ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart51d03 |
|---|---|
| Clone Library Name | barley_pub |
>ATHB7_ARATH (P46897) Homeobox-leucine zipper protein ATHB-7 (Homeodomain| transcription factor ATHB-7) (HD-ZIP protein ATHB-7) Length = 258 Score = 124 bits (311), Expect = 1e-28 Identities = 60/89 (67%), Positives = 73/89 (82%) Frame = +2 Query: 197 KKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRAR 376 KK + ++RFS+EQIKSLE MF ++T+LEPR+K+QLARELGLQPRQVAIWFQNKRAR Sbjct: 24 KKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRAR 83 Query: 377 WKSKQLERQYAALRDDYDALLSSYDQLKK 463 WKSKQLE +Y LR +YD L S ++ LKK Sbjct: 84 WKSKQLETEYNILRQNYDNLASQFESLKK 112
>HAT5_ARATH (Q02283) Homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5)| (HD-ZIP protein ATHB-1) Length = 272 Score = 108 bits (269), Expect = 9e-24 Identities = 48/80 (60%), Positives = 63/80 (78%) Frame = +2 Query: 218 DRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 397 ++K+R + EQ+ LE F T+ KLEP +K QLA++LGLQPRQVA+WFQN+RARWK+KQLE Sbjct: 67 EKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 126 Query: 398 RQYAALRDDYDALLSSYDQL 457 R Y L+ YD LLS+YD + Sbjct: 127 RDYDLLKSTYDQLLSNYDSI 146
>ATHB5_ARATH (P46667) Homeobox-leucine zipper protein ATHB-5 (HD-ZIP protein| ATHB-5) Length = 312 Score = 105 bits (262), Expect = 6e-23 Identities = 48/90 (53%), Positives = 65/90 (72%) Frame = +2 Query: 194 GKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRA 373 G ++K+R EQ+K+LE F KLEP +K++LA+ELGLQPRQVAIWFQN+RA Sbjct: 63 GHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRA 122 Query: 374 RWKSKQLERQYAALRDDYDALLSSYDQLKK 463 RWK+KQLER Y L+ ++DAL + D L++ Sbjct: 123 RWKTKQLERDYGVLKSNFDALKRNRDSLQR 152
>ATHB6_ARATH (P46668) Homeobox-leucine zipper protein ATHB-6 (Homeodomain| transcription factor ATHB-6) (HD-ZIP protein ATHB-6) Length = 311 Score = 105 bits (261), Expect = 7e-23 Identities = 45/82 (54%), Positives = 65/82 (79%) Frame = +2 Query: 218 DRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 397 ++K+R S Q+K+LE F + KLEP +K++LA+ELGLQPRQVA+WFQN+RARWK+KQLE Sbjct: 61 EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 120 Query: 398 RQYAALRDDYDALLSSYDQLKK 463 + Y L+ YD+L ++D L++ Sbjct: 121 KDYGVLKTQYDSLRHNFDSLRR 142
>HAT7_ARATH (Q00466) Homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7)| (HD-ZIP protein ATHB-3) Length = 314 Score = 101 bits (252), Expect = 8e-22 Identities = 46/80 (57%), Positives = 61/80 (76%) Frame = +2 Query: 218 DRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 397 ++KKR + EQ+++LE F KLEP +K+QLA+ LGLQPRQ+AIWFQN+RARWK+KQLE Sbjct: 114 EKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLE 173 Query: 398 RQYAALRDDYDALLSSYDQL 457 R Y +L+ +D L S D L Sbjct: 174 RDYDSLKKQFDVLKSDNDSL 193
>HAT1_ARATH (P46600) Homeobox-leucine zipper protein HAT1 (HD-ZIP protein 1)| Length = 282 Score = 66.6 bits (161), Expect = 3e-11 Identities = 37/87 (42%), Positives = 49/87 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG +K R S++Q LE F L P+QKL LA++LGL RQV +WFQN+RAR K Sbjct: 129 GGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTK 188 Query: 383 SKQLERQYAALRDDYDALLSSYDQLKK 463 KQ E L+ + L +L+K Sbjct: 189 LKQTEVDCEYLKRCVEKLTEENRRLEK 215
>HAT22_ARATH (P46604) Homeobox-leucine zipper protein HAT22 (HD-ZIP protein 22)| Length = 278 Score = 66.6 bits (161), Expect = 3e-11 Identities = 36/86 (41%), Positives = 50/86 (58%) Frame = +2 Query: 206 GVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKS 385 GV +K R +++Q LE F + L P+QK LAR+L L+PRQV +WFQN+RAR K Sbjct: 121 GVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKL 180 Query: 386 KQLERQYAALRDDYDALLSSYDQLKK 463 KQ E L+ + L +L+K Sbjct: 181 KQTEVDCEFLKKCCETLTDENRRLQK 206
>HAT14_ARATH (P46665) Homeobox-leucine zipper protein HAT14 (HD-ZIP protein 14)| Length = 336 Score = 66.2 bits (160), Expect = 4e-11 Identities = 34/81 (41%), Positives = 50/81 (61%) Frame = +2 Query: 221 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 400 +K R S++Q LE F + L P+QK+ LA++L L+PRQV +WFQN+RAR K KQ E Sbjct: 190 KKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEV 249 Query: 401 QYAALRDDYDALLSSYDQLKK 463 L+ ++L +L+K Sbjct: 250 DCEYLKRCCESLTEENRRLQK 270
>HAT9_ARATH (P46603) Homeobox-leucine zipper protein HAT9 (Homeodomain-leucine| zipper protein HAT9) (Homeodomain transcription factor HAT9) (HD-ZIP protein 9) Length = 274 Score = 65.9 bits (159), Expect = 5e-11 Identities = 35/86 (40%), Positives = 50/86 (58%) Frame = +2 Query: 206 GVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKS 385 G+ +K R +++Q LE F + L P+QK LAR+L L+PRQV +WFQN+RAR K Sbjct: 108 GISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKL 167 Query: 386 KQLERQYAALRDDYDALLSSYDQLKK 463 KQ E L+ + L +L+K Sbjct: 168 KQTEVDCEFLKKCCETLADENIRLQK 193
>HHEX_HUMAN (Q03014) Homeobox protein PRH (Hematopoietically expressed| homeobox) (Homeobox protein HEX) Length = 270 Score = 64.3 bits (155), Expect = 1e-10 Identities = 35/90 (38%), Positives = 52/90 (57%) Frame = +2 Query: 185 PASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 P +KGG + RFS +Q LE F TQ L P ++ +LA+ L L RQV WFQN Sbjct: 133 PLHKRKGGQV-----RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQN 187 Query: 365 KRARWKSKQLERQYAALRDDYDALLSSYDQ 454 +RA+W+ + E + +++ ++L SS DQ Sbjct: 188 RRAKWRRLKQENPQSNKKEELESLDSSCDQ 217
>ATHB4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-ZIP protein| ATHB-4) Length = 318 Score = 64.3 bits (155), Expect = 1e-10 Identities = 35/81 (43%), Positives = 48/81 (59%) Frame = +2 Query: 221 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 400 +K R S++Q LE F + L P+QKL LA++L L+ RQV +WFQN+RAR K KQ E Sbjct: 163 KKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEV 222 Query: 401 QYAALRDDYDALLSSYDQLKK 463 L+ D L +L+K Sbjct: 223 DCEYLKRCCDNLTEENRRLQK 243
>HAT4_ARATH (Q05466) Homeobox-leucine zipper protein HAT4 (HD-ZIP protein 4)| (HD-ZIP protein ATHB-2) Length = 284 Score = 63.9 bits (154), Expect = 2e-10 Identities = 35/81 (43%), Positives = 48/81 (59%) Frame = +2 Query: 221 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 400 +K R S++Q LE F + L P+QK LA++LGL+ RQV +WFQN+RAR K KQ E Sbjct: 129 KKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEV 188 Query: 401 QYAALRDDYDALLSSYDQLKK 463 LR + L +L+K Sbjct: 189 DCEFLRRCCENLTEENRRLQK 209
>HAT2_ARATH (P46601) Homeobox-leucine zipper protein HAT2 (HD-ZIP protein 2)| Length = 283 Score = 63.9 bits (154), Expect = 2e-10 Identities = 36/87 (41%), Positives = 48/87 (55%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG +K R S++Q LE F L P+QKL LA++L L RQV +WFQN+RAR K Sbjct: 124 GGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTK 183 Query: 383 SKQLERQYAALRDDYDALLSSYDQLKK 463 KQ E L+ + L +L+K Sbjct: 184 LKQTEVDCEYLKRCVEKLTEENRRLQK 210
>HHEX_MOUSE (P43120) Homeobox protein PRH (Hematopoietically expressed| homeobox) (Homeobox protein HEX) Length = 271 Score = 63.5 bits (153), Expect = 2e-10 Identities = 35/90 (38%), Positives = 51/90 (56%) Frame = +2 Query: 185 PASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 P +KGG + RFS +Q LE F TQ L P ++ +LA+ L L RQV WFQN Sbjct: 134 PLHKRKGGQV-----RFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQN 188 Query: 365 KRARWKSKQLERQYAALRDDYDALLSSYDQ 454 +RA+W+ + E + +D D+L +S +Q Sbjct: 189 RRAKWRRLKQENPQSNKKDALDSLDTSCEQ 218
>HAT3_ARATH (P46602) Homeobox-leucine zipper protein HAT3 (HD-ZIP protein 3)| Length = 315 Score = 63.2 bits (152), Expect = 3e-10 Identities = 34/81 (41%), Positives = 48/81 (59%) Frame = +2 Query: 221 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 400 +K R S+EQ LE F + L P+QK+ LA++L L+ RQV +WFQN+RAR K KQ E Sbjct: 162 KKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEV 221 Query: 401 QYAALRDDYDALLSSYDQLKK 463 L+ + L +L+K Sbjct: 222 DCEYLKRCCENLTDENRRLQK 242
>HHEX_CHICK (Q05502) Homeobox protein PRH (Hematopoietically expressed| homeobox) Length = 277 Score = 60.1 bits (144), Expect = 3e-09 Identities = 34/94 (36%), Positives = 49/94 (52%) Frame = +2 Query: 185 PASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 P +KGG + RFS EQ LE F TQ L P ++ +LA+ L L RQV WFQN Sbjct: 140 PLHKRKGGQV-----RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQN 194 Query: 365 KRARWKSKQLERQYAALRDDYDALLSSYDQLKKG 466 +RA+W+ + E A +++ + D +G Sbjct: 195 RRAKWRRLKQENPQATKKEEAEGTGDHGDPRSEG 228
>HGL2_ARATH (P46607) Homeobox protein GLABRA2 (Homeobox-leucine zipper protein| ATHB-10) (HD-ZIP protein ATHB-10) Length = 745 Score = 58.9 bits (141), Expect = 6e-09 Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%) Frame = +2 Query: 188 ASGKKGGVMIDRKK--RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQ 361 A+G KG RKK R + +QI+ +E++F + +Q+ QL+++LGL PRQV WFQ Sbjct: 89 AAGNKGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFWFQ 148 Query: 362 NKRARWKSKQLERQYAALRDDYDAL 436 N+R + K+ Q + + L+ + + L Sbjct: 149 NRRTQIKAIQERHENSLLKAELEKL 173
>HOXE_CHICK (Q91975) Homeobox protein CHOX-E (CHOX E) (Fragment)| Length = 157 Score = 55.8 bits (133), Expect = 5e-08 Identities = 32/86 (37%), Positives = 49/86 (56%) Frame = +2 Query: 191 SGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 S K I R+ FSE+Q K+LE MF Q + + +LA LGL+ QV IWFQN+R Sbjct: 2 SNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRR 61 Query: 371 ARWKSKQLERQYAALRDDYDALLSSY 448 +W++ + E++ + R + L +Y Sbjct: 62 MKWRNSK-EKEVLSNRCLQEGLQENY 86
>BAGP_DROME (P22809) Homeobox protein bagpipe (NK-3)| Length = 382 Score = 54.3 bits (129), Expect = 2e-07 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 4/74 (5%) Frame = +2 Query: 206 GVMIDRKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRA 373 G + RKKR FS Q+ LE FA Q L ++ ++A+ L L QV IWFQN+R Sbjct: 169 GSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRY 228 Query: 374 RWKSKQLERQYAAL 415 + K KQ+++ AAL Sbjct: 229 KTKRKQIQQHEAAL 242
>MEOX2_XENLA (P39021) Homeobox protein MOX-2| Length = 298 Score = 54.3 bits (129), Expect = 2e-07 Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK+R F++EQI+ LE+ FA L ++ ++A L L RQV +WFQN+R +WK + Sbjct: 182 RKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 241 Query: 395 ERQYAALRD 421 +Q AA R+ Sbjct: 242 GQQGAAARE 250
>MEOX2_HUMAN (P50222) Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth| arrest-specific homeobox) Length = 304 Score = 54.3 bits (129), Expect = 2e-07 Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK+R F++EQI+ LE+ FA L ++ ++A L L RQV +WFQN+R +WK + Sbjct: 188 RKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 247 Query: 395 ERQYAALRD 421 +Q AA R+ Sbjct: 248 GQQGAAARE 256
>MEOX2_RAT (P39020) Homeobox protein MOX-2 (Growth arrest-specific homeobox)| Length = 303 Score = 54.3 bits (129), Expect = 2e-07 Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK+R F++EQI+ LE+ FA L ++ ++A L L RQV +WFQN+R +WK + Sbjct: 187 RKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 246 Query: 395 ERQYAALRD 421 +Q AA R+ Sbjct: 247 GQQGAAARE 255
>MEOX2_MOUSE (P32443) Homeobox protein MOX-2 (Mesenchyme homeobox 2)| Length = 303 Score = 54.3 bits (129), Expect = 2e-07 Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK+R F++EQI+ LE+ FA L ++ ++A L L RQV +WFQN+R +WK + Sbjct: 187 RKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 246 Query: 395 ERQYAALRD 421 +Q AA R+ Sbjct: 247 GQQGAAARE 255
>HME60_APIME (P09075) Homeobox protein E60 (Fragment)| Length = 109 Score = 53.9 bits (128), Expect = 2e-07 Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = +2 Query: 203 GGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRAR 376 GG +++ R FS EQ+ L+ FA L R++ QL+R+LGL Q+ IWFQNKRA+ Sbjct: 15 GGTPEEKRPRTAFSGEQLARLKREFAENRYLTERRRQQLSRDLGLNEAQIKIWFQNKRAK 74 Query: 377 WKSKQLERQYAALR 418 K ++ AL+ Sbjct: 75 IKKASGQKNPLALQ 88
>HME30_APIME (P09076) Homeobox protein E30 (Fragment)| Length = 109 Score = 53.5 bits (127), Expect = 3e-07 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Frame = +2 Query: 191 SGKKGGVMIDRKKR-FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 +GK G R + FS EQ+ L+ FA L R++ QL+R+LGL Q+ IWFQNK Sbjct: 12 NGKNGSPEEKRPRTAFSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQIKIWFQNK 71 Query: 368 RARWKSKQLERQYAALR 418 RA+ K ++ AL+ Sbjct: 72 RAKIKKASGQKNPLALQ 88
