ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart51c12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 Score = 91.7 bits (46), Expect = 1e-16 Identities = 46/46 (100%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 799 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 526 agatcttcgtgaagaccctcaccggcaagaccatcacgcttgaggt 571 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 298 agatcttcgtgaagaccctcaccggcaagaccatcacgcttgaggt 343 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 70 agatcttcgtaaagaccctcaccggcaagaccatcaccctcgaggttga 118 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||| ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 982 agatttttgtcaagaccctcactggcaagaccatcaccctggaggt 1027
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 89.7 bits (45), Expect = 5e-16 Identities = 48/49 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 28018936 agatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttga 28018984 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 27575670 agatctttgtgaagacactcactggcaagaccatcaccctcgaggttga 27575622 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || ||||||||||| |||||||||||||| Sbjct: 28020304 agatcttcgtgaagaccctgactggcaagaccattacccttgaggttga 28020352 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| ||||||||||||||||| |||||||| Sbjct: 28020076 agatcttcgtcaagaccctgaccggcaagaccatcacgcttgaggt 28020121 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| |||||||||||||||||||| ||||| Sbjct: 28019620 agatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggt 28019665 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| || |||||||||||||| |||||||| Sbjct: 28019848 agatcttcgtcaagaccctgactggcaagaccatcacacttgaggt 28019893 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||| | || ||||||||||||||||||||||| Sbjct: 28019392 agatcttcgtcaagaccttgactggcaagaccatcacccttgaggt 28019437 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||| | || ||||||||||||||||||||||| Sbjct: 28019164 agatcttcgtcaagaccttgactggcaagaccatcacccttgaggt 28019209 Score = 44.1 bits (22), Expect = 0.026 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttg 42 ||||||||||||||||| | || || ||||||||||| |||| Sbjct: 27575442 agatctttgtgaagaccttgacaggaaagaccatcactcttg 27575401 Score = 36.2 bits (18), Expect = 6.4 Identities = 39/46 (84%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| |||||||| || || || ||||||||||| || ||||| Sbjct: 26202057 agatcttcgtgaagacgctgacggggaagaccatcactctcgaggt 26202102
>gb|AF184279.1|AF184279 Oryza sativa polyubiquitin (RUBQ1) gene, complete cds Length = 3184 Score = 89.7 bits (45), Expect = 5e-16 Identities = 48/49 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1706 agatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttga 1754 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || ||||||||||| |||||||||||||| Sbjct: 2846 agatcttcgtgaagaccctgactggcaagaccattacccttgaggttga 2894 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| ||||||||||||||||| |||||||| Sbjct: 2618 agatcttcgtcaagaccctgaccggcaagaccatcacgcttgaggt 2663 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| |||||||||||||||||||| ||||| Sbjct: 2390 agatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggt 2435 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||| | || ||||||||||||||||||||||| Sbjct: 1934 agatcttcgtcaagaccttgactggcaagaccatcacccttgaggt 1979 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||| | || ||||||||||||||||| ||||| Sbjct: 2162 agatcttcgtcaagaccttgactggcaagaccatcaccctcgaggt 2207
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 89.7 bits (45), Expect = 5e-16 Identities = 48/49 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 63755 agatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttga 63803 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || ||||||||||| |||||||||||||| Sbjct: 65123 agatcttcgtgaagaccctgactggcaagaccattacccttgaggttga 65171 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| ||||||||||||||||| |||||||| Sbjct: 64895 agatcttcgtcaagaccctgaccggcaagaccatcacgcttgaggt 64940 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| |||||||||||||||||||| ||||| Sbjct: 64439 agatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggt 64484 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| || |||||||||||||| |||||||| Sbjct: 64667 agatcttcgtcaagaccctgactggcaagaccatcacacttgaggt 64712 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||| | || ||||||||||||||||||||||| Sbjct: 64211 agatcttcgtcaagaccttgactggcaagaccatcacccttgaggt 64256 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||| | || ||||||||||||||||||||||| Sbjct: 63983 agatcttcgtcaagaccttgactggcaagaccatcacccttgaggt 64028
>dbj|AK121590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037P03, full insert sequence Length = 1983 Score = 89.7 bits (45), Expect = 5e-16 Identities = 48/49 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 76 agatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttga 124 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| ||||||||||||||||| |||||||| Sbjct: 1216 agatcttcgtcaagaccctgaccggcaagaccatcacgcttgaggt 1261 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| |||||||||||||||||||| ||||| Sbjct: 760 agatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggt 805 Score = 58.0 bits (29), Expect = 2e-06 Identities = 38/41 (92%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||| || ||||||||||| |||||||||||||| Sbjct: 1452 gtgaagaccctgactggcaagaccattacccttgaggttga 1492 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| || |||||||||||||| |||||||| Sbjct: 988 agatcttcgtcaagaccctgactggcaagaccatcacacttgaggt 1033 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||| | || ||||||||||||||||||||||| Sbjct: 532 agatcttcgtcaagaccttgactggcaagaccatcacccttgaggt 577 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||| | || ||||||||||||||||||||||| Sbjct: 304 agatcttcgtcaagaccttgactggcaagaccatcacccttgaggt 349
>gb|U37687.1|OSU37687 Oryza sativa polyubiquitin (Rubq1) mRNA, complete cds Length = 1679 Score = 89.7 bits (45), Expect = 5e-16 Identities = 48/49 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 58 agatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttga 106 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || ||||||||||| |||||||||||||| Sbjct: 1198 agatcttcgtgaagaccctgactggcaagaccattacccttgaggttga 1246 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || ||||||||||| |||||||||||||| Sbjct: 970 agatcttcgtgaagaccctgactggcaagaccattacccttgaggttga 1018 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| |||||||||||||||||||| ||||| Sbjct: 742 agatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggt 787 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||| | || ||||||||||||||||||||||| Sbjct: 286 agatcttcgtcaagaccttgactggcaagaccatcacccttgaggt 331 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||| | || ||||||||||||||||| ||||| Sbjct: 514 agatcttcgtcaagaccttgactggcaagaccatcaccctcgaggt 559
>ref|XM_522865.1| PREDICTED: Pan troglodytes similar to ubiquitin A-52 residue ribosomal protein fusion product 1 (LOC467468), mRNA Length = 444 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 65 agatctttgtgaagaccctcacgggcaagaccatcacccttgaggt 110
>ref|XM_528575.1| PREDICTED: Pan troglodytes similar to ubiquitin A-52 residue ribosomal protein fusion product 1 (LOC473205), mRNA Length = 1311 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 59 agatctttgtgaagaccctcacgggcaagaccatcacccttgaggt 104
>gb|DQ216252.1| Taeniopygia guttata clone 0058P0005E02 ubiquitin C variant 12-like mRNA, complete sequence Length = 1378 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 301 agatctttgtgaagaccctgaccggcaagaccatcacccttgaggt 346 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 118 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| ||||||||||||||||| |||||||| Sbjct: 757 agatcttcgtcaagaccctgaccggcaagaccatcactcttgaggt 802 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || ||||||||||||||||| || ||||| Sbjct: 985 agatcttcgtgaagaccctgactggcaagaccatcaccctggaagttga 1033 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 529 agatcttcgtcaagaccctgaccggcaagaccatcaccctggaagttga 577
>gb|DQ216241.1| Taeniopygia guttata clone 0058P0057E02 ubiquitin C variant 2-like mRNA, complete sequence Length = 1373 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgaccggcaagaccatcacccttgaggt 118 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 757 agatctttgtgaagaccctgactggcaagaccatcactctcgaggt 802 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 529 agatcttcgtcaagaccctgaccggcaagaccatcaccctggaagttga 577 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || |||| ||||||||| || ||||| Sbjct: 985 agatctttgtgaagaccctgactggcaggaccatcactctcgaggt 1030 Score = 44.1 bits (22), Expect = 0.026 Identities = 34/38 (89%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 309 gtgaaaaccctgaccggcaagaccatcactctcgaggt 346
>gb|DQ216240.1| Taeniopygia guttata clone 0061P0001C12 ubiquitin C variant 2-like mRNA, complete sequence Length = 1530 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgaccggcaagaccatcacccttgaggt 118 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 986 agatctttgtgaagaccctgactggcaagaccatcactctcgaggt 1031 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 529 agatcttcgtcaagaccctgaccggcaagaccatcaccctggaagttga 577 Score = 52.0 bits (26), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 5 ctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||| || |||||||||||||| || ||||| Sbjct: 762 ctttgtgaagaccctgactggcaagaccatcactctcgaggt 803 Score = 44.1 bits (22), Expect = 0.026 Identities = 34/38 (89%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 309 gtgaaaaccctgaccggcaagaccatcactctcgaggt 346
>gb|DQ216239.1| Taeniopygia guttata clone 0058P0040D01 ubiquitin C variant 2-like mRNA, complete sequence Length = 1376 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgaccggcaagaccatcacccttgaggt 118 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 757 agatctttgtgaagaccctgactggcaagaccatcactctcgaggt 802 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 529 agatcttcgtcaagaccctgaccggcaagaccatcaccctggaagttga 577 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || |||| ||||||||| || ||||| Sbjct: 985 agatctttgtgaagaccctgactggcaggaccatcactctcgaggt 1030 Score = 44.1 bits (22), Expect = 0.026 Identities = 34/38 (89%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 309 gtgaaaaccctgaccggcaagaccatcactctcgaggt 346
>gb|DQ216236.1| Taeniopygia guttata clone 0058P0054D08 ubiquitin C variant 1-like mRNA, complete sequence Length = 1150 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgaccggcaagaccatcacccttgaggt 118 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 529 agatctttgtgaagaccctgaccggcaagaccatcactctcgaggt 574 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| || |||||||||||||| |||||||| Sbjct: 301 agatcttcgtgaaaaccctgactggcaagaccatcactcttgaggt 346 Score = 50.1 bits (25), Expect = 4e-04 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || |||||||| || ||||||||||||||||| || ||||| Sbjct: 757 agatcttcgtcaagaccctgactggcaagaccatcaccctggaagttga 805
>gb|DQ216235.1| Taeniopygia guttata clone 0058P0048G02 ubiquitin C variant 1-like mRNA, complete sequence Length = 1305 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgaccggcaagaccatcacccttgaggt 118 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 758 agatctttgtgaagaccctgactggcaagaccatcaccctggaagttga 806 Score = 50.1 bits (25), Expect = 4e-04 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || |||||||| || ||||||||||||||||| || ||||| Sbjct: 529 agatcttcgtcaagaccctgacgggcaagaccatcaccctggaagttga 577 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| || |||||||||||||| || ||||| Sbjct: 301 agatcttcgtgaaaaccctgactggcaagaccatcactctcgaggt 346
>emb|AL354709.15| Human DNA sequence from clone RP11-145E5 on chromosome 9 Contains the 5' end of the CDKN2B gene for cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4), a ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52) (RPL40) pseudogene, the 3' end of a variant of the MTAP gene for methylthioadenosine phosphorylase (MSAP), a novel gene and a CpG island, complete sequence Length = 157533 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3745 agatctttgtgaagaccctcacgggcaagaccatcacccttgaggt 3790
>gb|AC000049.11| Homo sapiens Chromosome 9p21 Cosmid Clone c86, complete sequence Length = 44160 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 21950 agatctttgtgaagaccctcacgggcaagaccatcacccttgaggt 21905
>ref|NG_002524.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 3 (UBA52P3) on chromosome 14 Length = 721 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 148 agatctttgtgaagaccctcacgggcaagaccatcacccttgaggt 193
>emb|AL121579.4|CNS01DRX Human chromosome 14 DNA sequence BAC R-349A22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 161771 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 93174 agatctttgtgaagaccctcacgggcaagaccatcacccttgaggt 93219
>emb|Z49056.1|CJUBIQ C.jacchus mRNA for ubiquitin Length = 189 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 5 agatctttgtgaagaccctcacaggcaagaccatcacccttgaggt 50
>dbj|AB060808.1| Homo sapiens gene for p16/CDKN2A, complete cds Length = 250000 Score = 83.8 bits (42), Expect = 3e-14 Identities = 45/46 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 229547 agatctttgtgaagaccctcacgggcaagaccatcacccttgaggt 229592
>ref|XM_473982.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 689 agatcttcgtgaagaccctcaccggcaagaccatcaccctggaggttga 737 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||| |||||||||||||| || |||||||| Sbjct: 917 agatcttcgtgaagaccctcactggcaagaccatcactctggaggttga 965 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 241 gtgaagaccctcaccggcaagaccattaccctggaggt 278 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||| |||||| | |||||||| Sbjct: 461 agatctttgtgaagacccttactggcaagacgatcaccttggaggttga 509 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||| ||||||||||||||| | |||||||| Sbjct: 16 aagaccctcactggcaagaccatcaccttggaggttga 53
>emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin Length = 1673 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 49 agatctttgtgaagaccctcacgggcaagaccatcaccctcgaggttga 97 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || ||||||||||| |||||||||||||| Sbjct: 1189 agatcttcgtgaagaccctgactggcaagaccattacccttgaggttga 1237 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| ||||||||||||||||| |||||||| Sbjct: 961 agatcttcgtcaagaccctgaccggcaagaccatcacgcttgaggt 1006 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| |||||||||||||||||||| ||||| Sbjct: 733 agatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggt 778 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||| | || ||||||||||||||||||||||| Sbjct: 505 agatcttcgtcaagaccttgactggcaagaccatcacccttgaggt 550 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||| | || ||||||||||||||||||||||| Sbjct: 277 agatcttcgtcaagaccttgactggcaagaccatcacccttgaggt 322
>gb|DQ420617.1| Anser anser ubiquitin C II mRNA, complete cds Length = 1199 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 778 agatctttgtgaagaccctgactggcaagaccatcacccttgaggttga 826 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 550 agatctttgtgaagaccctgactggcaagaccatcacccttgaggttga 598 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 322 agatctttgtgaagaccctgactggcaagaccatcacccttgaggttga 370 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 94 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 139
>gb|DQ420616.1| Anser anser ubiquitin C I mRNA, complete cds Length = 1191 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 778 agatctttgtgaagaccctgactggcaagaccatcacccttgaggttga 826 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 550 agatctttgtgaagaccctgactggcaagaccatcacccttgaggttga 598 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 322 agatctttgtgaagaccctgactggcaagaccatcacccttgaggttga 370 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 94 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 139
>gb|AY034031.1| Alstroemeria hybrid cultivar 'Samora' ubiquitin mRNA, partial cds Length = 278 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 152 agatctttgttaagaccctcactggcaagaccatcacccttgaggttga 200
>gb|U57603.1|GGU57603 Gallus gallus polyubiquitin (UbI) mRNA, partial cds Length = 352 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 145 agatctttgtgaagaccctgactggcaagaccatcacccttgaggttga 193
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 31998359 agatcttcgtgaagaccctcaccggcaagaccatcaccctggaggttga 31998407 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||| |||||||||||||| || |||||||| Sbjct: 31998587 agatcttcgtgaagaccctcactggcaagaccatcactctggaggttga 31998635 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 31997911 gtgaagaccctcaccggcaagaccattaccctggaggt 31997948 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||| |||||| | |||||||| Sbjct: 31998131 agatctttgtgaagacccttactggcaagacgatcaccttggaggttga 31998179 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||| ||||||||||||||| | |||||||| Sbjct: 31997686 aagaccctcactggcaagaccatcaccttggaggttga 31997723
>gb|AY228477.1| Anas platyrhynchos polyubiquitin gene, partial cds Length = 345 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 113 agatctttgtgaagaccctcactggcaagacaatcacccttgaggttga 161
>gb|AY228476.1| Anas platyrhynchos polyubiquitin gene, partial cds Length = 345 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 113 agatctttgtgaagaccctgactggcaagaccatcacccttgaggttga 161
