ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart51d05 |
|---|---|
| Clone Library Name | barley_pub |
>OM34_MOUSE (Q9CYG7) Mitochondrial import receptor subunit TOM34 (Translocase| of outer membrane 34 kDa subunit) Length = 309 Score = 38.5 bits (88), Expect = 0.008 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 280 KARSQANDAKAEGNKHFAAGEYEDALSKYEIALQIAAELESSE-DISSACHSNRAVCFL 453 K +A GN++F G+Y +A + YE AL++ S++ + S +SNRA C+L Sbjct: 4 KVSDSVEQLRAAGNQNFRNGQYGEASALYERALRLLQARGSADPEEESVLYSNRAACYL 62 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +1 Query: 292 QANDAKAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRAVCFL 453 +A K EGN G ++ A+ KY +L ++ + SA +SNRA+C L Sbjct: 192 RAKALKEEGNDLVKKGNHKKAIEKYSESLLCSS-------LESATYSNRALCHL 238
>SPAG1_HUMAN (Q07617) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (HSD-3.8) Length = 926 Score = 37.4 bits (85), Expect = 0.018 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 2/51 (3%) Frame = +1 Query: 307 KAEGNKHFAAGEYEDALSKYE--IALQIAAELESSEDISSACHSNRAVCFL 453 K++GN+ F +G++ +A KY IAL A E ++D+ S +SNRA C+L Sbjct: 449 KSQGNELFRSGQFAEAAGKYSAAIALLEPAGSEIADDL-SILYSNRAACYL 498 Score = 33.5 bits (75), Expect = 0.26 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +1 Query: 307 KAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRAVCFL 453 K EGN+ Y+DALSKY L+I + A ++NRA+C+L Sbjct: 627 KEEGNQCVNDKNYKDALSKYSECLKI-------NNTECAIYTNRALCYL 668
>TOM70_MOUSE (Q9CZW5) Mitochondrial precursor proteins import receptor| (Translocase of outer membrane TOM70) Length = 611 Score = 37.0 bits (84), Expect = 0.023 Identities = 22/60 (36%), Positives = 33/60 (55%) Frame = +1 Query: 271 LREKARSQANDAKAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRAVCF 450 L + A AK +GNK+F AG+YE A+ Y A+ + E + D+S+ + NRA F Sbjct: 109 LEMSSLDSAQAAKNKGNKYFKAGKYEQAIQCYTEAISL-CPTEKNVDLST-FYQNRAAAF 166
>TOM70_HUMAN (O94826) Mitochondrial precursor proteins import receptor| (Translocase of outer membrane TOM70) Length = 608 Score = 37.0 bits (84), Expect = 0.023 Identities = 21/53 (39%), Positives = 32/53 (60%) Frame = +1 Query: 292 QANDAKAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRAVCF 450 +A AK +GNK+F AG+YE A+ Y A+ + E + D+S+ + NRA F Sbjct: 113 RAQAAKNKGNKYFKAGKYEQAIQCYTEAISL-CPTEKNVDLST-FYQNRAAAF 163
>OM34_HUMAN (Q15785) Mitochondrial import receptor subunit TOM34 (Translocase| of outer membrane 34 kDa subunit) (hTom34) Length = 309 Score = 35.4 bits (80), Expect = 0.067 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = +1 Query: 280 KARSQANDAKAEGNKHFAAGEYEDALSKYEIALQI-AAELESSEDISSACHSNRAVCFL 453 K + +A GN+ F G+Y +A + Y AL++ A+ S + S +SNRA C L Sbjct: 4 KFPDSVEELRAAGNESFRNGQYAEASALYGRALRVLQAQGSSDPEEESVLYSNRAACHL 62 Score = 32.7 bits (73), Expect = 0.44 Identities = 18/54 (33%), Positives = 30/54 (55%) Frame = +1 Query: 292 QANDAKAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRAVCFL 453 +A K EGN+ G ++ A+ KY +L + ++ SA +SNRA+C+L Sbjct: 192 KARVLKEEGNELVKKGNHKKAIEKYSESLLCS-------NLESATYSNRALCYL 238
>TTC1_MOUSE (Q91Z38) Tetratricopeptide repeat protein 1 (TPR repeat protein 1)| Length = 292 Score = 35.0 bits (79), Expect = 0.088 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = +1 Query: 274 REKARSQANDAKAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRA 441 ++K R ++ K EGN+ F G+Y +A S Y ALQ+ + S SNRA Sbjct: 109 KQKRREESAKLKEEGNERFKRGDYMEAESSYSQALQMCPACFQKD--RSVLFSNRA 162
