>YIS7_YEAST (P40566) Hypothetical 87.0 kDa protein in PAN1-PRI1 intergenic|
           region
          Length = 764

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 127 PAISGPDSRRAAGAPHCTLK---AGLLYIKIIIRPYMIRNHG 243
           P+   PD+     +P CTLK   +G   +  I+RP+ I+ HG
Sbjct: 621 PSFIKPDNHLDLDSPSCTLKSDLSGFRALDAIMRPFPIQIHG 662

>PYRF_CHRVO (Q7NTL2) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP|
           decarboxylase) (OMPDCase) (OMPdecase)
          Length = 247

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
 Frame = +2

Query: 266 KAALDAGAWMFNVVTSVGIIMVNKALMATHGFS------FATTLTGMHSA 397
           KAA ++G WM NV  S G  M+  A  A  G+S        T LT M ++
Sbjct: 85  KAAAESGVWMVNVHASGGRRMMEAAREALAGYSQRPLLIAVTVLTSMEAS 134

>ZN416_HUMAN (Q9BWM5) Zinc finger protein 416|
          Length = 594

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -1

Query: 412 HQSGSCRMHPSQCGGKAKTMCSH*GLVDHDYANRSYNIEHPCPSIQC 272
           HQ       P +CG   K+   H GL+ H    +S+ +E P  S +C
Sbjct: 540 HQVVHTGERPYECGKCGKSFTQHSGLILH---RKSHTVERPRDSSKC 583

>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
 Frame = +1

Query: 127 PAISGPDSRRAAGAPHCTLKAGLLYIKII-IRPYMIRNHGTRKQGREKSSIGCWGMDVQC 303
           P  +GP  RR AG P   L   LL + ++ + P  +       +GR        G  V  
Sbjct: 6   PRGAGPARRRGAGGPPSPLLPSLLLLLLLWMLPDTVAPQELNPRGRNVCRAP--GSQVPT 63

Query: 304 CNFGWHNHGQQ 336
           C  GW   G +
Sbjct: 64  CCAGWRQQGDE 74

>PYRF_BUCAI (P57358) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP|
           decarboxylase) (OMPDCase) (OMPdecase)
          Length = 236

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +2

Query: 266 KAALDAGAWMFNVVTSVGIIMVNKALMATHGFSFATTLTGMHSATTTLMTLVMKWLG 436
           KAA D G WM +V  S G  M+  A  A   F  A  L  + +A T+     +K +G
Sbjct: 81  KAAADLGIWMLSVHASGGKEMLISAKKALKSFKKAPLLIAV-TALTSFKEEALKEIG 136


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,748,130
Number of Sequences: 219361
Number of extensions: 979888
Number of successful extensions: 2685
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2685
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)