>MEOX1_MOUSE (P32442) Homeobox protein MOX-1 (Mesenchyme homeobox 1)| Length = 253 Score = 52.8 bits (125), Expect = 4e-07 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Frame = +2 Query: 194 GKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 GK G RK+R F++EQ++ LE+ FA L ++ ++A L L RQV +WFQN+ Sbjct: 162 GKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNR 221 Query: 368 RARWK 382 R +WK Sbjct: 222 RMKWK 226
>MEOX1_HUMAN (P50221) Homeobox protein MOX-1 (Mesenchyme homeobox 1)| Length = 254 Score = 52.8 bits (125), Expect = 4e-07 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Frame = +2 Query: 194 GKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 GK G RK+R F++EQ++ LE+ FA L ++ ++A L L RQV +WFQN+ Sbjct: 163 GKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNR 222 Query: 368 RARWK 382 R +WK Sbjct: 223 RMKWK 227
>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox| protein NK-1) Length = 659 Score = 52.0 bits (123), Expect = 8e-07 Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = +2 Query: 188 ASGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQ 361 + G GG R+ R F+ EQ+ SLE+ F T L ++L LA L L QV IWFQ Sbjct: 535 SGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQ 594 Query: 362 NKRARWKSK 388 N+R +WK + Sbjct: 595 NRRTKWKKQ 603
>HME2A_BRARE (P09015) Homeobox protein engrailed-2a (Zf-En-2) (Eng2)| Length = 265 Score = 51.2 bits (121), Expect = 1e-06 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%) Frame = +2 Query: 197 KKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 KK D++ R F+ EQ++ L++ F T L +++ LA+ELGL Q+ IWFQNKR Sbjct: 169 KKAASKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKR 228 Query: 371 ARWK 382 A+ K Sbjct: 229 AKIK 232
>HXC11_HUMAN (O43248) Homeobox protein Hox-C11| Length = 304 Score = 51.2 bits (121), Expect = 1e-06 Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Frame = +2 Query: 185 PASGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWF 358 PA G RKKR +S+ QI+ LE F + ++LQL+R L L RQV IWF Sbjct: 221 PAKGAAPNAPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWF 280 Query: 359 QNKRARWKSKQLER 400 QN+ R K K+L R Sbjct: 281 QNR--RMKEKKLSR 292
>HM30_CAEEL (Q22909) Homeobox protein ceh-30| Length = 299 Score = 51.2 bits (121), Expect = 1e-06 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = +2 Query: 194 GKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 G G RK R F+++Q++ LE+ F Q L + ++ LA +GL QV W+QN+ Sbjct: 149 GSPGSCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNR 208 Query: 368 RARWK 382 R +WK Sbjct: 209 RTKWK 213
>SMOX5_SCHMA (Q26604) Homeobox protein SMOX-5| Length = 284 Score = 50.8 bits (120), Expect = 2e-06 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK--SK 388 RK R FS Q+ LE+ F Q L P + ++A+ LGL QV WFQN+RA+ K ++ Sbjct: 38 RKTRTTFSNCQLNELENNFNRQRYLTPTDRDRIAKHLGLTNTQVITWFQNRRAKLKREAE 97 Query: 389 QLERQYAALR 418 +LER ALR Sbjct: 98 ELERDVMALR 107
>DBX1_MOUSE (P52950) Homeobox protein DBX1| Length = 335 Score = 50.8 bits (120), Expect = 2e-06 Identities = 27/68 (39%), Positives = 41/68 (60%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A GK M+ R+ FS+ Q K+LE F Q + + +LA +LGL+ QV IWFQN+ Sbjct: 174 ARGKPRRGML-RRAVFSDVQRKALEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNR 232 Query: 368 RARWKSKQ 391 R +W++ + Sbjct: 233 RMKWRNSK 240
>HME2B_XENLA (P52730) Homeobox protein engrailed-2-B (En-2B) (EN2 MABEN)| Length = 265 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Frame = +2 Query: 197 KKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 KK D++ R F+ EQ++ L++ F T L +++ LA+ELGL Q+ IWFQNKR Sbjct: 169 KKSVSKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKR 228 Query: 371 ARWKSKQLERQYAAL 415 A+ K + AL Sbjct: 229 AKIKKSTGNKNSLAL 243
>HM7X_CHICK (P15142) Homeobox protein CHOX-7 (Fragment)| Length = 124 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/66 (39%), Positives = 35/66 (53%) Frame = +2 Query: 185 PASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 P G G R+ F+ EQ+ LE F + L ++ Q+A L L QV IWFQN Sbjct: 15 PPPGSGAGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQN 74 Query: 365 KRARWK 382 +RA+WK Sbjct: 75 RRAKWK 80
>HM23_CAEEL (P34663) Homeobox protein ceh-23| Length = 305 Score = 50.8 bits (120), Expect = 2e-06 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK R + Q + LE MF Q + ++ LA+ LGL P QV IWFQN+R++ + KQ Sbjct: 212 RKARTIYGTTQTQQLEDMFKGQMYVVGAERENLAQRLGLSPSQVRIWFQNRRSKHRRKQQ 271 Query: 395 ERQYAALRDD 424 E Q + ++ Sbjct: 272 EEQQSTTLEE 281
>HXC8_MOUSE (P09025) Homeobox protein Hox-C8 (Hox-3.1) (M31)| Length = 242 Score = 50.4 bits (119), Expect = 2e-06 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A G++ G ++ +S Q LE F L +++++++ LGL RQV IWFQN+ Sbjct: 146 APGRRSG-----RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNR 200 Query: 368 RARWKSKQLERQYAALRDD 424 R +WK + + + RD+ Sbjct: 201 RMKWKKENNKDKLPGARDE 219
>HXC8_HUMAN (P31273) Homeobox protein Hox-C8 (Hox-3A)| Length = 242 Score = 50.4 bits (119), Expect = 2e-06 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A G++ G ++ +S Q LE F L +++++++ LGL RQV IWFQN+ Sbjct: 146 APGRRSG-----RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNR 200 Query: 368 RARWKSKQLERQYAALRDD 424 R +WK + + + RD+ Sbjct: 201 RMKWKKENNKDKLPGARDE 219
>HXC8_CHICK (Q9YH13) Homeobox protein Hox-C8 (cHoxc-8)| Length = 242 Score = 50.4 bits (119), Expect = 2e-06 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A G++ G ++ +S Q LE F L +++++++ LGL RQV IWFQN+ Sbjct: 146 APGRRSG-----RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNR 200 Query: 368 RARWKSKQLERQYAALRDD 424 R +WK + + + RD+ Sbjct: 201 RMKWKKENNKDKLPGARDE 219
>HXC8_RAT (P18866) Homeobox protein Hox-C8 (R4) (Fragment)| Length = 108 Score = 50.4 bits (119), Expect = 2e-06 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A G++ G ++ +S Q LE F L +++++++ LGL RQV IWFQN+ Sbjct: 12 APGRRSG-----RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNR 66 Query: 368 RARWKSKQLERQYAALRDD 424 R +WK + + + RD+ Sbjct: 67 RMKWKKENNKDKLPGARDE 85
>HD10_ENCCU (Q8SW18) Homeobox protein HD-10 (EcHD-10)| Length = 227 Score = 50.4 bits (119), Expect = 2e-06 Identities = 21/56 (37%), Positives = 35/56 (62%) Frame = +2 Query: 215 IDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 + +KR ++ Q+K LE F T + + + +L +LG+ PR V +WFQN+RA+ K Sbjct: 31 VKHRKRTTKAQLKVLEETFETNIRPDANMRKKLGEQLGMTPRSVQVWFQNRRAKIK 86
>HMEN_SCHAM (P14150) Segmentation polarity homeobox protein engrailed (G-EN)| (Fragment) Length = 93 Score = 50.4 bits (119), Expect = 2e-06 Identities = 25/50 (50%), Positives = 32/50 (64%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 FS EQ+ L+ F L R++ +LARELGL Q+ IWFQNKRA+ K Sbjct: 41 FSGEQLARLKHEFTENRYLTERRRQELARELGLNEAQIKIWFQNKRAKIK 90
>HME1A_BRARE (Q04896) Homeobox protein engrailed-1a (Eng1)| Length = 231 Score = 50.1 bits (118), Expect = 3e-06 Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%) Frame = +2 Query: 218 DRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 D++ R F+ EQ++ L++ F T + +++ LARELGL Q+ IWFQNKRA+ K Sbjct: 143 DKRPRTAFTAEQLQRLKAEFQTSRYITEQRRQALARELGLNESQIKIWFQNKRAKIK 199
>HMB3_TRIGR (P10178) Homeobox protein HB3 (Fragment)| Length = 108 Score = 50.1 bits (118), Expect = 3e-06 Identities = 23/65 (35%), Positives = 38/65 (58%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A GK+G ++ ++ +Q LE F + R++ ++A+ LGL RQ+ IWFQN+ Sbjct: 25 ADGKRG------RQTYTRQQTLELEKEFHFSRYVTRRRRFEIAQSLGLSERQIKIWFQNR 78 Query: 368 RARWK 382 R +WK Sbjct: 79 RMKWK 83
>GBX2_HUMAN (P52951) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) Length = 348 Score = 50.1 bits (118), Expect = 3e-06 Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 5/71 (7%) Frame = +2 Query: 185 PASGKKGGVMIDRKKR-----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVA 349 P+SG G K R F+ EQ+ LE F + L ++ Q+A L L QV Sbjct: 233 PSSGAAGSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVK 292 Query: 350 IWFQNKRARWK 382 IWFQN+RA+WK Sbjct: 293 IWFQNRRAKWK 303
>HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)| Length = 288 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%) Frame = +2 Query: 197 KKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 KK D++ R F+ EQ++ L++ F T L +++ LA+ELGL Q+ IWFQNKR Sbjct: 192 KKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKR 251 Query: 371 ARWK 382 A+ K Sbjct: 252 AKIK 255
>HXD8_HETFR (Q9IA12) Homeobox protein Hox-D8| Length = 240 Score = 50.1 bits (118), Expect = 3e-06 Identities = 25/79 (31%), Positives = 44/79 (55%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A G++ G ++ +S Q LE F L +++++++ LGL RQV IWFQN+ Sbjct: 144 APGRRRG-----RQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNR 198 Query: 368 RARWKSKQLERQYAALRDD 424 R +WK + + ++ R+D Sbjct: 199 RMKWKKENNKDKFPTSRND 217
>GBX1_HUMAN (Q14549) Homeobox protein GBX-1 (Gastrulation and brain-specific| homeobox protein 1) (Fragment) Length = 139 Score = 49.7 bits (117), Expect = 4e-06 Identities = 25/60 (41%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG R+ F+ EQ+ LE F + L ++ Q+A L L QV IWFQN+RA+WK Sbjct: 34 GGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 93
>GBX1_MOUSE (P82976) Homeobox protein GBX-1 (Gastrulation and brain-specific| homeobox protein 1) Length = 418 Score = 49.7 bits (117), Expect = 4e-06 Identities = 25/60 (41%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG R+ F+ EQ+ LE F + L ++ Q+A L L QV IWFQN+RA+WK Sbjct: 313 GGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 372
>HMB1_STRPU (P13545) Homeobox protein HB1 (SPHBOX1)| Length = 308 Score = 49.3 bits (116), Expect = 5e-06 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%) Frame = +2 Query: 185 PASGKKGGVMIDRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIW 355 P SG G+ + RK+ ++ Q LE F L R++++L+ LGL RQ+ IW Sbjct: 178 PVSGPNVGLEVGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIW 237 Query: 356 FQNKRARWKSKQLERQ 403 FQN+R ++K + ++ Sbjct: 238 FQNRRMKYKKESKNKE 253
>HMEN_ARTSF (Q05640) Homeobox protein engrailed| Length = 349 Score = 49.3 bits (116), Expect = 5e-06 Identities = 25/62 (40%), Positives = 35/62 (56%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 F+ EQ+ L+ F L R++ LARELGL Q+ IWFQN RA+ K ++ A Sbjct: 256 FTAEQLSRLKHEFNENRYLTERRRQDLARELGLHENQIKIWFQNNRAKLKKSSGQKNPLA 315 Query: 413 LR 418 L+ Sbjct: 316 LQ 317
>HXB8A_BRARE (Q8AWZ0) Homeobox protein Hox-B8a (Hox-B8)| Length = 245 Score = 49.3 bits (116), Expect = 5e-06 Identities = 23/83 (27%), Positives = 47/83 (56%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A+G++ G ++ +S Q LE F L +++++++ LGL RQV IWFQN+ Sbjct: 142 AAGRRRG-----RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNR 196 Query: 368 RARWKSKQLERQYAALRDDYDAL 436 R +WK + + ++ + + + + + Sbjct: 197 RMKWKKENNKDKFPSSKSEQEQI 219
>HMEN_BOMMO (P27609) Segmentation polarity homeobox protein engrailed| Length = 372 Score = 49.3 bits (116), Expect = 5e-06 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 8/86 (9%) Frame = +2 Query: 185 PASG------KKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPR 340 P+SG KK +++ R FS Q+ L+ FA L R++ LA ELGL Sbjct: 263 PSSGPRSRRVKKKAAPEEKRPRTAFSGAQLARLKHEFAENRYLTERRRQSLAAELGLAEA 322 Query: 341 QVAIWFQNKRARWKSKQLERQYAALR 418 Q+ IWFQNKRA+ K +R AL+ Sbjct: 323 QIKIWFQNKRAKIKKASGQRNPLALQ 348
>HMIN_DROME (P05527) Homeobox protein invected| Length = 576 Score = 49.3 bits (116), Expect = 5e-06 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Frame = +2 Query: 203 GGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRAR 376 GGV D++ R FS Q+ L+ F L +++ QL+ ELGL Q+ IWFQNKRA+ Sbjct: 466 GGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAK 525 Query: 377 WKSKQLERQYAALR 418 K + AL+ Sbjct: 526 LKKSSGTKNPLALQ 539
>HXD11_MOUSE (P23813) Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5)| Length = 323 Score = 48.9 bits (115), Expect = 6e-06 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 5/73 (6%) Frame = +2 Query: 197 KKGGVMI---DRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQ 361 K GG + RKKR +++ QI+ LE F + ++LQL+R L L RQV IWFQ Sbjct: 241 KSGGTVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQ 300 Query: 362 NKRARWKSKQLER 400 N+ R K K+L R Sbjct: 301 NR--RMKEKKLNR 311
>HXB8_MOUSE (P09632) Homeobox protein Hox-B8 (Hox-2.4)| Length = 243 Score = 48.9 bits (115), Expect = 6e-06 Identities = 24/83 (28%), Positives = 47/83 (56%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A+G++ G ++ +S Q LE F L +++++++ LGL RQV IWFQN+ Sbjct: 143 AAGRRRG-----RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNR 197 Query: 368 RARWKSKQLERQYAALRDDYDAL 436 R +WK + + ++ + + + + L Sbjct: 198 RMKWKKENNKDKFPSSKCEQEEL 220