>gb|AY954394.1| Oryza sativa (japonica cultivar-group) polyubiquitin (rubi3) gene, promoter region and complete cds Length = 3733 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 3205 agatcttcgtgaagaccctcaccggcaagaccatcaccctggaggttga 3253 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||| |||||||||||||| || |||||||| Sbjct: 3433 agatcttcgtgaagaccctcactggcaagaccatcactctggaggttga 3481 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 2757 gtgaagaccctcaccggcaagaccattaccctggaggt 2794 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||| |||||| | |||||||| Sbjct: 2977 agatctttgtgaagacccttactggcaagacgatcaccttggaggttga 3025 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||| ||||||||||||||| | |||||||| Sbjct: 2532 aagaccctcactggcaagaccatcaccttggaggttga 2569
>dbj|AK102389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092E11, full insert sequence Length = 2497 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 1898 agatcttcgtgaagaccctcaccggcaagaccatcaccctggaggttga 1946 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||| |||||||||||||| || |||||||| Sbjct: 2126 agatcttcgtgaagaccctcactggcaagaccatcactctggaggttga 2174 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1451 gtgaagaccctcaccggcaagaccattaccctggaggt 1488 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||| |||||| | |||||||| Sbjct: 1670 agatctttgtgaagacccttactggcaagacgatcaccttggaggttga 1718 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||| ||||||||||||||| | |||||||| Sbjct: 1226 aagaccctcactggcaagaccatcaccttggaggttga 1263
>dbj|D12776.1|RICPOLYUBI Oryza sativa (japonica cultivar-group) mRNA for poly-ubiquitin, partial cds Length = 744 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 113 agatcttcgtgaagaccctcaccggcaagaccatcaccctggaggttga 161 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||| |||||||||||||| || |||||||| Sbjct: 341 agatcttcgtgaagaccctcactggcaagaccatcactctggaggttga 389
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 81.8 bits (41), Expect = 1e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 19066 agatcttcgtgaagaccctcaccggcaagaccatcaccctggaggttga 19114 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||| |||||||||||||| || |||||||| Sbjct: 19294 agatcttcgtgaagaccctcactggcaagaccatcactctggaggttga 19342 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 18618 gtgaagaccctcaccggcaagaccattaccctggaggt 18655 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || |||||||| |||||| | |||||||| Sbjct: 18838 agatctttgtgaagacccttactggcaagacgatcaccttggaggttga 18886 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||| ||||||||||||||| | |||||||| Sbjct: 18393 aagaccctcactggcaagaccatcaccttggaggttga 18430
>gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, complete sequence Length = 151712 Score = 79.8 bits (40), Expect = 5e-13 Identities = 43/44 (97%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgag 44 |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 70213 agatctttgtgaagaccctcacaggcaagaccatcacccttgag 70170
>gb|DQ118117.1| Lupinus albus polyubiquitin mRNA, partial cds Length = 397 Score = 79.8 bits (40), Expect = 5e-13 Identities = 43/44 (97%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 109 atctttgtcaagaccctcaccggcaagaccatcacccttgaggt 152 Score = 63.9 bits (32), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 337 atctttgtcaagacccttaccggaaagaccatcacccttgaggt 380
>gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, complete sequence Length = 200622 Score = 79.8 bits (40), Expect = 5e-13 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgag 44 |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 164450 agatctttgtgaagaccctcacaggcaagaccatcacccttgag 164493
>gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q24.2, complete sequence Length = 170376 Score = 79.8 bits (40), Expect = 5e-13 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgag 44 |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 102592 agatctttgtgaagaccctcacaggcaagaccatcacccttgag 102635
>gb|AY297059.1| Triticum aestivum ubiquitin (WUB1) mRNA, complete cds Length = 450 Score = 79.8 bits (40), Expect = 5e-13 Identities = 43/44 (97%) Strand = Plus / Plus Query: 6 tttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10 tttgtgaagaccctcaccggcaagaccatcaccctggaggttga 53
>gb|DQ216253.1| Taeniopygia guttata clone 0058P0031B03 ubiquitin C variant 14-like mRNA, complete sequence Length = 1327 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 118 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 529 agatctttgtgaagaccctgaccggcaagaccatcaccctggaagttga 577 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| |||||||||||||||||||| || ||||| Sbjct: 301 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaagttga 349 Score = 50.1 bits (25), Expect = 4e-04 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || |||||||| || ||||||||||||||||| || ||||| Sbjct: 757 agatcttcgtcaagaccctgactggcaagaccatcaccctggaagttga 805
>gb|DQ216251.1| Taeniopygia guttata clone 0063P0020H09 ubiquitin C variant 10-like mRNA, complete sequence Length = 716 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 146 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 191
>gb|DQ216250.1| Taeniopygia guttata clone 0058P0027F01 ubiquitin C variant 9-like mRNA, complete sequence Length = 1074 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 118 Score = 56.0 bits (28), Expect = 7e-06 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatca 36 ||||||| ||||||||||| |||||||||||||||| Sbjct: 301 agatcttcgtgaagaccctgaccggcaagaccatca 336 Score = 50.1 bits (25), Expect = 4e-04 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || |||||||| || ||||||||||||||||| || ||||| Sbjct: 529 agatcttcgtcaagaccctgactggcaagaccatcaccctggaagttga 577
>gb|DQ216249.1| Taeniopygia guttata clone 0058P0031D03 ubiquitin C variant 9-like mRNA, complete sequence Length = 1327 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 118 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 529 agatctttgtgaagaccctgaccggcaagaccatcaccctggaagttga 577 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| |||||||||||||||||||| || ||||| Sbjct: 301 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaagttga 349 Score = 44.1 bits (22), Expect = 0.026 Identities = 34/38 (89%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||| || ||||||||||||||||| || ||||| Sbjct: 768 aagaccctgactggcaagaccatcaccctggaagttga 805
>gb|DQ216248.1| Taeniopygia guttata clone 0058P0029E05 ubiquitin C variant 8-like mRNA, complete sequence Length = 1378 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 118 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| ||||||||||||||||| |||||||| Sbjct: 757 agatcttcgtcaagaccctgaccggcaagaccatcactcttgaggt 802 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || ||||||||||||||||| || ||||| Sbjct: 985 agatcttcgtgaagaccctgactggcaagaccatcaccctggaagttga 1033 Score = 56.0 bits (28), Expect = 7e-06 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| || |||||||| |||||||||||||||||||| Sbjct: 529 agatcttcgtcaagaccctgaccggcaagaccatcaccct 568 Score = 38.2 bits (19), Expect = 1.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccct 19 ||||||||||||||||||| Sbjct: 301 agatctttgtgaagaccct 319
>gb|DQ216247.1| Taeniopygia guttata clone 0058P0020E12 ubiquitin C variant 7-like mRNA, complete sequence Length = 1383 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 757 agatctttgtgaagaccctgaccggcaagaccatcactcttgaggt 802 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 118 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 529 agatctttgtgaagaccctgaccggcaagaccatcaccctggaagttga 577 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| |||||||||||||||||||| || ||||| Sbjct: 301 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaagttga 349 Score = 50.1 bits (25), Expect = 4e-04 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || |||||||| || ||||||||||||||||| || ||||| Sbjct: 985 agatcttcgtcaagaccctgactggcaagaccatcaccctggaagttga 1033
>gb|DQ216246.1| Taeniopygia guttata clone 0058P0016A01 ubiquitin C variant 7-like mRNA, complete sequence Length = 1377 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 757 agatctttgtgaagaccctgaccggcaagaccatcactcttgaggt 802 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 118 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 529 agatctttgtgaagaccctgaccggcaagaccatcaccctggaagttga 577 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| |||||||||||||||||||| || ||||| Sbjct: 301 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaagttga 349 Score = 50.1 bits (25), Expect = 4e-04 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || |||||||| || ||||||||||||||||| || ||||| Sbjct: 985 agatcttcgtcaagaccctgactggcaagaccatcaccctggaagttga 1033
>gb|DQ216237.1| Taeniopygia guttata clone 0058P0020B09 ubiquitin C variant 1-like mRNA, complete sequence Length = 1346 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 118 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 529 agatctttgtgaagaccctgactggcaagaccatcaccctggaagttga 577 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||| |||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 757 agatttttgtgaagaccctgactggcaagaccatcaccctggaagttga 805 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 301 agatcttcgtgaaaaccctgaccggcaagaccatcactctcgaggt 346
>gb|DQ216234.1| Taeniopygia guttata clone 0058P0013A07 ubiquitin C variant 1-like mRNA, complete sequence Length = 1347 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 118 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 529 agatctttgtgaagaccctgactggcaagaccatcaccctggaagttga 577 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||| |||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 757 agatttttgtgaagaccctgactggcaagaccatcaccctggaagttga 805 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 301 agatcttcgtgaaaaccctgaccggcaagaccatcactctcgaggt 346
>gb|DQ216233.1| Taeniopygia guttata clone 0063P0008C04 ubiquitin C variant 1-like mRNA, complete sequence Length = 1305 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 118 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 529 agatctttgtgaagaccctgactggcaagaccatcaccctggaagttga 577 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| || ||||||||||||||| Sbjct: 757 agatcttcgtgaagaccctgactggcaagaccatcacc 794 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 301 agatcttcgtgaaaaccctgaccggcaagaccatcactctcgaggt 346
>gb|DQ216232.1| Taeniopygia guttata clone 0058P0060G06 ubiquitin C variant 1-like mRNA, complete sequence Length = 1306 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 73 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 118 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| || ||||| Sbjct: 529 agatctttgtgaagaccctgactggcaagaccatcaccctggaagttga 577 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || ||||||||||||||||| || ||||| Sbjct: 758 agatcttcgtgaagaccctgactggcaagaccatcaccctggaagttga 806 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 301 agatcttcgtgaaaaccctgaccggcaagaccatcactctcgaggt 346
>ref|XM_527693.1| PREDICTED: Pan troglodytes similar to ubiquitin A-52 residue ribosomal protein fusion product 1 (LOC472318), mRNA Length = 486 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 5 agatctttgtgaagaccctcacaggcaagaccatcaccctcgaggt 50
>gb|BT016557.1| Zea mays clone Contig390 mRNA sequence Length = 981 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 44 agatctttgtgaagaccctcaccggcaagactatcaccctcgaggt 89 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| |||||| | || |||||||| |||||||||||||| Sbjct: 500 agatctttgtcaagaccttgactggcaagacaatcacccttgaggt 545 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| |||||| | || |||||||| |||||||||||||| Sbjct: 272 agatctttgtcaagaccttgactggcaagacaatcacccttgaggt 317
>gb|AY751539.1| Cloning vector pHUE, complete sequence Length = 5942 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 172 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 217
>ref|XM_878714.1| PREDICTED: Bos taurus similar to ribosomal protein S27a, transcript variant 2 (LOC615199), mRNA Length = 1172 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 23 agatctttgtgaagaccctgacgggcaagaccatcacccttgaggt 68
>ref|NM_001033930.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), transcript variant 1, mRNA Length = 2823 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 119 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 164
>ref|NM_003333.3| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), transcript variant 2, mRNA Length = 2801 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 97 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 142
>gb|DQ473431.1| Anser anser breed Landoise polyubiquitin mRNA, complete cds Length = 1148 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 95 agatctttgtgaagaccctgactggcaagaccatcacccttgaggt 140 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 779 agatcttcgtgaagactctgactggcaagaccatcacccttgaggttga 827 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 551 agatcttcgtgaagactctgactggcaagaccatcacccttgaggttga 599 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 323 agatcttcgtgaagactctgactggcaagaccatcacccttgaggttga 371
>gb|AY563026.1| Ovis aries ubiqitin RPL40 fusion protein mRNA, complete cds Length = 484 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 5 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 50
>ref|XM_848237.1| PREDICTED: Canis familiaris similar to ubiquitin C (LOC610695), mRNA Length = 501 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 62 agatctttgtgaagaccctcaccggcaagaccatgaccctcgaggt 107
>gb|DQ479851.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52) gene, complete cds Length = 9411 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 3257 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 3302
>gb|AC005165.1| Homo sapiens BAC clone CTA-242H14 from 7, complete sequence Length = 155164 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 26798 agatctttgtgaagaccctcacaggcaagaccatcaccctcgaggt 26753
>gb|AC146016.2| Pan troglodytes BAC clone RP43-131D21 from 7, complete sequence Length = 169393 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 79456 agatctttgtgaagaccctcacaggcaagaccatcaccctcgaggt 79411
>gb|BC019044.1| Homo sapiens cDNA clone IMAGE:4635339, **** WARNING: chimeric clone **** Length = 2503 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 719 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 674
>emb|X67957.1|AMUBIQMRP A.majus mRNA for ubiquitin (partial) Length = 1094 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 208 agatctttgtgaagactctgaccggcaagaccatcacccttgaggt 253 Score = 56.0 bits (28), Expect = 7e-06 Identities = 40/44 (90%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||| | |||||||||||||| ||||| ||||| Sbjct: 438 atctttgtgaagaccttgaccggcaagaccattaccctcgaggt 481 Score = 50.1 bits (25), Expect = 4e-04 Identities = 25/25 (100%) Strand = Plus / Plus Query: 22 ccggcaagaccatcacccttgaggt 46 ||||||||||||||||||||||||| Sbjct: 1 ccggcaagaccatcacccttgaggt 25
>emb|X69422.1|AFTETUBI A.fatua mRNA for tetraubiquitin Length = 1196 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 37 agatctttgtgaagaccctcactggcaagaccatcacacttgaggt 82 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 265 agatcttcgtcaagaccctcaccggcaagaccatcaccctggaggttga 313 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || ||||||||||| ||||||||||||||| | |||||||| Sbjct: 721 agatcttcgtcaagaccctcactggcaagaccatcaccttagaggttga 769 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || ||||||||||| || |||||||||||||| |||||||| Sbjct: 493 agatcttcgtcaagaccctcactggtaagaccatcaccctggaggttga 541
>emb|X56803.1|TAMRNAU T.aestivum L. mRNA for ubiquitin Length = 436 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 7 agatatttgtgaagaccctcaccggcaagaccatcaccctggaggt 52
>emb|X56601.1|TAUBIQU Wheat mRNA for ubiquitin Length = 436 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 7 agatatttgtgaagaccctcaccggcaagaccatcaccctggaggt 52
>emb|CR857299.1| Pongo pygmaeus mRNA; cDNA DKFZp469J2422 (from clone DKFZp469J2422) Length = 554 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 69 agatctttgtgaagaccctcacgggcaaaaccatcacccttgaggt 114
>emb|CR624915.1| full-length cDNA clone CS0DE004YN17 of Placenta of Homo sapiens (human) Length = 1187 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 742 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 787
>emb|CR605557.1| full-length cDNA clone CS0DI053YA13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 490 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 17 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 62
>gb|AF506969.1| Equus caballus ubiquitin mRNA, complete cds Length = 1157 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 123 agatctttgtgaagaccctgaccggcaagaccatcaccctggaggt 168 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||| |||||||||||||||||||| ||||| Sbjct: 815 gtgaagaccctgaccggcaagaccatcaccctggaggt 852 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||| |||||||||||||||||||| ||||| Sbjct: 359 gtgaagaccctgaccggcaagaccatcaccctggaggt 396 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||| |||||||||||||| ||||| ||||| Sbjct: 587 gtgaagaccctgaccggcaagaccattaccctggaggt 624
>dbj|D28123.1|SOYSUBI3 Glycine max SUBI-3 gene for ubiquitin, complete cds Length = 2170 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 924 agatcttcgtcaagaccctcaccggcaagaccatcacccttgaggt 969 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || ||||| ||||||||||||||||| ||||| |||||||| Sbjct: 1152 agatcttcgttaagacactcaccggcaagaccataaccctagaggttga 1200 Score = 48.1 bits (24), Expect = 0.002 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 1380 agatcttcgttaagaccctcaccggcaagactattaccct 1419
