Clone Name | bart51f01 |
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Clone Library Name | barley_pub |
>WRK13_ARATH (Q9SVB7) Probable WRKY transcription factor 13 (WRKY DNA-binding| protein 13) Length = 304 Score = 28.9 bits (63), Expect = 3.4 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = -3 Query: 200 QRHLSRPWTWPCQRG 156 QR LS PW W CQ G Sbjct: 122 QRPLSNPWAWSCQAG 136
>CI025_BRARE (Q6DC60) Protein C9orf25 homolog| Length = 186 Score = 28.5 bits (62), Expect = 4.4 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -2 Query: 303 MTVIPPRGILDTCRACSATQSTS 235 + +IPP+ + TC C AT ST+ Sbjct: 160 LDLIPPKSVNPTCMCCQATSSTA 182
>CI025_MOUSE (Q9D772) Protein C9orf25 homolog| Length = 157 Score = 28.5 bits (62), Expect = 4.4 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -2 Query: 303 MTVIPPRGILDTCRACSATQSTS 235 + +IPP+ + TC C AT ST+ Sbjct: 131 LDLIPPKSVNPTCMCCQATSSTA 153
>CI025_HUMAN (Q8IW50) Protein C9orf25| Length = 157 Score = 28.5 bits (62), Expect = 4.4 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -2 Query: 303 MTVIPPRGILDTCRACSATQSTS 235 + +IPP+ + TC C AT ST+ Sbjct: 131 LDLIPPKSVNPTCMCCQATSSTA 153
>APC_XENLA (P70039) Adenomatous polyposis coli homolog (Protein APC)| Length = 2829 Score = 28.1 bits (61), Expect = 5.7 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = -3 Query: 278 SSTPVGRARRPSRHRTGASAARRMKPQRHLSRPWTWPCQRGRRPG 144 SSTP G ++ SR + SA+ R PQ LSRP P + PG Sbjct: 2287 SSTPGGSSKGNSRSGSRDSASSRPSPQ-PLSRPLQSPGRNSISPG 2330
>MRP2_ARATH (Q42093) Multidrug resistance-associated protein 2 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 2) (ATP-energized glutathione S-conjugate pump 2) Length = 1623 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +2 Query: 98 LLPTPPTDSGEPACSLR 148 LLP PP + GEPA S+R Sbjct: 601 LLPNPPIEPGEPAISIR 617
>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (hDomino) (CAG repeat protein 32) (Trinucleotide repeat-containing gene 12 protein) Length = 3160 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 8/36 (22%) Frame = -3 Query: 275 STPVGRARRP--------SRHRTGASAARRMKPQRH 192 +TP+ A+ P RH+T SAA R K QRH Sbjct: 2272 ATPIPEAKLPPVYVRKERKRHKTDPSAAGRKKKQRH 2307
>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21| Length = 348 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = -3 Query: 296 SFLQGASSTPVGRARRPSRHRTGASAARRMKPQRHLSRPWTWPCQRGRRPGG 141 S + + S R+R PSR + S + +P+RH S P RRP G Sbjct: 296 SHSRSSRSRSPSRSRSPSRCASSRSRSPAHRPRRHSSSRVNPPGPPPRRPAG 347
>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4| (KAISO-like zinc finger protein 1) (KAISO-L1) Length = 1013 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Frame = -3 Query: 281 ASSTPVGRARRPSRHRTGASA-----ARRMKPQRHLSRPWTWPCQRGRRP 147 A+ +P GRAR RHR G A R+++ + + + GRRP Sbjct: 712 AAESPAGRARTERRHRCGDCAQTFTTLRKLRKHQEAHGGGSHSSRAGRRP 761
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -2 Query: 78 SEETLSFPTTSPTCDRRTPEEGTPSS 1 +E T PT++PT D TP E T ++ Sbjct: 380 AESTTEAPTSTPTTDTTTPSEATTAT 405
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -2 Query: 78 SEETLSFPTTSPTCDRRTPEEGTPSS 1 +E T PT++PT D TP E T ++ Sbjct: 311 AESTTEAPTSTPTTDTTTPSEATTAT 336
>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (mDomino) Length = 3072 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 8/36 (22%) Frame = -3 Query: 275 STPVGRARRP--------SRHRTGASAARRMKPQRH 192 +TP+ A+ P RH+T SAA R K QRH Sbjct: 2188 TTPIPEAKLPPVYVRKERKRHKTDPSAAGRKKKQRH 2223
>GPR37_HUMAN (O15354) Probable G-protein coupled receptor 37 precursor| (Endothelin B receptor-like protein 1) (ETBR-LP-1) (Parkin-associated endothelin receptor-like receptor) (PAELR) Length = 613 Score = 27.3 bits (59), Expect = 9.8 Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Frame = -3 Query: 296 SFLQGAS-STPVGRARRPSRHRTG-ASAARRMKPQRHLSRPWTWPCQRGRRP 147 +FL G S P R P+ R ASAA P PW W RG+ P Sbjct: 79 AFLAGPSWDLPAAPGRDPAAGRGAEASAAGPPGPPTRPPGPWRWKGARGQEP 130 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,979,460 Number of Sequences: 219361 Number of extensions: 656952 Number of successful extensions: 2066 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2017 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2066 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)