ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart51d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550206.1| Oryza sativa (japonica cultivar-group), mRNA 101 2e-18
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
3dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
4dbj|AK072658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
5dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
6gb|AY104312.1| Zea mays PCO074362 mRNA sequence 96 1e-16
7dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 44 0.35
8emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete ch... 42 1.4
9gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.4
10gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 5.4
11ref|XM_470681.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
12gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 5.4
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.4
14emb|AJ488769.2|AFR488769 Actinoplanes firuliensis partial friuli... 40 5.4
15gb|AF522240.1| Caloglossa postiae isolate MK1061 28S ribosomal R... 40 5.4
16gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genom... 40 5.4
17emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ... 40 5.4
18emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4,... 40 5.4
19gb|AF319543.1| Streptomyces venezuelae putative acetyl-CoA acety... 40 5.4
20dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.4
21gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 5.4
22dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
23dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
24gb|AC092135.4| Homo sapiens chromosome 16 clone RP11-274A11, com... 40 5.4
25dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
26gb|AC092139.5| Homo sapiens chromosome 16 clone RP11-391L3, comp... 40 5.4
27gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genom... 40 5.4
28gb|AY117439.1| Streptomyces carzinostaticus subsp. neocarzinosta... 40 5.4
29dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
30dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.4
31gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.4
32dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.4
33dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.4
34dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
35dbj|AK120076.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
36dbj|AK109278.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
37dbj|AK104973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
38dbj|AK072558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
39dbj|AK058642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
40gb|AY104688.1| Zea mays PCO061445 mRNA sequence 40 5.4
41emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4,... 40 5.4
42dbj|AB029754.1| Paralichthys olivaceus mRNA for chymotrypsinogen... 40 5.4 
>ref|XM_550206.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1134

 Score =  101 bits (51), Expect = 2e-18
 Identities = 115/135 (85%), Gaps = 6/135 (4%)
 Strand = Plus / Plus

                                                                       
Query: 271 gccaagggctgcgccgacggggtccccgtcgtcatgggcgagccggtcgccgcccccgcc 330
           |||||| |||||||||| || ||||||||||| |||||||||||| |||  || ||||| 
Sbjct: 271 gccaagtgctgcgccgatggagtccccgtcgttatgggcgagccgctcggggcacccgc- 329

                                                                       
Query: 331 ggtgacgcgccacgggacagctgggactcggggatcctctcctgcctcggccgcaacgac 390
               || |||| ||||| |||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 330 ----ac-cgccgcgggagagctggaactcgggggtgctctcctgcctcggccgcaacgac 384

                          
Query: 391 gacttctgcagcagc 405
           || ||||||||||||
Sbjct: 385 gagttctgcagcagc 399
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  101 bits (51), Expect = 2e-18
 Identities = 115/135 (85%), Gaps = 6/135 (4%)
 Strand = Plus / Plus

                                                                           
Query: 271     gccaagggctgcgccgacggggtccccgtcgtcatgggcgagccggtcgccgcccccgcc 330
               |||||| |||||||||| || ||||||||||| |||||||||||| |||  || ||||| 
Sbjct: 3043757 gccaagtgctgcgccgatggagtccccgtcgttatgggcgagccgctcggggcacccgc- 3043815

                                                                           
Query: 331     ggtgacgcgccacgggacagctgggactcggggatcctctcctgcctcggccgcaacgac 390
                   || |||| ||||| |||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 3043816 ----ac-cgccgcgggagagctggaactcgggggtgctctcctgcctcggccgcaacgac 3043870

                              
Query: 391     gacttctgcagcagc 405
               || ||||||||||||
Sbjct: 3043871 gagttctgcagcagc 3043885



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 179      tcgccatgggcgccgccgac 198
                ||||||||||||||||||||
Sbjct: 33201435 tcgccatgggcgccgccgac 33201416
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>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0011G08
          Length = 139490

 Score =  101 bits (51), Expect = 2e-18
 Identities = 115/135 (85%), Gaps = 6/135 (4%)
 Strand = Plus / Plus