>gb|BC102248.1| Bos taurus cDNA clone MGC:127041 IMAGE:7941775, complete cds Length = 626 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 42 agatctttgtgaagaccctgacgggcaagaccatcacccttgaggt 87
>gb|S82312.1|S82312S1 Zea mays polyubiquitin homolog mRNA, partial cds Length = 199 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 89 agatctttgtgaagaccctcaccggcaagactatcaccctcgaggt 134
>ref|NG_001207.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 1 (UBA52P1) on chromosome 7 Length = 675 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 116 agatctttgtgaagaccctcacaggcaagaccatcaccctcgaggt 161
>gb|AF348700.1|AF348700 Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), mRNA, complete cds Length = 536 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 46 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 91
>gb|AY842446.1| Bubalus bubalis ubiquitin/ribosomal fusion protein mRNA, complete cds Length = 543 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 37 agatctttgtgaagaccctgacgggcaagaccatcacccttgaggt 82
>dbj|AB071067.1| Macaca fascicularis testis cDNA clone:QtsA-16192, similar to human ubiquitin B precursor ( UBB ), mRNA, NM_018955.1 Length = 883 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 41 agatcttcgtgaagaccctgaccggcaagaccatcacccttgaggt 86 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 269 agatcttcgtgaagaccctgaccggcaagaccatcaccct 308 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 497 agatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggt 542
>ref|NM_001009202.1| Ovis aries polyubiquitin (LOC443016), mRNA Length = 1102 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 784 agatctttgtgaagaccctgaccggcaagaccatcaccctggaggt 829 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 556 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 601 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 328 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 373 Score = 56.0 bits (28), Expect = 7e-06 Identities = 40/44 (90%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 102 atcttcgtgaaaaccctgaccggcaagaccatcaccctggaggt 145
>ref|NM_001009286.1| Ovis aries ubiqitin RPL40 fusion protein (OVUBQ-L40), mRNA Length = 484 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 5 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 50
>ref|NM_214211.1| Sus scrofa ubiquitin/ribosomal fusion protein (UBA52), mRNA Length = 524 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 40 agatctttgtgaagaccctgacgggcaagaccatcacccttgaggt 85
>gb|AF038129.1|AF038129 Ovis aries polyubiquitin mRNA, complete cds Length = 1102 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 784 agatctttgtgaagaccctgaccggcaagaccatcaccctggaggt 829 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 556 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 601 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 328 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 373 Score = 56.0 bits (28), Expect = 7e-06 Identities = 40/44 (90%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 102 atcttcgtgaaaaccctgaccggcaagaccatcaccctggaggt 145
>gb|AY103543.1| Zea mays PCO110026 mRNA sequence Length = 1623 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 129 agatctttgtgaagaccctcaccggcaagactatcaccctcgaggt 174 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| || |||||||||||||| |||||||| Sbjct: 585 agatctttgtgaaaacccttactggcaagaccatcactcttgaggt 630 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||| | || ||||||||||| ||||| |||||||| Sbjct: 1041 agatctttgtgaagaccttgactggcaagaccataaccctggaggttga 1089 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| |||||| | || |||||||| |||||||||||||| Sbjct: 357 agatctttgtcaagaccttgactggcaagacaatcacccttgaggt 402 Score = 42.1 bits (21), Expect = 0.10 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||| | || ||||||||||||||| | |||||||| Sbjct: 813 agatcttcgtgaagacattgactggcaagaccatcaccttggaggttga 861
>gb|U29162.1|ZMU29162 Zea mays clone MubG9 ubiquitin gene, complete cds Length = 2913 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1229 agatctttgtgaagaccctcaccggcaagactatcaccctcgaggt 1274 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| || |||||||||||||| |||||||| Sbjct: 1685 agatctttgtgaaaacccttactggcaagaccatcactcttgaggt 1730 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||| | || ||||||||||| ||||| |||||||| Sbjct: 2141 agatctttgtgaagaccttgactggcaagaccataaccctggaggttga 2189 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| |||||| | || |||||||| |||||||||||||| Sbjct: 1457 agatctttgtcaagaccttgactggcaagacaatcacccttgaggt 1502 Score = 42.1 bits (21), Expect = 0.10 Identities = 42/49 (85%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||| | || ||||||||||||||| | |||||||| Sbjct: 1913 agatcttcgtgaagacattgactggcaagaccatcaccttggaggttga 1961
>gb|L41658.1|SCFPOLY Saccharum hybrid (clone SCUBI561) polyubiquitin mRNA, complete cds Length = 1187 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 75 agatctttgtgaagaccctcaccggcaagactatcaccctcgaggt 120 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 303 agatctttgtgaagacccttactggcaagacgatcacccttgaggt 348 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || |||||||| |||||||||||||| Sbjct: 531 agatcttcgtgaagacccttactggcaagacgatcacccttgaggt 576 Score = 50.1 bits (25), Expect = 4e-04 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||| | || ||||||||||| || || |||||||| Sbjct: 759 agatctttgtgaagaccttgactggcaagaccataacactggaggttga 807
>gb|AC005253.1|AC005253 Homo sapiens chromosome 19, cosmid R26445, complete sequence Length = 39760 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 27569 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 27614
>gb|BC101830.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1, transcript variant 1, mRNA (cDNA clone MGC:126879 IMAGE:8069336), complete cds Length = 506 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 63 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 108
>gb|BC101832.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1, transcript variant 1, mRNA (cDNA clone MGC:126881 IMAGE:8069338), complete cds Length = 506 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 63 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 108
>gb|U72496.1|SSU72496 Sus scrofa ubiquitin/ribosomal fusion protein mRNA, complete cds Length = 524 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 40 agatctttgtgaagaccctgacgggcaagaccatcacccttgaggt 85
>emb|X56999.1|HSUBA52P Human UbA52 placental mRNA for ubiquitin-52 amino acid fusion protein Length = 501 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 23 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 68
>emb|X56998.1|HSUBA52A Human UbA52 adrenal mRNA for ubiquitin-52 amino acid fusion protein Length = 495 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 14 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 59
>emb|X56997.1|HSUBA52G Human UbA52 gene coding for ubiquitin-52 amino acid fusion protein Length = 4555 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 2375 agatctttgtgaagaccctcactggcaaaaccatcacccttgaggt 2420
>gb|M62405.1|HUMUBA52A Human ubiquitin/52 residue ribosomal protein fusion gene, complete sequence Length = 948 Score = 75.8 bits (38), Expect = 7e-12 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 361 agatctttgtgaagaccctcacaggcaagaccatcaccctcgaggt 406
>ref|XM_506723.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.28 mRNA Length = 1642 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 999 agatctttgtcaagaccctcacaggcaagaccatcaccctggaggttga 1047 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 543 agatctttgtcaagacactgaccggcaagaccatcaccctcgaggt 588 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 315 agatctttgtcaagactctgaccggcaagactatcacccttgaggt 360 Score = 56.0 bits (28), Expect = 7e-06 Identities = 40/44 (90%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 773 atcttcgtgaagactctgaccggcaagaccatcaccctcgaggt 816 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 87 agatctttgtgaagacattgaccggcaagactatcaccctcgaggt 132
>ref|XM_464194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1640 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 996 agatctttgtcaagaccctcacaggcaagaccatcaccctggaggttga 1044 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 540 agatctttgtcaagacactgaccggcaagaccatcaccctcgaggt 585 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 312 agatctttgtcaagactctgaccggcaagactatcacccttgaggt 357 Score = 56.0 bits (28), Expect = 7e-06 Identities = 40/44 (90%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 770 atcttcgtgaagactctgaccggcaagaccatcaccctcgaggt 813 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 84 agatctttgtgaagacattgaccggcaagactatcaccctcgaggt 129
>ref|XM_415847.1| PREDICTED: Gallus gallus similar to polyubiquitin (LOC417602), mRNA Length = 1413 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 423 agatctttgtgaagaccctgactggcaagaccatcaccctcgaggttga 471 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 195 agatctttgtgaagaccctgactggcaagaccatcaccctcgaggttga 243 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || ||||||||||||||||| |||||||| Sbjct: 879 agatcttcgtgaagaccctgactggcaagaccatcaccctcgaggttga 927 Score = 50.1 bits (25), Expect = 4e-04 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||| ||| | || ||||||||||||||||| |||||||| Sbjct: 651 agatcttcgtgaaaaccttgactggcaagaccatcaccctcgaggttga 699
>gb|AF517839.1| Triticum aestivum ubiquitin protein mRNA, partial cds Length = 204 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||| ||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 5 agatttttgtaaagaccctcaccggcaagaccatcaccctggaggttga 53
>gb|AY478418.1| Clusia minor polyubiquitin (Ubq1) mRNA, partial cds Length = 750 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 319 agatctttgtgaagacccttactggaaagaccatcacccttgaggttga 367 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 |||||||||| ||||||||||| |||||||| |||||| Sbjct: 91 agatctttgttaagaccctcactggcaagactatcacc 128
>gb|AC023818.5| Homo sapiens chromosome 16 clone CTD-2600H12, complete sequence Length = 173304 Score = 73.8 bits (37), Expect = 3e-11 Identities = 43/45 (95%) Strand = Plus / Plus Query: 2 gatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 94702 gatctttgtgaagaccctcacaggccagaccatcacccttgaggt 94746
>gb|AF361365.1| Oncorhynchus mykiss polyubiquitin mRNA, complete cds Length = 1162 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 517 agatcttcgtgaagacccttaccggcaagaccatcaccctggaggttga 565 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 289 agatcttcgtgaagacccttaccggcaagaccatcaccctggaggttga 337 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 745 agatcttcgtgaagacccttaccggcaagaccatcaccctggaggt 790 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 61 agatctttgtgaagacacttaccggcaagaccatcaccctggaggt 106
>gb|DQ103694.1| Ictalurus punctatus polyubiquitin mRNA, partial cds Length = 576 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 29 agatcttcgtgaaaaccctgaccggcaagaccatcacccttgaggttga 77
>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160001 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||| ||||||||||||||| | |||||||| Sbjct: 27935 agatctttgtgaagaccctcactggcaagaccatcaccttggaggttga 27983 Score = 67.9 bits (34), Expect = 2e-09 Identities = 37/38 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 |||||||||||||||||||||| ||||||||||||||| Sbjct: 27707 agatctttgtgaagaccctcactggcaagaccatcacc 27744 Score = 65.9 bits (33), Expect = 7e-09 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcac 37 |||||||||||||||||||||| |||||||||||||| Sbjct: 31914 agatctttgtgaagaccctcactggcaagaccatcac 31950 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 |||||||||| ||||||||||| ||||||||||||||| Sbjct: 32142 agatctttgttaagaccctcactggcaagaccatcacc 32179 Score = 56.0 bits (28), Expect = 7e-06 Identities = 34/36 (94%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacc 38 ||||| |||||||||||||| ||||||||||||||| Sbjct: 27481 atcttcgtgaagaccctcactggcaagaccatcacc 27516 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 33054 agatcttcgttaagaccctcactggcaagaccatcacc 33091 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 32598 agatcttcgttaagaccctcactggcaagaccatcacc 32635 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 32370 agatcttcgttaagaccctcactggcaagaccatcacc 32407 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 27251 agatcttcgttaagaccctcactggcaagaccatcacc 27288 Score = 50.1 bits (25), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcac 37 ||||||| || ||||||||||| |||||||||||||| Sbjct: 32826 agatcttcgttaagaccctcactggcaagaccatcac 32862 Score = 44.1 bits (22), Expect = 0.026 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcac 37 ||||||||||| |||||||||||||| Sbjct: 31697 aagaccctcactggcaagaccatcac 31722 Score = 36.2 bits (18), Expect = 6.4 Identities = 24/26 (92%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcac 37 ||||| || ||||||||||||||||| Sbjct: 29563 aagactctgaccggcaagaccatcac 29588
>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 189976 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||| ||||||||||||||| | |||||||| Sbjct: 58298 agatctttgtgaagaccctcactggcaagaccatcaccttggaggttga 58250 Score = 67.9 bits (34), Expect = 2e-09 Identities = 37/38 (97%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 |||||||||||||||||||||| ||||||||||||||| Sbjct: 58526 agatctttgtgaagaccctcactggcaagaccatcacc 58489 Score = 65.9 bits (33), Expect = 7e-09 Identities = 36/37 (97%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcac 37 |||||||||||||||||||||| |||||||||||||| Sbjct: 54319 agatctttgtgaagaccctcactggcaagaccatcac 54283 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 |||||||||| ||||||||||| ||||||||||||||| Sbjct: 54091 agatctttgttaagaccctcactggcaagaccatcacc 54054 Score = 56.0 bits (28), Expect = 7e-06 Identities = 34/36 (94%) Strand = Plus / Minus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacc 38 ||||| |||||||||||||| ||||||||||||||| Sbjct: 58752 atcttcgtgaagaccctcactggcaagaccatcacc 58717 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 58982 agatcttcgttaagaccctcactggcaagaccatcacc 58945 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 53863 agatcttcgttaagaccctcactggcaagaccatcacc 53826 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 53635 agatcttcgttaagaccctcactggcaagaccatcacc 53598 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 53179 agatcttcgttaagaccctcactggcaagaccatcacc 53142 Score = 50.1 bits (25), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcac 37 ||||||| || ||||||||||| |||||||||||||| Sbjct: 53407 agatcttcgttaagaccctcactggcaagaccatcac 53371 Score = 44.1 bits (22), Expect = 0.026 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 aagaccctcaccggcaagaccatcac 37 ||||||||||| |||||||||||||| Sbjct: 54536 aagaccctcactggcaagaccatcac 54511 Score = 36.2 bits (18), Expect = 6.4 Identities = 24/26 (92%) Strand = Plus / Minus Query: 12 aagaccctcaccggcaagaccatcac 37 ||||| || ||||||||||||||||| Sbjct: 56670 aagactctgaccggcaagaccatcac 56645
>ref|NM_132078.1| Drosophila melanogaster CG11700-RA (CG11700), mRNA Length = 1058 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||| ||||||||||||||| | |||||||| Sbjct: 841 agatctttgtgaagaccctcactggcaagaccatcaccttggaggttga 889 Score = 67.9 bits (34), Expect = 2e-09 Identities = 37/38 (97%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 |||||||||||||||||||||| ||||||||||||||| Sbjct: 613 agatctttgtgaagaccctcactggcaagaccatcacc 650 Score = 56.0 bits (28), Expect = 7e-06 Identities = 34/36 (94%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacc 38 ||||| |||||||||||||| ||||||||||||||| Sbjct: 387 atcttcgtgaagaccctcactggcaagaccatcacc 422 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 157 agatcttcgttaagaccctcactggcaagaccatcacc 194
>gb|DQ363465.1| Ictalurus punctatus clone C153BB02 ubiquitin C mRNA, partial cds Length = 579 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 350 agatcttcgtgaaaaccctgaccggcaagaccatcacccttgaggttga 398 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 122 agatcttcgtgaaaaccctgaccggcaagaccatcacccttgaggttga 170
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 3341099 agatctttgtcaagaccctcacaggcaagaccatcaccctggaggttga 3341051 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 3341783 agatctttgtcaagactctgaccggcaagactatcacccttgaggt 3341738 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 3341555 agatctttgtcaagacactgaccggcaagaccatcaccctcgaggt 3341510 Score = 56.0 bits (28), Expect = 7e-06 Identities = 40/44 (90%) Strand = Plus / Minus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 3341325 atcttcgtgaagactctgaccggcaagaccatcaccctcgaggt 3341282 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 3342011 agatctttgtgaagacattgaccggcaagactatcaccctcgaggt 3341966
>gb|AY737055.1| Oreochromis mossambicus clone Contig17 ubiquitin mRNA, partial cds Length = 547 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 72 agatctttgtgaaaaccctcactggcaagaccatcaccctggaggttga 120 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 300 agatcttcgtgaaaaccctcactggcaagaccatcaccctggaggttga 348 Score = 36.2 bits (18), Expect = 6.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcac 22 ||||||| |||||||||||||| Sbjct: 525 agatcttcgtgaagaccctcac 546
>gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 3702 agatctttgtcaagaccctcacaggcaagaccatcaccctggaggttga 3750 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 3246 agatctttgtcaagacactgaccggcaagaccatcaccctcgaggt 3291 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 3018 agatctttgtcaagactctgaccggcaagactatcacccttgaggt 3063 Score = 56.0 bits (28), Expect = 7e-06 Identities = 40/44 (90%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 3476 atcttcgtgaagactctgaccggcaagaccatcaccctcgaggt 3519 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 2790 agatctttgtgaagacattgaccggcaagactatcaccctcgaggt 2835
>dbj|D10432.1|RICK37 Oryza sativa mRNA for ubiquitin (K37 gene), partial sequence Length = 413 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||||||||||||||||| |||||| |||||||| Sbjct: 115 agatcttcgtgaagaccctcaccggcaagaccaccaccctggaggttga 163 Score = 58.0 bits (29), Expect = 2e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcac 37 ||||||| |||||||||||||| |||||||||||||| Sbjct: 342 agatcttcgtgaagaccctcactggcaagaccatcac 378
>dbj|AP006454.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1472F02 Length = 55065 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 17364 agatctttgtgaagacactcactggcaagaccatcaccctcgaggttga 17316 Score = 44.1 bits (22), Expect = 0.026 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttg 42 ||||||||||||||||| | || || ||||||||||| |||| Sbjct: 17136 agatctttgtgaagaccttgacaggaaagaccatcactcttg 17095
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 145228 agatctttgtgaagacactcactggcaagaccatcaccctcgaggttga 145180 Score = 44.1 bits (22), Expect = 0.026 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttg 42 ||||||||||||||||| | || || ||||||||||| |||| Sbjct: 145000 agatctttgtgaagaccttgacaggaaagaccatcactcttg 144959
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 89959 agatctttgtcaagaccctcacaggcaagaccatcaccctggaggttga 89911 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 90643 agatctttgtcaagactctgaccggcaagactatcacccttgaggt 90598 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 90415 agatctttgtcaagacactgaccggcaagaccatcaccctcgaggt 90370 Score = 56.0 bits (28), Expect = 7e-06 Identities = 40/44 (90%) Strand = Plus / Minus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 90185 atcttcgtgaagactctgaccggcaagaccatcaccctcgaggt 90142 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 90871 agatctttgtgaagacattgaccggcaagactatcaccctcgaggt 90826
>emb|X02650.1|GGUBIQ Chicken mRNA for ubiquitin Length = 598 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 245 agatctttgtgaagaccctgactggcaagaccatcaccctcgaggttga 293 Score = 52.0 bits (26), Expect = 1e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 24 ggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||||||| Sbjct: 40 ggcaagaccatcacccttgaggttga 65
>dbj|AK101547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M20, full insert sequence Length = 1642 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 999 agatctttgtcaagaccctcacaggcaagaccatcaccctggaggttga 1047 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 543 agatctttgtcaagacactgaccggcaagaccatcaccctcgaggt 588 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 315 agatctttgtcaagactctgaccggcaagactatcacccttgaggt 360 Score = 56.0 bits (28), Expect = 7e-06 Identities = 40/44 (90%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 773 atcttcgtgaagactctgaccggcaagaccatcaccctcgaggt 816 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 87 agatctttgtgaagacattgaccggcaagactatcaccctcgaggt 132
>dbj|AK061956.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F08, full insert sequence Length = 1640 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 996 agatctttgtcaagaccctcacaggcaagaccatcaccctggaggttga 1044 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 540 agatctttgtcaagacactgaccggcaagaccatcaccctcgaggt 585 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct: 312 agatctttgtcaagactctgaccggcaagactatcacccttgaggt 357 Score = 56.0 bits (28), Expect = 7e-06 Identities = 40/44 (90%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 770 atcttcgtgaagactctgaccggcaagaccatcaccctcgaggt 813 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| | ||||||||||| |||||||| ||||| Sbjct: 84 agatctttgtgaagacattgaccggcaagactatcaccctcgaggt 129
>dbj|AK058319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A10, full insert sequence Length = 1421 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||||||||||||||||||||| | |||||| Sbjct: 756 agatcttcgtgaagaccctcaccggcaagaccatcaccctgggggttga 804 Score = 65.9 bits (33), Expect = 7e-09 Identities = 45/49 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||||||||| |||||||||||||| || |||||||| Sbjct: 984 agatcttcgtgaagaccctcactggcaagaccatcactctggaggttga 1032 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 308 gtgaagaccctcaccggcaagaccattaccctggaggt 345 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||| ||||||||||||||| | |||||||| Sbjct: 83 aagaccctcactggcaagaccatcaccttggaggttga 120
>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete sequence Length = 305376 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||| ||||||||||||||| | |||||||| Sbjct: 48157 agatctttgtgaagaccctcactggcaagaccatcaccttggaggttga 48109 Score = 67.9 bits (34), Expect = 2e-09 Identities = 37/38 (97%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 |||||||||||||||||||||| ||||||||||||||| Sbjct: 48385 agatctttgtgaagaccctcactggcaagaccatcacc 48348 Score = 65.9 bits (33), Expect = 7e-09 Identities = 36/37 (97%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcac 37 |||||||||||||||||||||| |||||||||||||| Sbjct: 44178 agatctttgtgaagaccctcactggcaagaccatcac 44142 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 |||||||||| ||||||||||| ||||||||||||||| Sbjct: 43950 agatctttgttaagaccctcactggcaagaccatcacc 43913 Score = 56.0 bits (28), Expect = 7e-06 Identities = 34/36 (94%) Strand = Plus / Minus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacc 38 ||||| |||||||||||||| ||||||||||||||| Sbjct: 48611 atcttcgtgaagaccctcactggcaagaccatcacc 48576 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 48841 agatcttcgttaagaccctcactggcaagaccatcacc 48804 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 43722 agatcttcgttaagaccctcactggcaagaccatcacc 43685 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 43494 agatcttcgttaagaccctcactggcaagaccatcacc 43457 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 43038 agatcttcgttaagaccctcactggcaagaccatcacc 43001 Score = 50.1 bits (25), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcac 37 ||||||| || ||||||||||| |||||||||||||| Sbjct: 43266 agatcttcgttaagaccctcactggcaagaccatcac 43230 Score = 44.1 bits (22), Expect = 0.026 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 aagaccctcaccggcaagaccatcac 37 ||||||||||| |||||||||||||| Sbjct: 44395 aagaccctcactggcaagaccatcac 44370 Score = 36.2 bits (18), Expect = 6.4 Identities = 24/26 (92%) Strand = Plus / Minus Query: 12 aagaccctcaccggcaagaccatcac 37 ||||| || ||||||||||||||||| Sbjct: 46529 aagactctgaccggcaagaccatcac 46504
>dbj|D63782.1|CRUPUQ Cricetulus sp. gene for polyubiquitin, complete cds Length = 8730 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 7886 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggttga 7934 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 6746 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggttga 6794 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 6974 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 7019 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 6518 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 6563 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 6062 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 6107 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| || ||||||||||||||||| ||||| Sbjct: 7430 agatctttgtgaaaaccctgacaggcaagaccatcaccctggaggt 7475 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 7202 agatctttgtaaagaccctgacaggcaagaccatcaccctggaggt 7247 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 7658 agatctttgtaaagaccctgacaggcaagaccataaccctggaggt 7703 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 6290 agatctttgtgaagaccctgacagggaaaaccatcaccctggaggt 6335
>gb|AF093504.1|AF093504 Saccharum hybrid cultivar H32-8560 tetra-ubiquitin (ubi4) gene, complete cds Length = 5551 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || ||||||||||| |||||||||||||||||||||||||| Sbjct: 1807 agatcttcgttaagaccctcactggcaagaccatcacccttgaggttga 1855 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 2491 agatcttcgtcaagaccctcaccggcaagaccatcaccctggaggt 2536 Score = 48.1 bits (24), Expect = 0.002 Identities = 39/44 (88%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| || ||||||||||| |||||||| ||||| |||||||| Sbjct: 2037 atcttcgtcaagaccctcactggcaagactatcacgcttgaggt 2080 Score = 38.2 bits (19), Expect = 1.6 Identities = 33/38 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 |||| ||||| |||||| | || ||||||||||||||| Sbjct: 2263 agatttttgtcaagaccttnactggcaagaccatcacc 2300
>dbj|AB003732.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 3273 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 3022 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggttga 3070 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2566 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2611 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2338 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2383 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2110 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2155 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1882 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1927 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1426 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1471 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1198 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1243 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 970 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1015 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 742 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 787 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 514 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 559 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 286 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 331 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 2794 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 2839 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 1654 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 1699 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 58 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 103
>dbj|AB003731.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 2817 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 2566 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggttga 2614 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2338 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2383 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2110 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2155 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1654 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1699 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1426 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1471 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1198 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1243 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 970 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1015 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 742 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 787 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 514 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 559 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 1882 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 1927 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 286 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 331 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 58 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 103
>gb|AC152972.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0048I04, complete sequence Length = 35440 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct: 16449 agatctttgtgaagactctcactggcaagaccataacccttgaggttga 16497 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || ||||||||||| || ||||||||||| Sbjct: 16905 agatcttcgtgaagacccttactggcaagaccattacgcttgaggttga 16953 Score = 54.0 bits (27), Expect = 3e-05 Identities = 42/47 (89%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 |||||||| |||||| | || |||||||| ||||||||||||||||| Sbjct: 16679 atctttgtcaagaccttgactggcaagactatcacccttgaggttga 16725
>gb|M11100.1|CHKUBHSP Chicken ubiquitin mRNA, from heat shocked embryo cells Length = 622 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 245 agatctttgtgaagaccctgactggcaagaccatcaccctcgaggttga 293 Score = 52.0 bits (26), Expect = 1e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 24 ggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||||||| Sbjct: 40 ggcaagaccatcacccttgaggttga 65
>gb|M14693.1|CHKUB1A Chicken ubiquitin I (UbI) gene, partial cds Length = 2207 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 1793 agatctttgtgaagaccctgactggcaagaccatcaccctcgaggttga 1841 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||| | || |||||||||||||||||||||||||| Sbjct: 1337 agatctttgtgaagaccttgactggcaagaccatcacccttgaggttga 1385 Score = 73.8 bits (37), Expect = 3e-11 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 1109 agatcttcgtgaagaccctgactggcaagaccatcacccttgaggttga 1157 Score = 52.0 bits (26), Expect = 1e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 24 ggcaagaccatcacccttgaggttga 49 |||||||||||||||||||||||||| Sbjct: 1588 ggcaagaccatcacccttgaggttga 1613
>emb|AJ007936.1|GPU7936 Gibberella pulicaris ubi1 gene Length = 2927 Score = 71.9 bits (36), Expect = 1e-10 Identities = 42/44 (95%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 1686 atcttcgtcaagaccctcaccggcaagaccatcacccttgaggt 1729 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 1912 agatcttcgtcaagaccctcaccggcaagaccattacccttgaggt 1957 Score = 46.1 bits (23), Expect = 0.007 Identities = 32/35 (91%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggt 46 |||||||| || ||||||||||| ||||||||||| Sbjct: 2433 aagacccttactggcaagaccattacccttgaggt 2467 Score = 46.1 bits (23), Expect = 0.007 Identities = 32/35 (91%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggt 46 |||||||| || ||||||||||| ||||||||||| Sbjct: 2151 aagacccttactggcaagaccattacccttgaggt 2185
>dbj|AB089614.1| Pan troglodytes UbC gene for polyubiquitin C, complete cds Length = 2286 Score = 71.9 bits (36), Expect = 1e-10 Identities = 42/44 (95%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 1831 atctttgtgaagacactcactggcaagaccatcacccttgaggt 1874 Score = 63.9 bits (32), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 1147 atcttcgtgaagacactcactggcaagaccatcacccttgaggt 1190 Score = 63.9 bits (32), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 691 atcttcgtgaagacactcactggcaagaccatcacccttgaggt 734 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 233 agatcttcgtgaagacactcactggcaaaaccatcacccttgaggt 278 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| ||||||||||| || || |||||||||||||| |||||||| Sbjct: 461 agatcttcgtgaagaccctgactggtaagaccatcaccctcgaggttga 509 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || || |||||||||||||| ||||| Sbjct: 1601 agatcttcgtgaagaccctgactggtaagaccatcaccctcgaggt 1646 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || || |||||||||||||| ||||| Sbjct: 1373 agatcttcgtgaagaccctgactggtaagaccatcaccctcgaggt 1418 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || || |||||||||||||| ||||| Sbjct: 917 agatcttcgtgaagaccctgactggtaagaccatcaccctcgaggt 962 Score = 50.1 bits (25), Expect = 4e-04 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| |||||||| || || || |||||||||||||| |||||||| Sbjct: 5 agatcttcgtgaagactctgactggtaagaccatcaccctcgaggttga 53 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || || ||||||||||| || ||||| Sbjct: 2057 agatcttcgtgaagaccctgactggtaagaccatcactctcgaggt 2102
>dbj|AB098957.1| Bos taurus mRNA for similar to ubiquitin/ribosomal fusion protein, partial cds, clone: ORCS10973 Length = 502 Score = 71.9 bits (36), Expect = 1e-10 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgag 44 ||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 17 agatctttgtgaagaccctgacgggcaagaccatcacccttgag 60
>gb|AC099535.2| Homo sapiens chromosome 3 clone RP11-2G22, complete sequence Length = 181720 Score = 69.9 bits (35), Expect = 5e-10 Identities = 41/43 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttga 43 |||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 153183 agatctttgtgaagaccctcacgggcaagaccatcactcttga 153225
>emb|AJ223328.1|NTAJ3328 Nicotiana tabacum TUQG2 gene, complete CDS Length = 2074 Score = 69.9 bits (35), Expect = 5e-10 Identities = 44/47 (93%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 637 atcttcgtcaagaccctcaccggcaagaccatcaccctcgaggttga 683 Score = 61.9 bits (31), Expect = 1e-07 Identities = 34/35 (97%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||||||| |||||||| Sbjct: 929 aagaccctcaccggcaagaccatcactcttgaggt 963 Score = 42.1 bits (21), Expect = 0.10 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcac 37 ||||||| || |||||||| || |||||||||||||| Sbjct: 1146 agatcttcgtcaagacccttactggcaagaccatcac 1182
