ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart51e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome... 323 3e-85
2emb|Y18348.1|OSA18348 Oryza sativa mRNA for U2 snRNP auxiliary f... 323 3e-85
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 323 3e-85
4dbj|AK104767.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 3e-85
5dbj|AK070198.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 3e-85
6gb|AY104048.1| Zea mays PCO150712 mRNA sequence 272 9e-70
7ref|NM_191929.1| Oryza sativa (japonica cultivar-group), predic... 192 7e-46
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 192 7e-46
9dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic D... 192 7e-46
10ref|NM_102530.2| Arabidopsis thaliana RNA binding / nucleic acid... 88 3e-14
11gb|AF344324.1| Arabidopsis thaliana putative U2 snRNP auxiliary ... 88 3e-14
12gb|AY096507.1| Arabidopsis thaliana putative U2 snRNP auxiliary ... 88 3e-14
13gb|AY065202.1| Arabidopsis thaliana putative U2 snRNP auxiliary ... 88 3e-14
14gb|AY122894.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, comp... 88 3e-14
15gb|AY090343.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, comp... 88 3e-14
16gb|AF409139.1| Arabidopsis thaliana U2 auxiliary factor small su... 88 3e-14
17gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana... 88 3e-14
18gb|AY088540.1| Arabidopsis thaliana clone 7697 mRNA, complete se... 88 3e-14
19gb|AC005916.2|T17H3 Arabidopsis thaliana chromosome 1 BAC T17H3 ... 88 3e-14
20gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome... 80 7e-12
21emb|Y18349.1|OSA18349 Oryza sativa mRNA for U2 snRNP auxiliary f... 80 7e-12
22emb|BX816153.1|CNS0ABWQ Arabidopsis thaliana Full-length cDNA Co... 80 7e-12
23emb|BX815280.1|CNS0ABIT Arabidopsis thaliana Full-length cDNA Co... 80 7e-12
24emb|BX841806.1|CNS09Y5O Arabidopsis thaliana Full-length cDNA Co... 80 7e-12
25dbj|AK099481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
26dbj|AK062560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
27gb|BT014022.1| Lycopersicon esculentum clone 133084R, mRNA sequence 70 7e-09
28gb|AY104582.1| Zea mays PCO116110 mRNA sequence 70 7e-09
29ref|XM_786467.1| PREDICTED: Strongylocentrotus purpuratus simila... 64 4e-07
30gb|AC140774.7| Medicago truncatula clone mth2-5e11, complete seq... 62 2e-06
31gb|BC060972.1| Mus musculus U2 small nuclear RNA auxiliary facto... 60 6e-06
32gb|BC057315.1| Mus musculus hypothetical protein MGC30332, mRNA ... 60 6e-06
33gb|BC031744.1| Mus musculus cDNA clone IMAGE:4482075, with appar... 60 6e-06
34gb|AF419339.1| Mus musculus U2 auxiliary factor 26 (U2af26) mRNA... 60 6e-06
35dbj|AK160974.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 60 6e-06
36ref|NM_170760.2| Mus musculus U2 small nuclear RNA auxiliary fac... 60 6e-06
37gb|AC167970.4| Mus musculus BAC clone RP24-471H15 from chromosom... 58 3e-05
38gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome... 58 3e-05
39gb|AF419340.1| Mus musculus U2 auxiliary factor 26 (U2af26) gene... 58 3e-05
40gb|AC149609.5| Mus musculus BAC clone RP23-442K4 from 7, complet... 58 3e-05
41gb|BC051477.1| Mus musculus U2 small nuclear RNA auxiliary facto... 56 1e-04
42gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, comple... 56 1e-04
43dbj|AK222382.1| Ciona intestinalis cDNA, clone:ciem820k08, full ... 54 4e-04
44tpd|BR000129.1| TPA: TPA_exp: Ciona intestinalis Ci-ZF(C3H)-16 m... 54 4e-04
45emb|CR942436.2| Xenopus tropicalis finished cDNA, clone TEgg079l20 52 0.002
46gb|BC108558.1| Xenopus laevis cDNA clone MGC:131026 IMAGE:798019... 48 0.024
47gb|AC010919.11| Drosophila melanogaster clone BACR32K23, complet... 48 0.024
48ref|NM_167474.1| Drosophila melanogaster CG8909-RB (CG8909), mRNA 48 0.024
49gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 ... 48 0.024
50gb|DQ217298.1| Taeniopygia guttata clone 0058P0033A02 RIKEN cDNA... 44 0.38
51gb|DQ214380.1| Taeniopygia guttata clone 0058P0057E11 U2 snRNP a... 44 0.38
52gb|DQ214379.1| Taeniopygia guttata clone 0061P0015E02 U2 snRNP a... 44 0.38
53gb|DQ214378.1| Taeniopygia guttata clone 0058P0001H12 U2 snRNP a... 44 0.38
54gb|DQ214377.1| Taeniopygia guttata clone 0058P0061E04 U2 snRNP a... 44 0.38
55ref|XM_365669.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 0.38
56emb|CR711761.2|CNS0GC59 Tetraodon nigroviridis full-length cDNA 44 0.38
57emb|CR695788.2|CNS0FZTK Tetraodon nigroviridis full-length cDNA 44 0.38
58gb|BC003883.1| Mus musculus cDNA sequence BC003883, mRNA (cDNA c... 44 0.38
59ref|NM_001039663.1| Mus musculus cDNA sequence BC003883 (BC00388... 44 0.38
60gb|AF182199.1|AF182199 Homo sapiens intersectin 2 short isoform ... 44 0.38
61gb|AF182198.1|AF182198 Homo sapiens intersectin 2 long isoform (... 44 0.38
62emb|CT033130.1| Platynereis dumerilii EST IB0AAA26BB03EM1 44 0.38
63emb|CT032570.1| Platynereis dumerilii EST IB0AAA36BC01EM1 44 0.38
64gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 42 1.5
65emb|CR715813.2|CNS0GF9T Tetraodon nigroviridis full-length cDNA 42 1.5
66gb|U67066.1|DMU67066 Drosophila melanogaster U2 snRNP auxiliary ... 42 1.5
67ref|NM_057860.3| Drosophila melanogaster U2 small nuclear ribopr... 42 1.5
68gb|AY058537.1| Drosophila melanogaster LD24048 full length cDNA 42 1.5
69ref|XM_469532.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.9
70gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.9
71ref|XM_363044.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 5.9
72gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.9
73gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.9
74gb|BC049293.1| Xenopus laevis heparin cofactor II, mRNA (cDNA cl... 40 5.9
75gb|AY125326.1| Agathemera crassa 28S ribosomal RNA gene, partial... 40 5.9
76ref|XM_791422.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.9
77emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.9
78gb|BC030625.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:p... 40 5.9
79gb|BC014789.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:p... 40 5.9
80emb|AJ291764.1|GGA291764 Gallus gallus mRNA for U2snRNP auxiliar... 40 5.9
81emb|AJ291763.1|GGA291763 Gallus gallus mRNA for U2snRNP auxiliar... 40 5.9
82emb|AJ291762.1|GGA291762 Gallus gallus U2AF1 gene for U2snRNP au... 40 5.9
83emb|CR749477.1| Homo sapiens mRNA; cDNA DKFZp781G1023 (from clon... 40 5.9
84dbj|AK094780.1| Homo sapiens cDNA FLJ37461 fis, clone BRAWH20112... 40 5.9
85ref|NM_054110.2| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine... 40 5.9
86gb|AY035399.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:p... 40 5.9
87emb|AJ291765.1|GGA291765 Gallus gallus mRNA for U2snRNP auxiliar... 40 5.9
88dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
89gb|AC008279.3| Homo sapiens BAC clone RP11-427F22 from 2, comple... 40 5.9
90ref|NM_204655.1| Gallus gallus U2snRNP auxiliary factor small su... 40 5.9
91gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 geno... 40 5.9
92gb|AC090953.2| Homo sapiens chromosome 3 clone RP11-608O8 map 3p... 40 5.9
93gb|AC090948.2| Homo sapiens chromosome 3 clone RP11-415F23 map 3... 40 5.9
94dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
95dbj|BS000025.1| Pan troglodytes chromosome 22 clone:PTB-017K18, ... 40 5.9
96dbj|AK060373.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
97emb|AL832575.2|HSM803884 Homo sapiens mRNA; cDNA DKFZp451D2416 (... 40 5.9
98gb|AF061727.1|AF061727 Xenopus laevis heparin cofactor II mRNA, ... 40 5.9
99emb|AL831925.1|HSM803261 Homo sapiens mRNA; cDNA DKFZp313I2220 (... 40 5.9 
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0053D02, complete sequence
          Length = 157106

