>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 241     ggagaaactcgtccccgtcggc 262
               ||||||||||||||||||||||
Sbjct: 1220378 ggagaaactcgtccccgtcggc 1220357

>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0086N07 map S790A, complete sequence
          Length = 178523

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    ccatccacaaatccacaaat 56
             ||||||||||||||||||||
Sbjct: 40701 ccatccacaaatccacaaat 40720

>ref|XM_811021.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509669.50) partial mRNA
          Length = 5199

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 286  tggccttgacgtcgtcgaag 305
            ||||||||||||||||||||
Sbjct: 3243 tggccttgacgtcgtcgaag 3262

>ref|XM_797664.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509621.10) partial mRNA
          Length = 2620

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 286  tggccttgacgtcgtcgaag 305
            ||||||||||||||||||||
Sbjct: 2203 tggccttgacgtcgtcgaag 2222

>emb|AL158151.16| Human DNA sequence from clone RP11-247A12 on chromosome 9 Contains the
              CRAT gene for carnitine acetyltransferase (CAT1), the
              PPP2R4 gene for protein phosphatase 2A, regulatory subunit
              B' (PR 53) (PTPA), the IER5L gene for immediate early
              response 5-like, a novel gene and three CpG islands,
              complete sequence
          Length = 162445

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     ccatcctcttatccatccac 44
              ||||||||||||||||||||
Sbjct: 140399 ccatcctcttatccatccac 140418

>emb|AL138781.13| Human DNA sequence from clone RP11-83N9 on chromosome 9p34.1-35.1
              Contains a novel gene (LOC90120), the LHX3 gene for LIM
              homeobox protein 3, the gene for a novel protein
              (DKFZp762A2013) similar to quiescin proteins and seven CpG
              islands, complete sequence
          Length = 154918

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 263    gaggggtcgagcaggcagcagggt 286
              ||||||||||| ||||||||||||
Sbjct: 113356 gaggggtcgagaaggcagcagggt 113379

>emb|AL035706.10|HS836J3 Human DNA sequence from clone RP5-836J3 on chromosome 1p22.1-31.1
             Contains a novel gene (FLJ40403), the 3' end of the gene
             for a novel protein containing a tubulin-tyrosine ligase
             family domain (FLJ44842, FLJ23033 and FLJ36855) and a
             novel gene, complete sequence
          Length = 143590

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   agcaggtgtctcccctgcca 409
             ||||||||||||||||||||
Sbjct: 29153 agcaggtgtctcccctgcca 29134

>gb|AC011478.3| Homo sapiens chromosome 19 clone CTC-565M22, complete sequence
          Length = 100147

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 391   gcaggtgtctcccctgccacgcca 414
             |||||||||||||||| |||||||
Sbjct: 87518 gcaggtgtctcccctgacacgcca 87495

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 35       atccatccacaaatccacaa 54
                ||||||||||||||||||||
Sbjct: 20926110 atccatccacaaatccacaa 20926129



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 110      ccgccgctgctcccttcctgccgc 133
                |||||||||||||||||| |||||
Sbjct: 19455728 ccgccgctgctcccttccggccgc 19455705

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 37       ccatccacaaatccacaaat 56
                ||||||||||||||||||||
Sbjct: 13143379 ccatccacaaatccacaaat 13143360

>gb|AC157497.3| Pan troglodytes BAC clone CH251-490K17 from chromosome unknown,
             complete sequence
          Length = 207664

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    ccatcctcttatccatccac 44
             ||||||||||||||||||||
Sbjct: 86956 ccatcctcttatccatccac 86975



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    ccatcctcttatccatccac 44
             ||||||||||||||||||||
Sbjct: 86788 ccatcctcttatccatccac 86807

>gb|AF188738.1|AF188738S1 Homo sapiens LHX3 gene, intron 1a
          Length = 1775

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 263  gaggggtcgagcaggcagcagggt 286
            ||||||||||| ||||||||||||
Sbjct: 1453 gaggggtcgagaaggcagcagggt 1430

>dbj|AK109551.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A03, full
            insert sequence
          Length = 1325

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   atccatccacaaatccacaa 54
            ||||||||||||||||||||
Sbjct: 1200 atccatccacaaatccacaa 1181

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 37       ccatccacaaatccacaaat 56
                ||||||||||||||||||||
Sbjct: 13223558 ccatccacaaatccacaaat 13223539

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 35       atccatccacaaatccacaa 54
                ||||||||||||||||||||
Sbjct: 20852324 atccatccacaaatccacaa 20852343



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 110      ccgccgctgctcccttcctgccgc 133
                |||||||||||||||||| |||||
Sbjct: 19381955 ccgccgctgctcccttccggccgc 19381932

>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 182172

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    atccatccacaaatccacaa 54
             ||||||||||||||||||||
Sbjct: 11600 atccatccacaaatccacaa 11619

>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 107819

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    atccatccacaaatccacaa 54
             ||||||||||||||||||||
Sbjct: 32885 atccatccacaaatccacaa 32866

>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 163490

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    ccgccgctgctcccttcctgccgc 133
              |||||||||||||||||| |||||
Sbjct: 133422 ccgccgctgctcccttccggccgc 133399

>emb|CT010588.10| Mouse DNA sequence from clone RP23-150H18 on chromosome 12, complete
              sequence
          Length = 158004

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     cccatcctcttatccatcca 43
              ||||||||||||||||||||
Sbjct: 123060 cccatcctcttatccatcca 123041

>gb|AC115744.9| Mus musculus chromosome 12, clone RP23-479M19, complete sequence
          Length = 211776

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     cccatcctcttatccatcca 43
              ||||||||||||||||||||
Sbjct: 180970 cccatcctcttatccatcca 180951


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,464,557
Number of Sequences: 3902068
Number of extensions: 3464557
Number of successful extensions: 61749
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61527
Number of HSP's gapped (non-prelim): 222
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)