>gb|AC137675.2| Homo sapiens chromosome 3 clone RP11-358O21, complete sequence Length = 163004 Score = 69.9 bits (35), Expect = 5e-10 Identities = 41/43 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttga 43 |||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 72689 agatctttgtgaagaccctcacgggcaagaccatcactcttga 72731
>ref|NM_018955.2| Homo sapiens ubiquitin B (UBB), mRNA Length = 971 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 143 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 188 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 371 agatcttcgtgaagaccctgaccggcaagaccatcaccct 410 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 599 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 644
>ref|XM_514202.1| PREDICTED: Pan troglodytes similar to ubiquitin B precursor; polyubiquitin B (LOC457741), mRNA Length = 572 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 121 agatcttcgtgaagaccctgactggcaagaccatcacccttgaggt 166
>gb|BC038999.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:47606 IMAGE:4943285), complete cds Length = 957 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 112 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 157 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 340 agatcttcgtgaagaccctgaccggcaagaccatcaccct 379 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 568 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 613
>gb|BT020104.1| Homo sapiens ubiquitin B mRNA, complete cds Length = 690 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 5 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 50 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 233 agatcttcgtgaagaccctgaccggcaagaccatcaccct 272 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 461 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 506
>gb|BT016652.1| Zea mays clone Contig485 mRNA sequence Length = 1253 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 316 agatctttgtgaagacactcactggcaagacaatcacccttgaggt 361 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || |||||||| |||||||| ||||| Sbjct: 88 agatcttcgtgaagaccctgactggcaagactatcaccctcgaggt 133 Score = 50.1 bits (25), Expect = 4e-04 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||||||||||| || || || ||||| ||||| |||||||| Sbjct: 772 agatctttgtgaagaccctgactggaaaaaccataaccctggaggttga 820 Score = 36.2 bits (18), Expect = 6.4 Identities = 33/38 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 |||| ||||||||||| | || ||||||||||||||| Sbjct: 544 agatttttgtgaagacattgactggcaagaccatcacc 581
>gb|BC066197.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:76690 IMAGE:6435236), complete cds Length = 1214 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 361 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 406 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 133 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 178 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 817 agatcttcgtgaagaccctgaccggcaagaccatcacc 854 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 589 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 634
>gb|AC123736.8| Mus musculus chromosome 3, clone RP23-478I18, complete sequence Length = 189063 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 173482 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 173527
>ref|XM_323905.1| Neurospora crassa OR74A hypothetical protein ( ubiquitin - chicken ) (NCU04553.1) partial mRNA Length = 285 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 5 agatcttcgtgaagaccctcacgggcaagactatcacccttgaggt 50
>gb|BC070919.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:91487 IMAGE:7104905), complete cds Length = 1170 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 761 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 806 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 533 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 578 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 305 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 350 Score = 63.9 bits (32), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 79 atcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 122
>gb|BC060312.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:72686 IMAGE:6919609), complete cds Length = 1199 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 791 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 836 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 563 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 608 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 335 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 380 Score = 63.9 bits (32), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 109 atcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 152
>gb|BC046123.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:57581 IMAGE:3879581), complete cds Length = 951 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 91 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 136 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 319 agatcttcgtgaagaccctgaccggcaagaccatcaccct 358 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 547 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 592
>ref|XM_950851.1| Neurospora crassa OR74A hypothetical protein ( ubiquitin - chicken ) (NCU04553.1) partial mRNA Length = 285 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 5 agatcttcgtgaagaccctcacgggcaagactatcacccttgaggt 50
>gb|BC019850.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:29922 IMAGE:5123849), complete cds Length = 1146 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 756 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 801 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 300 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 345 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 72 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 117 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 528 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 573
>gb|BC031027.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:32826 IMAGE:4715377), complete cds Length = 919 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 103 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 148 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 331 agatcttcgtgaagaccctgaccggcaagaccatcaccct 370 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 559 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 604
>gb|BC000379.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:8385 IMAGE:2820408), complete cds Length = 989 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 143 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 188 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 371 agatcttcgtgaagaccctgaccggcaagaccatcaccct 410 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 599 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 644
>gb|BC026301.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:24729 IMAGE:4280629), complete cds Length = 957 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 101 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 146 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 329 agatcttcgtgaagaccctgaccggcaagaccatcaccct 368 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 557 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 602
>ref|XM_878679.1| PREDICTED: Bos taurus similar to ribosomal protein S27a, transcript variant 1 (LOC615199), mRNA Length = 747 Score = 67.9 bits (34), Expect = 2e-09 Identities = 40/42 (95%) Strand = Plus / Plus Query: 5 ctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1 ctttgtgaagaccctgacgggcaagaccatcacccttgaggt 42
>ref|NM_011664.2| Mus musculus ubiquitin B (Ubb), mRNA Length = 1167 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 332 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 377 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 104 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 149 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 788 agatcttcgtgaagaccctgaccggcaagaccatcacc 825 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 560 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 605
>gb|AF285162.1| Mus musculus cell-line C3H/RV polyubiquitin C (Ubc) gene, complete cds Length = 4212 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 3755 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 3800 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 3299 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 3344 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 3071 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 3116 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2615 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2660 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2159 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2204 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1931 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1976 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1703 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1748 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||||||||||||||| || ||||||||||||||| Sbjct: 3983 agatctttgtgaagaccctgacaggcaagaccatcacc 4020 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 3527 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 3572 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| || ||||||||||||||||| ||||| Sbjct: 2843 agatctttgtgaaaaccctgacaggcaagaccatcaccctggaggt 2888 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| || ||||||||||||||||| ||||| Sbjct: 2387 agatctttgtgaaaaccctgacaggcaagaccatcaccctggaggt 2432 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 1475 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 1520
>gb|AF285161.1| Mus musculus cell-line C3H/He polyubiquitin C (Ubc) gene, complete cds Length = 3756 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 3299 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 3344 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 3071 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 3116 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2843 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2888 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2615 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2660 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2159 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2204 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1931 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1976 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1703 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1748 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||||||||||||||| || ||||||||||||||| Sbjct: 3527 agatctttgtgaagaccctgacaggcaagaccatcacc 3564 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| || ||||||||||||||||| ||||| Sbjct: 2387 agatctttgtgaaaaccctgacaggcaagaccatcaccctggaggt 2432 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 1475 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 1520
>ref|XR_004580.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 746 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 336 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 381 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 108 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 153
>ref|XR_004579.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 977 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 338 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 383 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 110 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 155 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 566 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 611
>ref|XR_001605.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 379 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 108 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 153 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 336 agatcttcgtgaagaccctgaccggcaagaccatcaccct 375
>ref|XM_973010.1| PREDICTED: Mus musculus ubiquitin C (Ubc), mRNA Length = 2310 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1923 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1968 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1467 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1512 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1239 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1284 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1011 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1056 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 783 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 828 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 555 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 600 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||||||||||||||| || ||||||||||||||||| Sbjct: 2151 agatctttgtgaagaccctgacaggcaagaccatcaccct 2190 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 1695 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 1740 Score = 40.1 bits (20), Expect = 0.41 Identities = 35/40 (87%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||||||||| ||| | || || |||||||||||||| Sbjct: 326 agatctttgtgaaaaccttaactggtaagaccatcaccct 365
>ref|XM_001001919.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 3 (Ubc), mRNA Length = 794 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 554 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 599 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 326 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 371
>ref|XM_001001949.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 8 (Ubc), mRNA Length = 1354 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 886 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 931 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||||||||||||||| || ||||||||||||||| Sbjct: 1114 agatctttgtgaagaccctgacaggcaagaccatcacc 1151 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 658 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 703
>ref|XM_001001988.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 4 (Ubc), mRNA Length = 1250 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 782 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 827 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 554 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 599 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||||||||||||||| || ||||||||||||||| Sbjct: 1010 agatctttgtgaagaccctgacaggcaagaccatcacc 1047 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 326 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 371
>ref|XM_001002029.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 18 (Ubc), mRNA Length = 2266 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1798 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1843 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1570 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1615 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1342 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1387 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1114 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1159 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 886 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 931 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||||||||||||||| || ||||||||||||||| Sbjct: 2026 agatctttgtgaagaccctgacaggcaagaccatcacc 2063 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 658 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 703
>ref|XM_001002019.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 25 (Ubc), mRNA Length = 1676 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1208 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1253 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 980 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1025 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 752 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 797 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 524 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 569 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 296 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 341 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||||||||||||||| || ||||||||||||||| Sbjct: 1436 agatctttgtgaagaccctgacaggcaagaccatcacc 1473 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 68 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 113
>ref|XM_001002053.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 22 (Ubc), mRNA Length = 1931 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1463 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1508 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1235 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1280 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1007 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1052 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 779 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 824 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 551 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 596 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 323 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 368 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||||||||||||||| || ||||||||||||||| Sbjct: 1691 agatctttgtgaagaccctgacaggcaagaccatcacc 1728 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 95 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 140