 Score =  323 bits (163), Expect = 3e-85
 Identities = 259/291 (89%)
 Strand = Plus / Plus

                                                                         
Query: 149   atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
             |||||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 91785 atggcggagcatttggcttcaatatttgggactgagaaggatagggttaactgccccttt 91844

                                                                         
Query: 209   tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91845 tacttcaagattggggcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 91904

                                                                         
Query: 269   accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
             ||    ||||| || |||||||||||||||||||| ||||| |||||||||||||| || 
Sbjct: 91905 actgtgtcgccgacaattgtgcttgctaacatgtatcagcgccctgatatgatcacacca 91964

                                                                         
Query: 329   ggagttgatgcccaaggtgtggctatagctccagagaagatgcaggagcactttgaggac 388
             ||||| ||||| |||||     |||| | ||| || ||||||||||||||||||||||| 
Sbjct: 91965 ggagtcgatgctcaaggccaacctattgatcctgaaaagatgcaggagcactttgaggat 92024

                                                                
Query: 389   ttctatgaggatatctacgaggagctgagcaagttcggcgaggttgagacc 439
             ||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 92025 ttctatgaggatatctatgaggagctgagcaagtttggtgaggttgagacc 92075
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>emb|Y18348.1|OSA18348 Oryza sativa mRNA for U2 snRNP auxiliary factor, small subunit 35b
          Length = 1289

 Score =  323 bits (163), Expect = 3e-85
 Identities = 259/291 (89%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           |||||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 136 atggcggagcatttggcttcaatatttgggactgagaaggatagggttaactgccccttt 195

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tacttcaagattggggcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 255

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           ||    ||||| || |||||||||||||||||||| ||||| |||||||||||||| || 
Sbjct: 256 actgtgtcgccgacaattgtgcttgctaacatgtatcagcgccctgatatgatcacacca 315

                                                                       
Query: 329 ggagttgatgcccaaggtgtggctatagctccagagaagatgcaggagcactttgaggac 388
           ||||| ||||| |||||     |||| | ||| || ||||||||||||||||||||||| 
Sbjct: 316 ggagtcgatgctcaaggccaacctattgatcctgaaaagatgcaggagcactttgaggat 375

                                                              
Query: 389 ttctatgaggatatctacgaggagctgagcaagttcggcgaggttgagacc 439
           ||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 376 ttctatgaggatatctatgaggagctgagcaagtttggtgaggttgagacc 426
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  323 bits (163), Expect = 3e-85
 Identities = 259/291 (89%)
 Strand = Plus / Plus

                                                                            
Query: 149      atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
                |||||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 27861368 atggcggagcatttggcttcaatatttgggactgagaaggatagggttaactgccccttt 27861427

                                                                            
Query: 209      tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27861428 tacttcaagattggggcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 27861487

                                                                            
Query: 269      accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
                ||    ||||| || |||||||||||||||||||| ||||| |||||||||||||| || 
Sbjct: 27861488 actgtgtcgccgacaattgtgcttgctaacatgtatcagcgccctgatatgatcacacca 27861547

                                                                            
Query: 329      ggagttgatgcccaaggtgtggctatagctccagagaagatgcaggagcactttgaggac 388
                ||||| ||||| |||||     |||| | ||| || ||||||||||||||||||||||| 
Sbjct: 27861548 ggagtcgatgctcaaggccaacctattgatcctgaaaagatgcaggagcactttgaggat 27861607

                                                                   
Query: 389      ttctatgaggatatctacgaggagctgagcaagttcggcgaggttgagacc 439
                ||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 27861608 ttctatgaggatatctatgaggagctgagcaagtttggtgaggttgagacc 27861658
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>dbj|AK104767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A01, full
           insert sequence
          Length = 1287

 Score =  323 bits (163), Expect = 3e-85
 Identities = 259/291 (89%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           |||||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 132 atggcggagcatttggcttcaatatttgggactgagaaggatagggttaactgccccttt 191

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tacttcaagattggggcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 251

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           ||    ||||| || |||||||||||||||||||| ||||| |||||||||||||| || 
Sbjct: 252 actgtgtcgccgacaattgtgcttgctaacatgtatcagcgccctgatatgatcacacca 311

                                                                       
Query: 329 ggagttgatgcccaaggtgtggctatagctccagagaagatgcaggagcactttgaggac 388
           ||||| ||||| |||||     |||| | ||| || ||||||||||||||||||||||| 
Sbjct: 312 ggagtcgatgctcaaggccaacctattgatcctgaaaagatgcaggagcactttgaggat 371

                                                              
Query: 389 ttctatgaggatatctacgaggagctgagcaagttcggcgaggttgagacc 439
           ||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 372 ttctatgaggatatctatgaggagctgagcaagtttggtgaggttgagacc 422
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>dbj|AK070198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041B11, full
           insert sequence
          Length = 1309

 Score =  323 bits (163), Expect = 3e-85
 Identities = 259/291 (89%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           |||||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 143 atggcggagcatttggcttcaatatttgggactgagaaggatagggttaactgccccttt 202

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tacttcaagattggggcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 262

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           ||    ||||| || |||||||||||||||||||| ||||| |||||||||||||| || 
Sbjct: 263 actgtgtcgccgacaattgtgcttgctaacatgtatcagcgccctgatatgatcacacca 322

                                                                       
Query: 329 ggagttgatgcccaaggtgtggctatagctccagagaagatgcaggagcactttgaggac 388
           ||||| ||||| |||||     |||| | ||| || ||||||||||||||||||||||| 
Sbjct: 323 ggagtcgatgctcaaggccaacctattgatcctgaaaagatgcaggagcactttgaggat 382

                                                              
Query: 389 ttctatgaggatatctacgaggagctgagcaagttcggcgaggttgagacc 439
           ||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 383 ttctatgaggatatctatgaggagctgagcaagtttggtgaggttgagacc 433
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>gb|AY104048.1| Zea mays PCO150712 mRNA sequence
          Length = 930

 Score =  272 bits (137), Expect = 9e-70
 Identities = 251/289 (86%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           |||||||| ||||||||||| || || ||||| |||||||| |||||||||||||| |||
Sbjct: 138 atggcggagcacttggcttcgatcttcggcactgagaaggacagggtcaactgccctttt 197

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| || || |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 198 tacttcaagattggggcctgtcgtcatggggatcgctgctctcgtctgcacaacaggcca 257

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           || | ||| |||||| ||||||||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 258 actatatcaccaactcttgtgcttgctaacatgtatcagcgccctgatatgataacccct 317

                                                                       
Query: 329 ggagttgatgcccaaggtgtggctatagctccagagaagatgcaggagcactttgaggac 388
           ||||||||||| |||||     |||| |  || ||||||||||||||||| |||||||||
Sbjct: 318 ggagttgatgctcaaggccaacctattgaccctgagaagatgcaggagcattttgaggac 377

                                                            
Query: 389 ttctatgaggatatctacgaggagctgagcaagttcggcgaggttgaga 437
           ||||||||||| ||||| |||||| || | ||||| || ||| ||||||
Sbjct: 378 ttctatgaggacatctatgaggagttggggaagtttggtgagattgaga 426
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>ref|NM_191929.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2106

 Score =  192 bits (97), Expect = 7e-46
 Identities = 241/289 (83%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           ||||| || ||||| |||||||| ||||| || ||||| |||| |||||||||||| |||
Sbjct: 1   atggcagagcacttagcttcaatatttggtacagagaaagataaggtcaactgcccattt 60

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| |||||||||||||||||||| |||||  |||| || |||||||| 
Sbjct: 61  tacttcaagattggggcttgccgtcatggggatcggtgctcttgtcttcataacaggccc 120

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           |||| ||| |||||| ||||| |||| |||||||| ||||| |||||||||||||| || 
Sbjct: 121 accatatcaccaactgttgtgtttgcgaacatgtatcagcgccctgatatgatcacgccc 180

                                                                       
Query: 329 ggagttgatgcccaaggtgtggctatagctccagagaagatgcaggagcactttgaggac 388
           || |||||||| |||||   | | |||| |||     ||||||||||||| |||||||| 
Sbjct: 181 ggggttgatgctcaaggccagccgatagatccccgccagatgcaggagcattttgaggat 240

                                                            
Query: 389 ttctatgaggatatctacgaggagctgagcaagttcggcgaggttgaga 437
           ||||||||||| ||||  ||||| || |||||||| || ||| ||||||
Sbjct: 241 ttctatgaggacatctttgaggaactaagcaagtttggtgagattgaga 289
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  192 bits (97), Expect = 7e-46
 Identities = 241/289 (83%)
 Strand = Plus / Minus