                                                                          
Query: 271    gccaagggctgcgccgacggggtccccgtcgtcatgggcgagccggtcgccgcccccgcc 330
              |||||| |||||||||| || ||||||||||| |||||||||||| |||  || ||||| 
Sbjct: 125274 gccaagtgctgcgccgatggagtccccgtcgttatgggcgagccgctcggggcacccgc- 125332

                                                                          
Query: 331    ggtgacgcgccacgggacagctgggactcggggatcctctcctgcctcggccgcaacgac 390
                  || |||| ||||| |||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 125333 ----ac-cgccgcgggagagctggaactcgggggtgctctcctgcctcggccgcaacgac 125387

                             
Query: 391    gacttctgcagcagc 405
              || ||||||||||||
Sbjct: 125388 gagttctgcagcagc 125402
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>dbj|AK072658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134D11, full
           insert sequence
          Length = 1134

 Score =  101 bits (51), Expect = 2e-18
 Identities = 115/135 (85%), Gaps = 6/135 (4%)
 Strand = Plus / Plus

                                                                       
Query: 271 gccaagggctgcgccgacggggtccccgtcgtcatgggcgagccggtcgccgcccccgcc 330
           |||||| |||||||||| || ||||||||||| |||||||||||| |||  || ||||| 
Sbjct: 271 gccaagtgctgcgccgatggagtccccgtcgttatgggcgagccgctcggggcacccgc- 329

                                                                       
Query: 331 ggtgacgcgccacgggacagctgggactcggggatcctctcctgcctcggccgcaacgac 390
               || |||| ||||| |||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 330 ----ac-cgccgcgggagagctggaactcgggggtgctctcctgcctcggccgcaacgac 384

                          
Query: 391 gacttctgcagcagc 405
           || ||||||||||||
Sbjct: 385 gagttctgcagcagc 399
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>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score =  101 bits (51), Expect = 2e-18
 Identities = 115/135 (85%), Gaps = 6/135 (4%)
 Strand = Plus / Plus

                                                                         
Query: 271   gccaagggctgcgccgacggggtccccgtcgtcatgggcgagccggtcgccgcccccgcc 330
             |||||| |||||||||| || ||||||||||| |||||||||||| |||  || ||||| 
Sbjct: 11797 gccaagtgctgcgccgatggagtccccgtcgttatgggcgagccgctcggggcacccgc- 11855

                                                                         
Query: 331   ggtgacgcgccacgggacagctgggactcggggatcctctcctgcctcggccgcaacgac 390
                 || |||| ||||| |||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 11856 ----ac-cgccgcgggagagctggaactcgggggtgctctcctgcctcggccgcaacgac 11910

                            
Query: 391   gacttctgcagcagc 405
             || ||||||||||||
Sbjct: 11911 gagttctgcagcagc 11925
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>gb|AY104312.1| Zea mays PCO074362 mRNA sequence
          Length = 2610

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 107/126 (84%), Gaps = 3/126 (2%)
 Strand = Plus / Plus

                                                                        
Query: 283  gccgacggggtccccgtcgtcatgggcgagccggtcgccgcccccgcc---ggtgacgcg 339
            |||||||||||||| ||||| ||||||||||| ||  | |||| ||||   || | ||  
Sbjct: 1708 gccgacggggtcccggtcgtgatgggcgagcccgtgtcggcccacgccttcggcggcgtc 1767

                                                                        
Query: 340  ccacgggacagctgggactcggggatcctctcctgcctcggccgcaacgacgacttctgc 399
            || ||||| |||||| |||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 1768 ccgcgggagagctggaactccgggatcctctcctgcctcggccgcaacgacgagttctgc 1827

                  
Query: 400  agcagc 405
            ||||||
Sbjct: 1828 agcagc 1833



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 177  tctcgccatgggcgccgccgacgagcaccacgaggaggcaagccccctc 225
            ||||||||||||||||| || | |  ||||||||||| | |||||||||
Sbjct: 1584 tctcgccatgggcgccggcgccaacaaccacgaggagtcgagccccctc 1632
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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 174    gcctctcgccatgggcgccgccgacg 199
              ||||| ||||||||||||||||||||
Sbjct: 679256 gcctcccgccatgggcgccgccgacg 679281
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>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12
          Length = 306650