>HXB8_HUMAN (P17481) Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4)| Length = 243 Score = 48.9 bits (115), Expect = 6e-06 Identities = 24/83 (28%), Positives = 47/83 (56%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A+G++ G ++ +S Q LE F L +++++++ LGL RQV IWFQN+ Sbjct: 143 AAGRRRG-----RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNR 197 Query: 368 RARWKSKQLERQYAALRDDYDAL 436 R +WK + + ++ + + + + L Sbjct: 198 RMKWKKENNKDKFPSSKCEQEEL 220
>HMIN_BOMMO (P27610) Homeobox protein invected| Length = 476 Score = 48.9 bits (115), Expect = 6e-06 Identities = 27/62 (43%), Positives = 35/62 (56%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 FS Q+ L+ FA L R++ LA ELGL Q+ IWFQNKRA+ K +R A Sbjct: 379 FSGPQLARLKHEFAENRYLTERRRQSLAAELGLAEAQIKIWFQNKRAKIKKASGQRNPLA 438 Query: 413 LR 418 L+ Sbjct: 439 LQ 440
>HXD12_HUMAN (P35452) Homeobox protein Hox-D12 (Hox-4H)| Length = 275 Score = 48.9 bits (115), Expect = 6e-06 Identities = 26/77 (33%), Positives = 42/77 (54%) Frame = +2 Query: 185 PASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 PA G G ++K ++++QI LE+ F + +++ +L+ L L +QV IWFQN Sbjct: 198 PAVGGGPGEARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQN 257 Query: 365 KRARWKSKQLERQYAAL 415 +R + K L Q AL Sbjct: 258 RRMKKKRVVLREQALAL 274
>EMS_APIME (P15858) Homeobox protein H40 (Fragment)| Length = 74 Score = 48.9 bits (115), Expect = 6e-06 Identities = 23/52 (44%), Positives = 32/52 (61%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 F+ EQ+ +LE+ F T L ++L LA L L QV IWFQN+R +WK + Sbjct: 15 FTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 66
>HM01_CAEEL (P53547) Homeobox protein ceh-1 (Fragment)| Length = 132 Score = 48.9 bits (115), Expect = 6e-06 Identities = 23/50 (46%), Positives = 32/50 (64%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 F+ EQ+ +LE+ F T L ++L LA +L L QV IWFQN+R +WK Sbjct: 8 FTYEQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKIWFQNRRTKWK 57
>LBX1_HUMAN (P52954) Transcription factor LBX1| Length = 280 Score = 48.9 bits (115), Expect = 6e-06 Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK R F+ QI LE F Q L P + Q+A++LGL QV WFQN+RA+ K ++L Sbjct: 125 RKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLK-REL 183 Query: 395 ERQYA 409 E A Sbjct: 184 EEMKA 188
>HMEN_DROVI (P09145) Segmentation polarity homeobox protein engrailed| Length = 584 Score = 48.9 bits (115), Expect = 6e-06 Identities = 26/62 (41%), Positives = 35/62 (56%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 FS EQ+ L+ F L R++ QL+ ELGL Q+ IWFQNKRA+ K + A Sbjct: 493 FSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKKSTGSKNPLA 552 Query: 413 LR 418 L+ Sbjct: 553 LQ 554
>HXDBA_BRARE (Q90470) Homeobox protein Hox-D11a (Hox-D11) (Hox-C11)| Length = 263 Score = 48.9 bits (115), Expect = 6e-06 Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +S+ QI+ LE F + ++LQL+R L L RQV IWFQN+ R K K+L Sbjct: 192 RKKRCPYSKYQIRELEREFFFNVYINKEKRLQLSRMLSLTDRQVKIWFQNR--RMKEKKL 249 Query: 395 ER 400 R Sbjct: 250 NR 251
>HMEN_DROME (P02836) Segmentation polarity homeobox protein engrailed| Length = 552 Score = 48.9 bits (115), Expect = 6e-06 Identities = 26/62 (41%), Positives = 35/62 (56%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 FS EQ+ L+ F L R++ QL+ ELGL Q+ IWFQNKRA+ K + A Sbjct: 461 FSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKKSTGSKNPLA 520 Query: 413 LR 418 L+ Sbjct: 521 LQ 522
>HM8_XENLA (P14837) Homeobox protein 8 (XlHbox-8)| Length = 271 Score = 48.5 bits (114), Expect = 8e-06 Identities = 23/76 (30%), Positives = 43/76 (56%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 ++ Q+ LE F + ++++LA L L R + IWFQN+R +WK ++ +++ Sbjct: 154 YTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEEDKKRGRG 213 Query: 413 LRDDYDALLSSYDQLK 460 + D+++SS D LK Sbjct: 214 SDPEQDSVVSSADVLK 229
>HXD8_CHICK (P23459) Homeobox protein Hox-D8 (Chox-M)| Length = 188 Score = 48.5 bits (114), Expect = 8e-06 Identities = 24/79 (30%), Positives = 44/79 (55%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A G++ G ++ +S Q LE F L +++++++ LGL RQV IWFQN+ Sbjct: 92 APGRRRG-----RQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNR 146 Query: 368 RARWKSKQLERQYAALRDD 424 R +WK + + ++ A + + Sbjct: 147 RMKWKKENNKDKFPASKQE 165
>VAX2_HUMAN (Q9UIW0) Ventral anterior homeobox 2| Length = 290 Score = 48.5 bits (114), Expect = 8e-06 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%) Frame = +2 Query: 206 GVMIDRKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRA 373 G+ +DR KR F+ EQ+ LE F + R++ +LAR+L L QV +WFQN+R Sbjct: 96 GLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRT 155 Query: 374 RWK---SKQLERQYAALRDDYDALLSSYDQLKKG 466 + K S+ LE++ ++ + A + L++G Sbjct: 156 KQKKDQSRDLEKRASSSASEAFATSNILRLLEQG 189
>VAX2_MOUSE (Q9WTP9) Ventral anterior homeobox 2 (Ventral retina homeodomain| protein) Length = 292 Score = 48.5 bits (114), Expect = 8e-06 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%) Frame = +2 Query: 206 GVMIDRKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRA 373 G+ +DR KR F+ EQ+ LE F + R++ +LAR+L L QV +WFQN+R Sbjct: 96 GLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRT 155 Query: 374 RWK---SKQLERQYAALRDDYDALLSSYDQLKKG 466 + K S+ LE++ ++ + A + L++G Sbjct: 156 KQKKDQSRDLEKRASSSASEAFATSNVLRLLEQG 189
>BARX2_MOUSE (O08686) Homeobox protein BarH-like 2| Length = 228 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/55 (41%), Positives = 31/55 (56%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 397 F+E Q+ LE F Q L +L LA+ LGL QV W+QN+R +WK L+ Sbjct: 119 FTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK 173
>GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) Length = 340 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = +2 Query: 221 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 R+ F+ EQ+ LE F + L ++ Q+A L L QV IWFQN+RA+WK Sbjct: 242 RRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 295
>VAX2_RAT (Q9JLZ9) Ventral anterior homeobox 2| Length = 292 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 4/66 (6%) Frame = +2 Query: 206 GVMIDRKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRA 373 G+ +DR KR F+ EQ+ LE F + R++ +LAR+L L QV +WFQN+R Sbjct: 96 GLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRT 155 Query: 374 RWKSKQ 391 + K Q Sbjct: 156 KQKKDQ 161
>BAX1B_CHICK (Q9DED6) Homeobox protein BarH-like 1b (Bar class homeoprotein| Barx1b) Length = 247 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/71 (35%), Positives = 35/71 (49%) Frame = +2 Query: 185 PASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 P +G K + F+E Q+ LE F Q L ++ LA LGL QV W+QN Sbjct: 126 PETGSKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQN 185 Query: 365 KRARWKSKQLE 397 +R +WK L+ Sbjct: 186 RRMKWKKIVLQ 196
>NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1| Length = 364 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 7/70 (10%) Frame = +2 Query: 200 KGGVMIDR-------KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWF 358 +G +++D+ + FS +QI +LE F L ++ +LA LG+ QV +WF Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284 Query: 359 QNKRARWKSK 388 QN+R +W+ K Sbjct: 285 QNRRTKWRKK 294
>GBX2_MOUSE (P48031) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) (Homeobox protein STRA7) Length = 348 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = +2 Query: 221 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 R+ F+ EQ+ LE F + L ++ Q+A L L QV IWFQN+RA+WK Sbjct: 250 RRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303
>NKX61_RAT (O35762) Homeobox protein Nkx-6.1| Length = 365 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 7/70 (10%) Frame = +2 Query: 200 KGGVMIDR-------KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWF 358 +G +++D+ + FS +QI +LE F L ++ +LA LG+ QV +WF Sbjct: 226 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 285 Query: 359 QNKRARWKSK 388 QN+R +W+ K Sbjct: 286 QNRRTKWRKK 295
>NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1| Length = 365 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 7/70 (10%) Frame = +2 Query: 200 KGGVMIDR-------KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWF 358 +G +++D+ + FS +QI +LE F L ++ +LA LG+ QV +WF Sbjct: 226 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 285 Query: 359 QNKRARWKSK 388 QN+R +W+ K Sbjct: 286 QNRRTKWRKK 295
>HXA4_MOUSE (P06798) Homeobox protein Hox-A4 (Hox-1.4) (MH-3)| Length = 285 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/64 (35%), Positives = 35/64 (54%) Frame = +2 Query: 191 SGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 S GG + ++ +Q+ LE F L R+++++A L L RQV IWFQN+R Sbjct: 173 SSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRR 232 Query: 371 ARWK 382 +WK Sbjct: 233 MKWK 236
>HNK2_XENLA (P42587) Homeobox protein XENK-2| Length = 196 Score = 48.1 bits (113), Expect = 1e-05 Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 3/134 (2%) Frame = +2 Query: 8 QAS*PPSSLARPHTRDPFCFFPFL-PTPDQVHDHRRDLAXXXXXXXXXXXXXXXXXXXXX 184 +AS P ++ RP R F P+ D+ D+ ++L+ Sbjct: 23 RASNTPCTVLRPEIRSRFLLLSLQKPSADESPDNDKELSSN------------------- 63 Query: 185 PASGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWF 358 P SGKK RK+R FS+ Q LE F Q L ++ LA + L P QV IWF Sbjct: 64 PDSGKK------RKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWF 117 Query: 359 QNKRARWKSKQLER 400 QN R + K + E+ Sbjct: 118 QNHRYKMKRARSEK 131
>LBX1_MOUSE (P52955) Transcription factor LBX1| Length = 280 Score = 48.1 bits (113), Expect = 1e-05 Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK R F+ QI LE F Q L P + Q+A++LGL QV WFQN+RA+ K + L Sbjct: 125 RKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLK-RDL 183 Query: 395 ERQYA 409 E A Sbjct: 184 EEMKA 188
>HMB1_TRIGR (P09080) Homeobox protein HB1 (TGHBOX1) (Fragment)| Length = 307 Score = 48.1 bits (113), Expect = 1e-05 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 3/76 (3%) Frame = +2 Query: 185 PASGKKGGVMIDRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIW 355 P +G G+ + RK+ ++ Q LE F L R++++L+ LGL RQ+ IW Sbjct: 177 PVAGPNVGLEVGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIW 236 Query: 356 FQNKRARWKSKQLERQ 403 FQN+R ++K + ++ Sbjct: 237 FQNRRMKYKKESKNKE 252
>BARX2_HUMAN (Q9UMQ3) Homeobox protein BarH-like 2| Length = 254 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/55 (41%), Positives = 31/55 (56%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 397 F+E Q+ LE F Q L +L LA+ LGL QV W+QN+R +WK L+ Sbjct: 115 FTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK 169
>BARX1_MOUSE (Q9ER42) Homeobox protein BarH-like 1| Length = 254 Score = 48.1 bits (113), Expect = 1e-05 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = +2 Query: 188 ASGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQ 361 A KKG R+ R F+E Q+ LE F Q L ++ LA LGL QV W+Q Sbjct: 137 AKAKKG-----RRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQ 191 Query: 362 NKRARWKSKQLE 397 N+R +WK L+ Sbjct: 192 NRRMKWKKIVLQ 203
>NKX61_HUMAN (P78426) Homeobox protein Nkx-6.1| Length = 367 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 7/70 (10%) Frame = +2 Query: 200 KGGVMIDR-------KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWF 358 +G +++D+ + FS +QI +LE F L ++ +LA LG+ QV +WF Sbjct: 225 QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284 Query: 359 QNKRARWKSK 388 QN+R +W+ K Sbjct: 285 QNRRTKWRKK 294
>HME2B_BRARE (P31533) Homeobox protein engrailed-2b (Zf-En-1) (Eng3)| Length = 261 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Frame = +2 Query: 197 KKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 KK D++ R F+ EQ++ L++ F L +++ LA+ELGL Q+ IWFQNKR Sbjct: 165 KKTPTKEDKRPRTAFTAEQLQRLKNEFQNNRYLTEQRRQALAQELGLNESQIKIWFQNKR 224 Query: 371 ARWK 382 A+ K Sbjct: 225 AKIK 228
>HM05_CAEEL (P20269) Homeobox protein ceh-5| Length = 148 Score = 47.8 bits (112), Expect = 1e-05 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 4/60 (6%) Frame = +2 Query: 215 IDRKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 ++R KR F++EQ++ LE F T L + +LA LGL QV +WFQN+R + K Sbjct: 32 LERPKRPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQK 91