                                                                            
Query: 149      atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
                ||||| || ||||| |||||||| ||||| || ||||| |||| |||||||||||| |||
Sbjct: 27311663 atggcagagcacttagcttcaatatttggtacagagaaagataaggtcaactgcccattt 27311604

                                                                            
Query: 209      tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
                |||||||||||||| |||||||||||||||||||| |||||  |||| || |||||||| 
Sbjct: 27311603 tacttcaagattggggcttgccgtcatggggatcggtgctcttgtcttcataacaggccc 27311544

                                                                            
Query: 269      accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
                |||| ||| |||||| ||||| |||| |||||||| ||||| |||||||||||||| || 
Sbjct: 27311543 accatatcaccaactgttgtgtttgcgaacatgtatcagcgccctgatatgatcacgccc 27311484

                                                                            
Query: 329      ggagttgatgcccaaggtgtggctatagctccagagaagatgcaggagcactttgaggac 388
                || |||||||| |||||   | | |||| |||     ||||||||||||| |||||||| 
Sbjct: 27311483 ggggttgatgctcaaggccagccgatagatccccgccagatgcaggagcattttgaggat 27311424

                                                                 
Query: 389      ttctatgaggatatctacgaggagctgagcaagttcggcgaggttgaga 437
                ||||||||||| ||||  ||||| || |||||||| || ||| ||||||
Sbjct: 27311423 ttctatgaggacatctttgaggaactaagcaagtttggtgagattgaga 27311375



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 12       ccgctccgccgcgccgcctc 31
                ||||||||||||||||||||
Sbjct: 17776376 ccgctccgccgcgccgcctc 17776395
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>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0063G05
          Length = 182681

 Score =  192 bits (97), Expect = 7e-46
 Identities = 241/289 (83%)
 Strand = Plus / Minus

                                                                         
Query: 149   atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
             ||||| || ||||| |||||||| ||||| || ||||| |||| |||||||||||| |||
Sbjct: 92180 atggcagagcacttagcttcaatatttggtacagagaaagataaggtcaactgcccattt 92121

                                                                         
Query: 209   tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
             |||||||||||||| |||||||||||||||||||| |||||  |||| || |||||||| 
Sbjct: 92120 tacttcaagattggggcttgccgtcatggggatcggtgctcttgtcttcataacaggccc 92061

                                                                         
Query: 269   accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
             |||| ||| |||||| ||||| |||| |||||||| ||||| |||||||||||||| || 
Sbjct: 92060 accatatcaccaactgttgtgtttgcgaacatgtatcagcgccctgatatgatcacgccc 92001

                                                                         
Query: 329   ggagttgatgcccaaggtgtggctatagctccagagaagatgcaggagcactttgaggac 388
             || |||||||| |||||   | | |||| |||     ||||||||||||| |||||||| 
Sbjct: 92000 ggggttgatgctcaaggccagccgatagatccccgccagatgcaggagcattttgaggat 91941

                                                              
Query: 389   ttctatgaggatatctacgaggagctgagcaagttcggcgaggttgaga 437
             ||||||||||| ||||  ||||| || |||||||| || ||| ||||||
Sbjct: 91940 ttctatgaggacatctttgaggaactaagcaagtttggtgagattgaga 91892
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>ref|NM_102530.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G27650
           mRNA, complete cds
          Length = 1381

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 152/188 (80%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           |||||||| || ||||||||||| ||||| || ||||| || || || || ||||| || 
Sbjct: 176 atggcggagcatttggcttcaatctttggtactgagaaagacagagtgaattgccctttc 235

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| |||||||||||||| || || ||||| ||||| |||||| | || 
Sbjct: 236 tacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcct 295

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           ||||  || |||||  |  | ||| | |||||||||||  ||||||| ||||| ||||||
Sbjct: 296 accatctccccaacactccttctttcaaacatgtaccaaaggcctgacatgattacccct 355

                   
Query: 329 ggagttga 336
           || |||||
Sbjct: 356 ggtgttga 363



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 365 aagatgcaggagcactttgaggacttctatgaggat 400
           ||||| ||||||||||||||||| |||| |||||||
Sbjct: 392 aagattcaggagcactttgaggatttctttgaggat 427
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>gb|AF344324.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor (At1g27650)
           mRNA, complete cds
          Length = 891

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 152/188 (80%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           |||||||| || ||||||||||| ||||| || ||||| || || || || ||||| || 
Sbjct: 1   atggcggagcatttggcttcaatctttggtactgagaaagacagagtgaattgccctttc 60

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| |||||||||||||| || || ||||| ||||| |||||| | || 
Sbjct: 61  tacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcct 120

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           ||||  || |||||  |  | ||| | |||||||||||  ||||||| ||||| ||||||
Sbjct: 121 accatctccccaacactccttctttcaaacatgtaccaaaggcctgacatgattacccct 180

                   
Query: 329 ggagttga 336
           || |||||
Sbjct: 181 ggtgttga 188



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 365 aagatgcaggagcactttgaggacttctatgaggat 400
           ||||| ||||||||||||||||| |||| |||||||
Sbjct: 217 aagattcaggagcactttgaggatttctttgaggat 252
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>gb|AY096507.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor protein
           (At1g27650) mRNA, complete cds
          Length = 922

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 152/188 (80%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           |||||||| || ||||||||||| ||||| || ||||| || || || || ||||| || 
Sbjct: 1   atggcggagcatttggcttcaatctttggtactgagaaagacagagtgaattgccctttc 60

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| |||||||||||||| || || ||||| ||||| |||||| | || 
Sbjct: 61  tacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcct 120

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           ||||  || |||||  |  | ||| | |||||||||||  ||||||| ||||| ||||||
Sbjct: 121 accatctccccaacactccttctttcaaacatgtaccaaaggcctgacatgattacccct 180

                   
Query: 329 ggagttga 336
           || |||||
Sbjct: 181 ggtgttga 188



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 365 aagatgcaggagcactttgaggacttctatgaggat 400
           ||||| ||||||||||||||||| |||| |||||||
Sbjct: 217 aagattcaggagcactttgaggatttctttgaggat 252
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>gb|AY065202.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor (At1g27650)
           mRNA, complete cds
          Length = 1306

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 152/188 (80%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           |||||||| || ||||||||||| ||||| || ||||| || || || || ||||| || 
Sbjct: 148 atggcggagcatttggcttcaatctttggtactgagaaagacagagtgaattgccctttc 207

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| |||||||||||||| || || ||||| ||||| |||||| | || 
Sbjct: 208 tacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcct 267

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           ||||  || |||||  |  | ||| | |||||||||||  ||||||| ||||| ||||||
Sbjct: 268 accatctccccaacactccttctttcaaacatgtaccaaaggcctgacatgattacccct 327

                   
Query: 329 ggagttga 336
           || |||||
Sbjct: 328 ggtgttga 335



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 365 aagatgcaggagcactttgaggacttctatgaggat 400
           ||||| ||||||||||||||||| |||| |||||||
Sbjct: 364 aagattcaggagcactttgaggatttctttgaggat 399
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>gb|AY122894.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, complete cds
          Length = 891

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 152/188 (80%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           |||||||| || ||||||||||| ||||| || ||||| || || || || ||||| || 
Sbjct: 1   atggcggagcatttggcttcaatctttggtactgagaaagacagagtgaattgccctttc 60

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| |||||||||||||| || || ||||| ||||| |||||| | || 
Sbjct: 61  tacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcct 120

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           ||||  || |||||  |  | ||| | |||||||||||  ||||||| ||||| ||||||
Sbjct: 121 accatctccccaacactccttctttcaaacatgtaccaaaggcctgacatgattacccct 180

                   
Query: 329 ggagttga 336
           || |||||
Sbjct: 181 ggtgttga 188



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 365 aagatgcaggagcactttgaggacttctatgaggat 400
           ||||| ||||||||||||||||| |||| |||||||
Sbjct: 217 aagattcaggagcactttgaggatttctttgaggat 252
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>gb|AY090343.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, complete cds
          Length = 1233

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 152/188 (80%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           |||||||| || ||||||||||| ||||| || ||||| || || || || ||||| || 
Sbjct: 167 atggcggagcatttggcttcaatctttggtactgagaaagacagagtgaattgccctttc 226

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| |||||||||||||| || || ||||| ||||| |||||| | || 
Sbjct: 227 tacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcct 286

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           ||||  || |||||  |  | ||| | |||||||||||  ||||||| ||||| ||||||
Sbjct: 287 accatctccccaacactccttctttcaaacatgtaccaaaggcctgacatgattacccct 346

