG RG    +RG   P     R  G   GA  G   R P
Sbjct: 480 PYGAARPAGRPSGGRPGPGGNRGPASANRGPGGP-GGGARGPGGPGGAPRGPGGRPP 535



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>SEF1_ASHGO (Q74Z37) Suppressor protein SEF1 homolog|
          Length = 1051

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = -2

Query: 170 LPETRDVTQPSVRQPSRGGARGEDERSRGGECPLPAAVRSAGSTNGA 30
           +P    + Q    Q S+GG +GE  RS  G  PL A + + GS NGA
Sbjct: 796 VPTKNAILQAKKLQRSQGGQKGEPIRSING-IPL-AMLDATGSVNGA 840



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>MI43_MYCIT (Q03490) 27 kDa lipoprotein antigen precursor (Mi43 antigen)|
          Length = 262

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 10/61 (16%)
 Frame = -2

Query: 155 DVTQPS--VRQPSRGGARGED--------ERSRGGECPLPAAVRSAGSTNGAEGGGPSRT 6
           DVTQ S  + +P+ G A G+           S  G CP P      G+++    G PS  
Sbjct: 106 DVTQGSCLIVKPTEGSAPGQPVTAAKVKISESVNGTCPKPHESTPGGASSTPPSGSPSPA 165

Query: 5   P 3
           P
Sbjct: 166 P 166



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>FTR_RHOBA (Q7UKZ8) Formylmethanofuran--tetrahydromethanopterin|
           formyltransferase (EC 2.3.1.101) (H4MPT
           formyltransferase)
          Length = 334

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 295 SLLAAGVACRDRERS-DAEAGLCVPWCERWGGEGGEYGSRSVHCRR 161
           ++LA G++ +D E+     AG CV  C      GG  G R VH +R
Sbjct: 83  AILAFGMSGKDLEKQIPRRAGQCVLTCPTTALYGGIPGGREVHPKR 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,438,805
Number of Sequences: 219361
Number of extensions: 1119153
Number of successful extensions: 4746
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4736
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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