>HM09_CAEEL (P56407) Homeobox protein ceh-9| Length = 147 Score = 47.8 bits (112), Expect = 1e-05 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQ 403 FS +Q+ LE F + L + +LA+ L + QV IWFQN+R +WK + E++ Sbjct: 77 FSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIESEKE 133
>HXD11_HETFR (Q9IA15) Homeobox protein Hox-D11| Length = 265 Score = 47.8 bits (112), Expect = 1e-05 Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ QI+ LE F + ++LQL+R L L RQV IWFQN+ R K K+L Sbjct: 194 RKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKL 251 Query: 395 ER 400 R Sbjct: 252 SR 253
>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed| Length = 596 Score = 47.8 bits (112), Expect = 1e-05 Identities = 24/62 (38%), Positives = 36/62 (58%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 FS Q++ L++ F L +++ L+ ELGL Q+ IWFQNKRA+ K E+ A Sbjct: 505 FSNAQLQRLKNEFNENRYLTEKRRQTLSAELGLNEAQIKIWFQNKRAKIKKSSSEKNPLA 564 Query: 413 LR 418 L+ Sbjct: 565 LQ 566
>HM19_CAEEL (P26797) Homeobox protein ceh-19| Length = 199 Score = 47.8 bits (112), Expect = 1e-05 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%) Frame = +2 Query: 218 DRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQ 391 +RK R +S Q+ LE+ F T L +++QL++ L L Q+ WFQN+R +WK KQ Sbjct: 94 ERKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQNRRTKWK-KQ 152 Query: 392 L 394 L Sbjct: 153 L 153
>HXD11_HUMAN (P31277) Homeobox protein Hox-D11 (Hox-4F)| Length = 338 Score = 47.8 bits (112), Expect = 1e-05 Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ QI+ LE F + ++LQL+R L L RQV IWFQN+ R K K+L Sbjct: 267 RKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKL 324 Query: 395 ER 400 R Sbjct: 325 NR 326
>HXB8_RAT (P18863) Homeobox protein Hox-B8 (R1A) (Fragment)| Length = 92 Score = 47.8 bits (112), Expect = 1e-05 Identities = 21/71 (29%), Positives = 41/71 (57%) Frame = +2 Query: 224 KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQ 403 ++ +S Q LE F L +++++++ LGL RQV IWFQN+R +WK + + + Sbjct: 15 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDK 74 Query: 404 YAALRDDYDAL 436 + + + + + L Sbjct: 75 FPSSKCEQEEL 85
>HXD11_NOTVI (P31263) Homeobox protein Hox-D11 (NvHox-2)| Length = 277 Score = 47.8 bits (112), Expect = 1e-05 Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ QI+ LE F + ++LQL+R L L RQV IWFQN+ R K K+L Sbjct: 206 RKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKL 263 Query: 395 ER 400 R Sbjct: 264 NR 265
>HXD11_CHICK (P24342) Homeobox protein Hox-D11 (Chox-4.6) (GHOX-4.6) (Chox-4E)| Length = 280 Score = 47.8 bits (112), Expect = 1e-05 Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ QI+ LE F + ++LQL+R L L RQV IWFQN+ R K K+L Sbjct: 209 RKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKL 266 Query: 395 ER 400 R Sbjct: 267 NR 268
>HXA11_MOUSE (P31311) Homeobox protein Hox-A11 (Hox-1.9)| Length = 313 Score = 47.8 bits (112), Expect = 1e-05 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Frame = +2 Query: 191 SGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 +G GG RKKR +++ QI+ LE F + ++LQL+R L L RQV IWFQN Sbjct: 233 AGGSGGQRT-RKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQN 291 Query: 365 KRARWKSKQLER 400 +R + K +R Sbjct: 292 RRMKEKKINRDR 303
>HME2_HUMAN (P19622) Homeobox protein engrailed-2 (Hu-En-2)| Length = 333 Score = 47.8 bits (112), Expect = 1e-05 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Frame = +2 Query: 197 KKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 KK D++ R F+ EQ++ L++ F T L +++ LA+EL L Q+ IWFQNKR Sbjct: 237 KKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKR 296 Query: 371 ARWK 382 A+ K Sbjct: 297 AKIK 300
>BSH_DROME (Q04787) Brain-specific homeobox protein| Length = 427 Score = 47.8 bits (112), Expect = 1e-05 Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 2/63 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK R FS+ Q+ LE F Q L ++++LA LGL QV WFQN+R + K KQL Sbjct: 273 RKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK-KQL 331 Query: 395 ERQ 403 R+ Sbjct: 332 RRR 334
>HXABB_DANAE (Q9DDU2) Homeobox protein Hox-A11b| Length = 283 Score = 47.8 bits (112), Expect = 1e-05 Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ QI+ LE F + ++LQL+R L L RQV IWFQN+ R K K+L Sbjct: 212 RKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKL 269 Query: 395 ER 400 R Sbjct: 270 NR 271
>HXABB_BRARE (Q9DDU1) Homeobox protein Hox-A11b (Hox-A11)| Length = 283 Score = 47.8 bits (112), Expect = 1e-05 Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ QI+ LE F + ++LQL+R L L RQV IWFQN+ R K K+L Sbjct: 212 RKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKL 269 Query: 395 ER 400 R Sbjct: 270 NR 271
>GBX2_XENLA (Q91907) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) (XGBX-2) Length = 340 Score = 47.8 bits (112), Expect = 1e-05 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = +2 Query: 221 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 R+ F+ EQ+ LE F + L ++ Q+A L L QV IWFQN+RA+WK Sbjct: 242 RRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHVLKLSEVQVKIWFQNRRAKWK 295
>HME2_MOUSE (P09066) Homeobox protein engrailed-2 (Mo-En-2)| Length = 324 Score = 47.8 bits (112), Expect = 1e-05 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Frame = +2 Query: 197 KKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 KK D++ R F+ EQ++ L++ F T L +++ LA+EL L Q+ IWFQNKR Sbjct: 228 KKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKR 287 Query: 371 ARWK 382 A+ K Sbjct: 288 AKIK 291
>HXB4_FUGRU (O13074) Homeobox protein Hox-B4 (HOXB-4)| Length = 251 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/65 (33%), Positives = 36/65 (55%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 +S GG + ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+ Sbjct: 155 SSNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNR 214 Query: 368 RARWK 382 R +WK Sbjct: 215 RMKWK 219
>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)| Length = 309 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/60 (36%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG + ++ +Q+ LE F L R+++++A L L RQV IWFQN+R +WK Sbjct: 206 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 265
>BARX1_CHICK (Q9W6D8) Homeobox protein BarH-like 1 (Fragment)| Length = 207 Score = 47.4 bits (111), Expect = 2e-05 Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Frame = +2 Query: 185 PASGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWF 358 P S K G R+ R F+E Q+ LE F Q L ++ LA LGL QV W+ Sbjct: 88 PGSKAKKG----RRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWY 143 Query: 359 QNKRARWKSKQLE 397 QN+R +WK L+ Sbjct: 144 QNRRMKWKKIVLQ 156
>HM16_CAEEL (P34326) Homeobox protein engrailed-like ceh-16| Length = 187 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Frame = +2 Query: 188 ASGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQ 361 ++G G +++ R F+ +Q+ L++ F L +++ +LA ELGL Q+ IWFQ Sbjct: 77 STGSSGSSEEEKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKIWFQ 136 Query: 362 NKRARWK 382 NKRA+ K Sbjct: 137 NKRAKLK 143
>Y749_MIMIV (Q5UP03) Putative homeobox protein R749| Length = 224 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/60 (40%), Positives = 37/60 (61%) Frame = +2 Query: 221 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 400 ++ R S+E+ LES ++ P + +LA+++G PRQV IWFQNKR + K LE+ Sbjct: 164 KRVRLSDEERNILESQYSKNNFPSPEIRDELAKKIGKTPRQVQIWFQNKRCK-DRKNLEK 222
>HXC12_MOUSE (P31313) Homeobox protein Hox-C12 (Hox-3.8) (Fragment)| Length = 60 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RKKR +S+ QI+ LE F + ++LQL+R L L RQV IWFQN+R + K Sbjct: 2 RKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 57
>HXA4_MORSA (Q9PWD2) Homeobox protein Hox-A4| Length = 248 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GGV + ++ +Q LE F L R+++++A + L RQV IWFQN+R +WK Sbjct: 146 GGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWK 205 Query: 383 SK 388 + Sbjct: 206 KE 207
>HXA4_LINSA (P81192) Homeobox protein Hox-A4 (LsHox 4) (Fragment)| Length = 80 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +2 Query: 188 ASGKKGGVMIDRKKR-FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 A+G G R + ++ QI LE F L R+++++A L L RQ+ IWFQN Sbjct: 2 ANGNFNGSESKRSRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHALDLSERQIKIWFQN 61 Query: 365 KRARWKSK 388 +R +WK + Sbjct: 62 RRMKWKKE 69
>NKX31_MOUSE (P97436) Homeobox protein Nkx-3.1| Length = 237 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/61 (40%), Positives = 32/61 (52%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 FS Q+ LE F+ Q L ++ LA+ L L QV IWFQN+R + K KQL Sbjct: 132 FSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQLSEDLGV 191 Query: 413 L 415 L Sbjct: 192 L 192
>HM24_CAEEL (Q9NLC2) Homeobox protein ceh-24| Length = 299 Score = 47.4 bits (111), Expect = 2e-05 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Frame = +2 Query: 212 MIDRKKR---FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 M R+KR FS+ Q+ LE F L ++ QLA + L P QV IWFQN R + K Sbjct: 147 MSQRRKRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKIWFQNHRYKCK 206 Query: 383 SKQLERQYAALRDDYD 430 ++ E+ + L D Sbjct: 207 RQEKEKAMSGLGHSED 222
>HXA11_HUMAN (P31270) Homeobox protein Hox-A11 (Hox-1I)| Length = 313 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ QI+ LE F + ++LQL+R L L RQV IWFQN+R + K Sbjct: 242 RKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKINR 301 Query: 395 ER 400 +R Sbjct: 302 DR 303
>HXA4_HUMAN (Q00056) Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4)| Length = 320 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/60 (36%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG + ++ +Q+ LE F L R+++++A L L RQV IWFQN+R +WK Sbjct: 212 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 271
>HXA11_CHICK (P31258) Homeobox protein Hox-A11 (Ghox-1I) (Chox-1.9)| Length = 297 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ QI+ LE F + ++LQL+R L L RQV IWFQN+R + K Sbjct: 226 RKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKINR 285 Query: 395 ER 400 +R Sbjct: 286 DR 287
>HXC4_MOUSE (Q08624) Homeobox protein Hox-C4 (Hox-3.5)| Length = 264 Score = 47.4 bits (111), Expect = 2e-05 Identities = 21/60 (35%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG + ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 153 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>HXC4_HUMAN (P09017) Homeobox protein Hox-C4 (Hox-3E) (CP19)| Length = 264 Score = 47.4 bits (111), Expect = 2e-05 Identities = 21/60 (35%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG + ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 153 GGEPKRSRAAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>HXA4_HETFR (Q9IA22) Homeobox protein Hox-A4| Length = 247 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/60 (36%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG + ++ +Q+ LE F L R+++++A L L RQV IWFQN+R +WK Sbjct: 146 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 205
>NKX12_MOUSE (P42580) NK1 transcription factor-related protein 2 (Homeobox| protein SAX-1) (NKX-1.1) Length = 305 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/52 (42%), Positives = 31/52 (59%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 F+ EQ+ +LE+ F L ++L LA L L QV IWFQN+R +WK + Sbjct: 163 FTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 214
>HXD4_MOUSE (P10628) Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1)| Length = 250 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/60 (35%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG + ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 149 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 208
>HM24_CAEBR (O17319) Homeobox protein ceh-24| Length = 297 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Frame = +2 Query: 212 MIDRKKR---FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 M R+KR FS+ Q+ LE F L ++ QLA + L P QV IWFQN R + K Sbjct: 142 MSQRRKRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKIWFQNHRYKCK 201 Query: 383 SKQLERQYAAL 415 ++ E+ + L Sbjct: 202 RQEKEKAMSGL 212
>HXA4A_BRARE (Q9PWL5) Homeobox protein Hox-A4a (Zf-26) (Hoxx4)| Length = 244 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/60 (36%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GGV + ++ +Q LE F L R+++++A + L RQV IWFQN+R +WK Sbjct: 144 GGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWK 203