                   
Query: 329 ggagttga 336
           || |||||
Sbjct: 347 ggtgttga 354



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 365 aagatgcaggagcactttgaggacttctatgaggat 400
           ||||| ||||||||||||||||| |||| |||||||
Sbjct: 383 aagattcaggagcactttgaggatttctttgaggat 418
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>gb|AF409139.1| Arabidopsis thaliana U2 auxiliary factor small subunit (AUSA) mRNA,
           complete cds
          Length = 980

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 152/188 (80%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           |||||||| || ||||||||||| ||||| || ||||| || || || || ||||| || 
Sbjct: 41  atggcggagcatttggcttcaatctttggtactgagaaagacagagtgaattgccctttc 100

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| |||||||||||||| || || ||||| ||||| |||||| | || 
Sbjct: 101 tacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcct 160

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           ||||  || |||||  |  | ||| | |||||||||||  ||||||| ||||| ||||||
Sbjct: 161 accatctccccaacactccttctttcaaacatgtaccaaaggcctgacatgattacccct 220

                   
Query: 329 ggagttga 336
           || |||||
Sbjct: 221 ggtgttga 228



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 365 aagatgcaggagcactttgaggacttctatgaggat 400
           ||||| ||||||||||||||||| |||| |||||||
Sbjct: 257 aagattcaggagcactttgaggatttctttgaggat 292
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>gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana BAC T22C5 from chromosome I,
             complete sequence
          Length = 106753

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 152/188 (80%)
 Strand = Plus / Plus

                                                                         
Query: 149   atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
             |||||||| || ||||||||||| ||||| || ||||| || || || || ||||| || 
Sbjct: 27135 atggcggagcatttggcttcaatctttggtactgagaaagacagagtgaattgccctttc 27194

                                                                         
Query: 209   tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
             |||||||||||||| |||||||||||||| || || ||||| ||||| |||||| | || 
Sbjct: 27195 tacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcct 27254

                                                                         
Query: 269   accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
             ||||  || |||||  |  | ||| | |||||||||||  ||||||| ||||| ||||||
Sbjct: 27255 accatctccccaacactccttctttcaaacatgtaccaaaggcctgacatgattacccct 27314

                     
Query: 329   ggagttga 336
             || |||||
Sbjct: 27315 ggtgttga 27322



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 365   aagatgcaggagcactttgaggacttctatgaggat 400
             ||||| ||||||||||||||||| |||| |||||||
Sbjct: 27351 aagattcaggagcactttgaggatttctttgaggat 27386
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>gb|AY088540.1| Arabidopsis thaliana clone 7697 mRNA, complete sequence
          Length = 1362

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 152/188 (80%)
 Strand = Plus / Plus

                                                                       
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
           |||||||| || ||||||||||| ||||| || ||||| || || || || ||||| || 
Sbjct: 176 atggcggagcatttggcttcaatctttggtactgagaaagacagagtgaattgccctttc 235

                                                                       
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
           |||||||||||||| |||||||||||||| || || ||||| ||||| |||||| | || 
Sbjct: 236 tacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcct 295

                                                                       
Query: 269 accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
           ||||  || |||||  |  | ||| | |||||||||||  ||||||| ||||| ||||||
Sbjct: 296 accatctccccaacactccttctttcaaacatgtaccaaaggcctgacatgattacccct 355

                   
Query: 329 ggagttga 336
           || |||||
Sbjct: 356 ggtgttga 363



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 365 aagatgcaggagcactttgaggacttctatgaggat 400
           ||||| ||||||||||||||||| |||| |||||||
Sbjct: 392 aagattcaggagcactttgaggatttctttgaggat 427
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>gb|AC005916.2|T17H3 Arabidopsis thaliana chromosome 1 BAC T17H3 sequence, complete sequence
          Length = 65839

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 152/188 (80%)
 Strand = Plus / Plus

                                                                         
Query: 149   atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgccccttt 208
             |||||||| || ||||||||||| ||||| || ||||| || || || || ||||| || 
Sbjct: 59548 atggcggagcatttggcttcaatctttggtactgagaaagacagagtgaattgccctttc 59607

                                                                         
Query: 209   tacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggcca 268
             |||||||||||||| |||||||||||||| || || ||||| ||||| |||||| | || 
Sbjct: 59608 tacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcct 59667

                                                                         
Query: 269   accacatcgccaactattgtgcttgctaacatgtaccagcggcctgatatgatcacccct 328
             ||||  || |||||  |  | ||| | |||||||||||  ||||||| ||||| ||||||
Sbjct: 59668 accatctccccaacactccttctttcaaacatgtaccaaaggcctgacatgattacccct 59727

                     
Query: 329   ggagttga 336
             || |||||
Sbjct: 59728 ggtgttga 59735



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 365   aagatgcaggagcactttgaggacttctatgaggat 400
             ||||| ||||||||||||||||| |||| |||||||
Sbjct: 59764 aagattcaggagcactttgaggatttctttgaggat 59799
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>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0052C07, complete sequence
          Length = 154528

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                         
Query: 164   gcttcaatttttggcacggagaaggatagggtcaactgccccttttacttcaagattgga 223
             ||||| || |||||||||||||||||  | || ||||||||||| ||||||||||| || 
Sbjct: 54347 gcttccatctttggcacggagaaggaccgcgtgaactgccccttctacttcaagatcggc 54288

                                                     
Query: 224   gcttgccgtcatggggatcgttgctcccgtctgcacaaca 263
             || ||||| ||||| || || |||||||| ||||||||||
Sbjct: 54287 gcgtgccgccatggcgaccgatgctcccgcctgcacaaca 54248



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 296   aacatgtaccagcggcctgatatgatcacccctggagttgatgc 339
             |||||||||| ||| || || ||||||||||||||| |||||||
Sbjct: 54215 aacatgtacctgcgtccggacatgatcacccctggaattgatgc 54172
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>emb|Y18349.1|OSA18349 Oryza sativa mRNA for U2 snRNP auxiliary factor, small subunit 35a
          Length = 1277

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                       
Query: 164 gcttcaatttttggcacggagaaggatagggtcaactgccccttttacttcaagattgga 223
           ||||| || |||||||||||||||||  | || ||||||||||| ||||||||||| || 
Sbjct: 227 gcttccatctttggcacggagaaggaccgcgtgaactgccccttctacttcaagatcggc 286

                                                   
Query: 224 gcttgccgtcatggggatcgttgctcccgtctgcacaaca 263
           || ||||| ||||| || || |||||||| ||||||||||
Sbjct: 287 gcgtgccgccatggcgaccgatgctcccgcctgcacaaca 326



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 296 aacatgtaccagcggcctgatatgatcacccctggagttgatgc 339
           |||||||||| ||| || || ||||||||||||||| |||||||
Sbjct: 359 aacatgtacctgcgtccggacatgatcacccctggaattgatgc 402
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>emb|BX816153.1|CNS0ABWQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH31ZA11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1323

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 142/176 (80%)
 Strand = Plus / Plus

                                                                       
Query: 161 ttggcttcaatttttggcacggagaaggatagggtcaactgccccttttacttcaagatt 220
           ||||||||||| ||||| || ||||| || || || || ||||| || ||||||||||||
Sbjct: 182 ttggcttcaatctttggtactgagaaagacagagtgaattgccctttctacttcaagatt 241

                                                                       
Query: 221 ggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggccaaccacatcgcca 280
           || |||||||||||||| || || ||||| ||||| |||||| | || ||||  || |||
Sbjct: 242 ggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcctaccatctcccca 301

                                                                   
Query: 281 actattgtgcttgctaacatgtaccagcggcctgatatgatcacccctggagttga 336
           ||  |  | ||| | |||||||||||  ||||||| ||||| |||||||| |||||
Sbjct: 302 acactccttctttcaaacatgtaccaaaggcctgacatgattacccctggtgttga 357



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 365 aagatgcaggagcactttgaggacttctatgaggat 400
           ||||| ||||||||||||||||| |||| |||||||
Sbjct: 386 aagattcaggagcactttgaggatttctttgaggat 421
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>emb|BX815280.1|CNS0ABIT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS49ZC03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1279

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 142/176 (80%)
 Strand = Plus / Plus

                                                                       
Query: 161 ttggcttcaatttttggcacggagaaggatagggtcaactgccccttttacttcaagatt 220
           ||||||||||| ||||| || ||||| || || || || ||||| || ||||||||||||
Sbjct: 163 ttggcttcaatctttggtactgagaaagacagagtgaattgccctttctacttcaagatt 222

                                                                       
Query: 221 ggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggccaaccacatcgcca 280
           || |||||||||||||| || || ||||| ||||| |||||| | || ||||  || |||
Sbjct: 223 ggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcctaccatctcccca 282

