>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 131     ccccgcgccggatcgcgcatcg 152
               ||||||||||||||||||||||
Sbjct: 4365151 ccccgcgccggatcgcgcatcg 4365172

>gb|AC167243.3| Mus musculus BAC clone RP24-144E2 from chromosome 9, complete sequence
          Length = 193364

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   ccatctcttctcccctccccc 134
             |||||||||||||||||||||
Sbjct: 20375 ccatctcttctcccctccccc 20355

>ref|NM_187942.1| Oryza sativa (japonica cultivar-group), Ozsa8362 predicted mRNA
          Length = 1782

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 171  gctgccgccggcgcgggaggc 191
            |||||||||||||||||||||
Sbjct: 1704 gctgccgccggcgcgggaggc 1724

>ref|XM_478450.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 453

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 171 gctgccgccggcgcgggaggc 191
           |||||||||||||||||||||
Sbjct: 335 gctgccgccggcgcgggaggc 355

>gb|AC137848.31| Mus musculus chromosome 9, clone RP24-118I23, complete sequence
          Length = 190317

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 114    ccatctcttctcccctccccc 134
              |||||||||||||||||||||
Sbjct: 150180 ccatctcttctcccctccccc 150200



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    ccatctcttctcccctcccc 133
              ||||||||||||||||||||
Sbjct: 150132 ccatctcttctcccctcccc 150151

>gb|AC123708.17| Mus musculus chromosome 9, clone RP23-366E1, complete sequence
          Length = 195563

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 114    ccatctcttctcccctccccc 134
              |||||||||||||||||||||
Sbjct: 185486 ccatctcttctcccctccccc 185466



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    ccatctcttctcccctcccc 133
              ||||||||||||||||||||
Sbjct: 185534 ccatctcttctcccctcccc 185515

>gb|AC123533.4| Mus musculus BAC clone RP23-269E2 from chromosome 14, complete sequence
          Length = 187119

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   tccatctcttctcccctcccc 133
             |||||||||||||||||||||
Sbjct: 29878 tccatctcttctcccctcccc 29898

>ref|XM_846405.1| PREDICTED: Canis familiaris similar to chondroitin sulfate
           proteoglycan 5 (neuroglycan C) (LOC609188), mRNA
          Length = 1455

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 180 ggcgcgggaggcgtccgcggccgtg 204
           ||||| |||||||||||||||||||
Sbjct: 96  ggcgctggaggcgtccgcggccgtg 120

>gb|AC101205.7| Mus musculus chromosome 14, clone RP23-178N17, complete sequence
          Length = 236164

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 113   tccatctcttctcccctcccc 133
             |||||||||||||||||||||
Sbjct: 83083 tccatctcttctcccctcccc 83063

>gb|AC110285.14| Homo sapiens chromosome 17, clone RP11-1055B8, complete sequence
          Length = 119991

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   tggaggcccctcggggctgcc 176
             |||||||||||||||||||||
Sbjct: 65986 tggaggcccctcggggctgcc 66006

>dbj|AK054933.1| Homo sapiens cDNA FLJ30371 fis, clone BRACE2007836
          Length = 1890

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 156  tggaggcccctcggggctgcc 176
            |||||||||||||||||||||
Sbjct: 1031 tggaggcccctcggggctgcc 1051

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 171      gctgccgccggcgcgggaggc 191
                |||||||||||||||||||||
Sbjct: 20178950 gctgccgccggcgcgggaggc 20178970

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 171     gctgccgccggcgcgggaggc 191
               |||||||||||||||||||||
Sbjct: 8714533 gctgccgccggcgcgggaggc 8714513

>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0699D11
          Length = 140825

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   gctgccgccggcgcgggaggc 191
             |||||||||||||||||||||
Sbjct: 31990 gctgccgccggcgcgggaggc 31970

>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1372_D12
          Length = 179898

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 171   gctgccgccggcgcgggaggc 191
             |||||||||||||||||||||
Sbjct: 81338 gctgccgccggcgcgggaggc 81358

>ref|XM_468763.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4371

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  ctggatctggatccggatcc 115
           ||||||||||||||||||||
Sbjct: 59  ctggatctggatccggatcc 78

>ref|XM_468762.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 450

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  ctggatctggatccggatcc 115
           ||||||||||||||||||||
Sbjct: 59  ctggatctggatccggatcc 78

>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence
          Length = 130987

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ggcgcgggatctgagccgcc 272
             ||||||||||||||||||||
Sbjct: 24332 ggcgcgggatctgagccgcc 24313

>ref|NM_177407.2| Mus musculus calcium/calmodulin-dependent protein kinase II alpha
            (Camk2a), transcript variant 2, mRNA
          Length = 4949

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 115  catctcttctcccctccccc 134
            ||||||||||||||||||||
Sbjct: 4751 catctcttctcccctccccc 4732

>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence
          Length = 101101

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 59    acttggagcatctctagcagaccc 82
             |||| |||||||||||||||||||
Sbjct: 90729 acttagagcatctctagcagaccc 90706

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 96       ctggatctggatccggatcc 115
                ||||||||||||||||||||
Sbjct: 17579741 ctggatctggatccggatcc 17579722



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 96       ctggatctggatccggatcc 115
                ||||||||||||||||||||
Sbjct: 17574260 ctggatctggatccggatcc 17574241