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   atgggcgagccggtcgccgcc 324
             |||||||||||||||||||||
Sbjct: 24508 atgggcgagccggtcgccgcc 24528
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 187     ggcgccgccgacgagcaccacgagg 211
               |||||||||| ||||||||||||||
Sbjct: 1101545 ggcgccgccgccgagcaccacgagg 1101521
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 173     cgcctctcgccatgggcgccgccg 196
               ||||||| ||||||||||||||||
Sbjct: 1204694 cgcctctggccatgggcgccgccg 1204717
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>ref|XM_470681.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 365 tcctctcctgcctcggccgc 384
           ||||||||||||||||||||
Sbjct: 411 tcctctcctgcctcggccgc 392
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 245     agaagctccccccggcgcag 264
               ||||||||||||||||||||
Sbjct: 1553553 agaagctccccccggcgcag 1553572
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 365      tcctctcctgcctcggccgc 384
                ||||||||||||||||||||
Sbjct: 14517437 tcctctcctgcctcggccgc 14517418
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>emb|AJ488769.2|AFR488769 Actinoplanes firuliensis partial friulimicin biosynthetic gene
            cluster
          Length = 15457

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 374  gcctcggccgcaacgacgacttct 397
            ||||||||||| ||||||||||||
Sbjct: 3207 gcctcggccgcgacgacgacttct 3230
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>gb|AF522240.1| Caloglossa postiae isolate MK1061 28S ribosomal RNA gene, partial
            sequence
          Length = 1631

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 207  cgaggaggcaagccccctct 226
            ||||||||||||||||||||
Sbjct: 1236 cgaggaggcaagccccctct 1217
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>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete
              sequence
          Length = 147130

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    tcctctcctgcctcggccgc 384
              ||||||||||||||||||||
Sbjct: 140270 tcctctcctgcctcggccgc 140289
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>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   gggcgagccggtcgccgccc 325
             ||||||||||||||||||||
Sbjct: 71194 gggcgagccggtcgccgccc 71213
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>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01,
              complete sequence
          Length = 143157

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 318    cgccgcccccgccggtgacgcgcc 341
              ||||||| ||||||||||||||||
Sbjct: 126363 cgccgccgccgccggtgacgcgcc 126386
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>gb|AF319543.1| Streptomyces venezuelae putative acetyl-CoA acetyltransferase and
            cystathionine beta-synthase (CbsSV) genes, complete cds
          Length = 6927

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  gggcgagccggtcgccgccc 325
            ||||||||||||||||||||
Sbjct: 5713 gggcgagccggtcgccgccc 5732
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 305     tgggcgagccggtcgccgcc 324
               ||||||||||||||||||||
Sbjct: 1557156 tgggcgagccggtcgccgcc 1557137
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 268     cccgccaagggctgcgccga 287
               ||||||||||||||||||||
Sbjct: 2184286 cccgccaagggctgcgccga 2184305
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 318      cgccgcccccgccggtgacgcgcc 341
                ||||||| ||||||||||||||||
Sbjct: 30147387 cgccgccgccgccggtgacgcgcc 30147410



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 318      cgccgcccccgccggtgacgcgcc 341
                ||||||| ||||||||||||||||
Sbjct: 30086684 cgccgccgccgccggtgacgcgcc 30086707
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 318      cgccgcccccgccggtgacgcgcc 341
                ||||||| ||||||||||||||||
Sbjct: 15872773 cgccgccgccgccggtgacgcgcc 15872750
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>gb|AC092135.4| Homo sapiens chromosome 16 clone RP11-274A11, complete sequence
          Length = 185193

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    gatcctctcctgcctcggcc 382
              ||||||||||||||||||||
Sbjct: 113027 gatcctctcctgcctcggcc 113008
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 365      tcctctcctgcctcggccgc 384
                ||||||||||||||||||||
Sbjct: 14512412 tcctctcctgcctcggccgc 14512393
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>gb|AC092139.5| Homo sapiens chromosome 16 clone RP11-391L3, complete sequence
          Length = 191731