                                                                   
Query: 281 actattgtgcttgctaacatgtaccagcggcctgatatgatcacccctggagttga 336
           ||  |  | ||| | |||||||||||  ||||||| ||||| |||||||| |||||
Sbjct: 283 acactccttctttcaaacatgtaccaaaggcctgagatgattacccctggtgttga 338



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 365 aagatgcaggagcactttgaggacttctatgaggat 400
           ||||| ||||||||||||||||| |||| |||||||
Sbjct: 367 aagattcaggagcactttgaggatttctttgaggat 402
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>emb|BX841806.1|CNS09Y5O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB88ZF01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1115

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 142/176 (80%)
 Strand = Plus / Plus

                                                                       
Query: 161 ttggcttcaatttttggcacggagaaggatagggtcaactgccccttttacttcaagatt 220
           ||||||||||| ||||| || ||||| || || || || ||||| || ||||||||||||
Sbjct: 195 ttggcttcaatctttggtactgagaaagacagagtgaattgccctttctacttcaagatt 254

                                                                       
Query: 221 ggagcttgccgtcatggggatcgttgctcccgtctgcacaacaggccaaccacatcgcca 280
           || |||||||||||||| || || ||||| ||||| |||||| | || ||||  || |||
Sbjct: 255 ggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcctaccatctcccca 314

                                                                   
Query: 281 actattgtgcttgctaacatgtaccagcggcctgatatgatcacccctggagttga 336
           ||  |  | ||| | |||||||||||  ||||||| ||||| |||||||| |||||
Sbjct: 315 acactccttctttcaaacatgtaccaaaggcctgacatgattacccctggtgttga 370



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 365 aagatgcaggagcactttgaggacttctatgagg 398
           ||||| ||||||||||||||||| |||| |||||
Sbjct: 399 aagattcaggagcactttgaggatttctttgagg 432
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>dbj|AK099481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G09, full
           insert sequence
          Length = 1499

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                       
Query: 164 gcttcaatttttggcacggagaaggatagggtcaactgccccttttacttcaagattgga 223
           ||||| || |||||||||||||||||  | || ||||||||||| ||||||||||| || 
Sbjct: 448 gcttccatctttggcacggagaaggaccgcgtgaactgccccttctacttcaagatcggc 507

                                                   
Query: 224 gcttgccgtcatggggatcgttgctcccgtctgcacaaca 263
           || ||||| ||||| || || |||||||| ||||||||||
Sbjct: 508 gcgtgccgccatggcgaccgatgctcccgcctgcacaaca 547



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 296 aacatgtaccagcggcctgatatgatcacccctggagttgatgc 339
           |||||||||| ||| || || ||||||||||||||| |||||||
Sbjct: 580 aacatgtacctgcgtccggacatgatcacccctggaattgatgc 623
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>dbj|AK062560.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E06, full
           insert sequence
          Length = 1257

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                       
Query: 164 gcttcaatttttggcacggagaaggatagggtcaactgccccttttacttcaagattgga 223
           ||||| || |||||||||||||||||  | || ||||||||||| ||||||||||| || 
Sbjct: 238 gcttccatctttggcacggagaaggaccgcgtgaactgccccttctacttcaagatcggc 297

                                                   
Query: 224 gcttgccgtcatggggatcgttgctcccgtctgcacaaca 263
           || ||||| ||||| || || |||||||| ||||||||||
Sbjct: 298 gcgtgccgccatggcgaccgatgctcccgcctgcacaaca 337



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 296 aacatgtaccagcggcctgatatgatcacccctggagttgatgc 339
           |||||||||| ||| || || ||||||||||||||| |||||||
Sbjct: 370 aacatgtacctgcgtccggacatgatcacccctggaattgatgc 413
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>gb|BT014022.1| Lycopersicon esculentum clone 133084R, mRNA sequence
          Length = 1449

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 294 ctaacatgtaccagcggcctgatatgatcacccctggagttga 336
           |||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 171 ctaacatgtaccagcgtcctgatatgatcacccctggtgttga 213
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>gb|AY104582.1| Zea mays PCO116110 mRNA sequence
          Length = 1178

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 173 tttggcacggagaaggatagggtcaactgccccttttacttcaagattggagcttgccgt 232
           |||||||||||||||||  | || ||||||||||| ||||||||||| || || ||||| 
Sbjct: 455 tttggcacggagaaggaccgcgtgaactgccccttctacttcaagatcggcgcatgccgc 514

                                          
Query: 233 catggggatcgttgctcccgtctgcacaaca 263
           || || || || |||||||| ||||||||||
Sbjct: 515 cacggcgaccggtgctcccgcctgcacaaca 545



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 371 caggagcactttgaggacttctatgaggatatctacgaggagctgagcaagttcggcgag 430
           |||||| |||| ||||||||||| ||||| |||| || |||||||||||||  |||||||
Sbjct: 653 caggaggacttcgaggacttctacgaggacatcttcgtggagctgagcaagcacggcgag 712



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 296 aacatgtaccagcggcctgatatgatcacccc 327
           ||||||||||||||||| || |||||||||||
Sbjct: 578 aacatgtaccagcggccggacatgatcacccc 609
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>ref|XM_786467.1| PREDICTED: Strongylocentrotus purpuratus similar to U2 small
           nuclear RNA auxillary factor 1 isoform b (LOC586695),
           partial mRNA
          Length = 351

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 83/100 (83%)
 Strand = Plus / Plus

                                                                       
Query: 164 gcttcaatttttggcacggagaaggatagggtcaactgccccttttacttcaagattgga 223
           ||||| ||||||||||| || || || |  ||||||||| |||| |||||||||||||||
Sbjct: 16  gcttccatttttggcactgaaaaagacaaagtcaactgctccttctacttcaagattgga 75

                                                   
Query: 224 gcttgccgtcatggggatcgttgctcccgtctgcacaaca 263
           || || |||||||| || || || ||||| || |||||||
Sbjct: 76  gcatgtcgtcatggagaccggtgttcccgcctccacaaca 115
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>gb|AC140774.7| Medicago truncatula clone mth2-5e11, complete sequence
          Length = 116998

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                         
Query: 148   aatggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgcccctt 207
             ||||||||||||||| || ||||| || ||||| || || || || || |||||||| ||
Sbjct: 20032 aatggcggaacacttagcatcaatcttcggcacagaaaaagacagagtaaactgcccttt 19973

                                                                    
Query: 208   ttacttcaagattggagcttgccgtcatggggatcgttgctcccgtctgcacaac 262
              ||||||||||| || || || ||||| || || |||||||| ||||| ||||||
Sbjct: 19972 ctacttcaagatcggcgcgtgtcgtcacggcgaccgttgctctcgtctccacaac 19918
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>gb|BC060972.1| Mus musculus U2 small nuclear RNA auxiliary factor 1-like 4, mRNA
           (cDNA clone MGC:74063 IMAGE:6593404), complete cds
          Length = 892

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 182 gagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcatggggat 241
           |||||||| | ||| |||||| | |||||||| ||||||||||| ||||| || ||||| 
Sbjct: 50  gagaaggacaaggttaactgctctttttactttaagattggagcctgccggcacggggac 109

                                 
Query: 242 cgttgctcccgtctgcacaaca 263
           || |||||||| || |||||||
Sbjct: 110 cggtgctcccgacttcacaaca 131
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>gb|BC057315.1| Mus musculus hypothetical protein MGC30332, mRNA (cDNA clone
           IMAGE:6811485), partial cds
          Length = 2910

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 182 gagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcatggggat 241
           |||||||| | ||| |||||| | |||||||| ||||||||||| ||||| || ||||| 
Sbjct: 40  gagaaggacaaggttaactgctctttttactttaagattggagcctgccggcacggggac 99

                                 
Query: 242 cgttgctcccgtctgcacaaca 263
           || |||||||| || |||||||
Sbjct: 100 cggtgctcccgacttcacaaca 121
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>gb|BC031744.1| Mus musculus cDNA clone IMAGE:4482075, with apparent retained
           intron
          Length = 2735

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 182 gagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcatggggat 241
           |||||||| | ||| |||||| | |||||||| ||||||||||| ||||| || ||||| 
Sbjct: 35  gagaaggacaaggttaactgctctttttactttaagattggagcctgccggcacggggac 94

                                 
Query: 242 cgttgctcccgtctgcacaaca 263
           || |||||||| || |||||||
Sbjct: 95  cggtgctcccgacttcacaaca 116
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>gb|AF419339.1| Mus musculus U2 auxiliary factor 26 (U2af26) mRNA, complete cds
          Length = 663

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 182 gagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcatggggat 241
           |||||||| | ||| |||||| | |||||||| ||||||||||| ||||| || ||||| 
Sbjct: 34  gagaaggacaaggttaactgctctttttactttaagattggagcctgccggcacggggac 93