>TTC1_HUMAN (Q99614) Tetratricopeptide repeat protein 1 (TPR repeat protein 1)| Length = 292 Score = 35.0 bits (79), Expect = 0.088 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = +1 Query: 274 REKARSQANDAKAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRA 441 ++K R ++ K EGN+ F G+Y +A S Y AL++ E S SNRA Sbjct: 109 KQKRREESTRLKEEGNEQFKKGDYIEAESSYSRALEMCPSCFQKE--RSILFSNRA 162
>SPAG1_MOUSE (Q80ZX8) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (TPR-containing protein involved in spermatogenesis) (TPIS) Length = 901 Score = 33.5 bits (75), Expect = 0.26 Identities = 18/49 (36%), Positives = 29/49 (59%) Frame = +1 Query: 307 KAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRAVCFL 453 K EGN+ Y+DA+SKY L+I ++ + A ++NRA+C+L Sbjct: 610 KEEGNQLVKDKNYKDAISKYNECLKINSK-------ACAIYTNRALCYL 651 Score = 29.6 bits (65), Expect = 3.7 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +1 Query: 271 LREKARS-QANDAKAEGNKHFAAGEYEDALSKYEIAL 378 L EK +S AN K +GN+ F +G+YE+A+ Y +L Sbjct: 204 LTEKEKSFLANREKGKGNEAFYSGDYEEAVMYYTRSL 240
>SPAG1_RAT (Q5U2X2) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (HSD-3.8) Length = 893 Score = 33.5 bits (75), Expect = 0.26 Identities = 18/49 (36%), Positives = 29/49 (59%) Frame = +1 Query: 307 KAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRAVCFL 453 K EGN+ Y+DA+SKY L+I ++ + A ++NRA+C+L Sbjct: 609 KEEGNQLVKDKNYKDAISKYNECLKINSK-------ACAIYTNRALCYL 650 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +1 Query: 271 LREKARS-QANDAKAEGNKHFAAGEYEDALSKYEIAL 378 L EK ++ AN K +GN+ F +G+YE+A+ Y +L Sbjct: 204 LTEKEKNFLANREKGKGNEAFYSGDYEEAVMYYTRSL 240
>FKB70_ARATH (Q38931) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8)| (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (Peptidylprolyl isomerase ROF1) Length = 551 Score = 32.0 bits (71), Expect = 0.74 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 8/67 (11%) Frame = +1 Query: 277 EKARSQANDAKAEGNKHFAAGEYEDALSKYEIALQI--------AAELESSEDISSACHS 432 E+ A+ K EGN F G+Y A +YE A++ E + ++ + AC+ Sbjct: 394 EEKIEAASKKKEEGNSKFKGGKYSLASKRYEKAVKFIEYDTSFSEEEKKQAKALKVACNL 453 Query: 433 NRAVCFL 453 N A C L Sbjct: 454 NDAACKL 460
>SGT2_YEAST (Q12118) Small glutamine-rich tetratricopeptide repeat-containing| protein 2 (Viral protein U-binding protein) (SGT/UBP) Length = 346 Score = 31.6 bits (70), Expect = 0.97 Identities = 13/35 (37%), Positives = 24/35 (68%) Frame = +1 Query: 280 KARSQANDAKAEGNKHFAAGEYEDALSKYEIALQI 384 + +++A D K +GNK A +YE A++KY A+++ Sbjct: 97 ETKAKAEDLKMQGNKAMANKDYELAINKYTEAIKV 131
>AIPL1_SAIBB (Q95MN7) Aryl-hydrocarbon-interacting protein-like 1| Length = 372 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 313 EGNKHFAAGEYEDALSKYEIALQIAAELESSE 408 EGN+ F G YE+A SKY+ A+ L++ E Sbjct: 184 EGNRLFKLGRYEEASSKYQEAIICLRNLQTKE 215
>AIPL1_PAPCY (Q95MN8) Aryl-hydrocarbon-interacting protein-like 1| Length = 372 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 313 EGNKHFAAGEYEDALSKYEIALQIAAELESSE 408 EGN+ F G YE+A SKY+ A+ L++ E Sbjct: 184 EGNRLFKLGRYEEASSKYQEAIICLRNLQTKE 215
