Clone Name | bart51g07 |
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Clone Library Name | barley_pub |
>PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase (EC 3.1.2.-)| (Protein X) (ORF-1) Length = 361 Score = 37.7 bits (86), Expect = 0.012 Identities = 18/44 (40%), Positives = 24/44 (54%) Frame = +1 Query: 178 CANRTRLPLRPSARTTERTDLPPHHFVRDPGRQRRRPATTKDES 309 CA+R R P+RP RT D PP + R +R P TT D++ Sbjct: 69 CADRHRCPVRPGPRTRGPADPPPANTDRRQNHRRDSPVTTADDT 112
>DSX_DROME (P23023) Protein doublesex| Length = 549 Score = 35.4 bits (80), Expect = 0.059 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = -2 Query: 167 PETRDVTQPSVRQP---SRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGG 18 P + TQ ++R P GG+ G S GG P + +A S+NG+ GGG Sbjct: 223 PHQQPATQTALRSPPHSDHGGSVGPATSSSGGGAPSSSNAAAATSSNGSSGGG 275
>GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) Length = 340 Score = 35.0 bits (79), Expect = 0.077 Identities = 18/42 (42%), Positives = 21/42 (50%) Frame = -2 Query: 128 PSRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGGPSRTP 3 P GG G+D ++ GG P PAA S GA GGP P Sbjct: 136 PDGGGGGGDDGKTGGGLLPFPAADAVHASLAGALRGGPKDDP 177
>LTK_HUMAN (P29376) Leukocyte tyrosine kinase receptor precursor (EC 2.7.10.1)| (Protein tyrosine kinase 1) Length = 864 Score = 31.6 bits (70), Expect = 0.85 Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 7/83 (8%) Frame = -3 Query: 310 GTRPSSLLAAGVACRDRERSDAEAGLCVPWCERWGGEGGEYGSRSVHCRRREM*LNPAYA 131 G+ S L+ G + E + + VP RW G GG G + R R L P Sbjct: 171 GSPESQLVCLGESRAVEEHAAMDGSEGVPGSRRWAGGGGGGGGATYVFRVRAGELEPLLV 230 Query: 130 SRRGGAR-------EGRTNGAEE 83 + GG R GRT + E Sbjct: 231 AAGGGGRAYLRPRDRGRTQASPE 253
>LCMT1_CRYNE (Q5KLL9) Leucine carboxyl methyltransferase 1 (EC 2.1.1.-) (Protein| phosphatase methyltransferase 1) Length = 398 Score = 31.6 bits (70), Expect = 0.85 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = +2 Query: 2 PASSTDHRPLLRSCSLRCAPPRAGGTHLLCSVRPPLSRP 118 P ++ HRP R RC PP L VRPP+S P Sbjct: 27 PNAAPAHRPAPRPALGRCRPPHRRRRRLRPPVRPPVSLP 65
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = -2 Query: 167 PETRDVTQPSVRQPSRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGGPSRT 6 P TRDVT R+P+R G G + + G R+ ++ G GG S++ Sbjct: 126 PPTRDVTS---RRPARAGQTGTRKSPQDGAWARGPTTRTGPASRGGRGGATSKS 176
>CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6| Length = 704 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = -2 Query: 155 DVTQPSVRQPSRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGGPSRTP 3 +V P +P GA G + G A R A + A GGGP R P Sbjct: 19 EVPAPLAERPGEPGAAGGEAEGPEGSEGAEEAPRGAAAVKEAGGGGPDRGP 69
>AGO1_ARATH (O04379) Argonaute protein| Length = 1048 Score = 30.8 bits (68), Expect = 1.5 Identities = 19/52 (36%), Positives = 21/52 (40%) Frame = -2 Query: 158 RDVTQPSVRQPSRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGGPSRTP 3 R QP +Q GG + R RGG P G G GGGPS P Sbjct: 62 RGYGQPPQQQQQYGGPQEYQGRGRGG----PPHQGGRGGYGGGRGGGPSSGP 109
>MEGF6_HUMAN (O75095) Multiple epidermal growth factor-like domains 6 precursor| (EGF-like domain-containing protein 3) (Multiple EGF-like domain protein 3) Length = 1229 Score = 30.0 bits (66), Expect = 2.5 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 7/84 (8%) Frame = -3 Query: 292 LLAAGVACRDRERSDAEAGLCVPWCERWGGE-------GGEYGSRSVHCRRREM*LNPAY 134 L A G AC D + A C C G G E G+ C R EM + + Sbjct: 171 LAADGKACEDVDECAAGLAQCAHGCLNTQGSFKCVCHAGYELGADGRQCYRIEMEIVNSC 230 Query: 133 ASRRGGAREGRTNGAEEVSAPCPR 62 + GG G ++ + CPR Sbjct: 231 EANNGGCSHGCSHTSAGPLCTCPR 254