>HXD8_MOUSE (P23463) Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4)| Length = 289 Score = 47.0 bits (110), Expect = 2e-05 Identities = 24/79 (30%), Positives = 43/79 (54%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A G++ G ++ +S Q LE F L +++++++ L L RQV IWFQN+ Sbjct: 192 APGRRRG-----RQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNR 246 Query: 368 RARWKSKQLERQYAALRDD 424 R +WK + + ++ A R + Sbjct: 247 RMKWKKENNKDKFPASRPE 265
>GSC_BRARE (P53544) Homeobox protein goosecoid (ZGSC)| Length = 240 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/61 (34%), Positives = 42/61 (68%), Gaps = 4/61 (6%) Frame = +2 Query: 221 RKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 RK+R F++EQ+++LE++F + + QLAR++ L+ +V +WF+N+RA+W+ + Sbjct: 145 RKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQ 204 Query: 389 Q 391 + Sbjct: 205 K 205
>HLX1_MOUSE (Q61670) Homeobox protein HLX1| Length = 476 Score = 47.0 bits (110), Expect = 2e-05 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK-SKQLERQ 403 FS Q K LE F Q + + QLA LGL QV +WFQN+R +W+ SK+ + Q Sbjct: 280 FSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQ 337
>HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)| Length = 488 Score = 47.0 bits (110), Expect = 2e-05 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK-SKQLERQ 403 FS Q K LE F Q + + QLA LGL QV +WFQN+R +W+ SK+ + Q Sbjct: 283 FSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQ 340
>HME2A_XENLA (P52729) Homeobox protein engrailed-2-A (En-2A) (EN2 1.4)| Length = 265 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Frame = +2 Query: 197 KKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 KK D++ R F+ +Q++ L++ F T L +++ LA+EL L Q+ IWFQNKR Sbjct: 169 KKSVSKEDKRPRTAFTADQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKR 228 Query: 371 ARWKSKQLERQYAAL 415 A+ K + AL Sbjct: 229 AKIKKATGNKNSLAL 243
>HXD4_CHICK (P17278) Homeobox protein Hox-D4 (Chox-A)| Length = 235 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/60 (35%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG + ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 141 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 200
>HXD4_HUMAN (P09016) Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13)| Length = 255 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/60 (35%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG + ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 151 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 210
>BARH2_DROME (Q24256) Homeobox protein B-H2 (Homeobox protein BarH2)| Length = 645 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RK R F++ Q+++LE F Q L + +++LA +L L QV W+QN+R +WK Sbjct: 381 RKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWK 436
>SAX1_CHICK (P19601) Homeobox protein SAX-1 (CHOX-3) (Fragment)| Length = 232 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/52 (42%), Positives = 31/52 (59%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 F+ EQ+ +LE+ F L ++L LA L L QV IWFQN+R +WK + Sbjct: 72 FTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 123
>HXB4_CHICK (P14840) Homeobox protein Hox-B4 (Chox-Z)| Length = 245 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/60 (35%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG + ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 147 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 206
>GSC_CHICK (P53545) Homeobox protein goosecoid| Length = 245 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/61 (34%), Positives = 42/61 (68%), Gaps = 4/61 (6%) Frame = +2 Query: 221 RKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 RK+R F++EQ+++LE++F + + QLAR++ L+ +V +WF+N+RA+W+ + Sbjct: 149 RKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQ 208 Query: 389 Q 391 + Sbjct: 209 K 209
>BARX1_HUMAN (Q9HBU1) Homeobox protein BarH-like 1| Length = 225 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/55 (40%), Positives = 30/55 (54%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 397 F+E Q+ LE F Q L ++ LA LGL QV W+QN+R +WK L+ Sbjct: 120 FTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQ 174
>NKX31_HUMAN (Q99801) Homeobox protein Nkx-3.1| Length = 234 Score = 47.0 bits (110), Expect = 2e-05 Identities = 25/61 (40%), Positives = 33/61 (54%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 FS Q+ LE F+ Q L ++ LA+ L L QV IWFQN+R + K KQL + Sbjct: 131 FSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQLSSELGD 190 Query: 413 L 415 L Sbjct: 191 L 191
>GSC_MOUSE (Q02591) Homeobox protein goosecoid| Length = 256 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/61 (34%), Positives = 42/61 (68%), Gaps = 4/61 (6%) Frame = +2 Query: 221 RKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 RK+R F++EQ+++LE++F + + QLAR++ L+ +V +WF+N+RA+W+ + Sbjct: 159 RKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQ 218 Query: 389 Q 391 + Sbjct: 219 K 219
>GSC_HUMAN (P56915) Homeobox protein goosecoid| Length = 257 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/61 (34%), Positives = 42/61 (68%), Gaps = 4/61 (6%) Frame = +2 Query: 221 RKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 RK+R F++EQ+++LE++F + + QLAR++ L+ +V +WF+N+RA+W+ + Sbjct: 159 RKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQ 218 Query: 389 Q 391 + Sbjct: 219 K 219
>HMH2_DUGTI (Q00401) Homeobox protein DTH-2| Length = 363 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = +2 Query: 212 MIDRKKR---FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 M R+KR FS+ QI LE F Q L ++ LA + L P QV IWFQN R + K Sbjct: 130 MSQRRKRRILFSQAQIYELERRFKQQKYLSAPEREHLANLINLTPTQVKIWFQNHRYKCK 189 Query: 383 SKQLERQ 403 Q +++ Sbjct: 190 RSQKDKE 196
>HXC4_ORYLA (Q9PVS4) Homeobox protein Hox-C4| Length = 261 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/64 (34%), Positives = 35/64 (54%) Frame = +2 Query: 191 SGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 SG G + ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+R Sbjct: 147 SGYNGTEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRR 206 Query: 371 ARWK 382 +WK Sbjct: 207 MKWK 210
>HXA7_MOUSE (P02830) Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6)| Length = 229 Score = 47.0 bits (110), Expect = 2e-05 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Frame = +2 Query: 218 DRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 DRK+ ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 128 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187 Query: 389 QLERQYAALRDDYDALLS 442 + A DA+ S Sbjct: 188 HKDESQAPTAAPEDAVPS 205
>LOX10_HELTR (P42584) Homeobox protein LOX10 (Fragment)| Length = 184 Score = 46.6 bits (109), Expect = 3e-05 Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK+R FS+ QI LE F Q L ++ LA +GL P QV IWFQN R + K + Sbjct: 77 RKRRILFSQAQIYELERRFRQQKYLSAPEREHLATFIGLTPTQVKIWFQNHRYKTKKSKK 136 Query: 395 E 397 E Sbjct: 137 E 137
>HXB4_HUMAN (P17483) Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6)| Length = 251 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/60 (35%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG + ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 159 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>BARH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox protein BarH1)| Length = 544 Score = 46.6 bits (109), Expect = 3e-05 Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RK R F++ Q+++LE F Q L +++ +LA +L L QV W+QN+R +WK Sbjct: 300 RKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWK 355
>HXBAA_BRARE (Q9PWL7) Homeobox protein Hox-B10a (Hox-B10) (Fragment)| Length = 85 Score = 46.6 bits (109), Expect = 3e-05 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +S+ QI LE F L ++L+++R + L RQV IWFQN+R + K Sbjct: 13 RKKRCPYSKHQILELEKEFLFNMYLTRERRLEISRSINLTDRQVKIWFQNRRMKLKKMTR 72 Query: 395 ERQ 403 E + Sbjct: 73 EHR 75
>HXA7_SHEEP (Q28600) Homeobox protein Hox-A7 (Fragment)| Length = 71 Score = 46.6 bits (109), Expect = 3e-05 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Frame = +2 Query: 218 DRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 DRK+ ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 3 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 62 Query: 389 QLERQYAA 412 E AA Sbjct: 63 HKEEGPAA 70
>YD73_SCHPO (Q10328) Putative homeobox protein C32A11.03c in chromosome I| Length = 942 Score = 46.6 bits (109), Expect = 3e-05 Identities = 26/73 (35%), Positives = 39/73 (53%) Frame = +2 Query: 185 PASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 P SG +K+R + +Q+ L F+ T P + ++ REL + R V IWFQN Sbjct: 157 PESGGSTSAPKSKKQRLTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWFQN 216 Query: 365 KRARWKSKQLERQ 403 +RA KSK + R+ Sbjct: 217 RRA--KSKLISRR 227
>HXB4_MOUSE (P10284) Homeobox protein Hox-B4 (Hox-2.6)| Length = 250 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/60 (35%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG + ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 158 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>GSCB_XENLA (P53546) Homeobox protein goosecoid isoform B| Length = 243 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/61 (34%), Positives = 41/61 (67%), Gaps = 4/61 (6%) Frame = +2 Query: 221 RKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 RK+R F++EQ+++LE++F + + QLAR + L+ +V +WF+N+RA+W+ + Sbjct: 147 RKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRRQ 206 Query: 389 Q 391 + Sbjct: 207 K 207
>GSCA_XENLA (P29454) Homeobox protein goosecoid isoform A| Length = 243 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/61 (34%), Positives = 41/61 (67%), Gaps = 4/61 (6%) Frame = +2 Query: 221 RKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 RK+R F++EQ+++LE++F + + QLAR + L+ +V +WF+N+RA+W+ + Sbjct: 147 RKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRRQ 206 Query: 389 Q 391 + Sbjct: 207 K 207
>HXB4A_BRARE (P22574) Homeobox protein Hox-B4a (Hox-B4) (Zf-13)| Length = 246 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/60 (35%), Positives = 34/60 (56%) Frame = +2 Query: 203 GGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 GG + ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 148 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWK 207
>HXC4A_BRARE (Q9PWM3) Homeobox protein Hox-C4a (Hox-C4)| Length = 268 Score = 46.6 bits (109), Expect = 3e-05 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 161 YTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWK 210
>HXB8B_BRARE (Q8JH55) Homeobox protein Hox-B8b (Hox-A8)| Length = 247 Score = 46.2 bits (108), Expect = 4e-05 Identities = 22/83 (26%), Positives = 46/83 (55%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A+G++ G ++ +S Q LE F L +++++++ L L RQV IWFQN+ Sbjct: 142 ATGRRRG-----RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNR 196 Query: 368 RARWKSKQLERQYAALRDDYDAL 436 R +WK + + ++ + + + + + Sbjct: 197 RMKWKKEHNKDKFPSSKAEQEEI 219
>DFD_DROME (P07548) Homeotic protein deformed| Length = 586 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/54 (37%), Positives = 32/54 (59%) Frame = +2 Query: 221 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 ++ ++ QI LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 369 QRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWK 422
>BARH2_HUMAN (Q9NY43) BarH-like 2 homeobox protein| Length = 387 Score = 46.2 bits (108), Expect = 4e-05 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RK R FS+ Q+ LE F Q L + ++ LA L L QV W+QN+R +WK Sbjct: 233 RKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK 288
>HM1_CHICK (P13544) Homeobox protein CHOX-1 (Fragment)| Length = 67 Score = 46.2 bits (108), Expect = 4e-05 Identities = 22/56 (39%), Positives = 33/56 (58%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 400 FS Q+ LE F L ++L++AR L L+ QV +WFQN+R + K ++ ER Sbjct: 8 FSTRQLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERER 63
>DTH1_DUGTI (Q00400) Homeobox protein DTH-1| Length = 533 Score = 46.2 bits (108), Expect = 4e-05 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Frame = +2 Query: 191 SGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 + G + RK+R FS++QI LE F + L ++ LA +GL P QV IWFQN Sbjct: 368 NSSSGDIGKKRKRRVLFSKKQILELERHFRQKKYLSAPEREHLANLIGLSPTQVKIWFQN 427 Query: 365 KRARWKSKQLER 400 R + K E+ Sbjct: 428 HRYKMKRAHHEK 439