>AIPL1_MACMU (Q95MP0) Aryl-hydrocarbon-interacting protein-like 1| Length = 392 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 313 EGNKHFAAGEYEDALSKYEIALQIAAELESSE 408 EGN+ F G YE+A SKY+ A+ L++ E Sbjct: 184 EGNRLFKLGRYEEASSKYQEAIICLRNLQTKE 215
>AIPL1_PANPA (Q95MN9) Aryl-hydrocarbon-interacting protein-like 1| Length = 384 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 313 EGNKHFAAGEYEDALSKYEIALQIAAELESSE 408 EGN+ F G YE+A SKY+ A+ L++ E Sbjct: 184 EGNRLFKLGRYEEASSKYQEAIICLRNLQTKE 215
>AIPL1_HUMAN (Q9NZN9) Aryl-hydrocarbon-interacting protein-like 1| Length = 384 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 313 EGNKHFAAGEYEDALSKYEIALQIAAELESSE 408 EGN+ F G YE+A SKY+ A+ L++ E Sbjct: 184 EGNRLFKLGRYEEASSKYQEAIICLRNLQTKE 215
>FKB70_WHEAT (Q43207) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8)| (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) Length = 559 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 8/61 (13%) Frame = +1 Query: 295 ANDAKAEGNKHFAAGEYEDALSKYEIALQIAA--------ELESSEDISSACHSNRAVCF 450 A K EGN F +G+Y A +YE A + E + S+ + C+ N A C Sbjct: 401 AGTKKEEGNALFKSGKYARASKRYEKAAKFIEYDTSFSEDEKKQSKQLKITCNLNNAACK 460 Query: 451 L 453 L Sbjct: 461 L 461
>STIP1_RAT (O35814) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) Length = 543 Score = 31.2 bits (69), Expect = 1.3 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = +1 Query: 292 QANDAKAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRAVCF 450 Q N+ K +GNK +AG +DAL Y A+++ + + +SNR+ + Sbjct: 3 QVNELKEKGNKALSAGNIDDALQCYSEAIKLDPQ-------NHVLYSNRSAAY 48
>STIP1_MOUSE (Q60864) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) (mSTI1) Length = 543 Score = 31.2 bits (69), Expect = 1.3 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = +1 Query: 292 QANDAKAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRAVCF 450 Q N+ K +GNK +AG +DAL Y A+++ + + +SNR+ + Sbjct: 3 QVNELKEKGNKALSAGNIDDALQCYSEAIKLDPQ-------NHVLYSNRSAAY 48
>STIP1_CRIGR (O54981) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) Length = 543 Score = 31.2 bits (69), Expect = 1.3 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = +1 Query: 292 QANDAKAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRAVCF 450 Q N+ K +GNK +AG +DAL Y A+++ + + +SNR+ + Sbjct: 3 QVNELKEKGNKALSAGNIDDALQCYSEAIKLDPQ-------NHVLYSNRSAAY 48
>CYP40_ARATH (Q9C566) Peptidyl-prolyl cis-trans isomerase CYP40 (EC 5.2.1.8)| (PPIase CYP40) (Rotamase CYP40) (Cyclophilin-40) (Cyclophilin of 40 kDa) (Protein SQUINT) Length = 361 Score = 30.4 bits (67), Expect = 2.2 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Frame = +1 Query: 307 KAEGNKHFAAGEYEDALSKYEIALQ---IAAELES-SEDISSACHSNRAVCF 450 KA GN+HF +Y+ AL KY AL+ I E E E+ S+A ++ F Sbjct: 216 KAHGNEHFKKQDYKMALRKYRKALRYLDICWEKEGIDEETSTALRKTKSQIF 267
>STI1_YEAST (P15705) Heat shock protein STI1| Length = 589 Score = 30.4 bits (67), Expect = 2.2 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 11/67 (16%) Frame = +1 Query: 277 EKARSQANDAKAEGNKHFAAGEYEDALSKYEIALQI-----------AAELESSEDISSA 423 + ++ +A+ KAEGNK + A ++++A+ Y A ++ AAE E E ++ Sbjct: 256 DDSKIEADKEKAEGNKFYKARQFDEAIEHYNKAWELHKDITYLNNRAAAEYEKGEYETAI 315 Query: 424 CHSNRAV 444 N AV Sbjct: 316 STLNDAV 322