                                 
Query: 242 cgttgctcccgtctgcacaaca 263
           || |||||||| || |||||||
Sbjct: 94  cggtgctcccgacttcacaaca 115
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>dbj|AK160974.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:4022425H17 product:U2 small nuclear RNA
           auxiliary factor 1-like 4, full insert sequence
          Length = 3009

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 182 gagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcatggggat 241
           |||||||| | ||| |||||| | |||||||| ||||||||||| ||||| || ||||| 
Sbjct: 47  gagaaggacaaggttaactgctctttttactttaagattggagcctgccggcacggggac 106

                                 
Query: 242 cgttgctcccgtctgcacaaca 263
           || |||||||| || |||||||
Sbjct: 107 cggtgctcccgacttcacaaca 128
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>ref|NM_170760.2| Mus musculus U2 small nuclear RNA auxiliary factor 1-like 4
           (U2af1l4), mRNA
          Length = 892

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 182 gagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcatggggat 241
           |||||||| | ||| |||||| | |||||||| ||||||||||| ||||| || ||||| 
Sbjct: 50  gagaaggacaaggttaactgctctttttactttaagattggagcctgccggcacggggac 109

                                 
Query: 242 cgttgctcccgtctgcacaaca 263
           || |||||||| || |||||||
Sbjct: 110 cggtgctcccgacttcacaaca 131
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>gb|AC167970.4| Mus musculus BAC clone RP24-471H15 from chromosome 7, complete sequence
          Length = 238950

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                         
Query: 191   agggtcaactgccccttttacttcaagattggagcttgccgtcatggggatcgttgctcc 250
             ||||| |||||| | |||||||| ||||||||||| ||||| || ||||| || ||||||
Sbjct: 56761 agggttaactgctctttttactttaagattggagcctgccggcacggggaccggtgctcc 56702

                          
Query: 251   cgtctgcacaaca 263
             || || |||||||
Sbjct: 56701 cgacttcacaaca 56689
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>gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome 7, complete sequence
          Length = 214959

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                          
Query: 191    agggtcaactgccccttttacttcaagattggagcttgccgtcatggggatcgttgctcc 250
              ||||| |||||| | |||||||| ||||||||||| ||||| || ||||| || ||||||
Sbjct: 191469 agggttaactgctctttttactttaagattggagcctgccggcacggggaccggtgctcc 191410

                           
Query: 251    cgtctgcacaaca 263
              || || |||||||
Sbjct: 191409 cgacttcacaaca 191397
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>gb|AF419340.1| Mus musculus U2 auxiliary factor 26 (U2af26) gene, complete cds
          Length = 1824

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 191 agggtcaactgccccttttacttcaagattggagcttgccgtcatggggatcgttgctcc 250
           ||||| |||||| | |||||||| ||||||||||| ||||| || ||||| || ||||||
Sbjct: 175 agggttaactgctctttttactttaagattggagcctgccggcacggggaccggtgctcc 234

                        
Query: 251 cgtctgcacaaca 263
           || || |||||||
Sbjct: 235 cgacttcacaaca 247
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>gb|AC149609.5| Mus musculus BAC clone RP23-442K4 from 7, complete sequence
          Length = 196912

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                         
Query: 191   agggtcaactgccccttttacttcaagattggagcttgccgtcatggggatcgttgctcc 250
             ||||| |||||| | |||||||| ||||||||||| ||||| || ||||| || ||||||
Sbjct: 88204 agggttaactgctctttttactttaagattggagcctgccggcacggggaccggtgctcc 88263

                          
Query: 251   cgtctgcacaaca 263
             || || |||||||
Sbjct: 88264 cgacttcacaaca 88276
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>gb|BC051477.1| Mus musculus U2 small nuclear RNA auxiliary factor 1-like 4, mRNA
           (cDNA clone IMAGE:1513450), with apparent retained
           intron
          Length = 701

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 192 gggtcaactgccccttttacttcaagattggagcttgccgtcatggggatcgttgctccc 251
           |||| |||||| | |||||||| ||||||||||| ||||| || ||||| || |||||||
Sbjct: 68  gggttaactgctctttttactttaagattggagcctgccggcacggggaccggtgctccc 127

                       
Query: 252 gtctgcacaaca 263
           | || |||||||
Sbjct: 128 gacttcacaaca 139
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>gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, complete cds
          Length = 1199

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggcacggagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcat 235
           ||||||||||||||  | || |||||||| || ||||||||||| || || ||||| || 
Sbjct: 31  ggcacggagaaggaccgcgtgaactgcccgttctacttcaagatcggcgcgtgccggcac 90

                                       
Query: 236 ggggatcgttgctcccgtctgcacaaca 263
           || || || |||||||| ||||||||||
Sbjct: 91  ggcgaccgctgctcccgcctgcacaaca 118



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 378 actttgaggacttctatgaggatatctacgaggagctgagcaagttcggcgaggttgaga 437
           |||| ||||||||||| ||||| |||| ||| ||||| ||||||  ||||||||| ||||
Sbjct: 233 acttcgaggacttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgaga 292



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 296 aacatgtaccagcggcctgatatgatcacccc 327
           |||||||||||||| || || |||||||||||
Sbjct: 151 aacatgtaccagcgccccgacatgatcacccc 182
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>dbj|AK222382.1| Ciona intestinalis cDNA, clone:ciem820k08, full insert sequence
          Length = 1157

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 148 aatggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgc 202
           |||||||||| |||| |||||||||||||| || || ||||||| ||| ||||||
Sbjct: 27  aatggcggaatacttagcttcaatttttggaactgaaaaggataaggtaaactgc 81
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>tpd|BR000129.1| TPA: TPA_exp: Ciona intestinalis Ci-ZF(C3H)-16 mRNA for zinc finger
           protein, partial cds
          Length = 1103

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 148 aatggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgc 202
           |||||||||| |||| |||||||||||||| || || ||||||| ||| ||||||
Sbjct: 15  aatggcggaatacttagcttcaatttttggaactgaaaaggataaggtaaactgc 69
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>emb|CR942436.2| Xenopus tropicalis finished cDNA, clone TEgg079l20
          Length = 971

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                       
Query: 182 gagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcatggggat 241
           |||||||| | ||| |||||| | |||||||| ||||||||||| || || ||||| || 
Sbjct: 37  gagaaggacaaggttaactgctcattttactttaagattggagcatgtcgccatggagac 96

                                 
Query: 242 cgttgctcccgtctgcacaaca 263
           || |||||||| || |||||||
Sbjct: 97  cgatgctcccgacttcacaaca 118
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>gb|BC108558.1| Xenopus laevis cDNA clone MGC:131026 IMAGE:7980196, complete cds
          Length = 1403

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 72/88 (81%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggcacggagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcat 235
           ||||| || ||||| | ||| |||||| | |||||||| ||||||||||| || || |||
Sbjct: 93  ggcaccgaaaaggacaaggttaactgctcattttactttaagattggagcatgtcgccat 152

                                       
Query: 236 ggggatcgttgctcccgtctgcacaaca 263
           || || || |||||||| || |||||||
Sbjct: 153 ggagaccgatgctcccggcttcacaaca 180
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>gb|AC010919.11| Drosophila melanogaster clone BACR32K23, complete sequence
          Length = 198967

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 407   gaggagctgagcaagttcggcgag 430
             ||||||||||||||||||||||||
Sbjct: 39298 gaggagctgagcaagttcggcgag 39321
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>ref|NM_167474.1| Drosophila melanogaster CG8909-RB (CG8909), mRNA
          Length = 6724

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 407 gaggagctgagcaagttcggcgag 430
           ||||||||||||||||||||||||
Sbjct: 229 gaggagctgagcaagttcggcgag 252
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>gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 of 74 of the complete
              sequence
          Length = 303344

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 407    gaggagctgagcaagttcggcgag 430
              ||||||||||||||||||||||||
Sbjct: 207212 gaggagctgagcaagttcggcgag 207235
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>gb|DQ217298.1| Taeniopygia guttata clone 0058P0033A02 RIKEN cDNA 2510006D16
           variant 1-like mRNA, complete sequence
          Length = 889

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggcacggagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcat 235
           ||||| |||||||| |  ||||||||| | ||||| ||||| ||||||||||| || |||
Sbjct: 71  ggcaccgagaaggacaaagtcaactgctcattttatttcaaaattggagcttgtcgccat 130

             
Query: 236 gg 237
           ||
Sbjct: 131 gg 132
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>gb|DQ214380.1| Taeniopygia guttata clone 0058P0057E11 U2 snRNP auxiliary factor
           small subunit variant 1-like mRNA, complete sequence
          Length = 867