>ref|XM_001002045.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 29 (Ubc), mRNA Length = 2494 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2026 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2071 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1798 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1843 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1570 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1615 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1342 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1387 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1114 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1159 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 886 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 931 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||||||||||||||| || ||||||||||||||| Sbjct: 2254 agatctttgtgaagaccctgacaggcaagaccatcacc 2291 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 658 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 703
>ref|XM_974638.1| PREDICTED: Mus musculus similar to polyubiquitin (LOC669363), mRNA Length = 494 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 104 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 149
>ref|XM_992219.1| PREDICTED: Mus musculus similar to polyubiquitin (LOC667759), mRNA Length = 493 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 104 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 149
>ref|XR_005158.1| PREDICTED: Mus musculus ubiquitin pseudogene (LOC218963), misc RNA Length = 493 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 104 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 149
>gb|BC008661.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:3598724), complete cds Length = 777 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 305 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 350 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||||||||||||||| || ||||||||||||||||| Sbjct: 533 agatctttgtgaagaccctgacaggcaagaccatcaccct 572 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 77 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 122
>gb|BC025894.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:5055216), complete cds Length = 1213 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 742 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 787 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 286 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 331 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||||||||||||||| || ||||||||||||||||| Sbjct: 970 agatctttgtgaagaccctgacaggcaagaccatcaccct 1009 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 514 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 559 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 58 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 103
>gb|BC036303.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:2645223), complete cds Length = 1193 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 494 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 539 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 266 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 311 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||||||||||||||| || ||||||||||||||| Sbjct: 950 agatctttgtgaagaccctgacaggcaagaccatcacc 987 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || |||||||| |||||||| ||||| Sbjct: 722 agatctttgtgaagaccctgacaggcaagactatcaccctggaggt 767 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 38 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 83
>ref|XM_858590.1| PREDICTED: Canis familiaris similar to ubiquitin B precursor, transcript variant 3 (LOC479513), mRNA Length = 743 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 332 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 377 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 104 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 149
>ref|XM_536651.2| PREDICTED: Canis familiaris similar to ubiquitin B precursor, transcript variant 1 (LOC479513), mRNA Length = 881 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 470 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 515 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 242 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 287 Score = 58.0 bits (29), Expect = 2e-06 Identities = 41/45 (91%) Strand = Plus / Plus Query: 2 gatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 15 gatcttcgtgaaaaccctaaccggcaagaccatcaccctggaggt 59
>ref|XM_858547.1| PREDICTED: Canis familiaris similar to ubiquitin B precursor, transcript variant 2 (LOC479513), mRNA Length = 707 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 318 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 363 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 234 agatcttcgtgaagaccctgaccggcaagaccatcaccct 273 Score = 58.0 bits (29), Expect = 2e-06 Identities = 41/45 (91%) Strand = Plus / Plus Query: 2 gatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 7 gatcttcgtgaaaaccctaaccggcaagaccatcaccctggaggt 51
>gb|BC021837.1| Mus musculus ubiquitin C, mRNA (cDNA clone MGC:30231 IMAGE:5123918), complete cds Length = 2120 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1649 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1694 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1193 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1238 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 965 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1010 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 737 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 782 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 509 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 554 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 281 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 326 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||||||||||||||| || ||||||||||||||||| Sbjct: 1877 agatctttgtgaagaccctgacaggcaagaccatcaccct 1916 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 1421 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 1466 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 53 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 98
>gb|BC006680.1| Mus musculus ubiquitin C, mRNA (cDNA clone MGC:7811 IMAGE:3500023), complete cds Length = 1891 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1194 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1239 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 966 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1011 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 738 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 783 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 510 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 555 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 282 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 327 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||||||||||||||| || ||||||||||||||||| Sbjct: 1650 agatctttgtgaagaccctgacaggcaagaccatcaccct 1689 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 1422 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 1467 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 54 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 99
>gb|BC062397.1| Rattus norvegicus cDNA clone IMAGE:5623273, **** WARNING: chimeric clone **** Length = 3040 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2562 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2607 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2334 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2379 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2106 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2151 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1878 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1923 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1650 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1695 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1422 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1467 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1194 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1239 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 966 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1011 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 738 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 783 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 510 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 555 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 282 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 327 Score = 58.0 bits (29), Expect = 2e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcac 37 ||||||||||||||||||| || |||||||||||||| Sbjct: 2790 agatctttgtgaagaccctgacaggcaagaccatcac 2826 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 54 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 99
>gb|BC021067.1| Homo sapiens cDNA clone IMAGE:3510175, **** WARNING: chimeric clone **** Length = 4562 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 3716 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 3761 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3944 agatcttcgtgaagaccctgaccggcaagaccatcaccct 3983 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 4172 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 4217
>ref|XM_784685.1| PREDICTED: Strongylocentrotus purpuratus similar to CG2960-PA (LOC584839), mRNA Length = 594 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 11 agatctttgtgaagaccctgacgggcaagactatcacccttgaggt 56
>gb|AC137844.8| Mus musculus, clone RP23-415L22, complete sequence Length = 188189 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 144003 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 143958
>ref|XM_782408.1| PREDICTED: Strongylocentrotus purpuratus similar to polyubiquitin (LOC582459), mRNA Length = 1701 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 92 agatctttgtcaagaccctcaccggcaagaccatcacactcgaggt 137 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || || |||||||| |||||||||||||| || ||||| Sbjct: 776 agatcttcgtcaaaaccctcacaggcaagaccatcacactcgaggt 821 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || || |||||||| |||||||||||||| || ||||| Sbjct: 548 agatcttcgtcaaaaccctcacaggcaagaccatcacactcgaggt 593 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || || |||||||| |||||||||||||| || ||||| Sbjct: 320 agatcttcgtcaaaaccctcacaggcaagaccatcacactcgaggt 365
>emb|Y17004.1|SDO17004 Suberites domuncula mRNA for monoubiquitin Length = 625 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 34 agatctttgtgaagactctcacagggaagaccatcacccttgaggt 79
>emb|X92661.1|RNUBC5 R.norvegicus mRNA for polyubiquitin 5' end Length = 344 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 277 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 322 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 49 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 94
>emb|X87156.1|APOLYUBIQ Acanthamoeba sp. 4b3 polyubiquitin gene Length = 2388 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 2106 agatcttcgtgaagaccctcaccggtaagaccatcaccctcgaggt 2151 Score = 63.9 bits (32), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 1880 atcttcgtgaagaccctgaccggcaagaccatcaccctcgaggt 1923 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 2334 agatcttcgtcaagacgctgaccggcaagaccatcaccctcgaggt 2379
>emb|X75628.1|ACUBIFUS A.castellanii mRNA for ubiquitin fusion protein Length = 525 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 65 agatcttcgtgaagaccctcaccggtaagaccatcaccctcgaggt 110
>gb|DQ122773.1| Medicago sativa clone MH5 pentameric polyubiquitin mRNA, partial cds Length = 571 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| |||||||||||||||||||||||||| Sbjct: 301 agatcttcgtcaagacccttaccggcaagaccatcacccttgaggt 346 Score = 58.0 bits (29), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||| || ||||||||||| || ||||| ||||||||||||||||| Sbjct: 73 agatcttcgttaagaccctcacagggaagactatcacccttgaggttga 121
>gb|BC100341.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:117670 IMAGE:30787432), complete cds Length = 1145 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 286 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 331 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 58 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 103 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 742 agatcttcgtgaagaccctgaccggcaagaccatcacc 779 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 514 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 559
>emb|AJ697758.1| Eucalyptus globulus subsp. globulus partial mRNA for putative polyubiquitin Length = 228 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 71 agatcttcgtcaagaccctcaccggcaagaccatcaccctcgaggt 116
>emb|AJ271129.1|PAB271129 Picea abies mRNA for putative polyubiquitin, (pPA0031 gene) Length = 1020 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 77 agatctttgtcaagaccctcaccggcaagaccatcactctcgaggt 122
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 122001 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 121956 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 121773 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 121728 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 121545 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 121500 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 121317 agatcttcgtgaagaccctgaccggcaagaccatcacc 121280
>emb|CR620731.1| full-length cDNA clone CS0DF038YI22 of Fetal brain of Homo sapiens (human) Length = 940 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 117 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 162 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 345 agatcttcgtgaagaccctgaccggcaagaccatcaccct 384 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 573 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 618
>emb|CR607481.1| full-length cDNA clone CS0DN001YF11 of Adult brain of Homo sapiens (human) Length = 917 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 91 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 136 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 319 agatcttcgtgaagaccctgaccggcaagaccatcaccct 358 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 547 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 592
>gb|BC114001.1| Bos taurus polyubiquitin, mRNA (cDNA clone MGC:133799 IMAGE:8064312), complete cds Length = 1093 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 480 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 525 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 708 agatcttcgtgaagaccctgaccggcaagaccatcaccct 747 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 24 agatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggt 69 Score = 50.1 bits (25), Expect = 4e-04 Identities = 28/29 (96%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcac 37 ||||||||||| ||||||||||||||||| Sbjct: 260 gtgaagaccctgaccggcaagaccatcac 288
>emb|CR589965.1| full-length cDNA clone CS0DF011YA08 of Fetal brain of Homo sapiens (human) Length = 908 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 83 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 128 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 311 agatcttcgtgaagaccctgaccggcaagaccatcaccct 350 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 539 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 584
>dbj|AK132747.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922505B09 product:ubiquitin B, full insert sequence Length = 1166 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 332 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 377 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 104 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 149 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 788 agatcttcgtgaagaccctgaccggcaagaccatcacc 825 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 560 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 605
>gb|AC093484.2| Homo sapiens chromosome , clone RP11-138I1, complete sequence Length = 170944 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 102701 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 102746 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 102929 agatcttcgtgaagaccctgaccggcaagaccatcaccct 102968 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 103157 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 103202
>dbj|AK165313.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430012C16 product:ubiquitin B, full insert sequence Length = 1159 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 331 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 376 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 104 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 149 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 787 agatcttcgtgaagaccctgaccggcaagaccatcacc 824 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 559 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 604
