Clone Name | bart51f07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GRASP_HUMAN (Q7Z6J2) General receptor for phosphoinositides 1-as... | 29 | 3.1 | 2 | DCNL4_MOUSE (Q8CCA0) DCN1-like protein 4 (Defective in cullin ne... | 29 | 4.1 | 3 | DCNL4_HUMAN (Q92564) DCN1-like protein 4 (Defective in cullin ne... | 28 | 7.0 |
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>GRASP_HUMAN (Q7Z6J2) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) Length = 395 Score = 29.3 bits (64), Expect = 3.1 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -3 Query: 91 GGDRHARGDVASCCSSTCFSHRSVSPSLP 5 GG R ARGD TCF S P+LP Sbjct: 271 GGARRARGDADDAVYHTCFFGDSEPPALP 299
>DCNL4_MOUSE (Q8CCA0) DCN1-like protein 4 (Defective in cullin neddylation| protein 1-like protein 4) (DCUN1 domain-containing protein 4) Length = 292 Score = 28.9 bits (63), Expect = 4.1 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 100 QELGGDRHARGDVASCCSSTCFS 32 +++G D H G + SC SS CFS Sbjct: 36 EDVGQDDHQTGSLRSCSSSDCFS 58
>DCNL4_HUMAN (Q92564) DCN1-like protein 4 (Defective in cullin neddylation| protein 1-like protein 4) (DCUN1 domain-containing protein 4) Length = 292 Score = 28.1 bits (61), Expect = 7.0 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3 Query: 100 QELGGDRHARGDVASCCSSTCFS 32 +++G D H G + SC SS CF+ Sbjct: 36 EDIGQDDHQTGSLRSCSSSDCFN 58 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,515,153 Number of Sequences: 219361 Number of extensions: 249671 Number of successful extensions: 1192 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1192 length of database: 80,573,946 effective HSP length: 24 effective length of database: 75,309,282 effective search space used: 1807422768 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)