>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete
             sequence
          Length = 97152

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    ctggatctggatccggatcc 115
             ||||||||||||||||||||
Sbjct: 80817 ctggatctggatccggatcc 80836



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    ctggatctggatccggatcc 115
             ||||||||||||||||||||
Sbjct: 75336 ctggatctggatccggatcc 75355

>emb|CR626926.1| Aegilops tauschii
          Length = 94421

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 59    acttggagcatctctagcagaccc 82
             |||| |||||||||||||||||||
Sbjct: 80623 acttagagcatctctagcagaccc 80600

>gb|AC124448.4| Mus musculus BAC clone RP24-211A8 from chromosome 18, complete sequence
          Length = 159308

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    catctcttctcccctccccc 134
              ||||||||||||||||||||
Sbjct: 148854 catctcttctcccctccccc 148873

>gb|AC124431.4| Mus musculus BAC clone RP24-243J21 from chromosome 18, complete sequence
          Length = 143099

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    catctcttctcccctccccc 134
              ||||||||||||||||||||
Sbjct: 104804 catctcttctcccctccccc 104785

>emb|AL365230.8| Human DNA sequence from clone RP11-384G23 on chromosome 13, complete
             sequence
          Length = 99257

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   ccatctcttctcccctcccc 133
             ||||||||||||||||||||
Sbjct: 24530 ccatctcttctcccctcccc 24511

>emb|AL669869.10| Mouse DNA sequence from clone RP23-198E14 on chromosome 11 Contains the
              3' end of the Mgl2 gene for macrophage galactose
              N-acetyl-galactosamine specific lectin 2, the Mgl1 gene for
              macrophage galactose N-acetyl-galactosamine specific lectin
              1, the gene for a novel RNA polymerase Rpb1 C-terminal
              repeat domain containing protein, three novel genes, the
              Bcl6b gene for B-cell CLL/lymphoma 6 member B, the Alox12
              gene for arachidonate 12-lipoxygenase and four CpG islands,
              complete sequence
          Length = 174390

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      ctccatgctcttcctgcctc 24
              ||||||||||||||||||||
Sbjct: 109420 ctccatgctcttcctgcctc 109401

>emb|CR933731.5| Mouse DNA sequence from clone DN-160I24 on chromosome 11, complete
             sequence
          Length = 212982

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     ctccatgctcttcctgcctc 24
             ||||||||||||||||||||
Sbjct: 89446 ctccatgctcttcctgcctc 89427

>gb|AC093453.40| Canis familiaris strain Doberman Pinscher clone rp81-252i15, complete
             sequence
          Length = 140024

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   ggcgtccgcggccgtgcgag 208
             ||||||||||||||||||||
Sbjct: 36654 ggcgtccgcggccgtgcgag 36673

>gb|AC104137.5| Homo sapiens BAC clone RP11-807H7 from 4, complete sequence
          Length = 195930

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   atccatctcttctcccctcc 131
             ||||||||||||||||||||
Sbjct: 47064 atccatctcttctcccctcc 47045

>dbj|AK083245.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630031A06
            product:calcium/calmodulin-dependent protein kinase II
            alpha, full insert sequence
          Length = 4949

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 115  catctcttctcccctccccc 134
            ||||||||||||||||||||
Sbjct: 4751 catctcttctcccctccccc 4732

>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    ctcggggctgccgccggcgc 184
              ||||||||||||||||||||
Sbjct: 129196 ctcggggctgccgccggcgc 129215

>dbj|AK085608.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
            library, clone:D630046G10 product:unclassifiable, full
            insert sequence
          Length = 2588

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    ctccatgctcttcctgcctc 24
            ||||||||||||||||||||
Sbjct: 1884 ctccatgctcttcctgcctc 1903

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 96       ctggatctggatccggatcc 115
                ||||||||||||||||||||
Sbjct: 17573282 ctggatctggatccggatcc 17573263



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 96       ctggatctggatccggatcc 115
                ||||||||||||||||||||
Sbjct: 17567801 ctggatctggatccggatcc 17567782

>emb|AL805980.28| Mouse DNA sequence from clone RP23-49C8 on chromosome X, complete
             sequence
          Length = 172618

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   cccctcccccgcgccggatc 144
             ||||||||||||||||||||
Sbjct: 26058 cccctcccccgcgccggatc 26077

>gb|AC079610.4| Homo sapiens BAC clone RP11-105N14 from 2, complete sequence
          Length = 161031

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   gcttgggtttggtactatcc 310
             ||||||||||||||||||||
Sbjct: 89758 gcttgggtttggtactatcc 89739

>dbj|AK122410.2| Mus musculus mRNA for mKIAA0968 protein
          Length = 4791

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 115  catctcttctcccctccccc 134
            ||||||||||||||||||||
Sbjct: 4739 catctcttctcccctccccc 4720

>dbj|AB011076.1| Homo sapiens mRNA for UTF1, complete cds
          Length = 1197

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 174 gccgccggcgcgggaggcgtccgc 197
           ||||| ||||||||||||||||||
Sbjct: 672 gccgcgggcgcgggaggcgtccgc 649


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,935,763
Number of Sequences: 3902068
Number of extensions: 2935763
Number of successful extensions: 77434
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77063
Number of HSP's gapped (non-prelim): 371
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)