ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart51f04 |
|---|---|
| Clone Library Name | barley_pub |
>S35B2_DROME (Q9VEI3) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) (Protein slalom) Length = 465 Score = 45.1 bits (105), Expect = 7e-05 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 3/94 (3%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTK---RFGPEERRFDHLAFLNFAQNVVCFVWSFIMIK 312 L +C GG+ SY+T G+LQE + T+ F E +F FL F+ ++ F+ + ++ Sbjct: 145 LLWCFGGLMISYLTWGVLQEKIMTQNYLNFTGESAKFKDSQFLVFSNRLLAFLVALAYLQ 204 Query: 313 LWSGGSSPAGRAPLLKYWGVSITNTIGPDMGIEA 414 W S RAPL KY S +N + EA Sbjct: 205 -WQ-PSPVRHRAPLYKYSYASFSNIMSAWFQYEA 236
>HUT1_EMENI (Q5B5W2) UDP-galactose transporter homolog 1| Length = 424 Score = 41.2 bits (95), Expect = 0.001 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 10/66 (15%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRF----------GPEERRFDHLAFLNFAQNVVCFV 291 LAFCV GI++S+++ G+LQE ++T + PE+ RF LN Q+ V Sbjct: 60 LAFCVAGIYASFLSWGVLQEAITTVSYPVHPPTAAEPEPEKERFTFSIVLNTIQSTFAAV 119 Query: 292 WSFIMI 309 F+ + Sbjct: 120 TGFLYL 125
>HUT1_YARLI (Q6C4X5) UDP-galactose transporter homolog 1| Length = 365 Score = 38.9 bits (89), Expect = 0.005 Identities = 16/45 (35%), Positives = 28/45 (62%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRFGPEERRFDHLAFLNFAQN 276 L CV GI++S++T +LQE ++T +GP+ + F +N Q+ Sbjct: 45 LIICVSGIYASFLTWAVLQERIATTPYGPDNKIFRASLVINTVQS 89
>HUT1_ASPFU (Q4WJM7) UDP-galactose transporter homolog 1| Length = 415 Score = 38.9 bits (89), Expect = 0.005 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 10/78 (12%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRF----------GPEERRFDHLAFLNFAQNVVCFV 291 LA CV GI++S+++ G+LQE ++T F P RF LN Q+ + Sbjct: 48 LAICVLGIYASFLSWGVLQEAITTVNFPVRPPTAEEPNPPTERFTFSIVLNTIQSTFAAI 107 Query: 292 WSFIMIKLWSGGSSPAGR 345 F+ + S+PAG+ Sbjct: 108 TGFLYLYF----STPAGK 121
>S35B2_PONPY (Q5R9A1) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) (Solute carrier family 35 member B2) Length = 432 Score = 38.5 bits (88), Expect = 0.006 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRFGPEE----RRFDHLAFLNFAQNVVCFVWSFIMI 309 L FC G+ SY+T G+LQE + T+ +G RF FL V+ + + + Sbjct: 112 LLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGLSC 171 Query: 310 KLWSGGSSPAGRAPLLKYWGVSITNTI 390 L P AP+ +Y S++N + Sbjct: 172 VLC---KQPRHGAPMYRYSFASLSNVL 195
>S35B2_HUMAN (Q8TB61) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) (Solute carrier family 35 member B2) (Putative MAPK-activating protein PM15) (Putative NF-kappa-B-activating protein 48) Length = 432 Score = 38.5 bits (88), Expect = 0.006 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRFGPEE----RRFDHLAFLNFAQNVVCFVWSFIMI 309 L FC G+ SY+T G+LQE + T+ +G RF FL V+ + + + Sbjct: 112 LLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGLSC 171 Query: 310 KLWSGGSSPAGRAPLLKYWGVSITNTI 390 L P AP+ +Y S++N + Sbjct: 172 VLC---KQPRHGAPMYRYSFASLSNVL 195