>HXDAA_BRARE (Q90469) Homeobox protein Hox-D10a (Hox-D10) (Hox-C10)| Length = 343 Score = 46.2 bits (108), Expect = 4e-05 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ Q LE F L ++L++++ + L RQV IWFQN+R + K Sbjct: 259 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSR 318 Query: 395 ERQYAALRDDYDALLSSYDQLK 460 E + L + + +S+ ++ K Sbjct: 319 ENRIRELTSNLNFFVSTQNKCK 340
>HXB4_XENLA (P09070) Homeobox protein Hox-B4 (Xhox-1A)| Length = 232 Score = 46.2 bits (108), Expect = 4e-05 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 ++ +Q+ LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 148 YTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWK 197
>HXABA_BRARE (Q9DDU0) Homeobox protein Hox-A11a| Length = 284 Score = 46.2 bits (108), Expect = 4e-05 Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ QI+ LE F + ++LQL+R L L RQV +WFQN+ R K K+L Sbjct: 213 RKKRCPYTKFQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKMWFQNR--RMKEKKL 270 Query: 395 ER 400 R Sbjct: 271 NR 272
>GSC_DROME (P54366) Homeobox protein goosecoid| Length = 419 Score = 46.2 bits (108), Expect = 4e-05 Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%) Frame = +2 Query: 221 RKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 RK+R F+EEQ++ LE+ F + + QLA ++ L+ +V +WF+N+RA+W+ + Sbjct: 285 RKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQ 344 Query: 389 QLERQ 403 + E Q Sbjct: 345 KREEQ 349
>BARH2_RAT (O88181) BarH-like 2 homeobox protein (Bar-class homeodomain| protein MBH1) (Homeobox protein B-H1) Length = 384 Score = 46.2 bits (108), Expect = 4e-05 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RK R FS+ Q+ LE F Q L + ++ LA L L QV W+QN+R +WK Sbjct: 230 RKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK 285
>BARH2_MOUSE (Q8VIB5) BarH-like 2 homeobox protein (Bar-class homeodomain| protein MBH1) (Homeobox protein B-H1) Length = 384 Score = 46.2 bits (108), Expect = 4e-05 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RK R FS+ Q+ LE F Q L + ++ LA L L QV W+QN+R +WK Sbjct: 230 RKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK 285
>MATA1_PICAN (Q707Y6) Mating-type protein A1 (MATa1 transcription factor)| Length = 181 Score = 46.2 bits (108), Expect = 4e-05 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Frame = +2 Query: 218 DRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 D+KKR E + LE F + +++ ++ARE G+ P QV +WF NKRAR KS+ Sbjct: 122 DKKKRRHIPESSKELLEKAFKVKRFPNSKERERIARECGISPLQVRVWFTNKRARSKSR 180
>HMX_STRPU (Q26656) Homeobox protein Hmx (SpHmx) (H6-like) (Fragment)| Length = 405 Score = 45.8 bits (107), Expect = 5e-05 Identities = 26/60 (43%), Positives = 32/60 (53%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 FS Q+ LES F + L ++ LA L L QV IWFQN+R +WK RQ AA Sbjct: 260 FSRSQVFQLESTFEVKRYLSSSERAGLAANLHLTETQVKIWFQNRRNKWK-----RQMAA 314
>HXB7A_BRARE (Q8AWY9) Homeobox protein Hox-B7a (Hox-B7)| Length = 227 Score = 45.8 bits (107), Expect = 5e-05 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +2 Query: 218 DRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 DRK+ +S Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 144 DRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 203
>HXD4A_BRARE (O57374) Homeobox protein Hox-D4a (Hox-D4)| Length = 236 Score = 45.8 bits (107), Expect = 5e-05 Identities = 19/50 (38%), Positives = 30/50 (60%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 ++ +Q+ LE F L R++++ A L L RQ+ IWFQN+R +WK Sbjct: 153 YTRQQVLELEKEFHFNRYLTRRRRIESAHTLSLSERQIKIWFQNRRMKWK 202
>BARH1_RAT (P63156) BarH-like 1 homeobox protein (Bar-class homeodomain| protein MBH2) (BarH-related homeobox protein 1) Length = 327 Score = 45.8 bits (107), Expect = 5e-05 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RK R F++ Q+ LE F Q L + +++LA L L QV W+QN+R +WK Sbjct: 179 RKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK 234
>BARH1_MOUSE (P63157) BarH-like 1 homeobox protein (Bar-class homeodomain| protein MBH2) (BarH-related homeobox protein 1) Length = 327 Score = 45.8 bits (107), Expect = 5e-05 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RK R F++ Q+ LE F Q L + +++LA L L QV W+QN+R +WK Sbjct: 179 RKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK 234
>BARH1_HUMAN (Q9BZE3) BarH-like 1 homeobox protein| Length = 327 Score = 45.8 bits (107), Expect = 5e-05 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RK R F++ Q+ LE F Q L + +++LA L L QV W+QN+R +WK Sbjct: 179 RKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK 234
>FWA_ARATH (Q9FVI6) Homeobox protein FWA| Length = 686 Score = 45.8 bits (107), Expect = 5e-05 Identities = 26/85 (30%), Positives = 42/85 (49%) Frame = +2 Query: 206 GVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKS 385 G + R R + Q + LE+ + Q+ +L + L + QV WFQNKR K Sbjct: 38 GGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKI 97 Query: 386 KQLERQYAALRDDYDALLSSYDQLK 460 + LR+++D LL++ DQL+ Sbjct: 98 NNDHLENVTLREEHDRLLATQDQLR 122
>HXA7_MORSA (Q9PWD4) Homeobox protein Hox-A7| Length = 225 Score = 45.8 bits (107), Expect = 5e-05 Identities = 21/58 (36%), Positives = 32/58 (55%) Frame = +2 Query: 224 KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 397 ++ +S Q LE F L R+++++A L L RQ+ IWFQN+R +WK E Sbjct: 130 RQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDHKE 187
>HXD8_HUMAN (P13378) Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4)| Length = 290 Score = 45.8 bits (107), Expect = 5e-05 Identities = 23/79 (29%), Positives = 42/79 (53%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A G++ G ++ +S Q LE F L +++++++ L L RQV IWFQN+ Sbjct: 194 APGRRRG-----RQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNR 248 Query: 368 RARWKSKQLERQYAALRDD 424 R +WK + + ++ R + Sbjct: 249 RMKWKKENNKDKFPVSRQE 267
>TLX3_CHICK (O93367) T-cell leukemia homeobox protein 3 (Homeobox protein| Hox-11L2) (Homeobox TLX-3) Length = 297 Score = 45.8 bits (107), Expect = 5e-05 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 8/82 (9%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK-----SKQLE 397 FS QI LE F Q L ++ LA+ L + QV WFQN+R +W+ ++ E Sbjct: 179 FSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAE 238 Query: 398 RQYAA---LRDDYDALLSSYDQ 454 RQ A+ L+ +DA S ++ Sbjct: 239 RQQASRLMLQLQHDAFQKSLNE 260
>HMX3_MOUSE (P42581) Homeobox protein HMX3 (Homeobox protein Nkx-5.1)| Length = 458 Score = 45.8 bits (107), Expect = 5e-05 Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Frame = +2 Query: 221 RKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 RKK+ FS Q+ LES F + L ++ LA L L QV IWFQN+R +WK Sbjct: 328 RKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWK-- 385 Query: 389 QLERQYAA 412 RQ AA Sbjct: 386 ---RQLAA 390
>HXD12_CARPS (Q5EU40) Homeobox protein Hox-D12| Length = 270 Score = 45.4 bits (106), Expect = 7e-05 Identities = 22/65 (33%), Positives = 38/65 (58%) Frame = +2 Query: 221 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 400 ++K ++++QI LE+ F + +++ +L+ L L +QV IWFQN+R + K L Sbjct: 205 KRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVVLRE 264 Query: 401 QYAAL 415 Q AL Sbjct: 265 QALAL 269
>HLXB9_MOUSE (Q9QZW9) Homeobox protein HB9| Length = 404 Score = 45.4 bits (106), Expect = 7e-05 Identities = 21/60 (35%), Positives = 33/60 (55%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 F+ +Q+ LE F L ++ ++A L L QV IWFQN+R +WK + ++ AA Sbjct: 248 FTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAA 307
>PITX3_XENLA (Q9I8K3) Pituitary homeobox 3 (Homeobox protein PITX3) (xPitx3)| (XPitx-3) Length = 292 Score = 45.4 bits (106), Expect = 7e-05 Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 8/100 (8%) Frame = +2 Query: 191 SGKKGGVMIDRKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWF 358 S + G++ +++R F+ +Q++ LE+ F + + ++A L +V +WF Sbjct: 49 SNPEDGILKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWF 108 Query: 359 QNKRARWKSKQLERQYAALRDDYDA----LLSSYDQLKKG 466 +N+RA+W+ ++ +Q ++ + A L+ YD + G Sbjct: 109 KNRRAKWRKRERNQQAELCKNSFGAQFNGLMQPYDDMYSG 148
>HXA7_RAT (P09634) Homeobox protein Hox-A7 (Hox-1.1) (R5) (Fragment)| Length = 105 Score = 45.4 bits (106), Expect = 7e-05 Identities = 26/83 (31%), Positives = 41/83 (49%) Frame = +2 Query: 194 GKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRA 373 GK+G ++ ++ Q LE F L R+ +++A L L RQ+ IWFQN+R Sbjct: 5 GKRG------RQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRM 58 Query: 374 RWKSKQLERQYAALRDDYDALLS 442 +WK + + A DA+ S Sbjct: 59 KWKKEHKDESQAPTAVPEDAVPS 81
>NKX25_RAT (O35767) Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E)| (rNKx-2.5) Length = 318 Score = 45.4 bits (106), Expect = 7e-05 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK R FS+ Q+ LE F Q L P ++ QLA L L QV IWFQN+R + K ++ Sbjct: 138 RKPRVLFSQAQVYELERRFKQQRYLSPAERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQ 197 Query: 395 ER 400 ++ Sbjct: 198 DQ 199
>HXD12_MOUSE (P23812) Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6)| Length = 279 Score = 45.4 bits (106), Expect = 7e-05 Identities = 23/75 (30%), Positives = 43/75 (57%) Frame = +2 Query: 185 PASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 P G G ++K ++++QI LE+ F + +++ +L+ L L +QV IWFQN Sbjct: 202 PWGGAAPGRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQN 261 Query: 365 KRARWKSKQLERQYA 409 +R + K + ++R+ A Sbjct: 262 RRMK-KKRVVQREQA 275
>APTE_DROME (P29673) Protein apterous| Length = 469 Score = 45.4 bits (106), Expect = 7e-05 Identities = 19/69 (27%), Positives = 39/69 (56%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 F Q+++++S FA + + QL+++ GL R + +WFQN RA+W+ +++ + Sbjct: 374 FKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQNARAKWRRMMMKQDGSG 433 Query: 413 LRDDYDALL 439 L + + L Sbjct: 434 LLEKGEGAL 442
>GSCL_HUMAN (O15499) Homeobox protein goosecoid-like (GSC-2)| Length = 205 Score = 45.4 bits (106), Expect = 7e-05 Identities = 18/53 (33%), Positives = 36/53 (67%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQ 391 FSEEQ+++LE++F + + +LA + L+ +V +WF+N+RA+W+ ++ Sbjct: 133 FSEEQLQALEALFVQNQYPDVSTRERLAGRIRLREERVEVWFKNRRAKWRHQK 185
>SMOX4_SCHMA (Q26603) Homeobox protein SMOX-4 (Fragment)| Length = 98 Score = 45.4 bits (106), Expect = 7e-05 Identities = 21/54 (38%), Positives = 32/54 (59%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 F++ Q+ LE F+ L ++ LA+ L L +QV IWFQN+R RW+ + L Sbjct: 44 FTDYQLICLEREFSHIQYLSRIDRIHLAQNLNLTEKQVKIWFQNRRVRWRKRNL 97
>HLXB9_HUMAN (P50219) Homeobox protein HB9| Length = 403 Score = 45.4 bits (106), Expect = 7e-05 Identities = 21/60 (35%), Positives = 33/60 (55%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 F+ +Q+ LE F L ++ ++A L L QV IWFQN+R +WK + ++ AA Sbjct: 250 FTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAA 309
>HXB6B_BRARE (Q9YGT4) Homeobox protein Hox-B6b (Hox-A7)| Length = 224 Score = 45.4 bits (106), Expect = 7e-05 Identities = 23/80 (28%), Positives = 40/80 (50%) Frame = +2 Query: 191 SGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 +G G ++ ++ Q LE F L R++++++ L L RQ+ IWFQN+R Sbjct: 140 NGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRR 199 Query: 371 ARWKSKQLERQYAALRDDYD 430 +WK + A + D+ D Sbjct: 200 MKWKKENKAVNSAKVSDEED 219
>HM12_CAEEL (P17487) Homeobox protein ceh-12| Length = 180 Score = 45.4 bits (106), Expect = 7e-05 Identities = 23/59 (38%), Positives = 33/59 (55%) Frame = +2 Query: 206 GVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 G M + FS EQ+ LE F+ L ++ QLA++L L Q+ IWFQN+R + K Sbjct: 108 GKMRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNK 166
>LHX2_HUMAN (P50458) LIM/homeobox protein Lhx2 (Homeobox protein LH-2)| Length = 406 Score = 45.4 bits (106), Expect = 7e-05 Identities = 21/71 (29%), Positives = 39/71 (54%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 F Q+++++S FA + + QLA++ GL R + +WFQN RA+++ L ++ Sbjct: 273 FKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTG 332 Query: 413 LRDDYDALLSS 445 + DA L + Sbjct: 333 VDKSTDAALQT 343
>HXA7_XENLA (P09071) Homeobox protein Hox-A7 (XlHbox-3) (Xhox-36)| Length = 209 Score = 45.4 bits (106), Expect = 7e-05 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Frame = +2 Query: 218 DRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 DRK+ ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 121 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 180 Query: 389 QLE 397 E Sbjct: 181 HKE 183