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of| Numb-protein X 4) (SEMACAP3-like protein) Length = 1036 Score = 29.6 bits (65), Expect = 3.2 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 6/53 (11%) Frame = -2 Query: 143 PSVRQPSRGGAR----GEDERSRGGECPLPAAVRSAGSTNGAEGG--GPSRTP 3 P+ R SRGG G + +RGG P P A R G+ G GG G R P Sbjct: 108 PARRLRSRGGCASGLGGGEVPARGGCGPTPRAGRGGGARGGPPGGRWGRGRGP 160
>DHX57_HUMAN (Q6P158) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)| (DEAH box protein 57) Length = 1386 Score = 29.6 bits (65), Expect = 3.2 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = -2 Query: 131 QPSRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGG 18 +P +GG +G RGG + S G G GGG Sbjct: 10 KPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGG 47
>DNJA3_MOUSE (Q99M87) DnaJ homolog subfamily A member 3, mitochondrial precursor| (Tumorous imaginal discs protein Tid56 homolog) (DnaJ protein Tid-1) (mTid-1) Length = 480 Score = 29.6 bits (65), Expect = 3.2 Identities = 22/71 (30%), Positives = 29/71 (40%) Frame = -3 Query: 220 CERWGGEGGEYGSRSVHCRRREM*LNPAYASRRGGAREGRTNGAEEVSAPCPRRCAAQGA 41 CER G+G E G++ HC Y G E G + + C RRC +G+ Sbjct: 236 CERCDGKGNEPGTKVQHCH---------YCG--GSGMETINTGPFVMRSTC-RRCGGRGS 283 Query: 40 RTEQRAVVRRG 8 VV RG Sbjct: 284 IITNPCVVCRG 294
>SALL2_HUMAN (Q9Y467) Sal-like protein 2 (Zinc finger protein SALL2) (HSal2)| Length = 1007 Score = 29.3 bits (64), Expect = 4.2 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = -1 Query: 270 AGIANEVMRRQVCAFRGAS---AGAEREASTVRAASTAGDERCNSTQRT 133 AG +E + + RG S +GAE E TV AA+TAG E ++ + T Sbjct: 784 AGRGSESGGEKAISVRGDSEEASGAEEEVGTVAAAATAGKEMDSNEKTT 832
>ADA2C_RAT (P22086) Alpha-2C adrenergic receptor (Alpha-2C adrenoceptor)| (Alpha-2C adrenoreceptor) (Alpha-2 adrenergic receptor subtype C4) Length = 458 Score = 29.3 bits (64), Expect = 4.2 Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = -3 Query: 133 ASRRGGAR-EGRTNGAEEVSAPCPRRCAAQGARTEQRAVVRRGR 5 A RRGG R EG P P A QGART R+ GR Sbjct: 297 ALRRGGRRREGAEGDTGSADGPGPGLAAEQGARTASRSPGPGGR 340
>ADA2C_MOUSE (Q01337) Alpha-2C adrenergic receptor (Alpha-2C adrenoceptor)| (Alpha-2C adrenoreceptor) (Alpha-2 adrenergic receptor subtype C4) Length = 458 Score = 29.3 bits (64), Expect = 4.2 Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = -3 Query: 133 ASRRGGAR-EGRTNGAEEVSAPCPRRCAAQGARTEQRAVVRRGR 5 A RRGG R EG P P A QGART R+ GR Sbjct: 297 ALRRGGRRREGAEGDTGSADGPGPGLAAEQGARTASRSPGPGGR 340
>DNJA3_HUMAN (Q96EY1) DnaJ homolog subfamily A member 3, mitochondrial precursor| (Tumorous imaginal discs protein Tid56 homolog) (DnaJ protein Tid-1) (hTid-1) Length = 480 Score = 29.3 bits (64), Expect = 4.2 Identities = 22/71 (30%), Positives = 29/71 (40%) Frame = -3 Query: 220 CERWGGEGGEYGSRSVHCRRREM*LNPAYASRRGGAREGRTNGAEEVSAPCPRRCAAQGA 41 CER G+G E G++ HC Y G E G + + C RRC +G+ Sbjct: 236 CERCNGKGNEPGTKVQHCH---------YCG--GSGMETINTGPFVMRSTC-RRCGGRGS 283 Query: 40 RTEQRAVVRRG 8 VV RG Sbjct: 284 IIISPCVVCRG 294
>XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG protein)| Length = 439 Score = 29.3 bits (64), Expect = 4.2 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 12/72 (16%) Frame = -2 Query: 182 AQRPLPETRDVTQPSVRQ---PSRGGARGEDERSRGGECPLPA---------AVRSAGST 39 A P P + P+ + P+ A GE GE P PA A G+ Sbjct: 258 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEGEAPAPAPAEGGAP 317 Query: 38 NGAEGGGPSRTP 3 + AEGG P+ P Sbjct: 318 SPAEGGAPAAAP 329
>CTND2_MOUSE (O35927) Catenin delta-2 (Neural plakophilin-related ARM-repeat| protein) (NPRAP) (Neurojungin) Length = 1247 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = +3 Query: 33 SVRAPCAAHRRGQGALTSSAPFVLPSRAPPRRLAYAGLSYISRLRQWTL--REPYSPPSP 206 S + P + H AL +AP LP+R+ R A S + R L EP PP P Sbjct: 165 SFQYPASYHSNQTLALGDTAPSQLPARSTQARAAGQSFSQGTTGRAGHLAGSEPAPPPPP 224 Query: 207 PQ 212 P+ Sbjct: 225 PR 226
>NOSZ_RALEU (Q59105) Nitrous-oxide reductase precursor (EC 1.7.99.6) (N(2)OR)| (N2O reductase) Length = 643 Score = 28.9 bits (63), Expect = 5.5 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 8/107 (7%) Frame = -3 Query: 313 LGTRPSSLLAAGVACRDRERSDAEAGLCVPWCERWGGEGGEYGS-RSVHCRRREM*LNPA 137 LGT + LA VAC D+ + A A + P G G +G+ SVH + E L+ Sbjct: 21 LGTAALAGLAGVVACTDKGAAPAAAAVGAP---ASGAHGAAHGAGASVHLKPGE--LDTY 75 Query: 136 YASRRGGARE-----GRTNGAEEVSAPC--PRRCAAQGARTEQRAVV 17 Y GG G +G E + PC P G E + V+ Sbjct: 76 YGLWSGGHTGDMRVLGLPSGREILRIPCFVPDALVGWGITNESKKVM 122
>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2| Length = 953 Score = 28.9 bits (63), Expect = 5.5 Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 11/54 (20%) Frame = -2 Query: 146 QPSVRQPSRGGARGEDERSRGGECPLPAAV-----------RSAGSTNGAEGGG 18 QP + SR G ER GG P PA + RS GS NG G G Sbjct: 233 QPRPQGGSRSQQSGGQERQGGGRRPSPAMMPTHPNPGQMPSRSNGSRNGRGGAG 286
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 28.9 bits (63), Expect = 5.5 Identities = 24/72 (33%), Positives = 25/72 (34%) Frame = -3 Query: 226 PWCERWGGEGGEYGSRSVHCRRREM*LNPAYASRRGGAREGRTNGAEEVSAPCPRRCAAQ 47 P ER GG G R RRE R GG EGR E P R A Sbjct: 566 PRTERRGGGERREGGRGFGGERREGGRGFGGERREGGRGEGRRFSGERREGRAPGRDDAS 625 Query: 46 GARTEQRAVVRR 11 R + A RR Sbjct: 626 APRRDDSAGRRR 637
>MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 357 Score = 28.9 bits (63), Expect = 5.5 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +3 Query: 105 PSRAPPRRLAYAGLSYISRLRQWTLREPYSPPSPPQRSHH 224 P AP +L + GLS P SPP+PP+RS H Sbjct: 13 PFNAPHLQLVHDGLS-----------GPRSPPAPPRRSRH 41
>SDK1_CHICK (Q8AV58) Protein sidekick-1 precursor| Length = 2169 Score = 28.9 bits (63), Expect = 5.5 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = +3 Query: 48 CAAHRRGQGALTSSAPFVL----PSRAPPRRLAYAGLSYISRLRQWTLREPYSPPSPPQR 215 CA ++ G+G +S ++ P APP+ + +G + S + QW PP+ Sbjct: 696 CAVNQVGKGQYSSETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQW--------QPPPES 747 Query: 216 SHHG 227 H+G Sbjct: 748 EHNG 751
>HXD3_CHICK (O93353) Homeobox protein Hox-D3| Length = 413 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = +3 Query: 60 RRGQGALTSSAPFVLPSRAPPRRLAYAGLSYISRLRQWTLREPYSPPSPP--QRSHHGTH 233 ++G+G +TSS PSR+P + A Y++ + PY P SPP + H T+ Sbjct: 232 QKGKGMMTSSGG-QSPSRSP---VPPAAGGYLNSMHSLVNSVPYEPQSPPPFNKPHQNTY 287
>HXA3_CHICK (Q7T3J5) Homeobox protein Hox-A3| Length = 413 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = +3 Query: 60 RRGQGALTSSAPFVLPSRAPPRRLAYAGLSYISRLRQWTLREPYSPPSPP--QRSHHGTH 233 ++G+G +TSS PSR+P + A Y++ + PY P SPP + H T+ Sbjct: 232 QKGKGMMTSSGG-QSPSRSP---VPPAAGGYLNSMHSLVNSVPYEPQSPPPFNKPHQNTY 287
>WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family member 3| (WASP-family protein member 3) (WAVE-3 protein) (Verprolin homology domain-containing protein 3) Length = 502 Score = 25.0 bits (53), Expect(2) = 7.1 Identities = 12/30 (40%), Positives = 13/30 (43%) Frame = +2 Query: 44 SLRCAPPRAGGTHLLCSVRPPLSRPPSTAG 133 S APP T LL + PP PP G Sbjct: 377 STHAAPPHPPSTGLLVTAPPPPGPPPPPPG 406 Score = 21.9 bits (45), Expect(2) = 7.1 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +1 Query: 19 PPPSAPFVLPALRTA 63 PPP P V+P+ +TA Sbjct: 344 PPPPPPPVIPSAQTA 358
>NUT1_MAGGR (Q01168) Nitrogen regulatory protein NUT1| Length = 956 Score = 28.5 bits (62), Expect = 7.2 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 152 VTQPSVRQPSRGGARGEDERSRGGECPLPAAVRSAGS 42 +T+ R P R A G D S + PLPA++R S Sbjct: 5 ITEHDFRFPRRPAAPGRDPGSDSSDDPLPASLRELNS 41
>MURG_RALSO (Q8XVI7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 365 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Frame = -1 Query: 270 AGIANEVMRRQ----VCAFRGASAGAEREASTVRA 178 AG+AN V+ R +CAF GA GAE + +RA Sbjct: 135 AGLANRVLARVADRVLCAFPGALPGAEWVGNPIRA 169
>PRTC_STRGR (P52320) Serine protease C precursor (EC 3.4.21.-) (SGPC)| Length = 457 Score = 28.5 bits (62), Expect = 7.2 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -1 Query: 273 PAGIANEVMRRQVCAFRGASAGAEREASTVRAASTAGDERCNS 145 P G + V R VCA G S G+ S + ++ G C+S Sbjct: 328 PEGTISGVTRTSVCAEPGDSGGSYISGSQAQGVTSGGSGNCSS 370
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 28.5 bits (62), Expect = 7.2 Identities = 19/57 (33%), Positives = 22/57 (38%) Frame = -2 Query: 173 PLPETRDVTQPSVRQPSRGGARGEDERSRGGECPLPAAVRSAGSTNGAEGGGPSRTP 3 P R +PS +P GG RG +RG P R G GA G R P Sbjct: 480 PYGAARPAGRPSGGRPGPGGNRGPASANRGPGGP-GGGARGPGGPGGAPRGPGGRPP 535
>SEF1_ASHGO (Q74Z37) Suppressor protein SEF1 homolog| Length = 1051 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/47 (40%), Positives = 25/47 (53%) Frame = -2 Query: 170 LPETRDVTQPSVRQPSRGGARGEDERSRGGECPLPAAVRSAGSTNGA 30 +P + Q Q S+GG +GE RS G PL A + + GS NGA Sbjct: 796 VPTKNAILQAKKLQRSQGGQKGEPIRSING-IPL-AMLDATGSVNGA 840
>MI43_MYCIT (Q03490) 27 kDa lipoprotein antigen precursor (Mi43 antigen)| Length = 262 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 10/61 (16%) Frame = -2 Query: 155 DVTQPS--VRQPSRGGARGED--------ERSRGGECPLPAAVRSAGSTNGAEGGGPSRT 6 DVTQ S + +P+ G A G+ S G CP P G+++ G PS Sbjct: 106 DVTQGSCLIVKPTEGSAPGQPVTAAKVKISESVNGTCPKPHESTPGGASSTPPSGSPSPA 165 Query: 5 P 3 P Sbjct: 166 P 166
>FTR_RHOBA (Q7UKZ8) Formylmethanofuran--tetrahydromethanopterin| formyltransferase (EC 2.3.1.101) (H4MPT formyltransferase) Length = 334 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -3 Query: 295 SLLAAGVACRDRERS-DAEAGLCVPWCERWGGEGGEYGSRSVHCRR 161 ++LA G++ +D E+ AG CV C GG G R VH +R Sbjct: 83 AILAFGMSGKDLEKQIPRRAGQCVLTCPTTALYGGIPGGREVHPKR 128 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,438,805 Number of Sequences: 219361 Number of extensions: 1119153 Number of successful extensions: 4746 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4348 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4736 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)