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggcacggagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcat 235
           ||||| |||||||| |  ||||||||| | ||||| ||||| ||||||||||| || |||
Sbjct: 49  ggcaccgagaaggacaaagtcaactgctcattttatttcaaaattggagcttgtcgccat 108

             
Query: 236 gg 237
           ||
Sbjct: 109 gg 110
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>gb|DQ214379.1| Taeniopygia guttata clone 0061P0015E02 U2 snRNP auxiliary factor
           small subunit variant 1-like mRNA, complete sequence
          Length = 864

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggcacggagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcat 235
           ||||| |||||||| |  ||||||||| | ||||| ||||| ||||||||||| || |||
Sbjct: 46  ggcaccgagaaggacaaagtcaactgctcattttatttcaaaattggagcttgtcgccat 105

             
Query: 236 gg 237
           ||
Sbjct: 106 gg 107
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>gb|DQ214378.1| Taeniopygia guttata clone 0058P0001H12 U2 snRNP auxiliary factor
           small subunit variant 1-like mRNA, complete sequence
          Length = 867

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggcacggagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcat 235
           ||||| |||||||| |  ||||||||| | ||||| ||||| ||||||||||| || |||
Sbjct: 49  ggcaccgagaaggacaaagtcaactgctcattttatttcaaaattggagcttgtcgccat 108

             
Query: 236 gg 237
           ||
Sbjct: 109 gg 110
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>gb|DQ214377.1| Taeniopygia guttata clone 0058P0061E04 U2 snRNP auxiliary factor
           small subunit variant 1-like mRNA, complete sequence
          Length = 867

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 176 ggcacggagaaggatagggtcaactgccccttttacttcaagattggagcttgccgtcat 235
           ||||| |||||||| |  ||||||||| | ||||| ||||| ||||||||||| || |||
Sbjct: 49  ggcaccgagaaggacaaagtcaactgctcattttatttcaaaattggagcttgtcgccat 108

             
Query: 236 gg 237
           ||
Sbjct: 109 gg 110
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>ref|XM_365669.1| Magnaporthe grisea 70-15 hypothetical protein (MG02371.4) partial
            mRNA
          Length = 2010

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 406  cgaggagctgagcaagttcggc 427
            ||||||||||||||||||||||
Sbjct: 1263 cgaggagctgagcaagttcggc 1284
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>emb|CR711761.2|CNS0GC59 Tetraodon nigroviridis full-length cDNA
          Length = 865

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgc 202
           ||||||||| |||| || ||||||||||| || ||||| ||||  |||||||||
Sbjct: 17  atggcggaatacttagcatcaatttttgggacagagaaagataaagtcaactgc 70
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>emb|CR695788.2|CNS0FZTK Tetraodon nigroviridis full-length cDNA
          Length = 880

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 149 atggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgc 202
           ||||||||| |||| || ||||||||||| || ||||| ||||  |||||||||
Sbjct: 11  atggcggaatacttagcatcaatttttgggacagagaaagataaagtcaactgc 64
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>gb|BC003883.1| Mus musculus cDNA sequence BC003883, mRNA (cDNA clone MGC:6653
           IMAGE:3496988), complete cds
          Length = 1411

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 288 tgcttgctaacatgtaccagcggcctgatatgatcacccctggagttgat 337
           |||||||||| ||||| || || ||||||||||| || ||||| ||||||
Sbjct: 213 tgcttgctaatatgtatcaacgccctgatatgattactcctggtgttgat 262



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctc 249
           ||||||||||| ||||||||  | ||||| |||||||||||
Sbjct: 134 tacttcaagatcggagcttgtagacatggagatcgttgctc 174
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>ref|NM_001039663.1| Mus musculus cDNA sequence BC003883 (BC003883), mRNA
          Length = 1411

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 288 tgcttgctaacatgtaccagcggcctgatatgatcacccctggagttgat 337
           |||||||||| ||||| || || ||||||||||| || ||||| ||||||
Sbjct: 213 tgcttgctaatatgtatcaacgccctgatatgattactcctggtgttgat 262



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 209 tacttcaagattggagcttgccgtcatggggatcgttgctc 249
           ||||||||||| ||||||||  | ||||| |||||||||||
Sbjct: 134 tacttcaagatcggagcttgtagacatggagatcgttgctc 174
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>gb|AF182199.1|AF182199 Homo sapiens intersectin 2 short isoform (ITSN2) mRNA, complete
          cds
          Length = 4557

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 14 gctccgccgcgccgcctcagcc 35
          ||||||||||||||||||||||
Sbjct: 22 gctccgccgcgccgcctcagcc 1
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>gb|AF182198.1|AF182198 Homo sapiens intersectin 2 long isoform (ITSN2) mRNA, complete
          cds
          Length = 6091

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 14 gctccgccgcgccgcctcagcc 35
          ||||||||||||||||||||||
Sbjct: 22 gctccgccgcgccgcctcagcc 1
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>emb|CT033130.1| Platynereis dumerilii EST IB0AAA26BB03EM1
          Length = 867

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                       
Query: 148 aatggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgcccctt 207
           |||||| ||| | |||||||| |||||||| || || || ||||  ||||||||  ||||
Sbjct: 27  aatggccgaatatttggcttcgatttttggaaccgaaaaagataaagtcaactgttcctt 86

                             
Query: 208 ttacttcaagattggagc 225
            ||||||||||| |||||
Sbjct: 87  ctacttcaagatcggagc 104
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>emb|CT032570.1| Platynereis dumerilii EST IB0AAA36BC01EM1
          Length = 916

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                       
Query: 148 aatggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgcccctt 207
           |||||| ||| | |||||||| |||||||| || || || ||||  ||||||||  ||||
Sbjct: 27  aatggccgaatatttggcttcgatttttggaaccgaaaaagataaagtcaactgttcctt 86

                             
Query: 208 ttacttcaagattggagc 225
            ||||||||||| |||||
Sbjct: 87  ctacttcaagatcggagc 104
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 345     gtgtggctatagctccagagaagat 369
               ||||||||||||||||||| |||||
Sbjct: 1520403 gtgtggctatagctccagaaaagat 1520379
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>emb|CR715813.2|CNS0GF9T Tetraodon nigroviridis full-length cDNA
          Length = 857

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 150 tggcggaacacttggcttcaatttttggcacggagaaggatagggtcaactgc 202
           |||||||| |||| || ||||||||||| || ||||| ||||  |||||||||
Sbjct: 10  tggcggaatacttagcatcaatttttgggacagagaaagataaagtcaactgc 62
to top
>gb|U67066.1|DMU67066 Drosophila melanogaster U2 snRNP auxiliary factor (dU2AF38) mRNA,
           complete cds
          Length = 1380

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 159 acttggcttcaatttttggcacggagaaggatagggtcaactgccccttttacttcaaga 218
           ||||||| || |||||||||||||| ||||| | ||| |||||  | || ||||||||||
Sbjct: 264 acttggcatccatttttggcacggaaaaggacaaggtgaactgttcgttctacttcaaga 323

            
Query: 219 t 219
           |
Sbjct: 324 t 324
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>ref|NM_057860.3| Drosophila melanogaster U2 small nuclear riboprotein auxiliary
           factor 38 CG3582-RA (U2af38), mRNA
          Length = 1275

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 159 acttggcttcaatttttggcacggagaaggatagggtcaactgccccttttacttcaaga 218
           ||||||| || |||||||||||||| ||||| | ||| |||||  | || ||||||||||
Sbjct: 206 acttggcatccatttttggcacggaaaaggacaaggtgaactgttcgttctacttcaaga 265

            
Query: 219 t 219
           |
Sbjct: 266 t 266
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>gb|AY058537.1| Drosophila melanogaster LD24048 full length cDNA
          Length = 1254

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 159 acttggcttcaatttttggcacggagaaggatagggtcaactgccccttttacttcaaga 218
           ||||||| || |||||||||||||| ||||| | ||| |||||  | || ||||||||||
Sbjct: 182 acttggcatccatttttggcacggaaaaggacaaggtgaactgttcgttctacttcaaga 241

            
Query: 219 t 219
           |
Sbjct: 242 t 242
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>ref|XM_469532.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 513

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  ccgccgccgttctcccgctc 112
           ||||||||||||||||||||
Sbjct: 376 ccgccgccgttctcccgctc 357
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     cggatcgatcgagacgaccg 95
              ||||||||||||||||||||
Sbjct: 414331 cggatcgatcgagacgaccg 414350
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>ref|XM_363044.1| Magnaporthe grisea 70-15 hypothetical protein (MG08628.4) partial
           cds
          Length = 642