>HXA7_CHICK (Q90VZ9) Homeobox protein Hox-A7| Length = 219 Score = 45.4 bits (106), Expect = 7e-05 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Frame = +2 Query: 218 DRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 DRK+ ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 128 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 187 Query: 389 QLE 397 E Sbjct: 188 HKE 190
>HM13_CAEEL (P17488) Homeobox protein ceh-13| Length = 202 Score = 45.4 bits (106), Expect = 7e-05 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%) Frame = +2 Query: 185 PASGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWF 358 PA+ KK + + R F+ Q+ LE F T + ++ ++A L LQ QV IWF Sbjct: 103 PAAPKKKVIDENGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWF 162 Query: 359 QNKRARWKSKQLERQYAA 412 QN+R + K ++ E+ + A Sbjct: 163 QNRRMKEKKREKEKAFLA 180
>EMX2_MOUSE (Q04744) Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty| spiracles-like protein 2) Length = 253 Score = 45.4 bits (106), Expect = 7e-05 Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 10/141 (7%) Frame = +2 Query: 11 AS*PPSSLARPHT------RDPFCFFPFLPTPDQVHDHRRDLAXXXXXXXXXXXXXXXXX 172 A+ P SL PH RDP F+P+L +H +R Sbjct: 96 AAHPLPSLHSPHPLFASQQRDPSTFYPWL-----IHRYR-------------YLGHRFQG 137 Query: 173 XXXXPASGKKGGVMIDRKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPR 340 P S + + KR FS Q+ LE F + ++ QLA L L Sbjct: 138 NDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTET 197 Query: 341 QVAIWFQNKRARWKSKQLERQ 403 QV +WFQN+R ++K ++LE + Sbjct: 198 QVKVWFQNRRTKFKRQKLEEE 218
>PITX1_XENLA (Q9W751) Pituitary homeobox 1 (X-PITX-1) (xPitx1)| Length = 305 Score = 45.1 bits (105), Expect = 9e-05 Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Frame = +2 Query: 221 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 400 ++ F+ +Q++ LE+ F + + ++A L +V +WF+N+RA+W+ ++ + Sbjct: 81 QRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQ 140 Query: 401 QYAALRDDY----DALLSSYDQLKKG 466 Q ++ Y L+ YD++ G Sbjct: 141 QMDLCKNGYVPQFSGLMQPYDEMYAG 166
>HXA9A_BRARE (Q9PWL6) Homeobox protein Hox-A9a (Hoxx9)| Length = 250 Score = 45.1 bits (105), Expect = 9e-05 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RKKR +++ QI LE F T L ++ ++AR L L RQV IWFQN+R + K Sbjct: 185 RKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 240
>HXA9_FUGRU (O42506) Homeobox protein Hox-A9 (HoxA-9)| Length = 283 Score = 45.1 bits (105), Expect = 9e-05 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RKKR +++ QI LE F T L ++ ++AR L L RQV IWFQN+R + K Sbjct: 217 RKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 272
>HXC4_RAT (P18865) Homeobox protein Hox-C4 (R3) (Fragment)| Length = 76 Score = 45.1 bits (105), Expect = 9e-05 Identities = 19/47 (40%), Positives = 29/47 (61%) Frame = +2 Query: 242 EQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 +Q+ LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 21 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67
>HXB6_MOUSE (P09023) Homeobox protein Hox-B6 (Hox-2.2) (MH-22A)| Length = 224 Score = 45.1 bits (105), Expect = 9e-05 Identities = 22/66 (33%), Positives = 37/66 (56%) Frame = +2 Query: 191 SGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 SG++G ++ ++ Q LE F L R+++++A L L RQ+ IWFQN+R Sbjct: 145 SGRRG------RQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 198 Query: 371 ARWKSK 388 +WK + Sbjct: 199 MKWKKE 204
>HXB6_HUMAN (P17509) Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2)| Length = 224 Score = 45.1 bits (105), Expect = 9e-05 Identities = 22/66 (33%), Positives = 37/66 (56%) Frame = +2 Query: 191 SGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 SG++G ++ ++ Q LE F L R+++++A L L RQ+ IWFQN+R Sbjct: 145 SGRRG------RQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 198 Query: 371 ARWKSK 388 +WK + Sbjct: 199 MKWKKE 204
>ANF1_CHICK (P79775) Homeobox protein ANF-1 (GANF)| Length = 196 Score = 45.1 bits (105), Expect = 9e-05 Identities = 22/69 (31%), Positives = 42/69 (60%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 F+ QI+ LE++F + + +LAR+L L+ ++ IWFQN+RA+ K E Q+ Sbjct: 126 FTRNQIEVLENVFKMNSYPGIDIREELARKLDLEEDRIQIWFQNRRAKLKRSHRESQFLM 185 Query: 413 LRDDYDALL 439 +++++ + L Sbjct: 186 VKNNFTSSL 194
>NKX22_MESAU (P43697) Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B)| Length = 273 Score = 45.1 bits (105), Expect = 9e-05 Identities = 26/72 (36%), Positives = 34/72 (47%) Frame = +2 Query: 185 PASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 P G G R+ FS+ Q LE F Q L ++ LA + L P QV IWFQN Sbjct: 119 PGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQN 178 Query: 365 KRARWKSKQLER 400 R + K + E+ Sbjct: 179 HRYKMKRARAEK 190
>NKX22_HUMAN (O95096) Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B)| Length = 273 Score = 45.1 bits (105), Expect = 9e-05 Identities = 26/72 (36%), Positives = 34/72 (47%) Frame = +2 Query: 185 PASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 364 P G G R+ FS+ Q LE F Q L ++ LA + L P QV IWFQN Sbjct: 119 PGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQN 178 Query: 365 KRARWKSKQLER 400 R + K + E+ Sbjct: 179 HRYKMKRARAEK 190
>HXA9_MORSA (Q9PWD5) Homeobox protein Hox-A9| Length = 269 Score = 45.1 bits (105), Expect = 9e-05 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RKKR +++ QI LE F T L ++ ++AR L L RQV IWFQN+R + K Sbjct: 203 RKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 258
>LHX2_MOUSE (Q9Z0S2) LIM/homeobox protein Lhx2| Length = 406 Score = 45.1 bits (105), Expect = 9e-05 Identities = 21/71 (29%), Positives = 39/71 (54%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 F Q+++++S FA + + QLA++ GL R + +WFQN RA+++ L ++ Sbjct: 273 FKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTG 332 Query: 413 LRDDYDALLSS 445 + DA L + Sbjct: 333 VDKTSDATLQT 343
>OTP_MOUSE (O09113) Homeobox protein orthopedia| Length = 325 Score = 45.1 bits (105), Expect = 9e-05 Identities = 20/56 (35%), Positives = 33/56 (58%) Frame = +2 Query: 224 KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQ 391 + RF+ Q+ LE FA + + +LA +GL +V +WFQN+RA+WK ++ Sbjct: 108 RTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRK 163
>LHX2_RAT (P36198) LIM/homeobox protein Lhx2 (Homeobox protein LH-2)| Length = 426 Score = 45.1 bits (105), Expect = 9e-05 Identities = 21/71 (29%), Positives = 39/71 (54%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 F Q+++++S FA + + QLA++ GL R + +WFQN RA+++ L ++ Sbjct: 271 FKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTG 330 Query: 413 LRDDYDALLSS 445 + DA L + Sbjct: 331 VDKTSDATLQT 341
>HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)| Length = 401 Score = 45.1 bits (105), Expect = 9e-05 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Frame = +2 Query: 197 KKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 KK D++ R F+ EQ++ L++ F + +++ LA+EL L Q+ IWFQNKR Sbjct: 305 KKKNEKEDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNKR 364 Query: 371 ARWK 382 A+ K Sbjct: 365 AKIK 368
>TLX2_MOUSE (Q61663) T-cell leukemia homeobox protein 2 (Homeobox protein| Hox-11L1) (Homeobox TLX-2) (PMUR10F) Length = 284 Score = 45.1 bits (105), Expect = 9e-05 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYA 409 FS Q+ LE F Q L ++ LA+ L + QV WFQN+R +W+ + E + A Sbjct: 164 FSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREA 222
>TLX2_HUMAN (O43763) T-cell leukemia homeobox protein 2 (Homeobox protein| Hox-11L1) (Neural crest homeobox protein) Length = 284 Score = 45.1 bits (105), Expect = 9e-05 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYA 409 FS Q+ LE F Q L ++ LA+ L + QV WFQN+R +W+ + E + A Sbjct: 164 FSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREA 222
>HME1_HUMAN (Q05925) Homeobox protein engrailed-1 (Hu-En-1)| Length = 392 Score = 45.1 bits (105), Expect = 9e-05 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Frame = +2 Query: 197 KKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 KK D++ R F+ EQ++ L++ F + +++ LA+EL L Q+ IWFQNKR Sbjct: 296 KKKNEKEDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNKR 355 Query: 371 ARWK 382 A+ K Sbjct: 356 AKIK 359
>HME1B_XENLA (P31538) Homeobox protein engrailed-1-B (En-1B) (Fragment)| Length = 171 Score = 45.1 bits (105), Expect = 9e-05 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Frame = +2 Query: 197 KKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 KK D++ R F+ EQ++ L++ F + +++ LA+EL L Q+ IWFQNKR Sbjct: 75 KKKSEKEDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNKR 134 Query: 371 ARWK 382 A+ K Sbjct: 135 AKIK 138
>CDX4_HUMAN (O14627) Homeobox protein CDX-4 (Caudal-type homeobox protein 4)| Length = 284 Score = 44.7 bits (104), Expect = 1e-04 Identities = 24/78 (30%), Positives = 43/78 (55%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 +++ Q LE F + ++K +LA LGL RQV IWFQN+RA+ + K ++++ + Sbjct: 180 YTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAK-ERKMIKKKISQ 238 Query: 413 LRDDYDALLSSYDQLKKG 466 + ++ S D + G Sbjct: 239 FENSGGSVQSDSDSISPG 256
>LIN39_CAEEL (P34684) Homeobox protein lin-39 (Abnormal cell lineage protein 39)| Length = 253 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%) Frame = +2 Query: 203 GGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRAR 376 GG ++++R ++ Q+ LE F T L ++++++A L L RQV IWFQN+R + Sbjct: 160 GGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMK 219 Query: 377 WKSKQLER 400 K + ++ Sbjct: 220 HKKENKDK 227
>HXA6_CHICK (Q5YLH5) Homeobox protein Hox-A6| Length = 231 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/67 (32%), Positives = 37/67 (55%) Frame = +2 Query: 188 ASGKKGGVMIDRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNK 367 A G++G ++ ++ Q LE F L R+++++A L L RQ+ IWFQN+ Sbjct: 151 AHGRRG------RQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNR 204 Query: 368 RARWKSK 388 R +WK + Sbjct: 205 RMKWKKE 211
>HXC6B_BRARE (Q9PWM5) Homeobox protein Hox-C6b| Length = 227 Score = 44.7 bits (104), Expect = 1e-04 Identities = 20/52 (38%), Positives = 30/52 (57%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 +S Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 142 YSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMKWKKE 193
>BSH_BRARE (Q6R3Q6) Brain-specific homeobox protein homolog| Length = 227 Score = 44.7 bits (104), Expect = 1e-04 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK R FS+ Q+ LE F Q L ++++LA L L QV WFQN+R + K KQL Sbjct: 106 RKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK-KQL 164 Query: 395 ER 400 + Sbjct: 165 RK 166
>NKX28_MOUSE (O70584) Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H)| (Homeobox protein Nkx-2.9) Length = 235 Score = 44.7 bits (104), Expect = 1e-04 Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 RK+R FS+ Q LE F Q L ++ QLAR L L P QV IWFQN R + K Sbjct: 82 RKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQNHRYKLK 137
>HMD1_CHICK (P46692) Homeobox protein CHOX-CAD| Length = 248 Score = 44.7 bits (104), Expect = 1e-04 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%) Frame = +2 Query: 185 PASGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWF 358 P++ G K R +++ Q LE F + R+K +LA LGL RQV IWF Sbjct: 126 PSTSSSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWF 185 Query: 359 QNKRARWK---SKQLERQ 403 QN+RA+ + K+L++Q Sbjct: 186 QNRRAKERKVNKKKLQQQ 203
>BSH_MOUSE (Q810B3) Brain-specific homeobox protein homolog| Length = 232 Score = 44.7 bits (104), Expect = 1e-04 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK R FS+ Q+ LE F Q L ++++LA L L QV WFQN+R + K KQL Sbjct: 111 RKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK-KQL 169 Query: 395 ER 400 + Sbjct: 170 RK 171
>GSCL_MOUSE (P56916) Homeobox protein goosecoid-like (GSC-2)| Length = 198 Score = 44.7 bits (104), Expect = 1e-04 Identities = 18/53 (33%), Positives = 36/53 (67%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQ 391 FSEEQ+++LE++F + + +LA + L+ +V +WF+N+RA+W+ ++ Sbjct: 127 FSEEQLQALEALFVQNQYPDVGTRERLAVRIRLREERVEVWFKNRRAKWRHQK 179
>BSH_CHICK (Q6RFL5) Brain-specific homeobox protein homolog| Length = 233 Score = 44.7 bits (104), Expect = 1e-04 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RK R FS+ Q+ LE F Q L ++++LA L L QV WFQN+R + K KQL Sbjct: 113 RKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK-KQL 171 Query: 395 ER 400 + Sbjct: 172 RK 173