>HUT1_CANAL (Q5ADN8) UDP-galactose transporter homolog 1| Length = 370 Score = 37.7 bits (86), Expect = 0.011 Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Frame = +1 Query: 127 SRVAVLAFCVGGIWSSYITQGILQETLSTKRFGPEERRFDHLAFLNFAQ----NVVCFVW 294 ++ L CV G++ +++T ILQE ++TK +G F +N Q +++ F++ Sbjct: 20 NKALTLIICVCGLYGTFLTWSILQERINTKPYGDNNEYFKAPIIINLIQALFASIIGFIY 79 Query: 295 SFI 303 +++ Sbjct: 80 NYV 82
>S35B2_MOUSE (Q91ZN5) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) (Solute carrier family 35 member B2) Length = 431 Score = 37.7 bits (86), Expect = 0.011 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 4/91 (4%) Frame = +1 Query: 130 RVAVLAFCVGGIWSSYITQGILQETLSTKRFGPEE----RRFDHLAFLNFAQNVVCFVWS 297 +V L FC G+ SY+T GILQE + T +G F FL V+ V + Sbjct: 108 QVLKLVFCASGLQVSYLTWGILQERVMTGSYGATATSPGEHFTDSQFLVLMNRVLALVVA 167 Query: 298 FIMIKLWSGGSSPAGRAPLLKYWGVSITNTI 390 + L P AP+ +Y S++N + Sbjct: 168 GLYCVL---RKQPRHGAPMYRYSFASLSNVL 195
>HUT1_ASHGO (Q755H7) UDP-galactose transporter homolog 1| Length = 324 Score = 36.6 bits (83), Expect = 0.023 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 4/87 (4%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRFGPEERRFDHLAFLNFAQNVVCFVWSFIMIKLWS 321 L V GI+++++T + QE L+T + RF H +F+ Q + V +K Sbjct: 7 LVIAVCGIYATFLTWSLAQEPLTTSVWPNSAARFSHSSFIVLCQALTAAVVGLCYLKAQR 66 Query: 322 GGSSPAGRAPLLKYW----GVSITNTI 390 G R + K+W G+S+T+ + Sbjct: 67 SGY--GAREFIRKHWADVAGISLTHAL 91
>HUT1_DEBHA (Q6BMV3) UDP-galactose transporter homolog 1| Length = 354 Score = 34.7 bits (78), Expect = 0.089 Identities = 13/31 (41%), Positives = 23/31 (74%) Frame = +1 Query: 133 VAVLAFCVGGIWSSYITQGILQETLSTKRFG 225 + LA C+ G+++S++T +LQE +STK +G Sbjct: 9 IITLAACILGLYASFLTWSVLQERISTKPYG 39
>S35B1_XENLA (Q6GQ70) Solute carrier family 35 member B1 (Endoplasmic reticulum| nucleotide sugar transporter 1) Length = 320 Score = 34.7 bits (78), Expect = 0.089 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 7/88 (7%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRFGPEER--RFDHLAFLNFAQNVVCFVWSFIMIKL 315 L C G++ Y GILQET++ + +G E+ +F L F Q +V +++ ++I+ Sbjct: 12 LLVCFLGVFVCYFYYGILQETITRRTYGEGEKQEKFRFALSLVFVQCIVNALFAKLLIQC 71 Query: 316 WSGGSSPAGRAPL-----LKYWGVSITN 384 + G + ++ L L Y G +++ Sbjct: 72 FDSGKTDRTQSWLYSACSLSYLGAMVSS 99
>S35B1_XENTR (Q8AXS6) Solute carrier family 35 member B1| Length = 323 Score = 33.9 bits (76), Expect = 0.15 Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 7/90 (7%) Frame = +1 Query: 136 AVLAFCVGGIWSSYITQGILQETLSTKRFGPEER--RFDHLAFLNFAQNVVCFVWSFIMI 309 A L C G++ Y GILQET++ +G E+ +F L F Q +V +++ ++I Sbjct: 12 ARLLVCFLGVFVCYFYYGILQETITRGTYGEGEKQEKFRFALSLVFVQCIVNALFAKLLI 71 Query: 310 KLWSGGSSPAGRAPL-----LKYWGVSITN 384 + + G + ++ L L Y G +++ Sbjct: 72 QFFDSGKTDRTQSWLYAACSLSYLGAMVSS 101
>HUT1_KLULA (Q6CR04) UDP-galactose transporter homolog 1| Length = 339 Score = 33.9 bits (76), Expect = 0.15 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 Query: 148 FCVGGIWSSYITQGILQETLSTKRFGPEERRFDHLAFLNFAQNVVCFVWSFIMIK 312 F VGGI+ S++T G+LQE L+T+ + F + Q + + I IK Sbjct: 10 FAVGGIYCSFLTWGLLQEPLNTRVWPNSGCTFQVPYIVALVQATIAMICGLIYIK 64