>dbj|AK160683.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010009A18 product:Similar to polyubiquitin (Fragment) homolog [Bos taurus], full insert sequence Length = 821 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 101 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 146 Score = 60.0 bits (30), Expect = 4e-07 Identities = 39/42 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttg 42 ||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 329 agatcttcgtgaagaccctgacgggcaagaccatcacccttg 370
>gb|AF429430.1|AF429430 Olea europaea polyubiquitin OUB2 mRNA, complete cds Length = 1666 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 314 agatctttgtgaagaccctcaccggaaagactatcaccctggaggt 359 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || || ||||| |||||||||||||||||||||||||| Sbjct: 86 agatcttcgttaaaaccctgaccggcaagaccatcacccttgaggt 131
>dbj|AK168448.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920021C12 product:ubiquitin C, full insert sequence Length = 980 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 523 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 568 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 295 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 340 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||||||||||||||| || ||||||||||||||||| Sbjct: 751 agatctttgtgaagaccctgacaggcaagaccatcaccct 790 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 67 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 112
>gb|AY857485.1| Suberites domuncula S27a-ubiquitin mRNA, complete cds Length = 465 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 5 agatctttgtgaagactctcacagggaagaccatcacccttgaggt 50
>dbj|AB168934.1| Macaca fascicularis testis cDNA, clone: QtsA-15896, similar to human ubiquitin A-52 residue ribosomal protein fusionproduct 1 (UBA52), mRNA, RefSeq: NM_003333.2 Length = 551 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 56 agatctttgtgaagaccctcacgggcaaaaccatcaccctcgaggt 101
>gb|S94464.1| polyubiquitin [maize, Genomic, 3841 nt] Length = 3841 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 2910 agatctttgtgaagacactcactggcaagacaatcacccttgaggt 2955 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 2682 agatcttcgtgaagaccctgaccggcaagactatcaccctcgaggt 2727 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 2454 agatcttcgtgaagaccctgaccggcaagactatcaccctcgaggt 2499 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 2226 agatctttgtgaaaaccctgaccggcaagactatcaccctcgaggt 2271 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| || |||||||| |||||||| ||||| Sbjct: 1998 agatctttgtgaaaaccctgactggcaagactatcaccctcgaggt 2043 Score = 36.2 bits (18), Expect = 6.4 Identities = 33/38 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 |||| ||||||||||| | || ||||||||||||||| Sbjct: 3138 agatttttgtgaagacattgactggcaagaccatcacc 3175
>dbj|AK010964.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510015A11 product:POLYUBIQUITIN (UBIQUITIN B) homolog [Mus musculus], full insert sequence Length = 1208 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 523 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 568 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 295 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 340 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||||||||||||||| || ||||||||||||||||| Sbjct: 979 agatctttgtgaagaccctgacaggcaagaccatcaccct 1018 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 751 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 796 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 67 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 112
>dbj|AK013873.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3000008M07 product:ubiquitin B, full insert sequence Length = 1162 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 102 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 147 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 330 agatcttcgtgaagacccttaccggcaagaccatcaccct 369 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 786 agatcttcgtgaagaccctgaccggcaagaccatcacc 823 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 558 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 603
>dbj|AK010625.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410036G24 product:ubiquitin B, full insert sequence Length = 1160 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 332 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 377 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 104 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 149 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 788 agatcttcgtgaagaccctgaccggcaagaccatcacc 825 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 560 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 605
>dbj|AK010413.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410005G06 product:polyubiquitin 4, full insert sequence Length = 1165 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 333 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 378 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 105 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 150 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 789 agatcttcgtgaagaccctgaccggcaagaccatcacc 826 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 561 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 606
>dbj|AK003190.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001L13 product:ubiquitin B, full insert sequence Length = 932 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 332 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 377 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 104 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 149 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 560 agatcttcgtgaagaccctgaccggcaagaccatcacc 597
>gb|AF395864.1|AF395864 Branchiostoma belcheri ubiquitin mRNA, complete cds Length = 428 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 26 agatcttcgtgaagaccctgacaggcaagaccatcacccttgaggt 71
>dbj|AK088453.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430018A04 product:ubiquitin polyprotein (heat shock related) (fragment) homolog [Gallus gallus], full insert sequence Length = 704 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 333 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 378 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 105 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 150
>dbj|AK013027.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810407D23 product:ubiquitin B, full insert sequence Length = 1167 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 332 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 377 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 104 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 149 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 788 agatcttcgtgaagaccctgaccggcaagaccatcacc 825 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 560 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 605
>dbj|AK012443.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700055N04 product:ubiquitin B, full insert sequence Length = 1166 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 333 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 378 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 105 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 150 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 789 agatcttcgtgaagaccctgaccggcaagaccatcacc 826 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 561 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 606
>dbj|AK012427.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700054O04 product:ubiquitin, beta-galactosidase related, full insert sequence Length = 1903 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1447 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1492 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1217 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1262 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 987 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1032 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 759 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 804 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 531 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 576 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 302 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 347 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 73 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 118 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||||||||||||||| || ||||||||||||||||| Sbjct: 1675 agatctttgtgaagaccctgacaggcaagaccatcaccct 1714
>gb|BC094012.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:5037932), complete cds Length = 1209 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 510 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 555 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 282 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 327 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||||||||||||||| || ||||||||||||||| Sbjct: 966 agatctttgtgaagaccctgacaggcaagaccatcacc 1003 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || |||||||| |||||||| ||||| Sbjct: 738 agatctttgtgaagaccctgacaggcaagactatcaccctggaggt 783 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 54 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 99
>ref|NM_017314.1| Rattus norvegicus ubiquitin C (Ubc), mRNA Length = 2545 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2090 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2135 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1862 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1907 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1634 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1679 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1406 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1451 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1178 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1223 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 950 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 995 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 722 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 767 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 494 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 539 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 266 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 311 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 2318 agatctttgtgaagaccctgacaggcaagaccatcactctggaggt 2363 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 38 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 83
>dbj|AK007273.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700124N12 product:ubiquitin B, full insert sequence Length = 1195 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 363 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 408 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 135 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 180 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| ||||||||||| |||||||||||||||||| Sbjct: 819 agatcttcgtgaagaccctgaccggcaagaccatcacc 856 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 591 agatcttcgtgaagaccctgactggcaagaccatcaccctggaggt 636
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| ||||||||| |||||||||||||||| Sbjct: 5073406 agatctttgtgaaaaccctgaccggcaagtccatcacccttgaggt 5073361 Score = 36.2 bits (18), Expect = 6.4 Identities = 33/38 (86%) Strand = Plus / Minus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||| || ||||||| ||||||||||| ||||| Sbjct: 5088299 gtgaagactctgaccggcatcaccatcaccctcgaggt 5088262
>dbj|AB210852.1| Lemna gibba LgUBQ mRNA for ubiquitin, partial cds Length = 216 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 3 agatcttcgtgaagaccctgaccggcaagaccatcacacttgaggt 48
>ref|NM_174133.2| Bos taurus polyubiquitin (LOC281370), mRNA Length = 1144 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 547 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 592 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 775 agatcttcgtgaagaccctgaccggcaagaccatcaccct 814 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 91 agatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggt 136 Score = 56.0 bits (28), Expect = 7e-06 Identities = 31/32 (96%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcaccct 40 ||||||||||| |||||||||||||||||||| Sbjct: 327 gtgaagaccctgaccggcaagaccatcaccct 358
>ref|NM_001009117.1| Pan troglodytes ubiquitin B (UBB), mRNA Length = 690 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 5 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 50 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 461 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 506 Score = 56.0 bits (28), Expect = 7e-06 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| || ||||||||||||||||| Sbjct: 233 agatcttcgtgaagaccctgactggcaagaccatcaccct 272
>gb|AF154647.1| Nicotiana tabacum clone PR32 mRNA sequence Length = 637 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 218 agatcttcgtcaaaaccctcaccggcaagaccatcacccttgaggt 263
>gb|AF268174.1|AF268174 Bovine viral diarrhea virus type 2 strain BVDV2-Ms St T4529c polyprotein gene, partial cds Length = 1908 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 1295 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 1340 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1067 agatcttcgtgaagaccctgaccggcaagaccatcaccct 1106
>ref|XM_579662.1| PREDICTED: Rattus norvegicus similar to polyubiquitin (LOC497709), partial mRNA Length = 160 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 68 agatctttgtgaagaccctgactggcaagaccatcaccctggaggt 113
>ref|XM_579409.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_017314 (LOC497684), mRNA Length = 2545 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2090 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2135 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1862 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1907 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1634 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1679 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1406 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1451 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1178 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1223 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 950 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 995 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 722 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 767 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 494 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 539 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 266 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 311 Score = 58.0 bits (29), Expect = 2e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcac 37 ||||||||||||||||||| || |||||||||||||| Sbjct: 2318 agatctttgtgaagaccctgacaggcaagaccatcac 2354 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 38 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 83
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0547A06 Length = 150922 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| ||||||||| |||||||||||||||| Sbjct: 110963 agatctttgtgaaaaccctgaccggcaagtccatcacccttgaggt 110918 Score = 36.2 bits (18), Expect = 6.4 Identities = 33/38 (86%) Strand = Plus / Minus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||| || ||||||| ||||||||||| ||||| Sbjct: 125856 gtgaagactctgaccggcatcaccatcaccctcgaggt 125819
>dbj|AK176953.1| Mus musculus cDNA, clone:Y0G0101B17, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000054250, based on BLAT search Length = 227 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 74 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 119
>gb|BC078726.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone IMAGE:7126996) Length = 409 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 7 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 52
>gb|AY891423.1| Synthetic construct Homo sapiens clone FLH017070.01L ubiquitin B (UBB) mRNA, partial cds Length = 690 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 5 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 50 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 233 agatcttcgtgaagaccctgaccggcaagaccatcaccct 272 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 461 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 506
>gb|AY888785.1| Synthetic construct Homo sapiens clone FLH017074.01X ubiquitin B (UBB) mRNA, complete cds Length = 690 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 5 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 50 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 233 agatcttcgtgaagaccctgaccggcaagaccatcaccct 272 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 461 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 506
>gb|AY888190.1| Synthetic construct Homo sapiens clone FLH021788.01X ubiquitin B (UBB) mRNA, complete cds Length = 690 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 5 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 50 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 233 agatcttcgtgaagaccctgaccggcaagaccatcaccct 272 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 461 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 506