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 179 acggagaaggatagggtcaa 198
           ||||||||||||||||||||
Sbjct: 409 acggagaaggatagggtcaa 428
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 76      cggatcgatcgagacgaccg 95
               ||||||||||||||||||||
Sbjct: 3261869 cggatcgatcgagacgaccg 3261888
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 93       ccgccgccgttctcccgctc 112
                ||||||||||||||||||||
Sbjct: 28557832 ccgccgccgttctcccgctc 28557851
to top
>gb|BC049293.1| Xenopus laevis heparin cofactor II, mRNA (cDNA clone MGC:53936
           IMAGE:5570211), complete cds
          Length = 1829

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 369 tgcaggagcactttgaggac 388
           ||||||||||||||||||||
Sbjct: 92  tgcaggagcactttgaggac 111
to top
>gb|AY125326.1| Agathemera crassa 28S ribosomal RNA gene, partial sequence
          Length = 2346

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 ggatcgttgctcccgtctgc 257
           ||||||||||||||||||||
Sbjct: 875 ggatcgttgctcccgtctgc 894
to top
>ref|XM_791422.1| PREDICTED: Strongylocentrotus purpuratus similar to zn-finger, CCHC
            type and RNA-directed DNA polymerase  and Integrase,
            catalytic domain containing protein family member (1E419)
            (LOC591875), mRNA
          Length = 3954

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                        
Query: 209  tacttcaagattggagcttgccgtcatg 236
            ||||||||||||||||||| ||||||||
Sbjct: 2237 tacttcaagattggagctt-ccgtcatg 2211
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 76      cggatcgatcgagacgaccg 95
               ||||||||||||||||||||
Sbjct: 2991736 cggatcgatcgagacgaccg 2991755
to top
>gb|BC030625.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide
            N-acetylgalactosaminyltransferase-like 2, mRNA (cDNA
            clone IMAGE:4826118), complete cds
          Length = 2916

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 360  cagagaagatgcaggagcactttg 383
            ||||||||||||| ||||||||||
Sbjct: 1215 cagagaagatgcaagagcactttg 1238
to top
>gb|BC014789.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide
            N-acetylgalactosaminyltransferase-like 2, mRNA (cDNA
            clone MGC:17334 IMAGE:4212702), complete cds
          Length = 3528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 360  cagagaagatgcaggagcactttg 383
            ||||||||||||| ||||||||||
Sbjct: 2902 cagagaagatgcaagagcactttg 2925
to top
>emb|AJ291764.1|GGA291764 Gallus gallus mRNA for U2snRNP auxiliary factor small subunit class
           2, (U2AF1 gene)
          Length = 3428

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 206 ttttacttcaagattggagcttgccgtcatgg 237
           ||||| ||||| || |||||||||||||||||
Sbjct: 92  ttttatttcaaaatcggagcttgccgtcatgg 123
to top
>emb|AJ291763.1|GGA291763 Gallus gallus mRNA for U2snRNP auxiliary factor small subunit class
           1, (U2AF1 gene)
          Length = 1029

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 206 ttttacttcaagattggagcttgccgtcatgg 237
           ||||| ||||| || |||||||||||||||||
Sbjct: 92  ttttatttcaaaatcggagcttgccgtcatgg 123
to top
>emb|AJ291762.1|GGA291762 Gallus gallus U2AF1 gene for U2snRNP auxiliary factor small subunit,
            exons 1-8
          Length = 19121

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 206  ttttacttcaagattggagcttgccgtcatgg 237
            ||||| ||||| || |||||||||||||||||
Sbjct: 2222 ttttatttcaaaatcggagcttgccgtcatgg 2253
to top
>emb|CR749477.1| Homo sapiens mRNA; cDNA DKFZp781G1023 (from clone DKFZp781G1023)
          Length = 4756

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 378  actttgaggacttctatgaggata 401
            ||||||||||||||| ||||||||
Sbjct: 2313 actttgaggacttctttgaggata 2336
to top
>dbj|AK094780.1| Homo sapiens cDNA FLJ37461 fis, clone BRAWH2011294, weakly similar to
            POLYPEPTIDE N-ACETYLGALACTOSAMINYLTRANSFERASE (EC
            2.4.1.41)
          Length = 3105

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 360  cagagaagatgcaggagcactttg 383
            ||||||||||||| ||||||||||
Sbjct: 2524 cagagaagatgcaagagcactttg 2547
to top
>ref|NM_054110.2| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide
            N-acetylgalactosaminyltransferase-like 2 (GALNTL2), mRNA
          Length = 3580

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 360  cagagaagatgcaggagcactttg 383
            ||||||||||||| ||||||||||
Sbjct: 2982 cagagaagatgcaagagcactttg 3005
to top
>gb|AY035399.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide
            N-acetylgalactosaminyltransferase 7 (GALNT7) mRNA,
            complete cds
          Length = 3357

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 360  cagagaagatgcaggagcactttg 383
            ||||||||||||| ||||||||||
Sbjct: 2760 cagagaagatgcaagagcactttg 2783
to top
>emb|AJ291765.1|GGA291765 Gallus gallus mRNA for U2snRNP auxiliary factor small subunit class
           3, (truncated), (U2AF1 gene)
          Length = 3530

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 206 ttttacttcaagattggagcttgccgtcatgg 237
           ||||| ||||| || |||||||||||||||||
Sbjct: 70  ttttatttcaaaatcggagcttgccgtcatgg 101
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 93       ccgccgccgttctcccgctc 112
                ||||||||||||||||||||
Sbjct: 28649156 ccgccgccgttctcccgctc 28649175
to top
>gb|AC008279.3| Homo sapiens BAC clone RP11-427F22 from 2, complete sequence
          Length = 157258

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 378   actttgaggacttctatgaggata 401
             ||||||||||||||| ||||||||
Sbjct: 61692 actttgaggacttctttgaggata 61715
to top
>ref|NM_204655.1| Gallus gallus U2snRNP auxiliary factor small subunit (truncated)
           (U2AF1), mRNA
          Length = 3530

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 206 ttttacttcaagattggagcttgccgtcatgg 237
           ||||| ||||| || |||||||||||||||||
Sbjct: 70  ttttatttcaaaatcggagcttgccgtcatgg 101
to top
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete
              sequence
          Length = 158839

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     ccgccgccgttctcccgctc 112
              ||||||||||||||||||||
Sbjct: 141064 ccgccgccgttctcccgctc 141045
to top
>gb|AC090953.2| Homo sapiens chromosome 3 clone RP11-608O8 map 3p, complete sequence
          Length = 189961

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 360    cagagaagatgcaggagcactttg 383
              ||||||||||||| ||||||||||
Sbjct: 104098 cagagaagatgcaagagcactttg 104121
to top
>gb|AC090948.2| Homo sapiens chromosome 3 clone RP11-415F23 map 3p, complete sequence
          Length = 179729

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 360  cagagaagatgcaggagcactttg 383
            ||||||||||||| ||||||||||
Sbjct: 8181 cagagaagatgcaagagcactttg 8204
to top
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0455H03
          Length = 175947

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ccgctccgccgcgccgcctc 31
             ||||||||||||||||||||
Sbjct: 23498 ccgctccgccgcgccgcctc 23517
to top
>dbj|BS000025.1| Pan troglodytes chromosome 22 clone:PTB-017K18, map 22, complete
             sequences
          Length = 144566

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   gccaactattgtgcttgcta 296
             ||||||||||||||||||||
Sbjct: 68974 gccaactattgtgcttgcta 68993
to top
>dbj|AK060373.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-C05, full
           insert sequence
          Length = 673

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  ccgccgccgttctcccgctc 112
           ||||||||||||||||||||
Sbjct: 413 ccgccgccgttctcccgctc 394
to top
>emb|AL832575.2|HSM803884 Homo sapiens mRNA; cDNA DKFZp451D2416 (from clone DKFZp451D2416)
          Length = 5703

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 360  cagagaagatgcaggagcactttg 383
            ||||||||||||| ||||||||||
Sbjct: 2454 cagagaagatgcaagagcactttg 2477
to top
>gb|AF061727.1|AF061727 Xenopus laevis heparin cofactor II mRNA, complete cds
          Length = 1844

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 369 tgcaggagcactttgaggac 388
           ||||||||||||||||||||
Sbjct: 104 tgcaggagcactttgaggac 123
to top
>emb|AL831925.1|HSM803261 Homo sapiens mRNA; cDNA DKFZp313I2220 (from clone DKFZp313I2220);
            complete cds
          Length = 3580

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 360  cagagaagatgcaggagcactttg 383
            ||||||||||||| ||||||||||
Sbjct: 2982 cagagaagatgcaagagcactttg 3005


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,484,972
Number of Sequences: 3902068
Number of extensions: 3484972
Number of successful extensions: 63573
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 63009
Number of HSP's gapped (non-prelim): 560
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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