>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)| Length = 606 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARW 379 RK R F++ Q+++LE F Q L +++ +LA +L L QV W+QN+R +W Sbjct: 332 RKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKW 386
>TLX3_MOUSE (O55144) T-cell leukemia homeobox protein 3 (Homeobox TLX-3)| (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein) Length = 291 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/59 (37%), Positives = 31/59 (52%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYA 409 FS QI LE F Q L ++ LA+ L + QV WFQN+R +W+ + E + A Sbjct: 173 FSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREA 231
>TLX3_HUMAN (O43711) T-cell leukemia homeobox protein 3 (Homeobox protein| Hox-11L2) Length = 291 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/59 (37%), Positives = 31/59 (52%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYA 409 FS QI LE F Q L ++ LA+ L + QV WFQN+R +W+ + E + A Sbjct: 173 FSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREA 231
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 44.7 bits (104), Expect = 1e-04 Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Frame = +2 Query: 188 ASGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQ 361 A+G G RK+R F++ Q LE F Q L ++ LA + L P QV IWFQ Sbjct: 535 ANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQ 594 Query: 362 NKRARWKSKQLERQY 406 N R + K Q E+ Y Sbjct: 595 NHRYKTKRAQNEKGY 609
>EMX2_HUMAN (Q04743) Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty| spiracles-like protein 2) Length = 252 Score = 44.7 bits (104), Expect = 1e-04 Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 4/131 (3%) Frame = +2 Query: 23 PSSLARPHTRDPFCFFPFLPTPDQVHDHRRDLAXXXXXXXXXXXXXXXXXXXXXPASGKK 202 P L RDP F+P+L +H +R P S Sbjct: 105 PHPLFASQQRDPSTFYPWL-----IHRYR-------------YLGHRFQGNDTSPESFLL 146 Query: 203 GGVMIDRKKR----FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKR 370 + + KR FS Q+ LE F + ++ QLA L L QV +WFQN+R Sbjct: 147 HNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRR 206 Query: 371 ARWKSKQLERQ 403 ++K ++LE + Sbjct: 207 TKFKRQKLEEE 217
>CAD_DROME (P09085) Homeotic protein caudal| Length = 427 Score = 44.3 bits (103), Expect = 2e-04 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 8/102 (7%) Frame = +2 Query: 185 PASGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWF 358 PA + G K R +++ Q LE + T + R+K +LA+ L L RQV IWF Sbjct: 262 PAQPQPGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWF 321 Query: 359 QNKRARWKSKQLERQ------YAALRDDYDALLSSYDQLKKG 466 QN+RA+ + + + DY LL + +L+ G Sbjct: 322 QNRRAKERKQNKKGSDPNVMGVGVQHADYSQLLDAKAKLEPG 363
>HXB7B_XENLA (P04476) Homeobox protein Hox-B7 B (XlHbox-2 B) (P52)| Length = 220 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +2 Query: 218 DRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 DRK+ ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 137 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 196
>HXA7_HETFR (Q9IA25) Homeobox protein Hox-A7| Length = 208 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +2 Query: 218 DRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 DRK+ ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 134 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 193
>HXA10_MORSA (Q9PWD6) Homeobox protein Hox-A10| Length = 289 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ Q LE F L ++L++++ + L RQV IWFQN+R + K Sbjct: 216 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVHLTDRQVKIWFQNRRMKLKKMTR 275 Query: 395 ERQYAALRDDY 427 E + L +Y Sbjct: 276 ENRIRELTSNY 286
>ISL2_RAT (P50480) Insulin gene enhancer protein ISL-2 (Islet-2)| Length = 360 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/53 (35%), Positives = 31/53 (58%) Frame = +2 Query: 236 SEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 +E+Q+ +L + +A + + K QL GL PR + +WFQNKR + K K + Sbjct: 200 NEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSI 252
>HXC6_MOUSE (P10629) Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1)| Length = 235 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/52 (38%), Positives = 30/52 (57%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 +S Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 148 YSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>HXC6_HUMAN (P09630) Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25)| Length = 235 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/52 (38%), Positives = 30/52 (57%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 +S Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 148 YSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>PITX1_CHICK (P56673) Pituitary homeobox 1 (cPTX1)| Length = 311 Score = 44.3 bits (103), Expect = 2e-04 Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 6/100 (6%) Frame = +2 Query: 185 PASGKKGGVMIDRKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWF 358 PA KK R++R F+ +Q++ LE+ F + + ++A L +V +WF Sbjct: 82 PAKKKK-----QRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWF 136 Query: 359 QNKRARWKSKQLERQYAALRDDY----DALLSSYDQLKKG 466 +N+RA+W+ ++ +Q ++ Y L+ YD + G Sbjct: 137 KNRRAKWRKRERNQQMDLCKNGYVPQFSGLMQPYDDMYAG 176
>HXB6_CHICK (P14839) Homeobox protein Hox-B6 (GHOX-2.2) (Fragment)| Length = 84 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/55 (34%), Positives = 32/55 (58%) Frame = +2 Query: 224 KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 ++ ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 11 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKE 65
>HXA5_SALSA (P09637) Homeobox protein Hox-A5 (S12-B) (Fragment)| Length = 78 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/54 (37%), Positives = 31/54 (57%) Frame = +2 Query: 221 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 R + ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK Sbjct: 4 RGQTYTRYQTLELEKEFHFNRYLTRRRRIEMAHALCLSERQIKIWFQNRRMKWK 57
>HXA4_SHEEP (Q28598) Homeobox protein Hox-A4 (Fragment)| Length = 87 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/50 (38%), Positives = 30/50 (60%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 382 ++ +Q+ LE F L R+++++A L L QV IWFQN+R +WK Sbjct: 2 YTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSEAQVKIWFQNRRMKWK 51
>HXC6_SHEEP (P49925) Homeobox protein Hox-C6| Length = 153 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/52 (38%), Positives = 30/52 (57%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 +S Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 66 YSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>HMB4_TRIGR (P10179) Homeobox protein HB4 (Fragment)| Length = 107 Score = 44.3 bits (103), Expect = 2e-04 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ Q LE F L ++L++AR L L RQV IWFQN+R + K + Sbjct: 43 RKKRCPYTKFQTLELEKEFLFNMYLTRDRRLEIARLLSLTERQVKIWFQNRRMKMKKQNR 102 Query: 395 ERQY 406 + Y Sbjct: 103 AQNY 106
>ISL2_MOUSE (Q9CXV0) Insulin gene enhancer protein ISL-2 (Islet-2)| Length = 359 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/53 (35%), Positives = 31/53 (58%) Frame = +2 Query: 236 SEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 +E+Q+ +L + +A + + K QL GL PR + +WFQNKR + K K + Sbjct: 199 NEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSI 251
>ISL2_HUMAN (Q96A47) Insulin gene enhancer protein ISL-2 (Islet-2)| Length = 359 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/53 (35%), Positives = 31/53 (58%) Frame = +2 Query: 236 SEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 +E+Q+ +L + +A + + K QL GL PR + +WFQNKR + K K + Sbjct: 199 NEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSI 251
>HXC5_MOUSE (P32043) Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2)| Length = 222 Score = 44.3 bits (103), Expect = 2e-04 Identities = 21/61 (34%), Positives = 32/61 (52%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + A Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSKEA 221 Query: 413 L 415 L Sbjct: 222 L 222
>HXC5_HUMAN (Q00444) Homeobox protein Hox-C5 (Hox-3D) (CP11)| Length = 222 Score = 44.3 bits (103), Expect = 2e-04 Identities = 21/61 (34%), Positives = 32/61 (52%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLERQYAA 412 ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + A Sbjct: 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSKEA 221 Query: 413 L 415 L Sbjct: 222 L 222
>HXB7_MOUSE (P09024) Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (MH-22B)| Length = 217 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +2 Query: 218 DRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 DRK+ ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 136 DRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>HXB7_HUMAN (P09629) Homeobox protein Hox-B7 (Hox-2C) (HHO.C1)| Length = 217 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +2 Query: 218 DRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 DRK+ ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 136 DRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 195
>HXB7_BOVIN (Q9TT89) Homeobox protein Hox-B7| Length = 217 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +2 Query: 218 DRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 DRK+ ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 136 DRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
>HXC6_XENLA (P02832) Homeobox protein Hox-C6 (XlHbox-1) (AC1) [Contains:| Homeobox protein Hox-C6 PRII; Homeobox protein Hox-C6 PRI] Length = 234 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/52 (38%), Positives = 30/52 (57%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 +S Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 148 YSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>HXA7_COTJA (P24061) Homeobox protein Hox-A7 (Quox-1)| Length = 242 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Frame = +2 Query: 218 DRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 DRK+ ++ Q LE F L R++++ A L L RQ+ IWFQN+R +WK + Sbjct: 128 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEYAHALCLTERQIKIWFQNRRMKWKKE 187 Query: 389 QLE 397 E Sbjct: 188 HKE 190
>HXA7_HUMAN (P31268) Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1)| Length = 230 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Frame = +2 Query: 218 DRKK---RFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 DRK+ ++ Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 129 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 188
>ISL2_CHICK (P53410) Insulin gene enhancer protein ISL-2 (Islet-2) (Fragment)| Length = 319 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/53 (35%), Positives = 31/53 (58%) Frame = +2 Query: 236 SEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 +E+Q+ +L + +A + + K QL GL PR + +WFQNKR + K K + Sbjct: 158 NEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSI 210
>HXC10_MOUSE (P31257) Homeobox protein Hox-C10 (Hox-3.6)| Length = 342 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ Q LE F L ++L++++ + L RQV IWFQN+R + K Sbjct: 269 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKKMNR 328 Query: 395 ERQYAALRDDYD 430 E + L +++ Sbjct: 329 ENRIRELTSNFN 340
>HXC10_HUMAN (Q9NYD6) Homeobox protein Hox-C10| Length = 342 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Frame = +2 Query: 221 RKKR--FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQL 394 RKKR +++ Q LE F L ++L++++ + L RQV IWFQN+R + K Sbjct: 269 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKKMNR 328 Query: 395 ERQYAALRDDYD 430 E + L +++ Sbjct: 329 ENRIRELTSNFN 340
>HXC6A_BRARE (P15862) Homeobox protein Hox-C6a (Hox-C6) (Zf-61)| Length = 231 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/52 (38%), Positives = 30/52 (57%) Frame = +2 Query: 233 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSK 388 +S Q LE F L R+++++A L L RQ+ IWFQN+R +WK + Sbjct: 149 YSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 200 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,316,892 Number of Sequences: 219361 Number of extensions: 473119 Number of successful extensions: 3084 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 3030 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3078 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
