ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart51e12 |
|---|---|
| Clone Library Name | barley_pub |
>AP23_ARATH (P42736) AP2 domain transcription factor RAP2.3 (Related to AP2| protein 3) (Cadmium-induced protein AS30) Length = 248 Score = 38.5 bits (88), Expect = 0.008 Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 3/114 (2%) Frame = +1 Query: 121 MCGGAILAE---LIPGAPARRVTPGHIWPGKGAKQAKPXXXXXXXXXXXXXXXXXXXXXX 291 MCGGAI+++ L+ A R++T +W A A Sbjct: 1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPT--------- 51 Query: 292 XXXXXXXXXXXXSKPFVFAASPKKQLRQEEAAPSRSRKPSQYRGVRRRPWGKWA 453 ++ V + KK+ E R ++ + YRG+R+RPWGKWA Sbjct: 52 ------------NQVNVKEEAVKKEQATEPG--KRRKRKNVYRGIRKRPWGKWA 91
>ERF5_NICSY (Q9LW48) Ethylene-responsive transcription factor 5| (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) Length = 282 Score = 36.6 bits (83), Expect = 0.030 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%) Frame = +1 Query: 331 KPFVFAASPKKQ--LRQEEAAPSRSRKPSQYRGVRRRPWGKWA 453 KP + A P KQ +++ E AP+ + YRGVR+RPWGK+A Sbjct: 111 KPSLNIAIPVKQEVVQKVELAPTEKK---HYRGVRQRPWGKFA 150
>ERF1_TOBAC (Q40476) Ethylene-responsive transcription factor 1| (Ethylene-responsive element-binding factor 1) (EREBP-1) (NtERF1) Length = 236 Score = 36.2 bits (82), Expect = 0.039 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 11/51 (21%) Frame = +1 Query: 334 PFVFAASPKKQLRQEE----------AAPSRSR-KPSQYRGVRRRPWGKWA 453 PF F+A K ++EE AAP+ + YRGVRRRPWGK+A Sbjct: 67 PFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFA 117
>ERF5_TOBAC (Q40478) Ethylene-responsive transcription factor 5| (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) Length = 291 Score = 35.4 bits (80), Expect = 0.067 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Frame = +1 Query: 331 KPFVFAASPKKQ---LRQEEAAPSRSRKPSQYRGVRRRPWGKWA 453 KP + A P KQ +++ E P+ + YRGVR+RPWGK+A Sbjct: 117 KPSLNIAIPMKQQEVVQKVEVVPTEKK---HYRGVRQRPWGKFA 157
>ERF1A_ARATH (O80337) Ethylene-responsive transcription factor 1A| (Ethylene-responsive element-binding factor 1A) (EREBP-1A) (AtERF1) Length = 268 Score = 35.4 bits (80), Expect = 0.067 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 4/44 (9%) Frame = +1 Query: 334 PFVFAASPKKQLRQEEAAPSRSR----KPSQYRGVRRRPWGKWA 453 P FAA +++E+ +P + K YRGVR+RPWGK+A Sbjct: 117 PESFAAVDSVPVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFA 160
>ERF13_ARATH (Q8L9K1) Ethylene-responsive transcription factor 13| (Ethylene-responsive element-binding factor 13) (EREBP-13) (AtERF13) Length = 226 Score = 35.0 bits (79), Expect = 0.088 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = +1 Query: 400 RKPSQYRGVRRRPWGKWA 453 +K QYRGVRRRPWGK+A Sbjct: 87 QKGMQYRGVRRRPWGKFA 104
>ERF2_ARATH (O80338) Ethylene-responsive transcription factor 2| (Ethylene-responsive element-binding factor 2) (EREBP-2) (AtERF2) Length = 243 Score = 33.9 bits (76), Expect = 0.20 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = +1 Query: 355 PKKQLRQEEAAPSRSRKPSQYRGVRRRPWGKWA 453 PKK + E A K YRGVR+RPWGK+A Sbjct: 101 PKKAIPVTETAV----KAKHYRGVRQRPWGKFA 129
