>GOGA5_XENLA (Q6GNT7) Golgin subfamily A member 5 (Golgin-84)|
          Length = 722

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 221 TWELDDAKHELQKEREEKHRMAGCIQSLQQEL 316
           T EL++ +HE   +REE  ++ G IQ L+ EL
Sbjct: 456 TMELEEMRHERDMQREEIQKLMGQIQQLKAEL 487

>GCH1_RAT (P22288) GTP cyclohydrolase I precursor (EC 3.5.4.16) (GTP-CH-I)|
          Length = 241

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 31  LRREGARRGAPVSRPPRCQRRQSAAAWSDGSAKT 132
           L R GA R A  SRPP  +  Q A AW  G  ++
Sbjct: 18  LPRPGASRPAEKSRPPEAKGAQPADAWKAGRPRS 51

>GOGA5_HUMAN (Q8TBA6) Golgin subfamily A member 5 (Golgin-84) (RET-fused gene 5|
           protein) (Ret-II protein)
          Length = 731

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 227 ELDDAKHELQKEREEKHRMAGCIQSLQQEL 316
           EL++ +HE + +REE  ++ G I  L+ EL
Sbjct: 467 ELEELRHEKEMQREEIQKLMGQIHQLRSEL 496

>GCC1_MOUSE (Q9D4H2) GRIP and coiled-coil domain-containing protein 1 (Golgi|
           coiled coil protein 1)
          Length = 778

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +2

Query: 221 TWELDDAKHELQKEREEKHRMAGCIQSLQQE 313
           T E+++ K ELQ  R+EK+R    +Q LQQE
Sbjct: 296 TREVEELKGELQTIRDEKNRPDPRLQELQQE 326

>GOGA5_BRARE (Q7SXE4) Golgin subfamily A member 5 (Golgin-84)|
          Length = 760

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 227 ELDDAKHELQKEREEKHRMAGCIQSLQQEL 316
           EL++ +HE + +REE  ++   IQSL+ E+
Sbjct: 497 ELEELRHEKELQREEIQKLQAQIQSLRTEI 526

>MEFV_HUMAN (O15553) Pyrin (Marenostrin)|
          Length = 781

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 16  GGCPALRREGARRGAPVSRPPRCQRRQSAAAWSDGSAKTRCSPPS 150
           GG  +LR      G  +SR P  +RR+ A+   D   K R   P+
Sbjct: 137 GGAASLRCSQPEAGRGLSRKPLSKRREKASEGLDAQGKPRTRSPA 181

>RS3_BURPS (Q63Q17) 30S ribosomal protein S3|
          Length = 266

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +1

Query: 10  GEGGCPALRREGARRGA 60
           GEGG P  RR G RRGA
Sbjct: 240 GEGGAPGARRGGPRRGA 256

>RS3_BURP1 (Q3JMR9) 30S ribosomal protein S3|
          Length = 266

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +1

Query: 10  GEGGCPALRREGARRGA 60
           GEGG P  RR G RRGA
Sbjct: 240 GEGGAPGARRGGPRRGA 256

>RS3_BURMA (Q62GL1) 30S ribosomal protein S3|
          Length = 266

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +1

Query: 10  GEGGCPALRREGARRGA 60
           GEGG P  RR G RRGA
Sbjct: 240 GEGGAPGARRGGPRRGA 256

>GOGA5_RAT (Q3ZU82) Golgin subfamily A member 5 (Golgin-84)|
          Length = 728

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +2

Query: 227 ELDDAKHELQKEREEKHRMAGCIQSLQQEL 316
           EL++ +HE + ++EE  ++ G I  L+ EL
Sbjct: 464 ELEELRHERELQKEEIQKLMGQIHQLRSEL 493

>HEM1_METKA (Q9UXR8) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 404

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +2

Query: 5   KSVKEAVPLFGERVLAGELLFHAPRDANAANQLLHGVTAAPRPVVH 142
           ++V+ A  L GE V   EL+ H  R     + ++   TAAP PV+H
Sbjct: 203 RAVELARDLGGEAVRFDELVDHLAR-----SDVVVSATAAPHPVIH 243

>CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5) (Cholinesterase-related
           cell division controller)
          Length = 1512

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = +1

Query: 1   GQVGEGGCPALRREGARRGAPVSRPPRCQRRQSA 102
           G  G GG PA      RRG    R PR  RR S+
Sbjct: 173 GTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSS 206


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,808,559
Number of Sequences: 219361
Number of extensions: 398408
Number of successful extensions: 2298
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2294
length of database: 80,573,946
effective HSP length: 81
effective length of database: 62,805,705
effective search space used: 1507336920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)