>emb|Z54175.1|BVDTGACB1 Bovine viral diarrhea virus TGAC-B1 RNA Length = 984 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 578 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 623
>emb|Z54176.1|BVDCPA2 Bovine viral diarrhea virus cpA2 RNA Length = 984 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 578 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 623
>dbj|AB089620.1| Gorilla gorilla UbB gene for polyubiquitin B, complete cds Length = 690 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 5 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 50 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 461 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 506 Score = 56.0 bits (28), Expect = 7e-06 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| || ||||||||||||||||| Sbjct: 233 agatcttcgtgaagaccctgactggcaagaccatcaccct 272
>dbj|AB089619.1| Pan troglodytes UbB gene for polyubiquitin B, complete cds Length = 690 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 5 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 50 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 461 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 506 Score = 56.0 bits (28), Expect = 7e-06 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| || ||||||||||||||||| Sbjct: 233 agatcttcgtgaagaccctgactggcaagaccatcaccct 272
>dbj|AB089618.1| Pongo pygmaeus UbB gene for polyubiquitin B, complete cds Length = 690 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 461 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 506 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 233 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 278 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 5 agatcttcgtgaaaacccttactggcaagaccatcacccttgaggt 50
>dbj|AB089617.1| Homo sapiens UbB gene for polyubiquitin B, complete cds Length = 690 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 5 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 50 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 233 agatcttcgtgaagaccctgaccggcaagaccatcaccct 272 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 461 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 506
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0020B10 Length = 136175 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| ||||||||| |||||||||||||||| Sbjct: 23170 agatctttgtgaaaaccctgaccggcaagtccatcacccttgaggt 23125 Score = 36.2 bits (18), Expect = 6.4 Identities = 33/38 (86%) Strand = Plus / Minus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||| || ||||||| ||||||||||| ||||| Sbjct: 38063 gtgaagactctgaccggcatcaccatcaccctcgaggt 38026
>dbj|AK129498.1| Homo sapiens cDNA FLJ25987 fis, clone CBR05488, highly similar to Homo sapiens ubiquitin B (UBB) Length = 928 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 101 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 146 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 329 agatcttcgtgaagaccctgaccggcaagaccatcaccct 368 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 557 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 602
>gb|BC015127.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:24232 IMAGE:3929901), complete cds Length = 965 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 105 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 150 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 333 agatcttcgtgaagaccctgaccggcaagaccatcaccct 372 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 561 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 606
>gb|BC009301.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:16688 IMAGE:4126622), complete cds Length = 943 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 89 agatcttcgtgaaaacccttaccggcaagaccatcacccttgaggt 134 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 317 agatcttcgtgaagaccctgaccggcaagaccatcaccct 356 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 545 agatcttcgtgaagaccctgaccggcaagaccatcactctggaggt 590
>gb|BC089218.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone IMAGE:7312282), partial cds Length = 2083 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1596 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1641 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1368 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1413 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1140 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1185 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 912 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 957 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 684 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 729 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 456 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 501 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 228 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 273 Score = 65.9 bits (33), Expect = 7e-09 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1 gatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 45 Score = 58.0 bits (29), Expect = 2e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcac 37 ||||||||||||||||||| || |||||||||||||| Sbjct: 1824 agatctttgtgaagaccctgacaggcaagaccatcac 1860
>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence Length = 149454 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 4601 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 4556 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 4373 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 4328 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 4145 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 4100 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 3917 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 3872 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 3689 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 3644 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 3233 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 3188 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||||||||||||||| || ||||||||||||||||| Sbjct: 3005 agatctttgtgaagaccctgacaggcaagaccatcaccct 2966 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 3461 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 3416 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Minus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 4829 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 4784
>ref|NR_002875.1| Mus musculus gene model 1821, (NCBI) (Gm1821) on chromosome 14 Length = 704 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 333 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 378 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 105 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 150
>emb|X60390.1|CGPOLYUGE C.griseus gene for polyubiquitin Length = 1603 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 637 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 682 Score = 63.9 bits (32), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 183 atcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 226 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 1093 agatcttcgtgaagaccctgactggcaagaccatcaccctagaggt 1138 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||| |||||||||||||||||||| ||||| Sbjct: 873 gtgaagaccctgaccggcaagaccatcaccctagaggt 910 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 9 gtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||| |||||||||||||||||||| ||||| Sbjct: 417 gtgaagaccctgaccggcaagaccatcaccctagaggt 454
>gb|AF081142.1|AF081142 Cricetulus sp. ubiquitin/ribosomal protein CEP52 fusion protein mRNA, complete cds Length = 496 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 43 agatctttgtgaagaccctgacgggcaagaccatcactcttgaggt 88
>dbj|AB099044.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS12767 Length = 534 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 28 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 73 Score = 63.9 bits (32), Expect = 3e-08 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 256 agatcttcgtgaagaccctgaccggcaagaccatcaccct 295
>ref|NM_138895.1| Rattus norvegicus polyubiquitin (Ubb), mRNA Length = 1115 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 752 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 797 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 524 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 569 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 296 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 341 Score = 63.9 bits (32), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 70 atcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 113
>dbj|D16248.1|SOYUBI Glycine max Subi-1 gene for ubiquitin, complete cds Length = 4955 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 3092 agatcttcgtcaagaccctcaccggaaagaccatcacccttgaggt 3137 Score = 48.1 bits (24), Expect = 0.002 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcaccct 40 ||||||| || |||||||||||||||||||| || ||||| Sbjct: 3548 agatcttcgttaagaccctcaccggcaagactataaccct 3587
>gb|AY098526.1| Ananas comosus tetrameric ubiquitin mRNA, complete cds Length = 1199 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 727 agatcttcgtgaagaccctgaccggcaagaccatcaccctcgaggt 772 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| |||||||||||||||||||| ||||| Sbjct: 499 agatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggt 544 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| || |||||||| |||||||||||||||||||| ||||| Sbjct: 271 agatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggt 316 Score = 56.0 bits (28), Expect = 7e-06 Identities = 40/44 (90%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| || |||||||| |||||||||||||||||||| ||||| Sbjct: 45 atcttcgtcaagaccctgaccggcaagaccatcaccctcgaggt 88
>dbj|D16554.1|RATPOLYU Rattus norvegicus mRNA for polyubiquitin, complete cds, four repetitive ubiquitins in tandem Length = 1115 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 752 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 797 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 524 agatcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 569 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 296 agatcttcgtgaagaccctgaccggcaagaccatcaccctggaggt 341 Score = 63.9 bits (32), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Plus Query: 3 atctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 70 atcttcgtgaagaccctgaccggcaagaccatcaccctagaggt 113
>dbj|D17296.1|RATPILP Rattus norvegicus mRNA for polyubiquitin, complete cds, ten completely repetitive ubiquitins in tandem and one ubiguitin-like protein Length = 2545 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2090 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2135 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1862 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1907 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1634 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1679 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1406 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1451 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1178 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1223 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 950 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 995 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 722 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 767 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 494 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 539 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 266 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 311 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 2318 agatctttgtgaagaccctgacaggcaagaccatcactctggaggt 2363 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 38 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 83
>gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 Score = 67.9 bits (34), Expect = 2e-09 Identities = 37/38 (97%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggttga 49 ||||||||||| |||||||||||||||||||||||||| Sbjct: 3704 aagaccctcactggcaagaccatcacccttgaggttga 3741 Score = 63.9 bits (32), Expect = 3e-08 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||| || || ||||||||||||||||||||||||||||| ||||| Sbjct: 4605 agatyttcgtcaagaccctcaccggcaagaccatcaccctggaggt 4650 Score = 61.9 bits (31), Expect = 1e-07 Identities = 34/35 (97%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||||||||||||| ||||| Sbjct: 4388 aagaccctcaccggcaagaccatcaccctggaggt 4422 Score = 52.0 bits (26), Expect = 1e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||| || ||||||||||| ||||||||||||||| Sbjct: 4149 agatcttcgtcaagaccctcactggcaagaccatcacc 4186 Score = 46.1 bits (23), Expect = 0.007 Identities = 32/35 (91%) Strand = Plus / Plus Query: 12 aagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||| |||||||| ||||| |||||||| Sbjct: 3932 aagaccctcactggcaagactatcacgcttgaggt 3966
>gb|U29159.1|ZMU29159 Zea mays clone MubG1 ubiquitin gene, complete cds Length = 4190 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 |||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 3259 agatctttgtgaagacactcactggcaagacaatcacccttgaggt 3304 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 3031 agatctttgtgaaaaccctgaccggcaagactatcaccctcgaggt 3076 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||| ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 2803 agatcttcgtgaagaccctgaccggcaagactatcaccctcgaggt 2848 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | ||||||||||| |||||||| ||||| Sbjct: 2575 agatctttgtgaaaaccttgaccggcaagactatcaccctcgaggt 2620 Score = 52.0 bits (26), Expect = 1e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| || |||||||| |||||||| ||||| Sbjct: 2347 agatctttgtgaaaaccctgactggcaagactatcaccctcgaggt 2392 Score = 36.2 bits (18), Expect = 6.4 Identities = 33/38 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 |||| ||||||||||| | || ||||||||||||||| Sbjct: 3487 agatttttgtgaagacattgactggcaagaccatcacc 3524
>ref|NM_019639.3| Mus musculus ubiquitin C (Ubc), mRNA Length = 2779 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 2322 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2367 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1866 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1911 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1638 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1683 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 1182 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1227 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 726 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 771 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 498 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 543 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 270 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 315 Score = 60.0 bits (30), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacc 38 ||||||||||||||||||| || ||||||||||||||| Sbjct: 2550 agatctttgtgaagaccctgacaggcaagaccatcacc 2587 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 2094 agatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 2139 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| || ||||||||||||||||| ||||| Sbjct: 1410 agatctttgtgaaaaccctgacaggcaagaccatcaccctggaggt 1455 Score = 60.0 bits (30), Expect = 4e-07 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||||| || ||||||||||||||||| ||||| Sbjct: 954 agatctttgtgaaaaccctgacaggcaagaccatcaccctggaggt 999 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 42 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 87
>gb|BC103477.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone MGC:124622 IMAGE:7929586), complete cds Length = 1501 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 975 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1020 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 747 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 792 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 519 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 564 Score = 67.9 bits (34), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 291 agatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 336 Score = 58.0 bits (29), Expect = 2e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcac 37 ||||||||||||||||||| || |||||||||||||| Sbjct: 1203 agatctttgtgaagaccctgacaggcaagaccatcac 1239 Score = 44.1 bits (22), Expect = 0.026 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 46 ||||||||||||| ||| | || || |||||||||||||| ||||| Sbjct: 63 agatctttgtgaaaaccttaactggtaagaccatcaccctggaggt 108 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 299,689 Number of Sequences: 3902068 Number of extensions: 299689 Number of successful extensions: 80912 Number of sequences better than 10.0: 1662 Number of HSP's better than 10.0 without gapping: 1609 Number of HSP's successfully gapped in prelim test: 56 Number of HSP's that attempted gapping in prelim test: 76245 Number of HSP's gapped (non-prelim): 4719 length of query: 49 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 29 effective length of database: 17,155,003,908 effective search space: 497495113332 effective search space used: 497495113332 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