>TINY_ARATH (Q39127) Transcriptional factor TINY| Length = 218 Score = 33.1 bits (74), Expect = 0.33 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%) Frame = +1 Query: 346 AASPKKQLRQEEAAPSR-SRKPSQYRGVRRRPWGKW 450 A++ +++ +E+ P + S K YRGVR+R WGKW Sbjct: 12 ASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKW 47
>ERF1B_ARATH (Q8LDC8) Ethylene-responsive transcription factor 1B| (Ethylene-responsive element-binding factor 1B) (EREBP-1B) (AtERF1) Length = 218 Score = 33.1 bits (74), Expect = 0.33 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +1 Query: 391 SRSRKPSQYRGVRRRPWGKWA 453 S + YRGVRRRPWGK+A Sbjct: 74 SSRKSEKSYRGVRRRPWGKFA 94
>ERF5_ARATH (O80341) Ethylene-responsive transcription factor 5| (Ethylene-responsive element-binding factor 5) (EREBP-5) (AtERF5) Length = 300 Score = 33.1 bits (74), Expect = 0.33 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 Query: 370 RQEEAAPSRSRKPSQYRGVRRRPWGKWA 453 + E P + YRGVR+RPWGK+A Sbjct: 141 KPEVTKPVSEEEKKHYRGVRQRPWGKFA 168
>PTI6_LYCES (O04682) Pathogenesis-related genes transcriptional activator PTI6| (PTO-interacting protein 6) Length = 248 Score = 32.7 bits (73), Expect = 0.44 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +1 Query: 370 RQEEAAPSRSRKPSQYRGVRRRPWGKWA 453 R+ + S + ++RGVR+RPWG+WA Sbjct: 83 RRSVSPDSDVTRRKKFRGVRQRPWGRWA 110
>ERF8_ARATH (Q9MAI5) Ethylene-responsive transcription factor 8| (Ethylene-responsive element-binding factor 8) (EREBP-8) (AtERF8) Length = 185 Score = 32.7 bits (73), Expect = 0.44 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 Query: 391 SRSRKPSQYRGVRRRPWGKWA 453 S + K +YRGVR+RPWG++A Sbjct: 23 SNAAKEIRYRGVRKRPWGRYA 43
>ERF14_ARATH (P93822) Ethylene-responsive transcription factor 14| (Ethylene-responsive element-binding factor 14) (EREBP-14) (AtERF14) Length = 133 Score = 32.7 bits (73), Expect = 0.44 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = +1 Query: 412 QYRGVRRRPWGKWA 453 +YRGVRRRPWGK+A Sbjct: 19 KYRGVRRRPWGKYA 32
>PTI5_LYCES (O04681) Pathogenesis-related genes transcriptional activator PTI5| (PTO-interacting protein 5) Length = 161 Score = 32.7 bits (73), Expect = 0.44 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = +1 Query: 412 QYRGVRRRPWGKWA 453 +YRGVRRRPWGK+A Sbjct: 58 KYRGVRRRPWGKYA 71
>ERF10_ARATH (Q9ZWA2) Ethylene-responsive transcription factor 10| (Ethylene-responsive element-binding factor 10) (EREBP-10) (AtERF10) Length = 245 Score = 32.3 bits (72), Expect = 0.57 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +1 Query: 403 KPSQYRGVRRRPWGKWA 453 K +YRGVRRRPWG++A Sbjct: 49 KEVRYRGVRRRPWGRYA 65
>ERF2_NICSY (Q9LW50) Ethylene-responsive transcription factor 2| (Ethylene-responsive element-binding factor 2) (EREBP-2) (NsERF2) Length = 237 Score = 32.3 bits (72), Expect = 0.57 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 18/58 (31%) Frame = +1 Query: 334 PFVFAASPKKQLRQEEAAPSRSRKPS------------------QYRGVRRRPWGKWA 453 PF ++ K +EE P+ S PS YRGVR+RPWGK+A Sbjct: 58 PFNLTSTEIKAEPREEIEPATSPVPSVAPPAETTTAQAVVPKGRHYRGVRQRPWGKFA 115