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 363  gatcctctcctgcctcggcc 382
            ||||||||||||||||||||
Sbjct: 2455 gatcctctcctgcctcggcc 2436
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>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete
             sequence
          Length = 135594

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   tcctctcctgcctcggccgc 384
             ||||||||||||||||||||
Sbjct: 23944 tcctctcctgcctcggccgc 23963
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>gb|AY117439.1| Streptomyces carzinostaticus subsp. neocarzinostaticus
            neocarzinostatin biosynthetic locus, complete sequence
          Length = 92294

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  gcgccgccgacgagcaccac 207
            ||||||||||||||||||||
Sbjct: 4198 gcgccgccgacgagcaccac 4217
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>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1100D10
          Length = 152997

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    tcgccatgggcgccgccgac 198
              ||||||||||||||||||||
Sbjct: 138345 tcgccatgggcgccgccgac 138326
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 314     cggtcgccgcccccgccggt 333
               ||||||||||||||||||||
Sbjct: 8010115 cggtcgccgcccccgccggt 8010096
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 189     cgccgccgacgagcaccacg 208
               ||||||||||||||||||||
Sbjct: 3163415 cgccgccgacgagcaccacg 3163434
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 300     cgtcatgggcgagccggtcg 319
               ||||||||||||||||||||
Sbjct: 3046970 cgtcatgggcgagccggtcg 3046951
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 195     cgacgagcaccacgaggagg 214
               ||||||||||||||||||||
Sbjct: 1369581 cgacgagcaccacgaggagg 1369600
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>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1081_G10
          Length = 107955

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 318   cgccgcccccgccggtgacgcgcc 341
             ||||||| ||||||||||||||||
Sbjct: 35899 cgccgccgccgccggtgacgcgcc 35876
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>dbj|AK120076.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013010M02, full
           insert sequence
          Length = 1270

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 318 cgccgcccccgccggtgacgcgcc 341
           ||||||| ||||||||||||||||
Sbjct: 135 cgccgccgccgccggtgacgcgcc 112
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>dbj|AK109278.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B02, full
           insert sequence
          Length = 549

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 179 tcgccatgggcgccgccgac 198
           ||||||||||||||||||||
Sbjct: 86  tcgccatgggcgccgccgac 105
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>dbj|AK104973.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-B03, full
           insert sequence
          Length = 994

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 318 cgccgcccccgccggtgacgcgcc 341
           ||||||| ||||||||||||||||
Sbjct: 386 cgccgccgccgccggtgacgcgcc 363
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>dbj|AK072558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131I21, full
           insert sequence
          Length = 916

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 318 cgccgcccccgccggtgacgcgcc 341
           ||||||| ||||||||||||||||
Sbjct: 399 cgccgccgccgccggtgacgcgcc 376
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>dbj|AK058642.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-E05, full
           insert sequence
          Length = 1353

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 318 cgccgcccccgccggtgacgcgcc 341
           ||||||| ||||||||||||||||
Sbjct: 108 cgccgccgccgccggtgacgcgcc 85
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>gb|AY104688.1| Zea mays PCO061445 mRNA sequence
          Length = 991

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 325 cccgccggtgacgcgccacg 344
           ||||||||||||||||||||
Sbjct: 142 cccgccggtgacgcgccacg 123
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>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12,
             complete sequence
          Length = 186142

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 318   cgccgcccccgccggtgacgcgcc 341
             ||||||| ||||||||||||||||
Sbjct: 43795 cgccgccgccgccggtgacgcgcc 43818
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>dbj|AB029754.1| Paralichthys olivaceus mRNA for chymotrypsinogen 2, complete cds
          Length = 875

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 360 ggggatcctctcctgcctcg 379
           ||||||||||||||||||||
Sbjct: 3   ggggatcctctcctgcctcg 22


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,982,002
Number of Sequences: 3902068
Number of extensions: 2982002
Number of successful extensions: 64360
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62953
Number of HSP's gapped (non-prelim): 1407
length of query: 405
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 383
effective length of database: 17,147,199,772
effective search space: 6567377512676
effective search space used: 6567377512676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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