>HUT1_CANGA (Q6FSF8) UDP-galactose transporter homolog 1| Length = 362 Score = 31.6 bits (70), Expect = 0.76 Identities = 12/32 (37%), Positives = 22/32 (68%) Frame = +1 Query: 148 FCVGGIWSSYITQGILQETLSTKRFGPEERRF 243 FC GI++S++T ++QE L+T+ + +RF Sbjct: 12 FCAAGIYASFLTWALVQEPLTTQVWENSHKRF 43
>S35B1_BRARE (Q66HX0) Solute carrier family 35 member B1| Length = 329 Score = 31.6 bits (70), Expect = 0.76 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 7/87 (8%) Frame = +1 Query: 145 AFCVGGIWSSYITQGILQETLSTKRF--GPEERRFDHLAFLNFAQNVVCFVWSFIMIKLW 318 A C G++ Y GILQET++ + ++ +F + L F Q ++ ++ ++I+ + Sbjct: 21 AVCFCGVFVCYFYYGILQETITRADYTHAGKKEKFRYATTLVFIQCIINAAFARLLIQFF 80 Query: 319 SGGSSPAGRAPL-----LKYWGVSITN 384 G R+ L L Y G +++ Sbjct: 81 EGSKQDHTRSWLYGLCSLSYLGAMVSS 107
>HUT1_SCHPO (Q8WZJ9) UDP-galactose transporter homolog 1| Length = 322 Score = 30.8 bits (68), Expect = 1.3 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%) Frame = +1 Query: 121 LASRVAVLAFCVGGIWSSYITQGILQETLSTKRFGPEERRFDHLAFLNFAQN---VVC-F 288 +A + L C+ GI+ S+++ ++QE + T+ + E RF A L+ AQ+ V+C Sbjct: 1 MAGFMRQLFVCMIGIYGSFLSWAVMQEKIITRPYDGE--RFSSPALLSLAQSFMTVLCGL 58 Query: 289 VWSFIMIKLWSGGSSPAG 342 +W+ W G S G Sbjct: 59 LWN------WFHGVSARG 70
>UDB16_RABIT (O19103) UDP-glucuronosyltransferase 2B16 precursor (EC 2.4.1.17)| (UDPGT) (Fragment) Length = 523 Score = 30.8 bits (68), Expect = 1.3 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -3 Query: 401 MSGPMVL-VMLTPQYFRRGARPAGLLPPDHSLIIMKDQTKQTTFCAKLRNARW 246 ++ P+V V TP Y L PP + +IM D + Q TF +++N W Sbjct: 158 LNRPLVYSVRFTPGYTYEKYSGGLLFPPSYVPVIMSDLSGQMTFMERVKNMLW 210
>YDBH_SCHPO (Q10367) Hypothetical protein C22E12.17c in chromosome I| Length = 486 Score = 28.9 bits (63), Expect = 4.9 Identities = 11/47 (23%), Positives = 26/47 (55%) Frame = +1 Query: 247 HLAFLNFAQNVVCFVWSFIMIKLWSGGSSPAGRAPLLKYWGVSITNT 387 H++F+ F ++ V W++ +++ G + R ++ GVS+ N+ Sbjct: 57 HISFVRFLRSTVLDSWTYAQLRVMRVGGNENARNYFKRHGGVSLLNS 103
>NORB_PSEAE (Q59647) Nitric-oxide reductase subunit B (EC 1.7.99.7) (Nitric| oxide reductase cytochrome b subunit) (NOR large subunit) Length = 466 Score = 28.1 bits (61), Expect = 8.3 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 8/90 (8%) Frame = +1 Query: 124 ASRVAVLAFCVGGIWS--------SYITQGILQETLSTKRFGPEERRFDHLAFLNFAQNV 279 A V+AF G+W +Y T G T T G H+AF + Sbjct: 312 AMGTTVMAFLGAGVWGFMHTLAPVNYYTHG----TQLTAAHG-------HMAFYGAYAMI 360 Query: 280 VCFVWSFIMIKLWSGGSSPAGRAPLLKYWG 369 V + S+ M +L G + R+ +L+ WG Sbjct: 361 VMTIISYAMPRLRGIGEAMDNRSQVLEMWG 390 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,068,558 Number of Sequences: 219361 Number of extensions: 593638 Number of successful extensions: 1603 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1518 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1603 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