>AIPL1_BOVIN (Q95MP1) Aryl-hydrocarbon-interacting protein-like 1| Length = 328 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +1 Query: 313 EGNKHFAAGEYEDALSKYEIALQIAAELESSE 408 EGN+ F G YE+A +KY+ A+ L++ E Sbjct: 184 EGNRLFKLGRYEEASNKYQEAIVCLRNLQTKE 215
>TTC12_HUMAN (Q9H892) Tetratricopeptide repeat protein 12 (TPR repeat protein| 12) Length = 705 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/60 (26%), Positives = 31/60 (51%) Frame = +1 Query: 274 REKARSQANDAKAEGNKHFAAGEYEDALSKYEIALQIAAELESSEDISSACHSNRAVCFL 453 R + + A+ K +GN+ FA G YE A+ +Y L+ +++ ++NRA ++ Sbjct: 99 RRENKVLADALKEKGNEAFAEGNYETAILRYSEGLEKLKDMK-------VLYTNRAQAYM 151
>STIP1_HUMAN (P31948) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) (Transformation-sensitive protein IEF SSP 3521) (NY-REN-11 antigen) Length = 543 Score = 29.3 bits (64), Expect = 4.8 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +1 Query: 292 QANDAKAEGNKHFAAGEYEDALSKYEIALQI 384 Q N+ K +GNK + G +DAL Y A+++ Sbjct: 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKL 33
>FKBP4_MOUSE (P30416) FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) (p59 protein) (HSP-binding immunophilin) (HBI) (FKBP52 protein) (52 kDa FK506-binding protein) (FKBP59) Length = 457 Score = 28.9 bits (63), Expect = 6.3 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 8/62 (12%) Frame = +1 Query: 292 QANDAKAEGNKHFAAGEYEDALSKYEIALQ--------IAAELESSEDISSACHSNRAVC 447 Q+N K G +F G+Y+ AL +Y+ + E++ + A H N A+C Sbjct: 268 QSNIVKERGTAYFKEGKYKQALLQYKKIVSWLEYESSFSGEEMQKVHALRLASHLNLAMC 327 Query: 448 FL 453 L Sbjct: 328 HL 329
>Y856_MIMIV (Q5UQQ7) Putative TPR repeat-containing protein R856| Length = 342 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 Query: 337 GEYEDALSKYEIALQIAAELESSEDISSACHSNR 438 G Y++ALSKY AL+I +L I +A NR Sbjct: 133 GNYDEALSKYNEALEINEKLYGRNHIETAFVLNR 166
>TMPA_TREPA (P07643) Treponemal membrane protein A precursor (Antigen tmpA)| (Membrane protein A) Length = 345 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 292 QANDAKAEGNKHFAAGEYEDALSKYEI 372 Q+ DAK EG+ AAG +A KYEI Sbjct: 80 QSTDAKIEGDLKKAAGVASEAADKYEI 106
>PPID_NEUCR (Q9P3X9) 41 kDa peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-41) (CYP-41) Length = 375 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +1 Query: 295 ANDAKAEGNKHFAAGEYEDALSKYEIALQIAAE 393 A D K GNK F AG+ AL KY+ L+ E Sbjct: 222 ATDCKDFGNKAFKAGDLPVALDKYQKGLRYLNE 254
>FKB42_ARATH (Q9LDC0) 42 kDa peptidyl-prolyl isomerase (EC 5.2.1.8)| (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (Protein TWISTED DWARF1) (Protein ULTRACURVATA2) Length = 365 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 10/69 (14%) Frame = +1 Query: 277 EKARSQANDAKAEGNKHFAAGEYEDALSKYEIALQIAAE----------LESSEDISSAC 426 E+ A+ K +GN F + E+A+ +YE+A+ + + + + + C Sbjct: 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPC 232 Query: 427 HSNRAVCFL 453 H N A C + Sbjct: 233 HLNIAACLI 241 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.127 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,613,881 Number of Sequences: 219361 Number of extensions: 369690 Number of successful extensions: 1077 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1031 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1073 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