>ERF2_TOBAC (Q40479) Ethylene-responsive transcription factor 2| (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) Length = 233 Score = 31.6 bits (70), Expect = 0.97 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +1 Query: 334 PFVFAASPKKQLRQEEAAPSRSRKPSQYRGVRRRPWGKWA 453 P A P + + P K YRGVR+RPWGK+A Sbjct: 76 PVPSVAPPAETTTAQAVVP----KGRHYRGVRQRPWGKFA 111
>ERF6_ARATH (Q8VZ91) Ethylene-responsive transcription factor 6| (Ethylene-responsive element-binding factor 6) (EREBP-6) (AtERF6) Length = 282 Score = 31.6 bits (70), Expect = 0.97 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +1 Query: 352 SPKKQLRQEEAAPSRSRKPSQYRGVRRRPWGKWA 453 +PK +L A R YRGVR RPWGK+A Sbjct: 119 NPKPELPVPVVAAEEKR---HYRGVRMRPWGKFA 149
>DRE2F_ARATH (Q9SVX5) Dehydration-responsive element-binding protein 2F (DREB2F| protein) Length = 277 Score = 31.6 bits (70), Expect = 0.97 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +1 Query: 412 QYRGVRRRPWGKW 450 QYRGVR+R WGKW Sbjct: 27 QYRGVRQRTWGKW 39
>ERF7_ARATH (Q9LDE4) Ethylene-responsive transcription factor 7| (Ethylene-responsive element-binding factor 7) (EREBP-7) (AtERF7) Length = 244 Score = 31.6 bits (70), Expect = 0.97 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 Query: 397 SRKPSQYRGVRRRPWGKWA 453 S K +YRGVR+RPWG++A Sbjct: 21 SVKEPRYRGVRKRPWGRFA 39
>ERF9_ARATH (Q9FE67) Ethylene-responsive transcription factor 9| (Ethylene-responsive element-binding factor 9) (EREBP-9) (AtERF9) Length = 200 Score = 31.2 bits (69), Expect = 1.3 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +1 Query: 400 RKPSQYRGVRRRPWGKWA 453 RK +RGVR+RPWG++A Sbjct: 28 RKEVHFRGVRKRPWGRYA 45
>ERF3_ARATH (O80339) Ethylene-responsive transcription factor 3| (Ethylene-responsive element-binding factor 3) (EREBP-3) (AtERF3) Length = 225 Score = 31.2 bits (69), Expect = 1.3 Identities = 13/24 (54%), Positives = 19/24 (79%) Frame = +1 Query: 382 AAPSRSRKPSQYRGVRRRPWGKWA 453 AA + S K ++RGVR+RPWG++A Sbjct: 17 AAINGSVKEIRFRGVRKRPWGRFA 40
>DRE2A_ARATH (O82132) Dehydration-responsive element-binding protein 2A (DREB2A| protein) Length = 335 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +1 Query: 346 AASPKKQLRQEEAAPSRSRKPSQYRGVRRRPWGKW 450 A KK + + P SR +RGVR+R WGKW Sbjct: 58 AKGSKKGCMKGKGGPENSR--CSFRGVRQRIWGKW 90
>ERF4_ARATH (O80340) Ethylene-responsive transcription factor 4| (Ethylene-responsive element-binding factor 4) (Related to APETALA-2 protein 5) (EREBP-4) (AtERF4) Length = 222 Score = 31.2 bits (69), Expect = 1.3 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +1 Query: 403 KPSQYRGVRRRPWGKWA 453 K +YRGVR+RPWG++A Sbjct: 21 KEIRYRGVRKRPWGRYA 37
>ERF1_LYCES (Q84XB3) Ethylene-responsive transcription factor 1| (Ethylene-responsive element-binding factor 1) (EREBP-1) (ERF1-like protein) (LeERF1) Length = 244 Score = 31.2 bits (69), Expect = 1.3 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = +1 Query: 403 KPSQYRGVRRRPWGKWA 453 K YRGVR+RPWGK+A Sbjct: 103 KGRHYRGVRQRPWGKFA 119
>ERF4_NICSY (Q9LW49) Ethylene-responsive transcription factor 4| (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NsERF3) Length = 227 Score = 30.8 bits (68), Expect = 1.7 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +1 Query: 403 KPSQYRGVRRRPWGKWA 453 K YRGVR+RPWG++A Sbjct: 23 KEVHYRGVRKRPWGRYA 39
>ERF15_ARATH (Q8VYM0) Ethylene-responsive transcription factor 15| (Ethylene-responsive element-binding factor 15) (EREBP-15) (AtERF15) Length = 243 Score = 30.8 bits (68), Expect = 1.7 Identities = 11/13 (84%), Positives = 13/13 (100%) Frame = +1 Query: 415 YRGVRRRPWGKWA 453 YRGVR+RPWGK+A Sbjct: 86 YRGVRKRPWGKFA 98
>ERF4_TOBAC (Q40477) Ethylene-responsive transcription factor 4| (Ethylene-responsive element-binding factor 4 homolog) (EREBP-3) (NtERF3) Length = 225 Score = 30.8 bits (68), Expect = 1.7 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +1 Query: 403 KPSQYRGVRRRPWGKWA 453 K YRGVR+RPWG++A Sbjct: 23 KEVHYRGVRKRPWGRYA 39
>ERF11_ARATH (Q9C5I3) Ethylene-responsive transcription factor 11| (Ethylene-responsive element-binding factor 11) (EREBP-11) (AtERF11) Length = 166 Score = 30.4 bits (67), Expect = 2.2 Identities = 10/14 (71%), Positives = 14/14 (100%) Frame = +1 Query: 412 QYRGVRRRPWGKWA 453 +YRGVR+RPWG++A Sbjct: 19 RYRGVRKRPWGRYA 32
>ERF12_ARATH (Q94ID6) Ethylene-responsive transcription factor 12| (Ethylene-responsive element-binding factor 12) (EREBP-12) (AtERF12) Length = 189 Score = 30.0 bits (66), Expect = 2.8 Identities = 10/13 (76%), Positives = 13/13 (100%) Frame = +1 Query: 415 YRGVRRRPWGKWA 453 YRGVR+RPWG++A Sbjct: 12 YRGVRKRPWGRYA 24
>ERF3_TOBAC (Q9SXS8) Ethylene-responsive transcription factor 3| (Ethylene-responsive element-binding factor 3 homolog) (EREBP-5) (NtERF5) Length = 225 Score = 29.6 bits (65), Expect = 3.7 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +1 Query: 391 SRSRKPSQYRGVRRRPWGKWA 453 S K ++RGVR+RPWG++A Sbjct: 20 SGGSKEIRFRGVRKRPWGRFA 40
>DRE2B_ARATH (O82133) Dehydration-responsive element-binding protein 2B (DREB2B| protein) Length = 330 Score = 29.3 bits (64), Expect = 4.8 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 Query: 346 AASPKKQLRQEEAAPSRSRKPSQYRGVRRRPWGKW 450 A KK + + P S +RGVR+R WGKW Sbjct: 57 AKGSKKGCMKGKGGPDNSH--CSFRGVRQRIWGKW 89
>DRE2D_ARATH (Q9LQZ2) Putative dehydration-responsive element-binding protein 2D| (DREB2D protein) Length = 206 Score = 29.3 bits (64), Expect = 4.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 349 ASPKKQLRQEEAAPSRSRKPSQYRGVRRRPWGKW 450 AS +K + + P + Y+GVR+R WGKW Sbjct: 22 ASSRKGCMRGKGGPDNAS--CTYKGVRQRTWGKW 53
>DRE2C_ARATH (Q8LFR2) Dehydration-responsive element-binding protein 2C (DREB2C| protein) Length = 341 Score = 29.3 bits (64), Expect = 4.8 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +1 Query: 415 YRGVRRRPWGKW 450 YRGVR+R WGKW Sbjct: 72 YRGVRQRRWGKW 83
>DRE2H_ARATH (Q9SIZ0) Putative dehydration-responsive element-binding protein 2H| (DREB2H protein) Length = 164 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 12/36 (33%) Frame = +1 Query: 379 EAAPSRSRKPSQ------------YRGVRRRPWGKW 450 +A P RSRK Y GVR+R WGKW Sbjct: 50 KAPPKRSRKGCMKGKGGPENGICDYTGVRQRTWGKW 85 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,159,057 Number of Sequences: 219361 Number of extensions: 277978 Number of successful extensions: 1275 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 1241 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1275 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
